I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 10 15:52:12 +14 2025 I: pbuilder-time-stamp: 1765331532 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cctbx_2024.8+ds2+~3.21.1+ds1-3.dsc] I: copying [./cctbx_2024.8+ds2+~3.21.1+ds1.orig-dxtbx.tar.xz] I: copying [./cctbx_2024.8+ds2+~3.21.1+ds1.orig.tar.xz] I: copying [./cctbx_2024.8+ds2+~3.21.1+ds1-3.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Oct 1 18:50:48 2024 gpgv: using RSA key B415360F591EB6DD73AFFB83D30DECD2599322FC gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cctbx_2024.8+ds2+~3.21.1+ds1-3.dsc: no acceptable signature found dpkg-source: info: extracting cctbx in cctbx-2024.8+ds2+~3.21.1+ds1 dpkg-source: info: unpacking cctbx_2024.8+ds2+~3.21.1+ds1.orig.tar.xz dpkg-source: info: unpacking cctbx_2024.8+ds2+~3.21.1+ds1.orig-dxtbx.tar.xz dpkg-source: info: unpacking cctbx_2024.8+ds2+~3.21.1+ds1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying workaround_env_config.patch dpkg-source: info: applying boost_adaptbx.patch dpkg-source: info: applying reproducible-timestamp.patch dpkg-source: info: applying libtbx_env-per-python-version.patch dpkg-source: info: applying iotbx_with_system_libraries.patch dpkg-source: info: applying 0007-iotbx-mtz-load-ccp4-data-from-the-right-directory.patch dpkg-source: info: applying 0009-scons-soname.patch dpkg-source: info: applying 0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch dpkg-source: info: applying 0011-dxtbx-use-the-system-libraries.patch dpkg-source: info: applying 0013-dxtbx-do-not-modify-the-HDF5_PLUGIN_PATH.patch dpkg-source: info: applying 0015-dxtbx-adapte-the-boost_python-link-name.patch dpkg-source: info: applying 0016-cctbx-avoid-FTBFS-when-cctbx-is-already-installed.patch dpkg-source: info: applying 0017-cctbx-do-not-hide-sign-comparison.patch dpkg-source: info: applying 0017-dxtbx-fix-for-unsigned-char-arch.patch dpkg-source: info: applying 0016-unactivated-ucif-compilation.patch dpkg-source: info: applying 0017-smtbx-save-the-generated-test-file-under-tmp.patch dpkg-source: info: applying 0018-iotbx-link-with-ccp4c-instead-of-ccp4io.patch dpkg-source: info: applying 0019-cbflib_adapter-link-cbf-private-with-cbf.patch dpkg-source: info: applying 0020-spotfinder-link-with-dxtbxspotfinder.patch dpkg-source: info: applying 0021-rstbx-link-with-ann_adaptor.patch dpkg-source: info: applying 0022-rstbx-link-rstbx_integration_ext-with-ann_adaptor.patch dpkg-source: info: applying 0023-rstbx-use-the-annself_excluded-namespace-from-ann-cc.patch dpkg-source: info: applying 0024-more-ann-ann-cctbx.patch dpkg-source: info: applying 0031-Add-missing-ctdint-header.patch dpkg-source: info: applying 0032-no-future.patch dpkg-source: info: applying 0026-remove-distutils-in-some-modules.patch dpkg-source: info: applying 0027-Replace-unmaintained-orderedset-with-ordered_set.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 10 01:52 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=66ec01edd203477397244e1751abcd3b LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2343100 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IMnb1PH0/pbuilderrc_bNlM --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IMnb1PH0/b2 --logfile b2/build.log cctbx_2024.8+ds2+~3.21.1+ds1-3.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-hdf5plugin, python3-matplotlib, python3-mrcfile, python3-msgpack, python3-natsort, python3-numpy, python3-nxmx, python3-ordered-set, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20089 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however: Package architecture-is-64-bit is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-numpy3; however: Package dh-sequence-numpy3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on jq; however: Package jq is not installed. pbuilder-satisfydepends-dummy depends on libann-cctbx-dev (>= 1.1.2+doc-9~); however: Package libann-cctbx-dev is not installed. pbuilder-satisfydepends-dummy depends on libantlr3c-dev; however: Package libantlr3c-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-numpy-dev; however: Package libboost-numpy-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-python-dev; however: Package libboost-python-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libcbf-dev (>= 0.9.7+dfsg1-2~); however: Package libcbf-dev is not installed. pbuilder-satisfydepends-dummy depends on libclipper-dev; however: Package libclipper-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev; however: Package libexpat1-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgl-dev; however: Package libgl-dev is not installed. pbuilder-satisfydepends-dummy depends on libglu1-mesa-dev; however: Package libglu1-mesa-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on liblz4-dev; however: Package liblz4-dev is not installed. pbuilder-satisfydepends-dummy depends on libssm-dev; however: Package libssm-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev; however: Package libtiff-dev is not installed. pbuilder-satisfydepends-dummy depends on libtool; however: Package libtool is not installed. pbuilder-satisfydepends-dummy depends on pybind11-dev; however: Package pybind11-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 3); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-hdf5plugin; however: Package python3-hdf5plugin is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-mrcfile; however: Package python3-mrcfile is not installed. pbuilder-satisfydepends-dummy depends on python3-msgpack; however: Package python3-msgpack is not installed. pbuilder-satisfydepends-dummy depends on python3-natsort; however: Package python3-natsort is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-nxmx; however: Package python3-nxmx is not installed. pbuilder-satisfydepends-dummy depends on python3-ordered-set; however: Package python3-ordered-set is not installed. pbuilder-satisfydepends-dummy depends on python3-pint; however: Package python3-pint is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-procrunner; however: Package python3-procrunner is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pycbf (>= 0.9.7+dfsg1-2~); however: Package python3-pycbf is not installed. pbuilder-satisfydepends-dummy depends on python3-pymol; however: Package python3-pymol is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-six; however: Package python3-six is not installed. pbuilder-satisfydepends-dummy depends on python3-tqdm; however: Package python3-tqdm is not installed. pbuilder-satisfydepends-dummy depends on python3-wxgtk4.0; however: Package python3-wxgtk4.0 is not installed. pbuilder-satisfydepends-dummy depends on rsync; however: Package rsync is not installed. pbuilder-satisfydepends-dummy depends on scons; however: Package scons is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} architecture-properties{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} fftw-dev{a} fftw2{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} ibverbs-providers{a} intltool-debian{a} jq{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libann-cctbx-dev{a} libann-cctbx0{a} libantlr3c-3.4-0{a} libantlr3c-dev{a} libapparmor1{a} libarchive-zip-perl{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libcairo-gobject2{a} libcairo2{a} libcbf-dev{a} libcbf1t64{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libclipper-dev{a} libclipper2{a} libcloudproviders0{a} libcolord2{a} libcom-err2{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libepoxy0{a} libevdev2{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglew2.2{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgtk-3-0t64{a} libgtk-3-common{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs1{a} libice6{a} libicu72{a} libidn2-dev{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjq1{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc-dev{a} liblerc4{a} libllvm17t64{a} libllvm19{a} liblz4-dev{a} liblzf1{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmmdb2-0{a} libmmdb2-dev{a} libmtdev1t64{a} libmunge2{a} libnetcdf19t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnl-3-200{a} libnl-route-3-200{a} libnotify4{a} libnsl2{a} libnuma1{a} libonig5{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libopenmpi3t64{a} libp11-kit-dev{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix2t64{a} libpng16-16t64{a} libpopt0{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} libraqm0{a} librdmacm1t64{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libssm-dev{a} libssm2{a} libsystemd-shared{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libunbound8{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libwxbase3.2-1t64{a} libwxgtk-gl3.2-1t64{a} libwxgtk3.2-1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxft2{a} libxi6{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxnvctrl0{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybind11-dev{a} pymol-data{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-biopython{a} python3-brotli{a} python3-cairo{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-flexcache{a} python3-flexparser{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdf5plugin{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-mrcfile{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-nxmx{a} python3-opengl{a} python3-ordered-set{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pint{a} python3-pip{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-procrunner{a} python3-psutil{a} python3-pycbf{a} python3-pymol{a} python3-pyparsing{a} python3-pyqt5{a} python3-pyqt5.qtopengl{a} python3-pyqt5.sip{a} python3-pytest{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sympy{a} python3-tk{a} python3-tqdm{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wheel{a} python3-wxgtk4.0{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} rsync{a} scons{a} sensible-utils{a} sfftw-dev{a} sfftw2{a} sgml-base{a} shared-mime-info{a} sphinx-rtd-theme-common{a} systemd{a} systemd-sysv{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} w3c-sgml-lib{a} x11-common{a} x11proto-dev{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core chrony curl fonts-dejavu-extra hdf5-filter-plugin hdf5-filter-plugin-blosc-serial hdf5-filter-plugin-zfp-serial hdf5-plugin-lzf isympy-common javascript-common krb5-locales libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data libglut-dev libgtk-3-bin libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 librsvg2-common libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mesa-vulkan-drivers ncbi-blast+ ntpsec openntpd psmisc publicsuffix python-biopython-doc python3-bs4 python3-cssselect python3-html5lib python3-olefile python3-pygments qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 489 newly installed, 0 to remove and 0 not upgraded. Need to get 308 MB of archives. After unpacking 1525 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libapparmor1 arm64 3.1.7-1+b2 [41.8 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libsystemd-shared arm64 256.7-3 [1841 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 systemd arm64 256.7-3 [3259 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 systemd-sysv arm64 256.7-3 [58.7 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libdbus-1-3 arm64 1.14.10-6 [196 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 dbus-bin arm64 1.14.10-6 [105 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.3-2 [90.1 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 dbus-daemon arm64 1.14.10-6 [178 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 dbus arm64 1.14.10-6 [97.4 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 fonts-lato all 2.015-1 [2780 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 libpython3.12-minimal arm64 3.12.6-1 [806 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 python3.12-minimal arm64 3.12.6-1 [1935 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 python3-minimal arm64 3.12.6-1 [26.7 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 media-types all 10.1.0 [26.9 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 tzdata all 2024a-4 [255 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 libpython3.12-stdlib arm64 3.12.6-1 [1898 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 python3.12 arm64 3.12.6-1 [669 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libpython3-stdlib arm64 3.12.6-1 [9692 B] Get: 33 http://deb.debian.org/debian trixie/main arm64 python3 arm64 3.12.6-1 [27.8 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libpopt0 arm64 1.19+dfsg-2 [42.8 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 rsync arm64 3.3.0-1+b1 [403 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 sgml-base all 1.31 [15.4 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 openssl arm64 3.3.2-2 [1347 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 ca-certificates all 20240203 [158 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 libpam-systemd arm64 256.7-3 [260 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-9 [96.6 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 libglib2.0-0t64 arm64 2.82.2-2 [1409 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.1 [630 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 shared-mime-info arm64 2.4-5+b1 [755 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 liblerc4 arm64 4.0.0+ds-4+b2 [154 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 libsharpyuv0 arm64 1.4.0-0.1+b1 [112 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 libwebp7 arm64 1.4.0-0.1+b1 [268 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1+b1 [131 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 gtk-update-icon-cache arm64 4.16.3+ds-2 [49.7 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 architecture-properties arm64 0.2.3 [2184 B] Get: 70 http://deb.debian.org/debian trixie/main arm64 at-spi2-common all 2.54.0-1 [170 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 73 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 74 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 75 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 76 http://deb.debian.org/debian trixie/main arm64 libtcl8.6 arm64 8.6.15+dfsg-2 [982 kB] Get: 77 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b5 [296 kB] Get: 78 http://deb.debian.org/debian trixie/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 79 http://deb.debian.org/debian trixie/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 80 http://deb.debian.org/debian trixie/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 libfontenc1 arm64 1:1.1.8-1+b1 [22.5 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 x11-common all 1:7.7+23.1 [216 kB] Get: 83 http://deb.debian.org/debian trixie/main arm64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 84 http://deb.debian.org/debian trixie/main arm64 xfonts-utils arm64 1:7.7+7 [89.3 kB] Get: 85 http://deb.debian.org/debian trixie/main arm64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 86 http://deb.debian.org/debian trixie/main arm64 fontconfig-config arm64 2.15.0-1.1+b1 [318 kB] Get: 87 http://deb.debian.org/debian trixie/main arm64 libfontconfig1 arm64 2.15.0-1.1+b1 [387 kB] Get: 88 http://deb.debian.org/debian trixie/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 89 http://deb.debian.org/debian trixie/main arm64 libxdmcp6 arm64 1:1.1.2-3+b2 [24.4 kB] Get: 90 http://deb.debian.org/debian trixie/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 91 http://deb.debian.org/debian trixie/main arm64 libx11-data all 2:1.8.7-1 [328 kB] Get: 92 http://deb.debian.org/debian trixie/main arm64 libx11-6 arm64 2:1.8.7-1+b1 [775 kB] Get: 93 http://deb.debian.org/debian trixie/main arm64 libxrender1 arm64 1:0.9.10-1.1+b2 [27.2 kB] Get: 94 http://deb.debian.org/debian trixie/main arm64 libxft2 arm64 2.3.6-1+b2 [51.6 kB] Get: 95 http://deb.debian.org/debian trixie/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB] Get: 96 http://deb.debian.org/debian trixie/main arm64 libxss1 arm64 1:1.2.3-1+b2 [17.1 kB] Get: 97 http://deb.debian.org/debian trixie/main arm64 libtk8.6 arm64 8.6.15-1 [738 kB] Get: 98 http://deb.debian.org/debian trixie/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7+b1 [538 kB] Get: 99 http://deb.debian.org/debian trixie/main arm64 blt arm64 2.5.3+dfsg-7+b1 [6344 B] Get: 100 http://deb.debian.org/debian trixie/main arm64 dbus-user-session arm64 1.14.10-6 [79.0 kB] Get: 101 http://deb.debian.org/debian trixie/main arm64 libdconf1 arm64 0.40.0-4+b3 [40.4 kB] Get: 102 http://deb.debian.org/debian trixie/main arm64 dconf-service arm64 0.40.0-4+b3 [31.1 kB] Get: 103 http://deb.debian.org/debian trixie/main arm64 dconf-gsettings-backend arm64 0.40.0-4+b3 [27.4 kB] Get: 104 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 105 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 106 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 107 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 108 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 109 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 110 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 111 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 112 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 113 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 114 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 115 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 116 http://deb.debian.org/debian trixie/main arm64 dh-exec arm64 0.30+b1 [25.8 kB] Get: 117 http://deb.debian.org/debian trixie/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 118 http://deb.debian.org/debian trixie/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 119 http://deb.debian.org/debian trixie/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 120 http://deb.debian.org/debian trixie/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 121 http://deb.debian.org/debian trixie/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 122 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 123 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 124 http://deb.debian.org/debian trixie/main arm64 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 125 http://deb.debian.org/debian trixie/main arm64 python3-zipp all 3.20.2-1 [10.3 kB] Get: 126 http://deb.debian.org/debian trixie/main arm64 python3-setuptools all 74.1.2-2 [736 kB] Get: 127 http://deb.debian.org/debian trixie/main arm64 dh-python all 6.20241024 [109 kB] Get: 128 http://deb.debian.org/debian trixie/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Get: 129 http://deb.debian.org/debian trixie/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Get: 130 http://deb.debian.org/debian trixie/main arm64 libnl-3-200 arm64 3.7.0-0.3+b1 [57.0 kB] Get: 131 http://deb.debian.org/debian trixie/main arm64 libnl-route-3-200 arm64 3.7.0-0.3+b1 [167 kB] Get: 132 http://deb.debian.org/debian trixie/main arm64 libibverbs1 arm64 52.0-2+b1 [58.8 kB] Get: 133 http://deb.debian.org/debian trixie/main arm64 ibverbs-providers arm64 52.0-2+b1 [321 kB] Get: 134 http://deb.debian.org/debian trixie/main arm64 librdmacm1t64 arm64 52.0-2+b1 [67.4 kB] Get: 135 http://deb.debian.org/debian trixie/main arm64 libfabric1 arm64 1.17.0-3.1 [480 kB] Get: 136 http://deb.debian.org/debian trixie/main arm64 libhwloc15 arm64 2.11.2-1 [141 kB] Get: 137 http://deb.debian.org/debian trixie/main arm64 libmunge2 arm64 0.5.15-4+b1 [19.4 kB] Get: 138 http://deb.debian.org/debian trixie/main arm64 libpciaccess0 arm64 0.17-3+b2 [51.2 kB] Get: 139 http://deb.debian.org/debian trixie/main arm64 libxnvctrl0 arm64 535.171.04-1+b1 [14.1 kB] Get: 140 http://deb.debian.org/debian trixie/main arm64 ocl-icd-libopencl1 arm64 2.3.2-1+b2 [39.3 kB] Get: 141 http://deb.debian.org/debian trixie/main arm64 libhwloc-plugins arm64 2.11.2-1 [17.9 kB] Get: 142 http://deb.debian.org/debian trixie/main arm64 libpmix2t64 arm64 5.0.3-2+b1 [588 kB] Get: 143 http://deb.debian.org/debian trixie/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB] Get: 144 http://deb.debian.org/debian trixie/main arm64 libz3-4 arm64 4.8.12-3.1+b3 [6832 kB] Get: 145 http://deb.debian.org/debian trixie/main arm64 libllvm17t64 arm64 1:17.0.6-18 [21.3 MB] Get: 146 http://deb.debian.org/debian trixie/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Get: 147 http://deb.debian.org/debian trixie/main arm64 libdrm-common all 2.4.123-1 [8084 B] Get: 148 http://deb.debian.org/debian trixie/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB] Get: 149 http://deb.debian.org/debian trixie/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB] Get: 150 http://deb.debian.org/debian trixie/main arm64 libnuma1 arm64 2.0.18-1+b1 [21.8 kB] Get: 151 http://deb.debian.org/debian trixie/main arm64 libhsakmt1 arm64 5.7.0-1 [57.6 kB] Get: 152 http://deb.debian.org/debian trixie/main arm64 libhsa-runtime64-1 arm64 5.7.1-3 [278 kB] Get: 153 http://deb.debian.org/debian trixie/main arm64 libamdhip64-5 arm64 5.7.1-5 [8823 kB] Get: 154 http://deb.debian.org/debian trixie/main arm64 libibumad3 arm64 52.0-2+b1 [27.1 kB] Get: 155 http://deb.debian.org/debian trixie/main arm64 libibmad5 arm64 52.0-2+b1 [41.5 kB] Get: 156 http://deb.debian.org/debian trixie/main arm64 libucx0 arm64 1.17.0+ds-3 [959 kB] Get: 157 http://deb.debian.org/debian trixie/main arm64 libopenmpi3t64 arm64 4.1.6-13.3 [2170 kB] Get: 158 http://deb.debian.org/debian trixie/main arm64 fftw2 arm64 2.1.5-7 [202 kB] Get: 159 http://deb.debian.org/debian trixie/main arm64 fftw-dev arm64 2.1.5-7 [242 kB] Get: 160 http://deb.debian.org/debian trixie/main arm64 fontconfig arm64 2.15.0-1.1+b1 [463 kB] Get: 161 http://deb.debian.org/debian trixie/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 162 http://deb.debian.org/debian trixie/main arm64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 163 http://deb.debian.org/debian trixie/main arm64 hdf5-helpers arm64 1.10.10+repack-4 [23.5 kB] Get: 164 http://deb.debian.org/debian trixie/main arm64 libonig5 arm64 6.9.9-1+b1 [181 kB] Get: 165 http://deb.debian.org/debian trixie/main arm64 libjq1 arm64 1.7.1-3+b1 [148 kB] Get: 166 http://deb.debian.org/debian trixie/main arm64 jq arm64 1.7.1-3+b1 [77.3 kB] Get: 167 http://deb.debian.org/debian trixie/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 168 http://deb.debian.org/debian trixie/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 169 http://deb.debian.org/debian trixie/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB] Get: 170 http://deb.debian.org/debian trixie/main arm64 libann-cctbx0 arm64 1.1.2+doc-9+b2 [30.8 kB] Get: 171 http://deb.debian.org/debian trixie/main arm64 libann-cctbx-dev arm64 1.1.2+doc-9+b2 [43.6 kB] Get: 172 http://deb.debian.org/debian trixie/main arm64 libantlr3c-3.4-0 arm64 3.4+dfsg-4+b2 [47.9 kB] Get: 173 http://deb.debian.org/debian trixie/main arm64 libantlr3c-dev arm64 3.4+dfsg-4+b2 [131 kB] Get: 174 http://deb.debian.org/debian trixie/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [49.7 kB] Get: 175 http://deb.debian.org/debian trixie/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB] Get: 176 http://deb.debian.org/debian trixie/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [72.9 kB] Get: 177 http://deb.debian.org/debian trixie/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [64.4 kB] Get: 178 http://deb.debian.org/debian trixie/main arm64 libavahi-common-data arm64 0.8-13+b3 [112 kB] Get: 179 http://deb.debian.org/debian trixie/main arm64 libavahi-common3 arm64 0.8-13+b3 [42.3 kB] Get: 180 http://deb.debian.org/debian trixie/main arm64 libavahi-client3 arm64 0.8-13+b3 [46.0 kB] Get: 181 http://deb.debian.org/debian trixie/main arm64 libblas3 arm64 3.12.0-3+b1 [98.9 kB] Get: 182 http://deb.debian.org/debian trixie/main arm64 libboost1.83-dev arm64 1.83.0-3.2 [10.6 MB] Get: 183 http://deb.debian.org/debian trixie/main arm64 libboost-atomic1.83.0 arm64 1.83.0-3.2 [233 kB] Get: 184 http://deb.debian.org/debian trixie/main arm64 libboost-atomic1.83-dev arm64 1.83.0-3.2 [234 kB] Get: 185 http://deb.debian.org/debian trixie/main arm64 libboost-chrono1.83.0t64 arm64 1.83.0-3.2 [239 kB] Get: 186 http://deb.debian.org/debian trixie/main arm64 libboost-chrono1.83-dev arm64 1.83.0-3.2 [245 kB] Get: 187 http://deb.debian.org/debian trixie/main arm64 libboost-date-time1.83.0 arm64 1.83.0-3.2 [230 kB] Get: 188 http://deb.debian.org/debian trixie/main arm64 libboost-serialization1.83.0 arm64 1.83.0-3.2 [325 kB] Get: 189 http://deb.debian.org/debian trixie/main arm64 libboost-serialization1.83-dev arm64 1.83.0-3.2 [373 kB] Get: 190 http://deb.debian.org/debian trixie/main arm64 libboost-date-time1.83-dev arm64 1.83.0-3.2 [239 kB] Get: 191 http://deb.debian.org/debian trixie/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get: 192 http://deb.debian.org/debian trixie/main arm64 libboost-python1.83.0 arm64 1.83.0-3.2 [296 kB] Get: 193 http://deb.debian.org/debian trixie/main arm64 libboost-numpy1.83.0 arm64 1.83.0-3.2 [240 kB] Get: 194 http://deb.debian.org/debian trixie/main arm64 libboost-numpy1.83-dev arm64 1.83.0-3.2 [245 kB] Get: 195 http://deb.debian.org/debian trixie/main arm64 libboost-numpy-dev arm64 1.83.0.2+b2 [3632 B] Get: 196 http://deb.debian.org/debian trixie/main arm64 libpython3.12t64 arm64 3.12.6-1 [1981 kB] Get: 197 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.6.3-2 [142 kB] Get: 198 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 199 http://deb.debian.org/debian trixie/main arm64 libpython3.12-dev arm64 3.12.6-1 [4782 kB] Get: 200 http://deb.debian.org/debian trixie/main arm64 libpython3-dev arm64 3.12.6-1 [9952 B] Get: 201 http://deb.debian.org/debian trixie/main arm64 python3.12-dev arm64 3.12.6-1 [506 kB] Get: 202 http://deb.debian.org/debian trixie/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 203 http://deb.debian.org/debian trixie/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 204 http://deb.debian.org/debian trixie/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 205 http://deb.debian.org/debian trixie/main arm64 python3-dev arm64 3.12.6-1 [26.1 kB] Get: 206 http://deb.debian.org/debian trixie/main arm64 libboost-python1.83-dev arm64 1.83.0-3.2 [321 kB] Get: 207 http://deb.debian.org/debian trixie/main arm64 libboost-python-dev arm64 1.83.0.2+b2 [3880 B] Get: 208 http://deb.debian.org/debian trixie/main arm64 libboost-system1.83.0 arm64 1.83.0-3.2 [230 kB] Get: 209 http://deb.debian.org/debian trixie/main arm64 libboost-system1.83-dev arm64 1.83.0-3.2 [231 kB] Get: 210 http://deb.debian.org/debian trixie/main arm64 libboost-thread1.83.0 arm64 1.83.0-3.2 [265 kB] Get: 211 http://deb.debian.org/debian trixie/main arm64 libboost-thread1.83-dev arm64 1.83.0-3.2 [276 kB] Get: 212 http://deb.debian.org/debian trixie/main arm64 libboost-thread-dev arm64 1.83.0.2+b2 [3616 B] Get: 213 http://deb.debian.org/debian trixie/main arm64 libboost-timer1.83.0 arm64 1.83.0-3.2 [234 kB] Get: 214 http://deb.debian.org/debian trixie/main arm64 libboost-timer1.83-dev arm64 1.83.0-3.2 [236 kB] Get: 215 http://deb.debian.org/debian trixie/main arm64 libboost-timer-dev arm64 1.83.0.2+b2 [3712 B] Get: 216 http://deb.debian.org/debian trixie/main arm64 libbrotli-dev arm64 1.1.0-2+b5 [308 kB] Get: 217 http://deb.debian.org/debian trixie/main arm64 libpixman-1-0 arm64 0.42.2-1+b1 [477 kB] Get: 218 http://deb.debian.org/debian trixie/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Get: 219 http://deb.debian.org/debian trixie/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Get: 220 http://deb.debian.org/debian trixie/main arm64 libcairo2 arm64 1.18.2-2 [483 kB] Get: 221 http://deb.debian.org/debian trixie/main arm64 libcairo-gobject2 arm64 1.18.2-2 [130 kB] Get: 222 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 223 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 224 http://deb.debian.org/debian trixie/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 225 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 226 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 227 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 228 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 229 http://deb.debian.org/debian trixie/main arm64 libcurl4t64 arm64 8.10.1-2 [322 kB] Get: 230 http://deb.debian.org/debian trixie/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB] Get: 231 http://deb.debian.org/debian trixie/main arm64 libcbf1t64 arm64 0.9.7+dfsg1-4 [332 kB] Get: 232 http://deb.debian.org/debian trixie/main arm64 libgfortran5 arm64 14.2.0-6 [361 kB] Get: 233 http://deb.debian.org/debian trixie/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-4 [88.1 kB] Get: 234 http://deb.debian.org/debian trixie/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB] Get: 235 http://deb.debian.org/debian trixie/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.0 kB] Get: 236 http://deb.debian.org/debian trixie/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB] Get: 237 http://deb.debian.org/debian trixie/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB] Get: 238 http://deb.debian.org/debian trixie/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB] Get: 239 http://deb.debian.org/debian trixie/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB] Get: 240 http://deb.debian.org/debian trixie/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB] Get: 241 http://deb.debian.org/debian trixie/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get: 242 http://deb.debian.org/debian trixie/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get: 243 http://deb.debian.org/debian trixie/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Get: 244 http://deb.debian.org/debian trixie/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB] Get: 245 http://deb.debian.org/debian trixie/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Get: 246 http://deb.debian.org/debian trixie/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 247 http://deb.debian.org/debian trixie/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB] Get: 248 http://deb.debian.org/debian trixie/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 249 http://deb.debian.org/debian trixie/main arm64 libunbound8 arm64 1.22.0-1 [553 kB] Get: 250 http://deb.debian.org/debian trixie/main arm64 libgnutls-dane0t64 arm64 3.8.6-2+b1 [437 kB] Get: 251 http://deb.debian.org/debian trixie/main arm64 libgnutls-openssl27t64 arm64 3.8.6-2+b1 [437 kB] Get: 252 http://deb.debian.org/debian trixie/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB] Get: 253 http://deb.debian.org/debian trixie/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB] Get: 254 http://deb.debian.org/debian trixie/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB] Get: 255 http://deb.debian.org/debian trixie/main arm64 libgnutls28-dev arm64 3.8.6-2+b1 [1398 kB] Get: 256 http://deb.debian.org/debian trixie/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB] Get: 257 http://deb.debian.org/debian trixie/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB] Get: 258 http://deb.debian.org/debian trixie/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Get: 259 http://deb.debian.org/debian trixie/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB] Get: 260 http://deb.debian.org/debian trixie/main arm64 libcurl4-openssl-dev arm64 8.10.1-2 [447 kB] Get: 261 http://deb.debian.org/debian trixie/main arm64 libhdf5-dev arm64 1.10.10+repack-4 [2697 kB] Get: 262 http://deb.debian.org/debian trixie/main arm64 libcbf-dev arm64 0.9.7+dfsg1-4 [438 kB] Get: 263 http://deb.debian.org/debian trixie/main arm64 libccp4-data all 8.0.0-4 [62.7 kB] Get: 264 http://deb.debian.org/debian trixie/main arm64 libccp4c0t64 arm64 8.0.0-4 [83.1 kB] Get: 265 http://deb.debian.org/debian trixie/main arm64 libmmdb2-0 arm64 2.0.22-1+b2 [309 kB] Get: 266 http://deb.debian.org/debian trixie/main arm64 libccp4f0t64 arm64 8.0.0-4 [175 kB] Get: 267 http://deb.debian.org/debian trixie/main arm64 libccp4-dev arm64 8.0.0-4 [42.9 kB] Get: 268 http://deb.debian.org/debian trixie/main arm64 sfftw2 arm64 2.1.5-7 [203 kB] Get: 269 http://deb.debian.org/debian trixie/main arm64 libclipper2 arm64 2.1.20201109-2+b3 [1102 kB] Get: 270 http://deb.debian.org/debian trixie/main arm64 libmmdb2-dev arm64 2.0.22-1+b2 [92.9 kB] Get: 271 http://deb.debian.org/debian trixie/main arm64 sfftw-dev arm64 2.1.5-7 [243 kB] Get: 272 http://deb.debian.org/debian trixie/main arm64 libclipper-dev arm64 2.1.20201109-2+b3 [82.4 kB] Get: 273 http://deb.debian.org/debian trixie/main arm64 libcloudproviders0 arm64 0.3.6-1+b1 [27.7 kB] Get: 274 http://deb.debian.org/debian trixie/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Get: 275 http://deb.debian.org/debian trixie/main arm64 libcolord2 arm64 1.4.7-1+b2 [130 kB] Get: 276 http://deb.debian.org/debian trixie/main arm64 libcups2t64 arm64 2.4.10-2 [235 kB] Get: 277 http://deb.debian.org/debian trixie/main arm64 libnghttp3-9 arm64 1.4.0-1+b1 [59.6 kB] Get: 278 http://deb.debian.org/debian trixie/main arm64 libngtcp2-16 arm64 1.6.0-1 [112 kB] Get: 279 http://deb.debian.org/debian trixie/main arm64 libngtcp2-crypto-gnutls8 arm64 1.6.0-1 [18.5 kB] Get: 280 http://deb.debian.org/debian trixie/main arm64 libcurl3t64-gnutls arm64 8.10.1-2 [328 kB] Get: 281 http://deb.debian.org/debian trixie/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB] Get: 282 http://deb.debian.org/debian trixie/main arm64 libdeflate-dev arm64 1.22-1 [51.2 kB] Get: 283 http://deb.debian.org/debian trixie/main arm64 libdouble-conversion3 arm64 3.3.0-1+b2 [37.3 kB] Get: 284 http://deb.debian.org/debian trixie/main arm64 libdrm-radeon1 arm64 2.4.123-1 [21.3 kB] Get: 285 http://deb.debian.org/debian trixie/main arm64 libwayland-server0 arm64 1.23.0-1+b1 [33.4 kB] Get: 286 http://deb.debian.org/debian trixie/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB] Get: 287 http://deb.debian.org/debian trixie/main arm64 libglapi-mesa arm64 24.2.4-1 [48.2 kB] Get: 288 http://deb.debian.org/debian trixie/main arm64 libllvm19 arm64 1:19.1.2-2 [23.3 MB] Get: 289 http://deb.debian.org/debian trixie/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 290 http://deb.debian.org/debian trixie/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB] Get: 291 http://deb.debian.org/debian trixie/main arm64 libx11-xcb1 arm64 2:1.8.7-1+b1 [232 kB] Get: 292 http://deb.debian.org/debian trixie/main arm64 libxcb-dri2-0 arm64 1.17.0-2+b1 [107 kB] Get: 293 http://deb.debian.org/debian trixie/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB] Get: 294 http://deb.debian.org/debian trixie/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB] Get: 295 http://deb.debian.org/debian trixie/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB] Get: 296 http://deb.debian.org/debian trixie/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB] Get: 297 http://deb.debian.org/debian trixie/main arm64 libxshmfence1 arm64 1.3-1+b2 [9076 B] Get: 298 http://deb.debian.org/debian trixie/main arm64 mesa-libgallium arm64 24.2.4-1 [7681 kB] Get: 299 http://deb.debian.org/debian trixie/main arm64 libgbm1 arm64 24.2.4-1 [42.0 kB] Get: 300 http://deb.debian.org/debian trixie/main arm64 libwayland-client0 arm64 1.23.0-1+b1 [26.0 kB] Get: 301 http://deb.debian.org/debian trixie/main arm64 libegl-mesa0 arm64 24.2.4-1 [124 kB] Get: 302 http://deb.debian.org/debian trixie/main arm64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 303 http://deb.debian.org/debian trixie/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB] Get: 304 http://deb.debian.org/debian trixie/main arm64 libevdev2 arm64 1.13.3+dfsg-1 [30.6 kB] Get: 305 http://deb.debian.org/debian trixie/main arm64 libfftw3-double3 arm64 3.3.10-1+b3 [329 kB] Get: 306 http://deb.debian.org/debian trixie/main arm64 libfftw3-long3 arm64 3.3.10-1+b3 [533 kB] Get: 307 http://deb.debian.org/debian trixie/main arm64 libfftw3-single3 arm64 3.3.10-1+b3 [497 kB] Get: 308 http://deb.debian.org/debian trixie/main arm64 libfftw3-bin arm64 3.3.10-1+b3 [43.3 kB] Get: 309 http://deb.debian.org/debian trixie/main arm64 libfftw3-dev arm64 3.3.10-1+b3 [1214 kB] Get: 310 http://deb.debian.org/debian trixie/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB] Get: 311 http://deb.debian.org/debian trixie/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB] Get: 312 http://deb.debian.org/debian trixie/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB] Get: 313 http://deb.debian.org/debian trixie/main arm64 libxfixes3 arm64 1:6.0.0-2+b2 [20.5 kB] Get: 314 http://deb.debian.org/debian trixie/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b3 [19.2 kB] Get: 315 http://deb.debian.org/debian trixie/main arm64 libvulkan1 arm64 1.3.296.0-1 [123 kB] Get: 316 http://deb.debian.org/debian trixie/main arm64 libgl1-mesa-dri arm64 24.2.4-1 [43.5 kB] Get: 317 http://deb.debian.org/debian trixie/main arm64 libglx-mesa0 arm64 24.2.4-1 [152 kB] Get: 318 http://deb.debian.org/debian trixie/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB] Get: 319 http://deb.debian.org/debian trixie/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB] Get: 320 http://deb.debian.org/debian trixie/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 321 http://deb.debian.org/debian trixie/main arm64 x11proto-dev all 2024.1-1 [603 kB] Get: 322 http://deb.debian.org/debian trixie/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB] Get: 323 http://deb.debian.org/debian trixie/main arm64 libxdmcp-dev arm64 1:1.1.2-3+b2 [40.6 kB] Get: 324 http://deb.debian.org/debian trixie/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 325 http://deb.debian.org/debian trixie/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB] Get: 326 http://deb.debian.org/debian trixie/main arm64 libx11-dev arm64 2:1.8.7-1+b1 [861 kB] Get: 327 http://deb.debian.org/debian trixie/main arm64 libglx-dev arm64 1.7.0-1+b2 [15.8 kB] Get: 328 http://deb.debian.org/debian trixie/main arm64 libgl-dev arm64 1.7.0-1+b2 [101 kB] Get: 329 http://deb.debian.org/debian trixie/main arm64 libglew2.2 arm64 2.2.0-4+b2 [162 kB] Get: 330 http://deb.debian.org/debian trixie/main arm64 libopengl0 arm64 1.7.0-1+b2 [32.1 kB] Get: 331 http://deb.debian.org/debian trixie/main arm64 libglu1-mesa arm64 9.0.2-1.1+b2 [162 kB] Get: 332 http://deb.debian.org/debian trixie/main arm64 libopengl-dev arm64 1.7.0-1+b2 [5376 B] Get: 333 http://deb.debian.org/debian trixie/main arm64 libglu1-mesa-dev arm64 9.0.2-1.1+b2 [203 kB] Get: 334 http://deb.debian.org/debian trixie/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB] Get: 335 http://deb.debian.org/debian trixie/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB] Get: 336 http://deb.debian.org/debian trixie/main arm64 libthai-data all 0.1.29-2 [168 kB] Get: 337 http://deb.debian.org/debian trixie/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Get: 338 http://deb.debian.org/debian trixie/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [210 kB] Get: 339 http://deb.debian.org/debian trixie/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [51.8 kB] Get: 340 http://deb.debian.org/debian trixie/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [33.5 kB] Get: 341 http://deb.debian.org/debian trixie/main arm64 libwayland-cursor0 arm64 1.23.0-1+b1 [11.5 kB] Get: 342 http://deb.debian.org/debian trixie/main arm64 libwayland-egl1 arm64 1.23.0-1+b1 [5768 B] Get: 343 http://deb.debian.org/debian trixie/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB] Get: 344 http://deb.debian.org/debian trixie/main arm64 libxcursor1 arm64 1:1.2.2-1+b1 [37.1 kB] Get: 345 http://deb.debian.org/debian trixie/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB] Get: 346 http://deb.debian.org/debian trixie/main arm64 libxinerama1 arm64 2:1.1.4-3+b2 [16.1 kB] Get: 347 http://deb.debian.org/debian trixie/main arm64 xkb-data all 2.42-1 [790 kB] Get: 348 http://deb.debian.org/debian trixie/main arm64 libxkbcommon0 arm64 1.6.0-1+b2 [105 kB] Get: 349 http://deb.debian.org/debian trixie/main arm64 libxrandr2 arm64 2:1.5.4-1+b1 [36.0 kB] Get: 350 http://deb.debian.org/debian trixie/main arm64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 351 http://deb.debian.org/debian trixie/main arm64 libgtk-3-0t64 arm64 3.24.43-4 [2546 kB] Get: 352 http://deb.debian.org/debian trixie/main arm64 libgudev-1.0-0 arm64 238-5+b1 [14.0 kB] Get: 353 http://deb.debian.org/debian trixie/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Get: 354 http://deb.debian.org/debian trixie/main arm64 libimagequant0 arm64 2.18.0-1+b2 [34.6 kB] Get: 355 http://deb.debian.org/debian trixie/main arm64 libwacom-common all 2.13.0-1 [98.0 kB] Get: 356 http://deb.debian.org/debian trixie/main arm64 libwacom9 arm64 2.13.0-1 [22.9 kB] Get: 357 http://deb.debian.org/debian trixie/main arm64 libinput-bin arm64 1.26.2-1 [25.4 kB] Get: 358 http://deb.debian.org/debian trixie/main arm64 libmtdev1t64 arm64 1.1.6-1.2+b1 [22.5 kB] Get: 359 http://deb.debian.org/debian trixie/main arm64 libinput10 arm64 1.26.2-1 [118 kB] Get: 360 http://deb.debian.org/debian trixie/main arm64 libjbig-dev arm64 2.1-6.1+b2 [30.5 kB] Get: 361 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 362 http://deb.debian.org/debian trixie/main arm64 liblapack3 arm64 3.12.0-3+b1 [1812 kB] Get: 363 http://deb.debian.org/debian trixie/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b2 [25.6 kB] Get: 364 http://deb.debian.org/debian trixie/main arm64 liblerc-dev arm64 4.0.0+ds-4+b2 [164 kB] Get: 365 http://deb.debian.org/debian trixie/main arm64 liblz4-dev arm64 1.9.4-3+b1 [79.1 kB] Get: 366 http://deb.debian.org/debian trixie/main arm64 liblzf1 arm64 3.6-4+b2 [10.0 kB] Get: 367 http://deb.debian.org/debian trixie/main arm64 liblzma-dev arm64 5.6.3-1+b1 [312 kB] Get: 368 http://deb.debian.org/debian trixie/main arm64 libmd4c0 arm64 0.5.2-2+b1 [46.1 kB] Get: 369 http://deb.debian.org/debian trixie/main arm64 libnetcdf19t64 arm64 1:4.9.2-7 [444 kB] Get: 370 http://deb.debian.org/debian trixie/main arm64 libnotify4 arm64 0.8.3-1+b2 [24.9 kB] Get: 371 http://deb.debian.org/debian trixie/main arm64 libopenjp2-7 arm64 2.5.0-2+b4 [185 kB] Get: 372 http://deb.debian.org/debian trixie/main arm64 libpcre2-16-0 arm64 10.42-4+b2 [220 kB] Get: 373 http://deb.debian.org/debian trixie/main arm64 libpcre2-32-0 arm64 10.42-4+b2 [211 kB] Get: 374 http://deb.debian.org/debian trixie/main arm64 libpython3-all-dev arm64 3.12.6-1 [1064 B] Get: 375 http://deb.debian.org/debian trixie/main arm64 libqhull-r8.0 arm64 2020.2-6+b2 [229 kB] Get: 376 http://deb.debian.org/debian trixie/main arm64 libqt5core5t64 arm64 5.15.15+dfsg-2 [1733 kB] Get: 377 http://deb.debian.org/debian trixie/main arm64 libqt5dbus5t64 arm64 5.15.15+dfsg-2 [206 kB] Get: 378 http://deb.debian.org/debian trixie/main arm64 libegl1 arm64 1.7.0-1+b2 [34.0 kB] Get: 379 http://deb.debian.org/debian trixie/main arm64 libqt5network5t64 arm64 5.15.15+dfsg-2 [650 kB] Get: 380 http://deb.debian.org/debian trixie/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB] Get: 381 http://deb.debian.org/debian trixie/main arm64 libxcb-icccm4 arm64 0.4.2-1 [27.2 kB] Get: 382 http://deb.debian.org/debian trixie/main arm64 libxcb-util1 arm64 0.4.0-1+b2 [22.6 kB] Get: 383 http://deb.debian.org/debian trixie/main arm64 libxcb-image0 arm64 0.4.0-2+b2 [21.9 kB] Get: 384 http://deb.debian.org/debian trixie/main arm64 libxcb-keysyms1 arm64 0.4.0-1+b3 [15.8 kB] Get: 385 http://deb.debian.org/debian trixie/main arm64 libxcb-render-util0 arm64 0.3.9-1+b2 [17.5 kB] Get: 386 http://deb.debian.org/debian trixie/main arm64 libxcb-shape0 arm64 1.17.0-2+b1 [106 kB] Get: 387 http://deb.debian.org/debian trixie/main arm64 libxcb-xinerama0 arm64 1.17.0-2+b1 [105 kB] Get: 388 http://deb.debian.org/debian trixie/main arm64 libxcb-xinput0 arm64 1.17.0-2+b1 [130 kB] Get: 389 http://deb.debian.org/debian trixie/main arm64 libxcb-xkb1 arm64 1.17.0-2+b1 [129 kB] Get: 390 http://deb.debian.org/debian trixie/main arm64 libxkbcommon-x11-0 arm64 1.6.0-1+b2 [15.4 kB] Get: 391 http://deb.debian.org/debian trixie/main arm64 libqt5gui5t64 arm64 5.15.15+dfsg-2 [3196 kB] Get: 392 http://deb.debian.org/debian trixie/main arm64 libqt5widgets5t64 arm64 5.15.15+dfsg-2 [2287 kB] Get: 393 http://deb.debian.org/debian trixie/main arm64 libqt5xml5t64 arm64 5.15.15+dfsg-2 [121 kB] Get: 394 http://deb.debian.org/debian trixie/main arm64 libqt5designer5 arm64 5.15.15-2 [2718 kB] Get: 395 http://deb.debian.org/debian trixie/main arm64 libqt5sql5t64 arm64 5.15.15+dfsg-2 [120 kB] Get: 396 http://deb.debian.org/debian trixie/main arm64 libqt5help5 arm64 5.15.15-2 [144 kB] Get: 397 http://deb.debian.org/debian trixie/main arm64 libqt5opengl5t64 arm64 5.15.15+dfsg-2 [144 kB] Get: 398 http://deb.debian.org/debian trixie/main arm64 libqt5printsupport5t64 arm64 5.15.15+dfsg-2 [198 kB] Get: 399 http://deb.debian.org/debian trixie/main arm64 libqt5test5t64 arm64 5.15.15+dfsg-2 [139 kB] Get: 400 http://deb.debian.org/debian trixie/main arm64 libraqm0 arm64 0.10.1-1+b2 [13.8 kB] Get: 401 http://deb.debian.org/debian trixie/main arm64 libsharpyuv-dev arm64 1.4.0-0.1+b1 [115 kB] Get: 402 http://deb.debian.org/debian trixie/main arm64 libssm2 arm64 1.4.0-2+b3 [75.3 kB] Get: 403 http://deb.debian.org/debian trixie/main arm64 libssm-dev arm64 1.4.0-2+b3 [15.2 kB] Get: 404 http://deb.debian.org/debian trixie/main arm64 libwebpdemux2 arm64 1.4.0-0.1+b1 [110 kB] Get: 405 http://deb.debian.org/debian trixie/main arm64 libwebpmux3 arm64 1.4.0-0.1+b1 [122 kB] Get: 406 http://deb.debian.org/debian trixie/main arm64 libwebpdecoder3 arm64 1.4.0-0.1+b1 [179 kB] Get: 407 http://deb.debian.org/debian trixie/main arm64 libwebp-dev arm64 1.4.0-0.1+b1 [400 kB] Get: 408 http://deb.debian.org/debian trixie/main arm64 libtiffxx6 arm64 4.5.1+git230720-5 [149 kB] Get: 409 http://deb.debian.org/debian trixie/main arm64 libtiff-dev arm64 4.5.1+git230720-5 [451 kB] Get: 410 http://deb.debian.org/debian trixie/main arm64 libwxbase3.2-1t64 arm64 3.2.6+dfsg-2 [918 kB] Get: 411 http://deb.debian.org/debian trixie/main arm64 libxtst6 arm64 2:1.2.3-1.1+b2 [26.0 kB] Get: 412 http://deb.debian.org/debian trixie/main arm64 libwxgtk3.2-1t64 arm64 3.2.6+dfsg-2 [4150 kB] Get: 413 http://deb.debian.org/debian trixie/main arm64 libwxgtk-gl3.2-1t64 arm64 3.2.6+dfsg-2 [83.6 kB] Get: 414 http://deb.debian.org/debian trixie/main arm64 libxslt1.1 arm64 1.1.35-1.1+b1 [222 kB] Get: 415 http://deb.debian.org/debian trixie/main arm64 pybind11-dev all 2.13.6-1 [204 kB] Get: 416 http://deb.debian.org/debian trixie/main arm64 pymol-data all 3.0.0+dfsg-1 [1433 kB] Get: 417 http://deb.debian.org/debian trixie/main arm64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 418 http://deb.debian.org/debian trixie/main arm64 python3-all arm64 3.12.6-1 [1040 B] Get: 419 http://deb.debian.org/debian trixie/main arm64 python3-all-dev arm64 3.12.6-1 [1068 B] Get: 420 http://deb.debian.org/debian trixie/main arm64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 421 http://deb.debian.org/debian trixie/main arm64 python3-attr all 23.2.0-2 [65.5 kB] Get: 422 http://deb.debian.org/debian trixie/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB] Get: 423 http://deb.debian.org/debian trixie/main arm64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 424 http://deb.debian.org/debian trixie/main arm64 python3.12-tk arm64 3.12.6-1 [110 kB] Get: 425 http://deb.debian.org/debian trixie/main arm64 python3.13-tk arm64 3.13.0-1 [101 kB] Get: 426 http://deb.debian.org/debian trixie/main arm64 python3-tk arm64 3.12.6-1 [9428 B] Get: 427 http://deb.debian.org/debian trixie/main arm64 python3-pil.imagetk arm64 10.4.0-1 [79.4 kB] Get: 428 http://deb.debian.org/debian trixie/main arm64 python3-pil arm64 10.4.0-1 [480 kB] Get: 429 http://deb.debian.org/debian trixie/main arm64 python3-cairo arm64 1.26.1-2 [113 kB] Get: 430 http://deb.debian.org/debian trixie/main arm64 python3-freetype all 2.5.1-1 [89.3 kB] Get: 431 http://deb.debian.org/debian trixie/main arm64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 432 http://deb.debian.org/debian trixie/main arm64 python3-reportlab all 4.2.5-1 [1117 kB] Get: 433 http://deb.debian.org/debian trixie/main arm64 xml-core all 0.19 [20.1 kB] Get: 434 http://deb.debian.org/debian trixie/main arm64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 435 http://deb.debian.org/debian trixie/main arm64 python3-biopython arm64 1.84+dfsg-4 [1636 kB] Get: 436 http://deb.debian.org/debian trixie/main arm64 python3-brotli arm64 1.1.0-2+b5 [307 kB] Get: 437 http://deb.debian.org/debian trixie/main arm64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 438 http://deb.debian.org/debian trixie/main arm64 python3-charset-normalizer arm64 3.4.0-1 [112 kB] Get: 439 http://deb.debian.org/debian trixie/main arm64 python3-contourpy arm64 1.3.0-2 [191 kB] Get: 440 http://deb.debian.org/debian trixie/main arm64 python3-cycler all 0.12.1-1 [9496 B] Get: 441 http://deb.debian.org/debian trixie/main arm64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 442 http://deb.debian.org/debian trixie/main arm64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 443 http://deb.debian.org/debian trixie/main arm64 python3-flexcache all 0.3-2 [13.5 kB] Get: 444 http://deb.debian.org/debian trixie/main arm64 python3-flexparser all 0.3.1-2 [42.6 kB] Get: 445 http://deb.debian.org/debian trixie/main arm64 python3-tz all 2024.1-2 [30.9 kB] Get: 446 http://deb.debian.org/debian trixie/main arm64 python3-six all 1.16.0-7 [16.4 kB] Get: 447 http://deb.debian.org/debian trixie/main arm64 python3-fs all 2.4.16-4 [95.4 kB] Get: 448 http://deb.debian.org/debian trixie/main arm64 python3-lxml arm64 5.3.0-1 [1096 kB] Get: 449 http://deb.debian.org/debian trixie/main arm64 python3-lz4 arm64 4.0.2+dfsg-1+b5 [25.3 kB] Get: 450 http://deb.debian.org/debian trixie/main arm64 python3-scipy arm64 1.13.1-5 [15.4 MB] Get: 451 http://deb.debian.org/debian trixie/main arm64 python3-mpmath all 1.3.0-1 [419 kB] Get: 452 http://deb.debian.org/debian trixie/main arm64 python3-sympy all 1.13.3-1 [4147 kB] Get: 453 http://deb.debian.org/debian trixie/main arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 454 http://deb.debian.org/debian trixie/main arm64 unicode-data all 15.1.0-1 [8547 kB] Get: 455 http://deb.debian.org/debian trixie/main arm64 python3-fonttools arm64 4.54.1-4 [1356 kB] Get: 456 http://deb.debian.org/debian trixie/main arm64 python3-h5py-serial arm64 3.11.0-5 [887 kB] Get: 457 http://deb.debian.org/debian trixie/main arm64 python3-h5py all 3.11.0-5 [14.7 kB] Get: 458 http://deb.debian.org/debian trixie/main arm64 python3-hdf5plugin all 4.0.1-3 [22.9 kB] Get: 459 http://deb.debian.org/debian trixie/main arm64 python3-idna all 3.8-2 [41.6 kB] Get: 460 http://deb.debian.org/debian trixie/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 461 http://deb.debian.org/debian trixie/main arm64 python3-kiwisolver arm64 1.4.7-2 [56.7 kB] Get: 462 http://deb.debian.org/debian trixie/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 463 http://deb.debian.org/debian trixie/main arm64 python3-packaging all 24.1-1 [45.8 kB] Get: 464 http://deb.debian.org/debian trixie/main arm64 python3-matplotlib arm64 3.8.3-3 [5509 kB] Get: 465 http://deb.debian.org/debian trixie/main arm64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 466 http://deb.debian.org/debian trixie/main arm64 python3-mrcfile all 1.5.3-3 [119 kB] Get: 467 http://deb.debian.org/debian trixie/main arm64 python3-msgpack arm64 1.0.3-3+b3 [77.4 kB] Get: 468 http://deb.debian.org/debian trixie/main arm64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 469 http://deb.debian.org/debian trixie/main arm64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 470 http://deb.debian.org/debian trixie/main arm64 python3-pint all 0.24.3-2 [224 kB] Get: 471 http://deb.debian.org/debian trixie/main arm64 python3-nxmx all 0.0.3-3 [15.4 kB] Get: 472 http://deb.debian.org/debian trixie/main arm64 python3-opengl all 3.1.7+dfsg-1 [604 kB] Get: 473 http://deb.debian.org/debian trixie/main arm64 python3-ordered-set all 4.1.0-1 [9628 B] Get: 474 http://deb.debian.org/debian trixie/main arm64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 475 http://deb.debian.org/debian trixie/main arm64 python3-pip all 24.3.1+dfsg-1 [1441 kB] Get: 476 http://deb.debian.org/debian trixie/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 477 http://deb.debian.org/debian trixie/main arm64 python3-procrunner all 2.3.3-2 [13.9 kB] Get: 478 http://deb.debian.org/debian trixie/main arm64 python3-psutil arm64 5.9.8-2+b1 [226 kB] Get: 479 http://deb.debian.org/debian trixie/main arm64 python3-pycbf arm64 0.9.7+dfsg1-4 [159 kB] Get: 480 http://deb.debian.org/debian trixie/main arm64 python3-pyqt5.sip arm64 12.15.0-1+b1 [56.1 kB] Get: 481 http://deb.debian.org/debian trixie/main arm64 python3-pyqt5 arm64 5.15.11+dfsg-1+b2 [2322 kB] Get: 482 http://deb.debian.org/debian trixie/main arm64 python3-pyqt5.qtopengl arm64 5.15.11+dfsg-1+b2 [199 kB] Get: 483 http://deb.debian.org/debian trixie/main arm64 python3-pymol arm64 3.0.0+dfsg-1+b1 [3567 kB] Get: 484 http://deb.debian.org/debian trixie/main arm64 python3-pytest all 8.3.3-1 [249 kB] Get: 485 http://deb.debian.org/debian trixie/main arm64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 486 http://deb.debian.org/debian trixie/main arm64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 487 http://deb.debian.org/debian trixie/main arm64 python3-tqdm all 4.66.5-1 [90.1 kB] Get: 488 http://deb.debian.org/debian trixie/main arm64 python3-wxgtk4.0 arm64 4.2.2+dfsg-1 [6799 kB] Get: 489 http://deb.debian.org/debian trixie/main arm64 scons all 4.8.1+dfsg-1 [548 kB] Fetched 308 MB in 4s (71.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20089 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b2_arm64.deb ... Unpacking libapparmor1:arm64 (3.1.7-1+b2) ... Selecting previously unselected package libsystemd-shared:arm64. Preparing to unpack .../libsystemd-shared_256.7-3_arm64.deb ... Unpacking libsystemd-shared:arm64 (256.7-3) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_256.7-3_arm64.deb ... Unpacking systemd (256.7-3) ... Setting up libapparmor1:arm64 (3.1.7-1+b2) ... Setting up libsystemd-shared:arm64 (256.7-3) ... Setting up systemd (256.7-3) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21040 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_256.7-3_arm64.deb ... Unpacking systemd-sysv (256.7-3) ... Selecting previously unselected package libdbus-1-3:arm64. Preparing to unpack .../01-libdbus-1-3_1.14.10-6_arm64.deb ... Unpacking libdbus-1-3:arm64 (1.14.10-6) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../02-dbus-bin_1.14.10-6_arm64.deb ... Unpacking dbus-bin (1.14.10-6) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../03-dbus-session-bus-common_1.14.10-6_all.deb ... Unpacking dbus-session-bus-common (1.14.10-6) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../04-libexpat1_2.6.3-2_arm64.deb ... Unpacking libexpat1:arm64 (2.6.3-2) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../05-dbus-daemon_1.14.10-6_arm64.deb ... Unpacking dbus-daemon (1.14.10-6) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../06-dbus-system-bus-common_1.14.10-6_all.deb ... Unpacking dbus-system-bus-common (1.14.10-6) ... Selecting previously unselected package dbus. Preparing to unpack .../07-dbus_1.14.10-6_arm64.deb ... Unpacking dbus (1.14.10-6) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../08-fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:arm64. Preparing to unpack .../09-libpython3.12-minimal_3.12.6-1_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.6-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../10-python3.12-minimal_3.12.6-1_arm64.deb ... Unpacking python3.12-minimal (3.12.6-1) ... Setting up libpython3.12-minimal:arm64 (3.12.6-1) ... Setting up libexpat1:arm64 (2.6.3-2) ... Setting up python3.12-minimal (3.12.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21478 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_arm64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:arm64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:arm64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_arm64.deb ... Unpacking libnsl2:arm64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../14-libreadline8t64_8.2-5_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:arm64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.6-1_arm64.deb ... Unpacking libpython3.12-stdlib:arm64 (3.12.6-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.6-1_arm64.deb ... Unpacking python3.12 (3.12.6-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22552 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_arm64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package libpopt0:arm64. Preparing to unpack .../001-libpopt0_1.19+dfsg-2_arm64.deb ... Unpacking libpopt0:arm64 (1.19+dfsg-2) ... Selecting previously unselected package rsync. Preparing to unpack .../002-rsync_3.3.0-1+b1_arm64.deb ... Unpacking rsync (3.3.0-1+b1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../004-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a4.0.4-6_arm64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../007-openssl_3.3.2-2_arm64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../008-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../010-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../013-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../014-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package libpam-systemd:arm64. Preparing to unpack .../015-libpam-systemd_256.7-3_arm64.deb ... Unpacking libpam-systemd:arm64 (256.7-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../016-bsdextrautils_2.40.2-9_arm64.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../017-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../018-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libgdk-pixbuf2.0-common. Preparing to unpack .../019-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Selecting previously unselected package libglib2.0-0t64:arm64. Preparing to unpack .../020-libglib2.0-0t64_2.82.2-2_arm64.deb ... Unpacking libglib2.0-0t64:arm64 (2.82.2-2) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../021-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../022-libxml2_2.12.7+dfsg+really2.9.14-0.1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../023-shared-mime-info_2.4-5+b1_arm64.deb ... Unpacking shared-mime-info (2.4-5+b1) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../024-libjpeg62-turbo_1%3a2.1.5-3+b1_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:2.1.5-3+b1) ... Selecting previously unselected package libpng16-16t64:arm64. Preparing to unpack .../025-libpng16-16t64_1.6.44-2_arm64.deb ... Unpacking libpng16-16t64:arm64 (1.6.44-2) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../026-libdeflate0_1.22-1_arm64.deb ... Unpacking libdeflate0:arm64 (1.22-1) ... Selecting previously unselected package libjbig0:arm64. Preparing to unpack .../027-libjbig0_2.1-6.1+b2_arm64.deb ... Unpacking libjbig0:arm64 (2.1-6.1+b2) ... Selecting previously unselected package liblerc4:arm64. Preparing to unpack .../028-liblerc4_4.0.0+ds-4+b2_arm64.deb ... Unpacking liblerc4:arm64 (4.0.0+ds-4+b2) ... Selecting previously unselected package libsharpyuv0:arm64. Preparing to unpack .../029-libsharpyuv0_1.4.0-0.1+b1_arm64.deb ... Unpacking libsharpyuv0:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libwebp7:arm64. Preparing to unpack .../030-libwebp7_1.4.0-0.1+b1_arm64.deb ... Unpacking libwebp7:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libtiff6:arm64. Preparing to unpack .../031-libtiff6_4.5.1+git230720-5_arm64.deb ... Unpacking libtiff6:arm64 (4.5.1+git230720-5) ... Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. Preparing to unpack .../032-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1+b1_arm64.deb ... Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1+b1) ... Selecting previously unselected package gtk-update-icon-cache. Preparing to unpack .../033-gtk-update-icon-cache_4.16.3+ds-2_arm64.deb ... No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. Unpacking gtk-update-icon-cache (4.16.3+ds-2) ... Selecting previously unselected package hicolor-icon-theme. Preparing to unpack .../034-hicolor-icon-theme_0.18-1_all.deb ... Unpacking hicolor-icon-theme (0.18-1) ... Selecting previously unselected package adwaita-icon-theme. Preparing to unpack .../035-adwaita-icon-theme_47.0-2_all.deb ... Unpacking adwaita-icon-theme (47.0-2) ... Selecting previously unselected package architecture-properties:arm64. Preparing to unpack .../036-architecture-properties_0.2.3_arm64.deb ... Unpacking architecture-properties:arm64 (0.2.3) ... Selecting previously unselected package at-spi2-common. Preparing to unpack .../037-at-spi2-common_2.54.0-1_all.deb ... Unpacking at-spi2-common (2.54.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../038-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../039-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../040-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../041-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../042-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libtcl8.6:arm64. Preparing to unpack .../043-libtcl8.6_8.6.15+dfsg-2_arm64.deb ... Unpacking libtcl8.6:arm64 (8.6.15+dfsg-2) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../044-libbrotli1_1.1.0-2+b5_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b5) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../045-libfreetype6_2.13.3+dfsg-1_arm64.deb ... Unpacking libfreetype6:arm64 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../046-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../047-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:arm64. Preparing to unpack .../048-libfontenc1_1%3a1.1.8-1+b1_arm64.deb ... Unpacking libfontenc1:arm64 (1:1.1.8-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../049-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../050-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../051-xfonts-utils_1%3a7.7+7_arm64.deb ... Unpacking xfonts-utils (1:7.7+7) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../052-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../053-fontconfig-config_2.15.0-1.1+b1_arm64.deb ... Unpacking fontconfig-config (2.15.0-1.1+b1) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../054-libfontconfig1_2.15.0-1.1+b1_arm64.deb ... Unpacking libfontconfig1:arm64 (2.15.0-1.1+b1) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../055-libxau6_1%3a1.0.11-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../056-libxdmcp6_1%3a1.1.2-3+b2_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3+b2) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../057-libxcb1_1.17.0-2+b1_arm64.deb ... Unpacking libxcb1:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../058-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../059-libx11-6_2%3a1.8.7-1+b1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../060-libxrender1_1%3a0.9.10-1.1+b2_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.10-1.1+b2) ... Selecting previously unselected package libxft2:arm64. Preparing to unpack .../061-libxft2_2.3.6-1+b2_arm64.deb ... Unpacking libxft2:arm64 (2.3.6-1+b2) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../062-libxext6_2%3a1.3.4-1+b2_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.4-1+b2) ... Selecting previously unselected package libxss1:arm64. Preparing to unpack .../063-libxss1_1%3a1.2.3-1+b2_arm64.deb ... Unpacking libxss1:arm64 (1:1.2.3-1+b2) ... Selecting previously unselected package libtk8.6:arm64. Preparing to unpack .../064-libtk8.6_8.6.15-1_arm64.deb ... Unpacking libtk8.6:arm64 (8.6.15-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../065-tk8.6-blt2.5_2.5.3+dfsg-7+b1_arm64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7+b1) ... Selecting previously unselected package blt. Preparing to unpack .../066-blt_2.5.3+dfsg-7+b1_arm64.deb ... Unpacking blt (2.5.3+dfsg-7+b1) ... Selecting previously unselected package dbus-user-session. Preparing to unpack .../067-dbus-user-session_1.14.10-6_arm64.deb ... Unpacking dbus-user-session (1.14.10-6) ... Selecting previously unselected package libdconf1:arm64. Preparing to unpack .../068-libdconf1_0.40.0-4+b3_arm64.deb ... Unpacking libdconf1:arm64 (0.40.0-4+b3) ... Selecting previously unselected package dconf-service. Preparing to unpack .../069-dconf-service_0.40.0-4+b3_arm64.deb ... Unpacking dconf-service (0.40.0-4+b3) ... Selecting previously unselected package dconf-gsettings-backend:arm64. Preparing to unpack .../070-dconf-gsettings-backend_0.40.0-4+b3_arm64.deb ... Unpacking dconf-gsettings-backend:arm64 (0.40.0-4+b3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../071-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../072-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../073-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../074-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../075-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../076-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../077-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../078-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../079-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../080-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../081-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../082-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package dh-exec. Preparing to unpack .../083-dh-exec_0.30+b1_arm64.deb ... Unpacking dh-exec (0.30+b1) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../084-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../085-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../086-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../087-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../088-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../089-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../090-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../091-python3-pkg-resources_74.1.2-2_all.deb ... Unpacking python3-pkg-resources (74.1.2-2) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../092-python3-zipp_3.20.2-1_all.deb ... Unpacking python3-zipp (3.20.2-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../093-python3-setuptools_74.1.2-2_all.deb ... Unpacking python3-setuptools (74.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../094-dh-python_6.20241024_all.deb ... Unpacking dh-python (6.20241024) ... Selecting previously unselected package libevent-core-2.1-7t64:arm64. Preparing to unpack .../095-libevent-core-2.1-7t64_2.1.12-stable-10+b1_arm64.deb ... Unpacking libevent-core-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. Preparing to unpack .../096-libevent-pthreads-2.1-7t64_2.1.12-stable-10+b1_arm64.deb ... Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libnl-3-200:arm64. Preparing to unpack .../097-libnl-3-200_3.7.0-0.3+b1_arm64.deb ... Unpacking libnl-3-200:arm64 (3.7.0-0.3+b1) ... Selecting previously unselected package libnl-route-3-200:arm64. Preparing to unpack .../098-libnl-route-3-200_3.7.0-0.3+b1_arm64.deb ... Unpacking libnl-route-3-200:arm64 (3.7.0-0.3+b1) ... Selecting previously unselected package libibverbs1:arm64. Preparing to unpack .../099-libibverbs1_52.0-2+b1_arm64.deb ... Unpacking libibverbs1:arm64 (52.0-2+b1) ... Selecting previously unselected package ibverbs-providers:arm64. Preparing to unpack .../100-ibverbs-providers_52.0-2+b1_arm64.deb ... Unpacking ibverbs-providers:arm64 (52.0-2+b1) ... Selecting previously unselected package librdmacm1t64:arm64. Preparing to unpack .../101-librdmacm1t64_52.0-2+b1_arm64.deb ... Unpacking librdmacm1t64:arm64 (52.0-2+b1) ... Selecting previously unselected package libfabric1:arm64. Preparing to unpack .../102-libfabric1_1.17.0-3.1_arm64.deb ... Unpacking libfabric1:arm64 (1.17.0-3.1) ... Selecting previously unselected package libhwloc15:arm64. Preparing to unpack .../103-libhwloc15_2.11.2-1_arm64.deb ... Unpacking libhwloc15:arm64 (2.11.2-1) ... Selecting previously unselected package libmunge2:arm64. Preparing to unpack .../104-libmunge2_0.5.15-4+b1_arm64.deb ... Unpacking libmunge2:arm64 (0.5.15-4+b1) ... Selecting previously unselected package libpciaccess0:arm64. Preparing to unpack .../105-libpciaccess0_0.17-3+b2_arm64.deb ... Unpacking libpciaccess0:arm64 (0.17-3+b2) ... Selecting previously unselected package libxnvctrl0:arm64. Preparing to unpack .../106-libxnvctrl0_535.171.04-1+b1_arm64.deb ... Unpacking libxnvctrl0:arm64 (535.171.04-1+b1) ... Selecting previously unselected package ocl-icd-libopencl1:arm64. Preparing to unpack .../107-ocl-icd-libopencl1_2.3.2-1+b2_arm64.deb ... Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1+b2) ... Selecting previously unselected package libhwloc-plugins:arm64. Preparing to unpack .../108-libhwloc-plugins_2.11.2-1_arm64.deb ... Unpacking libhwloc-plugins:arm64 (2.11.2-1) ... Selecting previously unselected package libpmix2t64:arm64. Preparing to unpack .../109-libpmix2t64_5.0.3-2+b1_arm64.deb ... Unpacking libpmix2t64:arm64 (5.0.3-2+b1) ... Selecting previously unselected package libedit2:arm64. Preparing to unpack .../110-libedit2_3.1-20240808-1_arm64.deb ... Unpacking libedit2:arm64 (3.1-20240808-1) ... Selecting previously unselected package libz3-4:arm64. Preparing to unpack .../111-libz3-4_4.8.12-3.1+b3_arm64.deb ... Unpacking libz3-4:arm64 (4.8.12-3.1+b3) ... Selecting previously unselected package libllvm17t64:arm64. Preparing to unpack .../112-libllvm17t64_1%3a17.0.6-18_arm64.deb ... Unpacking libllvm17t64:arm64 (1:17.0.6-18) ... Selecting previously unselected package libamd-comgr2:arm64. Preparing to unpack .../113-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3+b2_arm64.deb ... Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../114-libdrm-common_2.4.123-1_all.deb ... Unpacking libdrm-common (2.4.123-1) ... Selecting previously unselected package libdrm2:arm64. Preparing to unpack .../115-libdrm2_2.4.123-1_arm64.deb ... Unpacking libdrm2:arm64 (2.4.123-1) ... Selecting previously unselected package libdrm-amdgpu1:arm64. Preparing to unpack .../116-libdrm-amdgpu1_2.4.123-1_arm64.deb ... Unpacking libdrm-amdgpu1:arm64 (2.4.123-1) ... Selecting previously unselected package libnuma1:arm64. Preparing to unpack .../117-libnuma1_2.0.18-1+b1_arm64.deb ... Unpacking libnuma1:arm64 (2.0.18-1+b1) ... Selecting previously unselected package libhsakmt1:arm64. Preparing to unpack .../118-libhsakmt1_5.7.0-1_arm64.deb ... Unpacking libhsakmt1:arm64 (5.7.0-1) ... Selecting previously unselected package libhsa-runtime64-1:arm64. Preparing to unpack .../119-libhsa-runtime64-1_5.7.1-3_arm64.deb ... Unpacking libhsa-runtime64-1:arm64 (5.7.1-3) ... Selecting previously unselected package libamdhip64-5. Preparing to unpack .../120-libamdhip64-5_5.7.1-5_arm64.deb ... Unpacking libamdhip64-5 (5.7.1-5) ... Selecting previously unselected package libibumad3:arm64. Preparing to unpack .../121-libibumad3_52.0-2+b1_arm64.deb ... Unpacking libibumad3:arm64 (52.0-2+b1) ... Selecting previously unselected package libibmad5:arm64. Preparing to unpack .../122-libibmad5_52.0-2+b1_arm64.deb ... Unpacking libibmad5:arm64 (52.0-2+b1) ... Selecting previously unselected package libucx0:arm64. Preparing to unpack .../123-libucx0_1.17.0+ds-3_arm64.deb ... Unpacking libucx0:arm64 (1.17.0+ds-3) ... Selecting previously unselected package libopenmpi3t64:arm64. Preparing to unpack .../124-libopenmpi3t64_4.1.6-13.3_arm64.deb ... Unpacking libopenmpi3t64:arm64 (4.1.6-13.3) ... Selecting previously unselected package fftw2. Preparing to unpack .../125-fftw2_2.1.5-7_arm64.deb ... Unpacking fftw2 (2.1.5-7) ... Selecting previously unselected package fftw-dev. Preparing to unpack .../126-fftw-dev_2.1.5-7_arm64.deb ... Unpacking fftw-dev (2.1.5-7) ... Selecting previously unselected package fontconfig. Preparing to unpack .../127-fontconfig_2.15.0-1.1+b1_arm64.deb ... Unpacking fontconfig (2.15.0-1.1+b1) ... Selecting previously unselected package fonts-font-awesome. Preparing to unpack .../128-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../129-fonts-lyx_2.4.2.1-1_all.deb ... Unpacking fonts-lyx (2.4.2.1-1) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../130-hdf5-helpers_1.10.10+repack-4_arm64.deb ... Unpacking hdf5-helpers (1.10.10+repack-4) ... Selecting previously unselected package libonig5:arm64. Preparing to unpack .../131-libonig5_6.9.9-1+b1_arm64.deb ... Unpacking libonig5:arm64 (6.9.9-1+b1) ... Selecting previously unselected package libjq1:arm64. Preparing to unpack .../132-libjq1_1.7.1-3+b1_arm64.deb ... Unpacking libjq1:arm64 (1.7.1-3+b1) ... Selecting previously unselected package jq. Preparing to unpack .../133-jq_1.7.1-3+b1_arm64.deb ... Unpacking jq (1.7.1-3+b1) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../134-libaec0_1.1.3-1+b1_arm64.deb ... Unpacking libaec0:arm64 (1.1.3-1+b1) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../135-libsz2_1.1.3-1+b1_arm64.deb ... Unpacking libsz2:arm64 (1.1.3-1+b1) ... Selecting previously unselected package libaec-dev:arm64. Preparing to unpack .../136-libaec-dev_1.1.3-1+b1_arm64.deb ... Unpacking libaec-dev:arm64 (1.1.3-1+b1) ... Selecting previously unselected package libann-cctbx0. Preparing to unpack .../137-libann-cctbx0_1.1.2+doc-9+b2_arm64.deb ... Unpacking libann-cctbx0 (1.1.2+doc-9+b2) ... Selecting previously unselected package libann-cctbx-dev. Preparing to unpack .../138-libann-cctbx-dev_1.1.2+doc-9+b2_arm64.deb ... Unpacking libann-cctbx-dev (1.1.2+doc-9+b2) ... Selecting previously unselected package libantlr3c-3.4-0:arm64. Preparing to unpack .../139-libantlr3c-3.4-0_3.4+dfsg-4+b2_arm64.deb ... Unpacking libantlr3c-3.4-0:arm64 (3.4+dfsg-4+b2) ... Selecting previously unselected package libantlr3c-dev. Preparing to unpack .../140-libantlr3c-dev_3.4+dfsg-4+b2_arm64.deb ... Unpacking libantlr3c-dev (3.4+dfsg-4+b2) ... Selecting previously unselected package libatk1.0-0t64:arm64. Preparing to unpack .../141-libatk1.0-0t64_2.54.0-1_arm64.deb ... Unpacking libatk1.0-0t64:arm64 (2.54.0-1) ... Selecting previously unselected package libxi6:arm64. Preparing to unpack .../142-libxi6_2%3a1.8.2-1_arm64.deb ... Unpacking libxi6:arm64 (2:1.8.2-1) ... Selecting previously unselected package libatspi2.0-0t64:arm64. Preparing to unpack .../143-libatspi2.0-0t64_2.54.0-1_arm64.deb ... Unpacking libatspi2.0-0t64:arm64 (2.54.0-1) ... Selecting previously unselected package libatk-bridge2.0-0t64:arm64. Preparing to unpack .../144-libatk-bridge2.0-0t64_2.54.0-1_arm64.deb ... Unpacking libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... Selecting previously unselected package libavahi-common-data:arm64. Preparing to unpack .../145-libavahi-common-data_0.8-13+b3_arm64.deb ... Unpacking libavahi-common-data:arm64 (0.8-13+b3) ... Selecting previously unselected package libavahi-common3:arm64. Preparing to unpack .../146-libavahi-common3_0.8-13+b3_arm64.deb ... Unpacking libavahi-common3:arm64 (0.8-13+b3) ... Selecting previously unselected package libavahi-client3:arm64. Preparing to unpack .../147-libavahi-client3_0.8-13+b3_arm64.deb ... Unpacking libavahi-client3:arm64 (0.8-13+b3) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../148-libblas3_3.12.0-3+b1_arm64.deb ... Unpacking libblas3:arm64 (3.12.0-3+b1) ... Selecting previously unselected package libboost1.83-dev:arm64. Preparing to unpack .../149-libboost1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-atomic1.83.0:arm64. Preparing to unpack .../150-libboost-atomic1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-atomic1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-atomic1.83-dev:arm64. Preparing to unpack .../151-libboost-atomic1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-atomic1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-chrono1.83.0t64:arm64. Preparing to unpack .../152-libboost-chrono1.83.0t64_1.83.0-3.2_arm64.deb ... Unpacking libboost-chrono1.83.0t64:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-chrono1.83-dev:arm64. Preparing to unpack .../153-libboost-chrono1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-chrono1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-date-time1.83.0:arm64. Preparing to unpack .../154-libboost-date-time1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-date-time1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-serialization1.83.0:arm64. Preparing to unpack .../155-libboost-serialization1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-serialization1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-serialization1.83-dev:arm64. Preparing to unpack .../156-libboost-serialization1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-serialization1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-date-time1.83-dev:arm64. Preparing to unpack .../157-libboost-date-time1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-date-time1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-dev:arm64. Preparing to unpack .../158-libboost-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-dev:arm64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-python1.83.0. Preparing to unpack .../159-libboost-python1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-python1.83.0 (1.83.0-3.2) ... Selecting previously unselected package libboost-numpy1.83.0. Preparing to unpack .../160-libboost-numpy1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-numpy1.83.0 (1.83.0-3.2) ... Selecting previously unselected package libboost-numpy1.83-dev. Preparing to unpack .../161-libboost-numpy1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-numpy1.83-dev (1.83.0-3.2) ... Selecting previously unselected package libboost-numpy-dev. Preparing to unpack .../162-libboost-numpy-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-numpy-dev (1.83.0.2+b2) ... Selecting previously unselected package libpython3.12t64:arm64. Preparing to unpack .../163-libpython3.12t64_3.12.6-1_arm64.deb ... Unpacking libpython3.12t64:arm64 (3.12.6-1) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../164-libexpat1-dev_2.6.3-2_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.6.3-2) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../165-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libpython3.12-dev:arm64. Preparing to unpack .../166-libpython3.12-dev_3.12.6-1_arm64.deb ... Unpacking libpython3.12-dev:arm64 (3.12.6-1) ... Selecting previously unselected package libpython3-dev:arm64. Preparing to unpack .../167-libpython3-dev_3.12.6-1_arm64.deb ... Unpacking libpython3-dev:arm64 (3.12.6-1) ... Selecting previously unselected package python3.12-dev. Preparing to unpack .../168-python3.12-dev_3.12.6-1_arm64.deb ... Unpacking python3.12-dev (3.12.6-1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../169-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../170-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../171-libjs-sphinxdoc_7.4.7-4_all.deb ... Unpacking libjs-sphinxdoc (7.4.7-4) ... Selecting previously unselected package python3-dev. Preparing to unpack .../172-python3-dev_3.12.6-1_arm64.deb ... Unpacking python3-dev (3.12.6-1) ... Selecting previously unselected package libboost-python1.83-dev. Preparing to unpack .../173-libboost-python1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-python1.83-dev (1.83.0-3.2) ... Selecting previously unselected package libboost-python-dev. Preparing to unpack .../174-libboost-python-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-python-dev (1.83.0.2+b2) ... Selecting previously unselected package libboost-system1.83.0:arm64. Preparing to unpack .../175-libboost-system1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-system1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-system1.83-dev:arm64. Preparing to unpack .../176-libboost-system1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-system1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-thread1.83.0:arm64. Preparing to unpack .../177-libboost-thread1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-thread1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-thread1.83-dev:arm64. Preparing to unpack .../178-libboost-thread1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-thread1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-thread-dev:arm64. Preparing to unpack .../179-libboost-thread-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-thread-dev:arm64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-timer1.83.0:arm64. Preparing to unpack .../180-libboost-timer1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-timer1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-timer1.83-dev:arm64. Preparing to unpack .../181-libboost-timer1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-timer1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-timer-dev:arm64. Preparing to unpack .../182-libboost-timer-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-timer-dev:arm64 (1.83.0.2+b2) ... Selecting previously unselected package libbrotli-dev:arm64. Preparing to unpack .../183-libbrotli-dev_1.1.0-2+b5_arm64.deb ... Unpacking libbrotli-dev:arm64 (1.1.0-2+b5) ... Selecting previously unselected package libpixman-1-0:arm64. Preparing to unpack .../184-libpixman-1-0_0.42.2-1+b1_arm64.deb ... Unpacking libpixman-1-0:arm64 (0.42.2-1+b1) ... Selecting previously unselected package libxcb-render0:arm64. Preparing to unpack .../185-libxcb-render0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-render0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:arm64. Preparing to unpack .../186-libxcb-shm0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-shm0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libcairo2:arm64. Preparing to unpack .../187-libcairo2_1.18.2-2_arm64.deb ... Unpacking libcairo2:arm64 (1.18.2-2) ... Selecting previously unselected package libcairo-gobject2:arm64. Preparing to unpack .../188-libcairo-gobject2_1.18.2-2_arm64.deb ... Unpacking libcairo-gobject2:arm64 (1.18.2-2) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../189-libsasl2-modules-db_2.1.28+dfsg1-8_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../190-libsasl2-2_2.1.28+dfsg1-8_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../191-libldap-2.5-0_2.5.18+dfsg-3+b1_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../192-libnghttp2-14_1.64.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.64.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../193-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../194-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../195-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:arm64. Preparing to unpack .../196-libcurl4t64_8.10.1-2_arm64.deb ... Unpacking libcurl4t64:arm64 (8.10.1-2) ... Selecting previously unselected package libhdf5-103-1t64:arm64. Preparing to unpack .../197-libhdf5-103-1t64_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-4) ... Selecting previously unselected package libcbf1t64:arm64. Preparing to unpack .../198-libcbf1t64_0.9.7+dfsg1-4_arm64.deb ... Unpacking libcbf1t64:arm64 (0.9.7+dfsg1-4) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../199-libgfortran5_14.2.0-6_arm64.deb ... Unpacking libgfortran5:arm64 (14.2.0-6) ... Selecting previously unselected package libhdf5-fortran-102t64:arm64. Preparing to unpack .../200-libhdf5-fortran-102t64_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-fortran-102t64:arm64 (1.10.10+repack-4) ... Selecting previously unselected package libhdf5-hl-100t64:arm64. Preparing to unpack .../201-libhdf5-hl-100t64_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-100t64:arm64. Preparing to unpack .../202-libhdf5-hl-fortran-100t64_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-4) ... Selecting previously unselected package libhdf5-cpp-103-1t64:arm64. Preparing to unpack .../203-libhdf5-cpp-103-1t64_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-4) ... Selecting previously unselected package libhdf5-hl-cpp-100t64:arm64. Preparing to unpack .../204-libhdf5-hl-cpp-100t64_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-4) ... Selecting previously unselected package libjpeg62-turbo-dev:arm64. Preparing to unpack .../205-libjpeg62-turbo-dev_1%3a2.1.5-3+b1_arm64.deb ... Unpacking libjpeg62-turbo-dev:arm64 (1:2.1.5-3+b1) ... Selecting previously unselected package libjpeg-dev:arm64. Preparing to unpack .../206-libjpeg-dev_1%3a2.1.5-3+b1_arm64.deb ... Unpacking libjpeg-dev:arm64 (1:2.1.5-3+b1) ... Selecting previously unselected package libidn2-dev:arm64. Preparing to unpack .../207-libidn2-dev_2.3.7-2+b1_arm64.deb ... Unpacking libidn2-dev:arm64 (2.3.7-2+b1) ... Selecting previously unselected package libpkgconf3:arm64. Preparing to unpack .../208-libpkgconf3_1.8.1-4_arm64.deb ... Unpacking libpkgconf3:arm64 (1.8.1-4) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../209-pkgconf-bin_1.8.1-4_arm64.deb ... Unpacking pkgconf-bin (1.8.1-4) ... Selecting previously unselected package pkgconf:arm64. Preparing to unpack .../210-pkgconf_1.8.1-4_arm64.deb ... Unpacking pkgconf:arm64 (1.8.1-4) ... Selecting previously unselected package libnghttp2-dev:arm64. Preparing to unpack .../211-libnghttp2-dev_1.64.0-1_arm64.deb ... Unpacking libnghttp2-dev:arm64 (1.64.0-1) ... Selecting previously unselected package libpsl-dev:arm64. Preparing to unpack .../212-libpsl-dev_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl-dev:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package libgmpxx4ldbl:arm64. Preparing to unpack .../213-libgmpxx4ldbl_2%3a6.3.0+dfsg-2+b2_arm64.deb ... Unpacking libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-2+b2) ... Selecting previously unselected package libgmp-dev:arm64. Preparing to unpack .../214-libgmp-dev_2%3a6.3.0+dfsg-2+b2_arm64.deb ... Unpacking libgmp-dev:arm64 (2:6.3.0+dfsg-2+b2) ... Selecting previously unselected package libevent-2.1-7t64:arm64. Preparing to unpack .../215-libevent-2.1-7t64_2.1.12-stable-10+b1_arm64.deb ... Unpacking libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libunbound8:arm64. Preparing to unpack .../216-libunbound8_1.22.0-1_arm64.deb ... Unpacking libunbound8:arm64 (1.22.0-1) ... Selecting previously unselected package libgnutls-dane0t64:arm64. Preparing to unpack .../217-libgnutls-dane0t64_3.8.6-2+b1_arm64.deb ... Unpacking libgnutls-dane0t64:arm64 (3.8.6-2+b1) ... Selecting previously unselected package libgnutls-openssl27t64:arm64. Preparing to unpack .../218-libgnutls-openssl27t64_3.8.6-2+b1_arm64.deb ... Unpacking libgnutls-openssl27t64:arm64 (3.8.6-2+b1) ... Selecting previously unselected package libp11-kit-dev:arm64. Preparing to unpack .../219-libp11-kit-dev_0.25.5-2+b1_arm64.deb ... Unpacking libp11-kit-dev:arm64 (0.25.5-2+b1) ... Selecting previously unselected package libtasn1-6-dev:arm64. Preparing to unpack .../220-libtasn1-6-dev_4.19.0-3+b3_arm64.deb ... Unpacking libtasn1-6-dev:arm64 (4.19.0-3+b3) ... Selecting previously unselected package nettle-dev:arm64. Preparing to unpack .../221-nettle-dev_3.10-1+b1_arm64.deb ... Unpacking nettle-dev:arm64 (3.10-1+b1) ... Selecting previously unselected package libgnutls28-dev:arm64. Preparing to unpack .../222-libgnutls28-dev_3.8.6-2+b1_arm64.deb ... Unpacking libgnutls28-dev:arm64 (3.8.6-2+b1) ... Selecting previously unselected package librtmp-dev:arm64. Preparing to unpack .../223-librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5_arm64.deb ... Unpacking librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssl-dev:arm64. Preparing to unpack .../224-libssl-dev_3.3.2-2_arm64.deb ... Unpacking libssl-dev:arm64 (3.3.2-2) ... Selecting previously unselected package libssh2-1-dev:arm64. Preparing to unpack .../225-libssh2-1-dev_1.11.1-1_arm64.deb ... Unpacking libssh2-1-dev:arm64 (1.11.1-1) ... Selecting previously unselected package libzstd-dev:arm64. Preparing to unpack .../226-libzstd-dev_1.5.6+dfsg-1+b1_arm64.deb ... Unpacking libzstd-dev:arm64 (1.5.6+dfsg-1+b1) ... Selecting previously unselected package libcurl4-openssl-dev:arm64. Preparing to unpack .../227-libcurl4-openssl-dev_8.10.1-2_arm64.deb ... Unpacking libcurl4-openssl-dev:arm64 (8.10.1-2) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../228-libhdf5-dev_1.10.10+repack-4_arm64.deb ... Unpacking libhdf5-dev (1.10.10+repack-4) ... Selecting previously unselected package libcbf-dev:arm64. Preparing to unpack .../229-libcbf-dev_0.9.7+dfsg1-4_arm64.deb ... Unpacking libcbf-dev:arm64 (0.9.7+dfsg1-4) ... Selecting previously unselected package libccp4-data. Preparing to unpack .../230-libccp4-data_8.0.0-4_all.deb ... Unpacking libccp4-data (8.0.0-4) ... Selecting previously unselected package libccp4c0t64:arm64. Preparing to unpack .../231-libccp4c0t64_8.0.0-4_arm64.deb ... Unpacking libccp4c0t64:arm64 (8.0.0-4) ... Selecting previously unselected package libmmdb2-0:arm64. Preparing to unpack .../232-libmmdb2-0_2.0.22-1+b2_arm64.deb ... Unpacking libmmdb2-0:arm64 (2.0.22-1+b2) ... Selecting previously unselected package libccp4f0t64:arm64. Preparing to unpack .../233-libccp4f0t64_8.0.0-4_arm64.deb ... Unpacking libccp4f0t64:arm64 (8.0.0-4) ... Selecting previously unselected package libccp4-dev:arm64. Preparing to unpack .../234-libccp4-dev_8.0.0-4_arm64.deb ... Unpacking libccp4-dev:arm64 (8.0.0-4) ... Selecting previously unselected package sfftw2. Preparing to unpack .../235-sfftw2_2.1.5-7_arm64.deb ... Unpacking sfftw2 (2.1.5-7) ... Selecting previously unselected package libclipper2:arm64. Preparing to unpack .../236-libclipper2_2.1.20201109-2+b3_arm64.deb ... Unpacking libclipper2:arm64 (2.1.20201109-2+b3) ... Selecting previously unselected package libmmdb2-dev. Preparing to unpack .../237-libmmdb2-dev_2.0.22-1+b2_arm64.deb ... Unpacking libmmdb2-dev (2.0.22-1+b2) ... Selecting previously unselected package sfftw-dev. Preparing to unpack .../238-sfftw-dev_2.1.5-7_arm64.deb ... Unpacking sfftw-dev (2.1.5-7) ... Selecting previously unselected package libclipper-dev:arm64. Preparing to unpack .../239-libclipper-dev_2.1.20201109-2+b3_arm64.deb ... Unpacking libclipper-dev:arm64 (2.1.20201109-2+b3) ... Selecting previously unselected package libcloudproviders0:arm64. Preparing to unpack .../240-libcloudproviders0_0.3.6-1+b1_arm64.deb ... Unpacking libcloudproviders0:arm64 (0.3.6-1+b1) ... Selecting previously unselected package liblcms2-2:arm64. Preparing to unpack .../241-liblcms2-2_2.16-2_arm64.deb ... Unpacking liblcms2-2:arm64 (2.16-2) ... Selecting previously unselected package libcolord2:arm64. Preparing to unpack .../242-libcolord2_1.4.7-1+b2_arm64.deb ... Unpacking libcolord2:arm64 (1.4.7-1+b2) ... Selecting previously unselected package libcups2t64:arm64. Preparing to unpack .../243-libcups2t64_2.4.10-2_arm64.deb ... Unpacking libcups2t64:arm64 (2.4.10-2) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../244-libnghttp3-9_1.4.0-1+b1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.4.0-1+b1) ... Selecting previously unselected package libngtcp2-16:arm64. Preparing to unpack .../245-libngtcp2-16_1.6.0-1_arm64.deb ... Unpacking libngtcp2-16:arm64 (1.6.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:arm64. Preparing to unpack .../246-libngtcp2-crypto-gnutls8_1.6.0-1_arm64.deb ... Unpacking libngtcp2-crypto-gnutls8:arm64 (1.6.0-1) ... Selecting previously unselected package libcurl3t64-gnutls:arm64. Preparing to unpack .../247-libcurl3t64-gnutls_8.10.1-2_arm64.deb ... Unpacking libcurl3t64-gnutls:arm64 (8.10.1-2) ... Selecting previously unselected package libdatrie1:arm64. Preparing to unpack .../248-libdatrie1_0.2.13-3+b1_arm64.deb ... Unpacking libdatrie1:arm64 (0.2.13-3+b1) ... Selecting previously unselected package libdeflate-dev:arm64. Preparing to unpack .../249-libdeflate-dev_1.22-1_arm64.deb ... Unpacking libdeflate-dev:arm64 (1.22-1) ... Selecting previously unselected package libdouble-conversion3:arm64. Preparing to unpack .../250-libdouble-conversion3_3.3.0-1+b2_arm64.deb ... Unpacking libdouble-conversion3:arm64 (3.3.0-1+b2) ... Selecting previously unselected package libdrm-radeon1:arm64. Preparing to unpack .../251-libdrm-radeon1_2.4.123-1_arm64.deb ... Unpacking libdrm-radeon1:arm64 (2.4.123-1) ... Selecting previously unselected package libwayland-server0:arm64. Preparing to unpack .../252-libwayland-server0_1.23.0-1+b1_arm64.deb ... Unpacking libwayland-server0:arm64 (1.23.0-1+b1) ... Selecting previously unselected package libxcb-randr0:arm64. Preparing to unpack .../253-libxcb-randr0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-randr0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libglapi-mesa:arm64. Preparing to unpack .../254-libglapi-mesa_24.2.4-1_arm64.deb ... Unpacking libglapi-mesa:arm64 (24.2.4-1) ... Selecting previously unselected package libllvm19:arm64. Preparing to unpack .../255-libllvm19_1%3a19.1.2-2_arm64.deb ... Unpacking libllvm19:arm64 (1:19.1.2-2) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../256-libsensors-config_1%3a3.6.0-10_all.deb ... Unpacking libsensors-config (1:3.6.0-10) ... Selecting previously unselected package libsensors5:arm64. Preparing to unpack .../257-libsensors5_1%3a3.6.0-10+b1_arm64.deb ... Unpacking libsensors5:arm64 (1:3.6.0-10+b1) ... Selecting previously unselected package libx11-xcb1:arm64. Preparing to unpack .../258-libx11-xcb1_2%3a1.8.7-1+b1_arm64.deb ... Unpacking libx11-xcb1:arm64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxcb-dri2-0:arm64. Preparing to unpack .../259-libxcb-dri2-0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-dri2-0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-dri3-0:arm64. Preparing to unpack .../260-libxcb-dri3-0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-dri3-0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-present0:arm64. Preparing to unpack .../261-libxcb-present0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-present0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-sync1:arm64. Preparing to unpack .../262-libxcb-sync1_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-sync1:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xfixes0:arm64. Preparing to unpack .../263-libxcb-xfixes0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-xfixes0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxshmfence1:arm64. Preparing to unpack .../264-libxshmfence1_1.3-1+b2_arm64.deb ... Unpacking libxshmfence1:arm64 (1.3-1+b2) ... Selecting previously unselected package mesa-libgallium:arm64. Preparing to unpack .../265-mesa-libgallium_24.2.4-1_arm64.deb ... Unpacking mesa-libgallium:arm64 (24.2.4-1) ... Selecting previously unselected package libgbm1:arm64. Preparing to unpack .../266-libgbm1_24.2.4-1_arm64.deb ... Unpacking libgbm1:arm64 (24.2.4-1) ... Selecting previously unselected package libwayland-client0:arm64. Preparing to unpack .../267-libwayland-client0_1.23.0-1+b1_arm64.deb ... Unpacking libwayland-client0:arm64 (1.23.0-1+b1) ... Selecting previously unselected package libegl-mesa0:arm64. Preparing to unpack .../268-libegl-mesa0_24.2.4-1_arm64.deb ... Unpacking libegl-mesa0:arm64 (24.2.4-1) ... Selecting previously unselected package libeigen3-dev. Preparing to unpack .../269-libeigen3-dev_3.4.0-4_all.deb ... Unpacking libeigen3-dev (3.4.0-4) ... Selecting previously unselected package libepoxy0:arm64. Preparing to unpack .../270-libepoxy0_1.5.10-2_arm64.deb ... Unpacking libepoxy0:arm64 (1.5.10-2) ... Selecting previously unselected package libevdev2:arm64. Preparing to unpack .../271-libevdev2_1.13.3+dfsg-1_arm64.deb ... Unpacking libevdev2:arm64 (1.13.3+dfsg-1) ... Selecting previously unselected package libfftw3-double3:arm64. Preparing to unpack .../272-libfftw3-double3_3.3.10-1+b3_arm64.deb ... Unpacking libfftw3-double3:arm64 (3.3.10-1+b3) ... Selecting previously unselected package libfftw3-long3:arm64. Preparing to unpack .../273-libfftw3-long3_3.3.10-1+b3_arm64.deb ... Unpacking libfftw3-long3:arm64 (3.3.10-1+b3) ... Selecting previously unselected package libfftw3-single3:arm64. Preparing to unpack .../274-libfftw3-single3_3.3.10-1+b3_arm64.deb ... Unpacking libfftw3-single3:arm64 (3.3.10-1+b3) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../275-libfftw3-bin_3.3.10-1+b3_arm64.deb ... Unpacking libfftw3-bin (3.3.10-1+b3) ... Selecting previously unselected package libfftw3-dev:arm64. Preparing to unpack .../276-libfftw3-dev_3.3.10-1+b3_arm64.deb ... Unpacking libfftw3-dev:arm64 (3.3.10-1+b3) ... Selecting previously unselected package libfribidi0:arm64. Preparing to unpack .../277-libfribidi0_1.0.15-1_arm64.deb ... Unpacking libfribidi0:arm64 (1.0.15-1) ... Selecting previously unselected package libglvnd0:arm64. Preparing to unpack .../278-libglvnd0_1.7.0-1+b2_arm64.deb ... Unpacking libglvnd0:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libxcb-glx0:arm64. Preparing to unpack .../279-libxcb-glx0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-glx0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxfixes3:arm64. Preparing to unpack .../280-libxfixes3_1%3a6.0.0-2+b2_arm64.deb ... Unpacking libxfixes3:arm64 (1:6.0.0-2+b2) ... Selecting previously unselected package libxxf86vm1:arm64. Preparing to unpack .../281-libxxf86vm1_1%3a1.1.4-1+b3_arm64.deb ... Unpacking libxxf86vm1:arm64 (1:1.1.4-1+b3) ... Selecting previously unselected package libvulkan1:arm64. Preparing to unpack .../282-libvulkan1_1.3.296.0-1_arm64.deb ... Unpacking libvulkan1:arm64 (1.3.296.0-1) ... Selecting previously unselected package libgl1-mesa-dri:arm64. Preparing to unpack .../283-libgl1-mesa-dri_24.2.4-1_arm64.deb ... Unpacking libgl1-mesa-dri:arm64 (24.2.4-1) ... Selecting previously unselected package libglx-mesa0:arm64. Preparing to unpack .../284-libglx-mesa0_24.2.4-1_arm64.deb ... Unpacking libglx-mesa0:arm64 (24.2.4-1) ... Selecting previously unselected package libglx0:arm64. Preparing to unpack .../285-libglx0_1.7.0-1+b2_arm64.deb ... Unpacking libglx0:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libgl1:arm64. Preparing to unpack .../286-libgl1_1.7.0-1+b2_arm64.deb ... Unpacking libgl1:arm64 (1.7.0-1+b2) ... Selecting previously unselected package xorg-sgml-doctools. Preparing to unpack .../287-xorg-sgml-doctools_1%3a1.11-1.1_all.deb ... Unpacking xorg-sgml-doctools (1:1.11-1.1) ... Selecting previously unselected package x11proto-dev. Preparing to unpack .../288-x11proto-dev_2024.1-1_all.deb ... Unpacking x11proto-dev (2024.1-1) ... Selecting previously unselected package libxau-dev:arm64. Preparing to unpack .../289-libxau-dev_1%3a1.0.11-1_arm64.deb ... Unpacking libxau-dev:arm64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp-dev:arm64. Preparing to unpack .../290-libxdmcp-dev_1%3a1.1.2-3+b2_arm64.deb ... Unpacking libxdmcp-dev:arm64 (1:1.1.2-3+b2) ... Selecting previously unselected package xtrans-dev. Preparing to unpack .../291-xtrans-dev_1.4.0-1_all.deb ... Unpacking xtrans-dev (1.4.0-1) ... Selecting previously unselected package libxcb1-dev:arm64. Preparing to unpack .../292-libxcb1-dev_1.17.0-2+b1_arm64.deb ... Unpacking libxcb1-dev:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-dev:arm64. Preparing to unpack .../293-libx11-dev_2%3a1.8.7-1+b1_arm64.deb ... Unpacking libx11-dev:arm64 (2:1.8.7-1+b1) ... Selecting previously unselected package libglx-dev:arm64. Preparing to unpack .../294-libglx-dev_1.7.0-1+b2_arm64.deb ... Unpacking libglx-dev:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libgl-dev:arm64. Preparing to unpack .../295-libgl-dev_1.7.0-1+b2_arm64.deb ... Unpacking libgl-dev:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libglew2.2:arm64. Preparing to unpack .../296-libglew2.2_2.2.0-4+b2_arm64.deb ... Unpacking libglew2.2:arm64 (2.2.0-4+b2) ... Selecting previously unselected package libopengl0:arm64. Preparing to unpack .../297-libopengl0_1.7.0-1+b2_arm64.deb ... Unpacking libopengl0:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libglu1-mesa:arm64. Preparing to unpack .../298-libglu1-mesa_9.0.2-1.1+b2_arm64.deb ... Unpacking libglu1-mesa:arm64 (9.0.2-1.1+b2) ... Selecting previously unselected package libopengl-dev:arm64. Preparing to unpack .../299-libopengl-dev_1.7.0-1+b2_arm64.deb ... Unpacking libopengl-dev:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libglu1-mesa-dev:arm64. Preparing to unpack .../300-libglu1-mesa-dev_9.0.2-1.1+b2_arm64.deb ... Unpacking libglu1-mesa-dev:arm64 (9.0.2-1.1+b2) ... Selecting previously unselected package libgraphite2-3:arm64. Preparing to unpack .../301-libgraphite2-3_1.3.14-2+b1_arm64.deb ... Unpacking libgraphite2-3:arm64 (1.3.14-2+b1) ... Selecting previously unselected package libharfbuzz0b:arm64. Preparing to unpack .../302-libharfbuzz0b_10.0.1-1_arm64.deb ... Unpacking libharfbuzz0b:arm64 (10.0.1-1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../303-libthai-data_0.1.29-2_all.deb ... Unpacking libthai-data (0.1.29-2) ... Selecting previously unselected package libthai0:arm64. Preparing to unpack .../304-libthai0_0.1.29-2+b1_arm64.deb ... Unpacking libthai0:arm64 (0.1.29-2+b1) ... Selecting previously unselected package libpango-1.0-0:arm64. Preparing to unpack .../305-libpango-1.0-0_1.54.0+ds-3_arm64.deb ... Unpacking libpango-1.0-0:arm64 (1.54.0+ds-3) ... Selecting previously unselected package libpangoft2-1.0-0:arm64. Preparing to unpack .../306-libpangoft2-1.0-0_1.54.0+ds-3_arm64.deb ... Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-3) ... Selecting previously unselected package libpangocairo-1.0-0:arm64. Preparing to unpack .../307-libpangocairo-1.0-0_1.54.0+ds-3_arm64.deb ... Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ... Selecting previously unselected package libwayland-cursor0:arm64. Preparing to unpack .../308-libwayland-cursor0_1.23.0-1+b1_arm64.deb ... Unpacking libwayland-cursor0:arm64 (1.23.0-1+b1) ... Selecting previously unselected package libwayland-egl1:arm64. Preparing to unpack .../309-libwayland-egl1_1.23.0-1+b1_arm64.deb ... Unpacking libwayland-egl1:arm64 (1.23.0-1+b1) ... Selecting previously unselected package libxcomposite1:arm64. Preparing to unpack .../310-libxcomposite1_1%3a0.4.6-1_arm64.deb ... Unpacking libxcomposite1:arm64 (1:0.4.6-1) ... Selecting previously unselected package libxcursor1:arm64. Preparing to unpack .../311-libxcursor1_1%3a1.2.2-1+b1_arm64.deb ... Unpacking libxcursor1:arm64 (1:1.2.2-1+b1) ... Selecting previously unselected package libxdamage1:arm64. Preparing to unpack .../312-libxdamage1_1%3a1.1.6-1+b2_arm64.deb ... Unpacking libxdamage1:arm64 (1:1.1.6-1+b2) ... Selecting previously unselected package libxinerama1:arm64. Preparing to unpack .../313-libxinerama1_2%3a1.1.4-3+b2_arm64.deb ... Unpacking libxinerama1:arm64 (2:1.1.4-3+b2) ... Selecting previously unselected package xkb-data. Preparing to unpack .../314-xkb-data_2.42-1_all.deb ... Unpacking xkb-data (2.42-1) ... Selecting previously unselected package libxkbcommon0:arm64. Preparing to unpack .../315-libxkbcommon0_1.6.0-1+b2_arm64.deb ... Unpacking libxkbcommon0:arm64 (1.6.0-1+b2) ... Selecting previously unselected package libxrandr2:arm64. Preparing to unpack .../316-libxrandr2_2%3a1.5.4-1+b1_arm64.deb ... Unpacking libxrandr2:arm64 (2:1.5.4-1+b1) ... Selecting previously unselected package libgtk-3-common. Preparing to unpack .../317-libgtk-3-common_3.24.43-4_all.deb ... Unpacking libgtk-3-common (3.24.43-4) ... Selecting previously unselected package libgtk-3-0t64:arm64. Preparing to unpack .../318-libgtk-3-0t64_3.24.43-4_arm64.deb ... Unpacking libgtk-3-0t64:arm64 (3.24.43-4) ... Selecting previously unselected package libgudev-1.0-0:arm64. Preparing to unpack .../319-libgudev-1.0-0_238-5+b1_arm64.deb ... Unpacking libgudev-1.0-0:arm64 (238-5+b1) ... Selecting previously unselected package libice6:arm64. Preparing to unpack .../320-libice6_2%3a1.1.1-1_arm64.deb ... Unpacking libice6:arm64 (2:1.1.1-1) ... Selecting previously unselected package libimagequant0:arm64. Preparing to unpack .../321-libimagequant0_2.18.0-1+b2_arm64.deb ... Unpacking libimagequant0:arm64 (2.18.0-1+b2) ... Selecting previously unselected package libwacom-common. Preparing to unpack .../322-libwacom-common_2.13.0-1_all.deb ... Unpacking libwacom-common (2.13.0-1) ... Selecting previously unselected package libwacom9:arm64. Preparing to unpack .../323-libwacom9_2.13.0-1_arm64.deb ... Unpacking libwacom9:arm64 (2.13.0-1) ... Selecting previously unselected package libinput-bin. Preparing to unpack .../324-libinput-bin_1.26.2-1_arm64.deb ... Unpacking libinput-bin (1.26.2-1) ... Selecting previously unselected package libmtdev1t64:arm64. Preparing to unpack .../325-libmtdev1t64_1.1.6-1.2+b1_arm64.deb ... Unpacking libmtdev1t64:arm64 (1.1.6-1.2+b1) ... Selecting previously unselected package libinput10:arm64. Preparing to unpack .../326-libinput10_1.26.2-1_arm64.deb ... Unpacking libinput10:arm64 (1.26.2-1) ... Selecting previously unselected package libjbig-dev:arm64. Preparing to unpack .../327-libjbig-dev_2.1-6.1+b2_arm64.deb ... Unpacking libjbig-dev:arm64 (2.1-6.1+b2) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../328-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package liblapack3:arm64. Preparing to unpack .../329-liblapack3_3.12.0-3+b1_arm64.deb ... Unpacking liblapack3:arm64 (3.12.0-3+b1) ... Selecting previously unselected package liblbfgsb0:arm64. Preparing to unpack .../330-liblbfgsb0_3.0+dfsg.4-1+b2_arm64.deb ... Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1+b2) ... Selecting previously unselected package liblerc-dev:arm64. Preparing to unpack .../331-liblerc-dev_4.0.0+ds-4+b2_arm64.deb ... Unpacking liblerc-dev:arm64 (4.0.0+ds-4+b2) ... Selecting previously unselected package liblz4-dev:arm64. Preparing to unpack .../332-liblz4-dev_1.9.4-3+b1_arm64.deb ... Unpacking liblz4-dev:arm64 (1.9.4-3+b1) ... Selecting previously unselected package liblzf1:arm64. Preparing to unpack .../333-liblzf1_3.6-4+b2_arm64.deb ... Unpacking liblzf1:arm64 (3.6-4+b2) ... Selecting previously unselected package liblzma-dev:arm64. Preparing to unpack .../334-liblzma-dev_5.6.3-1+b1_arm64.deb ... Unpacking liblzma-dev:arm64 (5.6.3-1+b1) ... Selecting previously unselected package libmd4c0:arm64. Preparing to unpack .../335-libmd4c0_0.5.2-2+b1_arm64.deb ... Unpacking libmd4c0:arm64 (0.5.2-2+b1) ... Selecting previously unselected package libnetcdf19t64:arm64. Preparing to unpack .../336-libnetcdf19t64_1%3a4.9.2-7_arm64.deb ... Unpacking libnetcdf19t64:arm64 (1:4.9.2-7) ... Selecting previously unselected package libnotify4:arm64. Preparing to unpack .../337-libnotify4_0.8.3-1+b2_arm64.deb ... Unpacking libnotify4:arm64 (0.8.3-1+b2) ... Selecting previously unselected package libopenjp2-7:arm64. Preparing to unpack .../338-libopenjp2-7_2.5.0-2+b4_arm64.deb ... Unpacking libopenjp2-7:arm64 (2.5.0-2+b4) ... Selecting previously unselected package libpcre2-16-0:arm64. Preparing to unpack .../339-libpcre2-16-0_10.42-4+b2_arm64.deb ... Unpacking libpcre2-16-0:arm64 (10.42-4+b2) ... Selecting previously unselected package libpcre2-32-0:arm64. Preparing to unpack .../340-libpcre2-32-0_10.42-4+b2_arm64.deb ... Unpacking libpcre2-32-0:arm64 (10.42-4+b2) ... Selecting previously unselected package libpython3-all-dev:arm64. Preparing to unpack .../341-libpython3-all-dev_3.12.6-1_arm64.deb ... Unpacking libpython3-all-dev:arm64 (3.12.6-1) ... Selecting previously unselected package libqhull-r8.0:arm64. Preparing to unpack .../342-libqhull-r8.0_2020.2-6+b2_arm64.deb ... Unpacking libqhull-r8.0:arm64 (2020.2-6+b2) ... Selecting previously unselected package libqt5core5t64:arm64. Preparing to unpack .../343-libqt5core5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5core5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5dbus5t64:arm64. Preparing to unpack .../344-libqt5dbus5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5dbus5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libegl1:arm64. Preparing to unpack .../345-libegl1_1.7.0-1+b2_arm64.deb ... Unpacking libegl1:arm64 (1.7.0-1+b2) ... Selecting previously unselected package libqt5network5t64:arm64. Preparing to unpack .../346-libqt5network5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5network5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libsm6:arm64. Preparing to unpack .../347-libsm6_2%3a1.2.4-1_arm64.deb ... Unpacking libsm6:arm64 (2:1.2.4-1) ... Selecting previously unselected package libxcb-icccm4:arm64. Preparing to unpack .../348-libxcb-icccm4_0.4.2-1_arm64.deb ... Unpacking libxcb-icccm4:arm64 (0.4.2-1) ... Selecting previously unselected package libxcb-util1:arm64. Preparing to unpack .../349-libxcb-util1_0.4.0-1+b2_arm64.deb ... Unpacking libxcb-util1:arm64 (0.4.0-1+b2) ... Selecting previously unselected package libxcb-image0:arm64. Preparing to unpack .../350-libxcb-image0_0.4.0-2+b2_arm64.deb ... Unpacking libxcb-image0:arm64 (0.4.0-2+b2) ... Selecting previously unselected package libxcb-keysyms1:arm64. Preparing to unpack .../351-libxcb-keysyms1_0.4.0-1+b3_arm64.deb ... Unpacking libxcb-keysyms1:arm64 (0.4.0-1+b3) ... Selecting previously unselected package libxcb-render-util0:arm64. Preparing to unpack .../352-libxcb-render-util0_0.3.9-1+b2_arm64.deb ... Unpacking libxcb-render-util0:arm64 (0.3.9-1+b2) ... Selecting previously unselected package libxcb-shape0:arm64. Preparing to unpack .../353-libxcb-shape0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-shape0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xinerama0:arm64. Preparing to unpack .../354-libxcb-xinerama0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-xinerama0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xinput0:arm64. Preparing to unpack .../355-libxcb-xinput0_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-xinput0:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-xkb1:arm64. Preparing to unpack .../356-libxcb-xkb1_1.17.0-2+b1_arm64.deb ... Unpacking libxcb-xkb1:arm64 (1.17.0-2+b1) ... Selecting previously unselected package libxkbcommon-x11-0:arm64. Preparing to unpack .../357-libxkbcommon-x11-0_1.6.0-1+b2_arm64.deb ... Unpacking libxkbcommon-x11-0:arm64 (1.6.0-1+b2) ... Selecting previously unselected package libqt5gui5t64:arm64. Preparing to unpack .../358-libqt5gui5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5gui5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5widgets5t64:arm64. Preparing to unpack .../359-libqt5widgets5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5widgets5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5xml5t64:arm64. Preparing to unpack .../360-libqt5xml5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5xml5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5designer5:arm64. Preparing to unpack .../361-libqt5designer5_5.15.15-2_arm64.deb ... Unpacking libqt5designer5:arm64 (5.15.15-2) ... Selecting previously unselected package libqt5sql5t64:arm64. Preparing to unpack .../362-libqt5sql5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5sql5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5help5:arm64. Preparing to unpack .../363-libqt5help5_5.15.15-2_arm64.deb ... Unpacking libqt5help5:arm64 (5.15.15-2) ... Selecting previously unselected package libqt5opengl5t64:arm64. Preparing to unpack .../364-libqt5opengl5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5opengl5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5printsupport5t64:arm64. Preparing to unpack .../365-libqt5printsupport5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5printsupport5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libqt5test5t64:arm64. Preparing to unpack .../366-libqt5test5t64_5.15.15+dfsg-2_arm64.deb ... Unpacking libqt5test5t64:arm64 (5.15.15+dfsg-2) ... Selecting previously unselected package libraqm0:arm64. Preparing to unpack .../367-libraqm0_0.10.1-1+b2_arm64.deb ... Unpacking libraqm0:arm64 (0.10.1-1+b2) ... Selecting previously unselected package libsharpyuv-dev:arm64. Preparing to unpack .../368-libsharpyuv-dev_1.4.0-0.1+b1_arm64.deb ... Unpacking libsharpyuv-dev:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libssm2:arm64. Preparing to unpack .../369-libssm2_1.4.0-2+b3_arm64.deb ... Unpacking libssm2:arm64 (1.4.0-2+b3) ... Selecting previously unselected package libssm-dev:arm64. Preparing to unpack .../370-libssm-dev_1.4.0-2+b3_arm64.deb ... Unpacking libssm-dev:arm64 (1.4.0-2+b3) ... Selecting previously unselected package libwebpdemux2:arm64. Preparing to unpack .../371-libwebpdemux2_1.4.0-0.1+b1_arm64.deb ... Unpacking libwebpdemux2:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libwebpmux3:arm64. Preparing to unpack .../372-libwebpmux3_1.4.0-0.1+b1_arm64.deb ... Unpacking libwebpmux3:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libwebpdecoder3:arm64. Preparing to unpack .../373-libwebpdecoder3_1.4.0-0.1+b1_arm64.deb ... Unpacking libwebpdecoder3:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libwebp-dev:arm64. Preparing to unpack .../374-libwebp-dev_1.4.0-0.1+b1_arm64.deb ... Unpacking libwebp-dev:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libtiffxx6:arm64. Preparing to unpack .../375-libtiffxx6_4.5.1+git230720-5_arm64.deb ... Unpacking libtiffxx6:arm64 (4.5.1+git230720-5) ... Selecting previously unselected package libtiff-dev:arm64. Preparing to unpack .../376-libtiff-dev_4.5.1+git230720-5_arm64.deb ... Unpacking libtiff-dev:arm64 (4.5.1+git230720-5) ... Selecting previously unselected package libwxbase3.2-1t64:arm64. Preparing to unpack .../377-libwxbase3.2-1t64_3.2.6+dfsg-2_arm64.deb ... Unpacking libwxbase3.2-1t64:arm64 (3.2.6+dfsg-2) ... Selecting previously unselected package libxtst6:arm64. Preparing to unpack .../378-libxtst6_2%3a1.2.3-1.1+b2_arm64.deb ... Unpacking libxtst6:arm64 (2:1.2.3-1.1+b2) ... Selecting previously unselected package libwxgtk3.2-1t64:arm64. Preparing to unpack .../379-libwxgtk3.2-1t64_3.2.6+dfsg-2_arm64.deb ... Unpacking libwxgtk3.2-1t64:arm64 (3.2.6+dfsg-2) ... Selecting previously unselected package libwxgtk-gl3.2-1t64:arm64. Preparing to unpack .../380-libwxgtk-gl3.2-1t64_3.2.6+dfsg-2_arm64.deb ... Unpacking libwxgtk-gl3.2-1t64:arm64 (3.2.6+dfsg-2) ... Selecting previously unselected package libxslt1.1:arm64. Preparing to unpack .../381-libxslt1.1_1.1.35-1.1+b1_arm64.deb ... Unpacking libxslt1.1:arm64 (1.1.35-1.1+b1) ... Selecting previously unselected package pybind11-dev. Preparing to unpack .../382-pybind11-dev_2.13.6-1_all.deb ... Unpacking pybind11-dev (2.13.6-1) ... Selecting previously unselected package pymol-data. Preparing to unpack .../383-pymol-data_3.0.0+dfsg-1_all.deb ... Unpacking pymol-data (3.0.0+dfsg-1) ... Selecting previously unselected package python-matplotlib-data. Preparing to unpack .../384-python-matplotlib-data_3.8.3-3_all.deb ... Unpacking python-matplotlib-data (3.8.3-3) ... Selecting previously unselected package python3-all. Preparing to unpack .../385-python3-all_3.12.6-1_arm64.deb ... Unpacking python3-all (3.12.6-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../386-python3-all-dev_3.12.6-1_arm64.deb ... Unpacking python3-all-dev (3.12.6-1) ... Selecting previously unselected package python3-appdirs. Preparing to unpack .../387-python3-appdirs_1.4.4-4_all.deb ... Unpacking python3-appdirs (1.4.4-4) ... Selecting previously unselected package python3-attr. Preparing to unpack .../388-python3-attr_23.2.0-2_all.deb ... Unpacking python3-attr (23.2.0-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../389-python3-numpy_1%3a1.26.4+ds-11_arm64.deb ... Unpacking python3-numpy (1:1.26.4+ds-11) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../390-python3-chardet_5.2.0+dfsg-1_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-1) ... Selecting previously unselected package python3.12-tk. Preparing to unpack .../391-python3.12-tk_3.12.6-1_arm64.deb ... Unpacking python3.12-tk (3.12.6-1) ... Selecting previously unselected package python3.13-tk. Preparing to unpack .../392-python3.13-tk_3.13.0-1_arm64.deb ... Unpacking python3.13-tk (3.13.0-1) ... Selecting previously unselected package python3-tk:arm64. Preparing to unpack .../393-python3-tk_3.12.6-1_arm64.deb ... Unpacking python3-tk:arm64 (3.12.6-1) ... Selecting previously unselected package python3-pil.imagetk:arm64. Preparing to unpack .../394-python3-pil.imagetk_10.4.0-1_arm64.deb ... Unpacking python3-pil.imagetk:arm64 (10.4.0-1) ... Selecting previously unselected package python3-pil:arm64. Preparing to unpack .../395-python3-pil_10.4.0-1_arm64.deb ... Unpacking python3-pil:arm64 (10.4.0-1) ... Selecting previously unselected package python3-cairo. Preparing to unpack .../396-python3-cairo_1.26.1-2_arm64.deb ... Unpacking python3-cairo (1.26.1-2) ... Selecting previously unselected package python3-freetype. Preparing to unpack .../397-python3-freetype_2.5.1-1_all.deb ... Unpacking python3-freetype (2.5.1-1) ... Selecting previously unselected package python3-rlpycairo. Preparing to unpack .../398-python3-rlpycairo_0.3.0-3_all.deb ... Unpacking python3-rlpycairo (0.3.0-3) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../399-python3-reportlab_4.2.5-1_all.deb ... Unpacking python3-reportlab (4.2.5-1) ... Selecting previously unselected package xml-core. Preparing to unpack .../400-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../401-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../402-python3-biopython_1.84+dfsg-4_arm64.deb ... Unpacking python3-biopython (1.84+dfsg-4) ... Selecting previously unselected package python3-brotli. Preparing to unpack .../403-python3-brotli_1.1.0-2+b5_arm64.deb ... Unpacking python3-brotli (1.1.0-2+b5) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../404-python3-certifi_2024.8.30+dfsg-1_all.deb ... Unpacking python3-certifi (2024.8.30+dfsg-1) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../405-python3-charset-normalizer_3.4.0-1_arm64.deb ... Unpacking python3-charset-normalizer (3.4.0-1) ... Selecting previously unselected package python3-contourpy. Preparing to unpack .../406-python3-contourpy_1.3.0-2_arm64.deb ... Unpacking python3-contourpy (1.3.0-2) ... Selecting previously unselected package python3-cycler. Preparing to unpack .../407-python3-cycler_0.12.1-1_all.deb ... Unpacking python3-cycler (0.12.1-1) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../408-python3-dateutil_2.9.0-3_all.deb ... Unpacking python3-dateutil (2.9.0-3) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../409-python3-decorator_5.1.1-5_all.deb ... Unpacking python3-decorator (5.1.1-5) ... Selecting previously unselected package python3-flexcache. Preparing to unpack .../410-python3-flexcache_0.3-2_all.deb ... Unpacking python3-flexcache (0.3-2) ... Selecting previously unselected package python3-flexparser. Preparing to unpack .../411-python3-flexparser_0.3.1-2_all.deb ... Unpacking python3-flexparser (0.3.1-2) ... Selecting previously unselected package python3-tz. Preparing to unpack .../412-python3-tz_2024.1-2_all.deb ... Unpacking python3-tz (2024.1-2) ... Selecting previously unselected package python3-six. Preparing to unpack .../413-python3-six_1.16.0-7_all.deb ... Unpacking python3-six (1.16.0-7) ... Selecting previously unselected package python3-fs. Preparing to unpack .../414-python3-fs_2.4.16-4_all.deb ... Unpacking python3-fs (2.4.16-4) ... Selecting previously unselected package python3-lxml:arm64. Preparing to unpack .../415-python3-lxml_5.3.0-1_arm64.deb ... Unpacking python3-lxml:arm64 (5.3.0-1) ... Selecting previously unselected package python3-lz4. Preparing to unpack .../416-python3-lz4_4.0.2+dfsg-1+b5_arm64.deb ... Unpacking python3-lz4 (4.0.2+dfsg-1+b5) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../417-python3-scipy_1.13.1-5_arm64.deb ... Unpacking python3-scipy (1.13.1-5) ... Selecting previously unselected package python3-mpmath. Preparing to unpack .../418-python3-mpmath_1.3.0-1_all.deb ... Unpacking python3-mpmath (1.3.0-1) ... Selecting previously unselected package python3-sympy. Preparing to unpack .../419-python3-sympy_1.13.3-1_all.deb ... Unpacking python3-sympy (1.13.3-1) ... Selecting previously unselected package python3-ufolib2. Preparing to unpack .../420-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... Selecting previously unselected package unicode-data. Preparing to unpack .../421-unicode-data_15.1.0-1_all.deb ... Unpacking unicode-data (15.1.0-1) ... Selecting previously unselected package python3-fonttools. Preparing to unpack .../422-python3-fonttools_4.54.1-4_arm64.deb ... Unpacking python3-fonttools (4.54.1-4) ... Selecting previously unselected package python3-h5py-serial. Preparing to unpack .../423-python3-h5py-serial_3.11.0-5_arm64.deb ... Unpacking python3-h5py-serial (3.11.0-5) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../424-python3-h5py_3.11.0-5_all.deb ... Unpacking python3-h5py (3.11.0-5) ... Selecting previously unselected package python3-hdf5plugin. Preparing to unpack .../425-python3-hdf5plugin_4.0.1-3_all.deb ... Unpacking python3-hdf5plugin (4.0.1-3) ... Selecting previously unselected package python3-idna. Preparing to unpack .../426-python3-idna_3.8-2_all.deb ... Unpacking python3-idna (3.8-2) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../427-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../428-python3-kiwisolver_1.4.7-2_arm64.deb ... Unpacking python3-kiwisolver (1.4.7-2) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../429-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../430-python3-packaging_24.1-1_all.deb ... Unpacking python3-packaging (24.1-1) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../431-python3-matplotlib_3.8.3-3_arm64.deb ... Unpacking python3-matplotlib (3.8.3-3) ... Selecting previously unselected package sphinx-rtd-theme-common. Preparing to unpack .../432-sphinx-rtd-theme-common_3.0.1+dfsg-1_all.deb ... Unpacking sphinx-rtd-theme-common (3.0.1+dfsg-1) ... Selecting previously unselected package python3-mrcfile. Preparing to unpack .../433-python3-mrcfile_1.5.3-3_all.deb ... Unpacking python3-mrcfile (1.5.3-3) ... Selecting previously unselected package python3-msgpack. Preparing to unpack .../434-python3-msgpack_1.0.3-3+b3_arm64.deb ... Unpacking python3-msgpack (1.0.3-3+b3) ... Selecting previously unselected package python3-natsort. Preparing to unpack .../435-python3-natsort_8.0.2-2_all.deb ... Unpacking python3-natsort (8.0.2-2) ... Selecting previously unselected package python3-platformdirs. Preparing to unpack .../436-python3-platformdirs_4.3.6-1_all.deb ... Unpacking python3-platformdirs (4.3.6-1) ... Selecting previously unselected package python3-pint. Preparing to unpack .../437-python3-pint_0.24.3-2_all.deb ... Unpacking python3-pint (0.24.3-2) ... Selecting previously unselected package python3-nxmx. Preparing to unpack .../438-python3-nxmx_0.0.3-3_all.deb ... Unpacking python3-nxmx (0.0.3-3) ... Selecting previously unselected package python3-opengl. Preparing to unpack .../439-python3-opengl_3.1.7+dfsg-1_all.deb ... Unpacking python3-opengl (3.1.7+dfsg-1) ... Selecting previously unselected package python3-ordered-set. Preparing to unpack .../440-python3-ordered-set_4.1.0-1_all.deb ... Unpacking python3-ordered-set (4.1.0-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../441-python3-wheel_0.44.0-2_all.deb ... Unpacking python3-wheel (0.44.0-2) ... Selecting previously unselected package python3-pip. Preparing to unpack .../442-python3-pip_24.3.1+dfsg-1_all.deb ... Unpacking python3-pip (24.3.1+dfsg-1) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../443-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-procrunner. Preparing to unpack .../444-python3-procrunner_2.3.3-2_all.deb ... Unpacking python3-procrunner (2.3.3-2) ... Selecting previously unselected package python3-psutil. Preparing to unpack .../445-python3-psutil_5.9.8-2+b1_arm64.deb ... Unpacking python3-psutil (5.9.8-2+b1) ... Selecting previously unselected package python3-pycbf. Preparing to unpack .../446-python3-pycbf_0.9.7+dfsg1-4_arm64.deb ... Unpacking python3-pycbf (0.9.7+dfsg1-4) ... Selecting previously unselected package python3-pyqt5.sip. Preparing to unpack .../447-python3-pyqt5.sip_12.15.0-1+b1_arm64.deb ... Unpacking python3-pyqt5.sip (12.15.0-1+b1) ... Selecting previously unselected package python3-pyqt5. Preparing to unpack .../448-python3-pyqt5_5.15.11+dfsg-1+b2_arm64.deb ... Unpacking python3-pyqt5 (5.15.11+dfsg-1+b2) ... Selecting previously unselected package python3-pyqt5.qtopengl. Preparing to unpack .../449-python3-pyqt5.qtopengl_5.15.11+dfsg-1+b2_arm64.deb ... Unpacking python3-pyqt5.qtopengl (5.15.11+dfsg-1+b2) ... Selecting previously unselected package python3-pymol. Preparing to unpack .../450-python3-pymol_3.0.0+dfsg-1+b1_arm64.deb ... Unpacking python3-pymol (3.0.0+dfsg-1+b1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../451-python3-pytest_8.3.3-1_all.deb ... Unpacking python3-pytest (8.3.3-1) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../452-python3-urllib3_2.0.7-2_all.deb ... Unpacking python3-urllib3 (2.0.7-2) ... Selecting previously unselected package python3-requests. Preparing to unpack .../453-python3-requests_2.32.3+dfsg-1_all.deb ... Unpacking python3-requests (2.32.3+dfsg-1) ... Selecting previously unselected package python3-tqdm. Preparing to unpack .../454-python3-tqdm_4.66.5-1_all.deb ... Unpacking python3-tqdm (4.66.5-1) ... Selecting previously unselected package python3-wxgtk4.0. Preparing to unpack .../455-python3-wxgtk4.0_4.2.2+dfsg-1_arm64.deb ... Unpacking python3-wxgtk4.0 (4.2.2+dfsg-1) ... Selecting previously unselected package scons. Preparing to unpack .../456-scons_4.8.1+dfsg-1_all.deb ... Unpacking scons (4.8.1+dfsg-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libgraphite2-3:arm64 (1.3.14-2+b1) ... Setting up libboost-python1.83.0 (1.83.0-3.2) ... Setting up libgnutls-openssl27t64:arm64 (3.8.6-2+b1) ... Setting up liblcms2-2:arm64 (2.16-2) ... Setting up libpixman-1-0:arm64 (0.42.2-1+b1) ... Setting up libsharpyuv0:arm64 (1.4.0-0.1+b1) ... Setting up libwayland-server0:arm64 (1.23.0-1+b1) ... Setting up libpciaccess0:arm64 (0.17-3+b2) ... Setting up systemd-sysv (256.7-3) ... Setting up libxau6:arm64 (1:1.0.11-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3+b2) ... Setting up libdouble-conversion3:arm64 (3.3.0-1+b2) ... Setting up libkeyutils1:arm64 (1.6.3-4) ... Setting up libboost1.83-dev:arm64 (1.83.0-3.2) ... Setting up libxcb1:arm64 (1.17.0-2+b1) ... Setting up fonts-lato (2.015-1) ... Setting up libfftw3-single3:arm64 (3.3.10-1+b3) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up libxcb-xfixes0:arm64 (1.17.0-2+b1) ... Setting up libzstd-dev:arm64 (1.5.6+dfsg-1+b1) ... Setting up liblerc4:arm64 (4.0.0+ds-4+b2) ... Setting up libantlr3c-3.4-0:arm64 (3.4+dfsg-4+b2) ... Setting up bsdextrautils (2.40.2-9) ... Setting up hdf5-helpers (1.10.10+repack-4) ... Setting up hicolor-icon-theme (0.18-1) ... Setting up libboost-date-time1.83.0:arm64 (1.83.0-3.2) ... Setting up libantlr3c-dev (3.4+dfsg-4+b2) ... Setting up libxcb-xinput0:arm64 (1.17.0-2+b1) ... Setting up libdatrie1:arm64 (0.2.13-3+b1) ... Setting up libmmdb2-0:arm64 (2.0.22-1+b2) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libboost-timer1.83.0:arm64 (1.83.0-3.2) ... Setting up libxcb-render0:arm64 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up architecture-properties:arm64 (0.2.3) ... Setting up libglvnd0:arm64 (1.7.0-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libxcb-glx0:arm64 (1.17.0-2+b1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:arm64 (1.1.0-2+b5) ... Setting up libedit2:arm64 (3.1-20240808-1) ... Setting up libboost-system1.83.0:arm64 (1.83.0-3.2) ... Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up libxcb-keysyms1:arm64 (0.4.0-1+b3) ... Setting up libxcb-shape0:arm64 (1.17.0-2+b1) ... Setting up x11-common (1:7.7+23.1) ... Running in chroot, ignoring request. Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-10) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:arm64 (1.64.0-1) ... Setting up libibumad3:arm64 (52.0-2+b1) ... Setting up libdeflate0:arm64 (1.22-1) ... Setting up libwebpdecoder3:arm64 (1.4.0-0.1+b1) ... Setting up libboost-thread1.83.0:arm64 (1.83.0-3.2) ... Setting up libfftw3-long3:arm64 (3.3.10-1+b3) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libqhull-r8.0:arm64 (2020.2-6+b2) ... Setting up libxcb-render-util0:arm64 (0.3.9-1+b2) ... Setting up xkb-data (2.42-1) ... Setting up libxcb-shm0:arm64 (1.17.0-2+b1) ... Setting up libibmad5:arm64 (52.0-2+b1) ... Setting up libxcb-icccm4:arm64 (0.4.2-1) ... Setting up libcom-err2:arm64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libccp4-data (8.0.0-4) ... Setting up libjbig0:arm64 (2.1-6.1+b2) ... Setting up libpcre2-16-0:arm64 (10.42-4+b2) ... Setting up libaec0:arm64 (1.1.3-1+b1) ... Setting up libopengl0:arm64 (1.7.0-1+b2) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libxcb-util1:arm64 (0.4.0-1+b2) ... Setting up libpsl-dev:arm64 (0.21.2-1.1+b1) ... Setting up libxcb-xkb1:arm64 (1.17.0-2+b1) ... Setting up libxcb-image0:arm64 (0.4.0-2+b2) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Dec 10 01:55:27 UTC 2025. Universal Time is now: Wed Dec 10 01:55:27 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:arm64 (1.83.0-3.2) ... Setting up libxcb-present0:arm64 (1.17.0-2+b1) ... Setting up unicode-data (15.1.0-1) ... Setting up libboost-serialization1.83.0:arm64 (1.83.0-3.2) ... Setting up xtrans-dev (1.4.0-1) ... Setting up libboost-numpy1.83.0 (1.83.0-3.2) ... Setting up libfontenc1:arm64 (1:1.1.8-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:arm64 (4.8.12-3.1+b3) ... Setting up libpcre2-32-0:arm64 (10.42-4+b2) ... Setting up libglib2.0-0t64:arm64 (2.82.2-2) ... Setting up libblas3:arm64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb-xinerama0:arm64 (1.17.0-2+b1) ... Setting up libunbound8:arm64 (1.22.0-1) ... Setting up libpkgconf3:arm64 (1.8.1-4) ... Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-2+b2) ... Setting up libmunge2:arm64 (0.5.15-4+b1) ... Setting up libexpat1-dev:arm64 (2.6.3-2) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-3+b1) ... Setting up libgnutls-dane0t64:arm64 (3.8.6-2+b1) ... Setting up libann-cctbx0 (1.1.2+doc-9+b2) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.1.5-3+b1) ... Setting up libepoxy0:arm64 (1.5.10-2) ... Setting up libboost-chrono1.83.0t64:arm64 (1.83.0-3.2) ... Setting up libxcb-sync1:arm64 (1.17.0-2+b1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libavahi-common-data:arm64 (0.8-13+b3) ... Setting up libdbus-1-3:arm64 (1.14.10-6) ... Setting up liblzf1:arm64 (3.6-4+b2) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:arm64 (1.0.15-1) ... Setting up libimagequant0:arm64 (2.18.0-1+b2) ... Setting up libproc2-0:arm64 (2:4.0.4-6) ... Setting up pymol-data (3.0.0+dfsg-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:arm64 (3.3.2-2) ... Setting up libpng16-16t64:arm64 (1.6.44-2) ... Setting up libhwloc15:arm64 (2.11.2-1) ... Setting up libmmdb2-dev (2.0.22-1+b2) ... Setting up libtcl8.6:arm64 (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up libboost-numpy1.83-dev (1.83.0-3.2) ... Setting up liblz4-dev:arm64 (1.9.4-3+b1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:arm64 (1:3.6.0-10+b1) ... Setting up liblerc-dev:arm64 (4.0.0+ds-4+b2) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libidn2-dev:arm64 (2.3.7-2+b1) ... Setting up libfftw3-double3:arm64 (3.3.10-1+b3) ... Setting up libglapi-mesa:arm64 (24.2.4-1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:arm64 (14.2.0-6) ... Setting up libvulkan1:arm64 (1.3.296.0-1) ... Setting up libboost-atomic1.83-dev:arm64 (1.83.0-3.2) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:arm64 (1.4.0-1+b1) ... Setting up libwebp7:arm64 (1.4.0-0.1+b1) ... Setting up liblzma-dev:arm64 (5.6.3-1+b1) ... Setting up libxcb-dri2-0:arm64 (1.17.0-2+b1) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libnuma1:arm64 (2.0.18-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up libmtdev1t64:arm64 (1.1.6-1.2+b1) ... Setting up sensible-utils (0.0.24) ... Setting up ocl-icd-libopencl1:arm64 (2.3.2-1+b2) ... Setting up libxshmfence1:arm64 (1.3-1+b2) ... Setting up at-spi2-common (2.54.0-1) ... Setting up libccp4c0t64:arm64 (8.0.0-4) ... Setting up libtiff6:arm64 (4.5.1+git230720-5) ... Setting up libxcb-randr0:arm64 (1.17.0-2+b1) ... Setting up dbus-session-bus-common (1.14.10-6) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libnl-3-200:arm64 (3.7.0-0.3+b1) ... Setting up libmd4c0:arm64 (0.5.2-2+b1) ... Setting up libopenjp2-7:arm64 (2.5.0-2+b4) ... Setting up libx11-6:arm64 (2:1.8.7-1+b1) ... Setting up libthai-data (0.1.29-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:arm64 (1.6.0-1) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libboost-dev:arm64 (1.83.0.2+b2) ... Setting up libevent-core-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up libglu1-mesa:arm64 (9.0.2-1.1+b2) ... Setting up libwayland-egl1:arm64 (1.23.0-1+b1) ... Setting up libboost-system1.83-dev:arm64 (1.83.0-3.2) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libopengl-dev:arm64 (1.7.0-1+b2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up dbus-system-bus-common (1.14.10-6) ... useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Setting up libsharpyuv-dev:arm64 (1.4.0-0.1+b1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:arm64 (1.4.0-0.1+b1) ... Setting up libtiffxx6:arm64 (4.5.1+git230720-5) ... Setting up libdeflate-dev:arm64 (1.22-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxcomposite1:arm64 (1:0.4.6-1) ... Setting up libevdev2:arm64 (1.13.3+dfsg-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ... Setting up dbus-bin (1.14.10-6) ... Setting up libonig5:arm64 (6.9.9-1+b1) ... Setting up libbrotli-dev:arm64 (1.1.0-2+b5) ... Setting up libgudev-1.0-0:arm64 (238-5+b1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.6.0-1) ... Setting up libp11-kit-dev:arm64 (0.25.5-2+b1) ... Setting up libsz2:arm64 (1.1.3-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libpopt0:arm64 (1.19+dfsg-2) ... Setting up libann-cctbx-dev (1.1.2+doc-9+b2) ... Setting up libwacom-common (2.13.0-1) ... Setting up libxkbcommon0:arm64 (1.6.0-1+b2) ... Setting up libwayland-client0:arm64 (1.23.0-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:arm64 (1.17.0-2+b1) ... Setting up libllvm19:arm64 (1:19.1.2-2) ... Setting up libx11-xcb1:arm64 (2:1.8.7-1+b1) ... Setting up libice6:arm64 (2:1.1.1-1) ... Setting up liblapack3:arm64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxdamage1:arm64 (1:1.1.6-1+b2) ... Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-2+b2) ... Setting up libssm2:arm64 (1.4.0-2+b3) ... Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... Setting up libxau-dev:arm64 (1:1.0.11-1) ... Setting up libboost-chrono1.83-dev:arm64 (1.83.0-3.2) ... Setting up nettle-dev:arm64 (3.10-1+b1) ... Setting up libxrender1:arm64 (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-7) ... Setting up libfftw3-bin (3.3.10-1+b3) ... Setting up libwacom9:arm64 (2.13.0-1) ... Setting up libjq1:arm64 (1.7.1-3+b1) ... Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10+b1) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:arm64 (1.4.0-0.1+b1) ... Setting up libaec-dev:arm64 (1.1.3-1+b1) ... Setting up libavahi-common3:arm64 (0.8-13+b3) ... Setting up libboost-serialization1.83-dev:arm64 (1.83.0-3.2) ... Setting up libjpeg-dev:arm64 (1:2.1.5-3+b1) ... Setting up libjbig-dev:arm64 (2.1-6.1+b2) ... Setting up libcloudproviders0:arm64 (0.3.6-1+b1) ... Setting up libxext6:arm64 (2:1.3.4-1+b2) ... Setting up dbus-daemon (1.14.10-6) ... Setting up libccp4f0t64:arm64 (8.0.0-4) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up libcolord2:arm64 (1.4.7-1+b2) ... Setting up pkgconf:arm64 (1.8.1-4) ... Setting up libxxf86vm1:arm64 (1:1.1.4-1+b3) ... Setting up libinput-bin (1.26.2-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:arm64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:arm64 (535.171.04-1+b1) ... Setting up libdconf1:arm64 (0.40.0-4+b3) ... Setting up dh-autoreconf (20) ... Setting up libthai0:arm64 (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:arm64 (1:1.1.2-3+b2) ... Setting up libwebp-dev:arm64 (1.4.0-0.1+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:arm64 (1.83.0-3.2) ... Setting up libllvm17t64:arm64 (1:17.0.6-18) ... Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ... Setting up libtiff-dev:arm64 (4.5.1+git230720-5) ... Setting up libxfixes3:arm64 (1:6.0.0-2+b2) ... Setting up libboost-date-time1.83-dev:arm64 (1.83.0-3.2) ... Setting up dbus (1.14.10-6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:arm64 (2:1.1.4-3+b2) ... Setting up libboost-numpy-dev (1.83.0.2+b2) ... Setting up libxkbcommon-x11-0:arm64 (1.6.0-1+b2) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libxrandr2:arm64 (2:1.5.4-1+b1) ... Setting up libssh2-1-dev:arm64 (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:arm64 (8.2-5) ... Setting up libssm-dev:arm64 (1.4.0-2+b3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:arm64 (2.4.123-1) ... Setting up groff-base (1.23.0-5) ... Setting up libwayland-cursor0:arm64 (1.23.0-1+b1) ... Setting up xml-core (0.19) ... Setting up jq (1.7.1-3+b1) ... Setting up libxslt1.1:arm64 (1.1.35-1.1+b1) ... Setting up libpam-systemd:arm64 (256.7-3) ... Setting up libharfbuzz0b:arm64 (10.0.1-1) ... Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1+b1) ... Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:arm64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:arm64 (2.15.0-1.1+b1) ... Setting up libsm6:arm64 (2:1.2.4-1) ... Setting up libfftw3-dev:arm64 (3.3.10-1+b3) ... Setting up libavahi-client3:arm64 (0.8-13+b3) ... Setting up libboost-timer-dev:arm64 (1.83.0.2+b2) ... Setting up rsync (3.3.0-1+b1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... Setting up libboost-thread1.83-dev:arm64 (1.83.0-3.2) ... Setting up libgnutls28-dev:arm64 (3.8.6-2+b1) ... Setting up libinput10:arm64 (1.26.2-1) ... Setting up gtk-update-icon-cache (4.16.3+ds-2) ... Setting up libnghttp2-dev:arm64 (1.64.0-1) ... Setting up libibverbs1:arm64 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:arm64 (2.3.6-1+b2) ... Setting up libxcb1-dev:arm64 (1.17.0-2+b1) ... Setting up libxi6:arm64 (2:1.8.2-1) ... Setting up libcurl4t64:arm64 (8.10.1-2) ... Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Setting up libccp4-dev:arm64 (8.0.0-4) ... Setting up ibverbs-providers:arm64 (52.0-2+b1) ... Setting up libdrm-radeon1:arm64 (2.4.123-1) ... Setting up libxtst6:arm64 (2:1.2.3-1.1+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:arm64 (8.6.15-1) ... Setting up libxcursor1:arm64 (1:1.2.2-1+b1) ... Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ... Setting up python3.12-tk (3.12.6-1) ... Setting up libx11-dev:arm64 (2:1.8.7-1+b1) ... Setting up libcurl3t64-gnutls:arm64 (8.10.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up libhwloc-plugins:arm64 (2.11.2-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libcairo2:arm64 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up dbus-user-session (1.14.10-6) ... Setting up libqt5core5t64:arm64 (5.15.15+dfsg-2) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libnotify4:arm64 (0.8.3-1+b2) ... Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... Setting up libraqm0:arm64 (0.10.1-1+b2) ... Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libpmix2t64:arm64 (5.0.3-2+b1) ... Setting up libnsl2:arm64 (1.3.0-3+b3) ... Setting up libqt5sql5t64:arm64 (5.15.15+dfsg-2) ... Setting up librdmacm1t64:arm64 (52.0-2+b1) ... Setting up libcairo-gobject2:arm64 (1.18.2-2) ... Setting up libwxbase3.2-1t64:arm64 (3.2.6+dfsg-2) ... Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libcups2t64:arm64 (2.4.10-2) ... Setting up libhsakmt1:arm64 (5.7.0-1) ... Setting up libboost-thread-dev:arm64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... Setting up libfabric1:arm64 (1.17.0-3.1) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4) ... Setting up mesa-libgallium:arm64 (24.2.4-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7+b1) ... Setting up libnetcdf19t64:arm64 (1:4.9.2-7) ... Setting up libqt5dbus5t64:arm64 (5.15.15+dfsg-2) ... Setting up libcbf1t64:arm64 (0.9.7+dfsg1-4) ... Setting up libpython3.12-stdlib:arm64 (3.12.6-1) ... Setting up libgbm1:arm64 (24.2.4-1) ... Setting up blt (2.5.3+dfsg-7+b1) ... Setting up python3.12 (3.12.6-1) ... Setting up libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libgl1-mesa-dri:arm64 (24.2.4-1) ... Setting up libqt5network5t64:arm64 (5.15.15+dfsg-2) ... Setting up libhdf5-fortran-102t64:arm64 (1.10.10+repack-4) ... Setting up libqt5xml5t64:arm64 (5.15.15+dfsg-2) ... Setting up debhelper (13.20) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up dh-exec (0.30+b1) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libqt5test5t64:arm64 (5.15.15+dfsg-2) ... Setting up libpython3.12t64:arm64 (3.12.6-1) ... Setting up libegl-mesa0:arm64 (24.2.4-1) ... Setting up libcurl4-openssl-dev:arm64 (8.10.1-2) ... Setting up libhsa-runtime64-1:arm64 (5.7.1-3) ... Setting up libegl1:arm64 (1.7.0-1+b2) ... Setting up libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-4) ... Setting up libpython3-stdlib:arm64 (3.12.6-1) ... Setting up libglx-mesa0:arm64 (24.2.4-1) ... Setting up libglx0:arm64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:arm64 (0.40.0-4+b3) ... Setting up libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-4) ... Setting up python3 (3.12.6-1) ... Setting up libpython3.12-dev:arm64 (3.12.6-1) ... Setting up python3-zipp (3.20.2-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (5.9.8-2+b1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-natsort (8.0.2-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-pil:arm64 (10.4.0-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.1-1) ... Setting up libgl1:arm64 (1.7.0-1+b2) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-brotli (1.1.0-2+b5) ... Setting up python3-cycler (0.12.1-1) ... Setting up libhdf5-dev (1.10.10+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-pycbf (0.9.7+dfsg1-4) ... Setting up python3-kiwisolver (1.4.7-2) ... Setting up python3-idna (3.8-2) ... Setting up scons (4.8.1+dfsg-1) ... Setting up python3.12-dev (3.12.6-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pip (24.3.1+dfsg-1) ... Setting up libglew2.2:arm64 (2.2.0-4+b2) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-pyqt5.sip (12.15.0-1+b1) ... Setting up python3-lxml:arm64 (5.3.0-1) ... Setting up libglx-dev:arm64 (1.7.0-1+b2) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-flexcache (0.3-2) ... Setting up python3-msgpack (1.0.3-3+b3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up libgl-dev:arm64 (1.7.0-1+b2) ... Setting up python3-procrunner (2.3.3-2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up libucx0:arm64 (1.17.0+ds-3) ... Setting up libpython3-dev:arm64 (3.12.6-1) ... Setting up python3-cairo (1.26.1-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b5) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-tqdm (4.66.5-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-tk:arm64 (3.12.6-1) ... Setting up python3-opengl (3.1.7+dfsg-1) ... /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' '''OpenGL extension AMD.vertex_shader_tessellator Setting up pybind11-dev (2.13.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up libqt5gui5t64:arm64 (5.15.15+dfsg-2) ... Setting up python3-flexparser (0.3.1-2) ... Setting up python3-pil.imagetk:arm64 (10.4.0-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up libpython3-all-dev:arm64 (3.12.6-1) ... Setting up libcbf-dev:arm64 (0.9.7+dfsg1-4) ... Setting up python3-dev (3.12.6-1) ... Setting up libgtk-3-0t64:arm64 (3.24.43-4) ... Setting up libboost-python1.83-dev (1.83.0-3.2) ... Setting up libglu1-mesa-dev:arm64 (9.0.2-1.1+b2) ... Setting up libopenmpi3t64:arm64 (4.1.6-13.3) ... Setting up libwxgtk3.2-1t64:arm64 (3.2.6+dfsg-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-all-dev (3.12.6-1) ... Setting up libwxgtk-gl3.2-1t64:arm64 (3.2.6+dfsg-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up libqt5widgets5t64:arm64 (5.15.15+dfsg-2) ... Setting up python3-wxgtk4.0 (4.2.2+dfsg-1) ... Setting up sfftw2 (2.1.5-7) ... Setting up libqt5help5:arm64 (5.15.15-2) ... Setting up libboost-python-dev (1.83.0.2+b2) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pint (0.24.3-2) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up fftw2 (2.1.5-7) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up sfftw-dev (2.1.5-7) ... Setting up libclipper2:arm64 (2.1.20201109-2+b3) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-reportlab (4.2.5-1) ... Setting up python3-contourpy (1.3.0-2) ... Setting up libqt5opengl5t64:arm64 (5.15.15+dfsg-2) ... Setting up fftw-dev (2.1.5-7) ... Setting up libqt5printsupport5t64:arm64 (5.15.15+dfsg-2) ... Setting up python3-mrcfile (1.5.3-3) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up libqt5designer5:arm64 (5.15.15-2) ... Setting up python3-h5py-serial (3.11.0-5) ... Setting up libclipper-dev:arm64 (2.1.20201109-2+b3) ... Setting up python3-h5py (3.11.0-5) ... Setting up python3-hdf5plugin (4.0.1-3) ... Setting up python3-nxmx (0.0.3-3) ... Setting up python3-pyqt5 (5.15.11+dfsg-1+b2) ... Setting up python3-pyqt5.qtopengl (5.15.11+dfsg-1+b2) ... Setting up python3-pymol (3.0.0+dfsg-1+b1) ... Setting up python3-fonttools (4.54.1-4) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (256.7-3) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.84+dfsg-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cctbx_2024.8+ds2+~3.21.1+ds1-3_source.changes dpkg-buildpackage: info: source package cctbx dpkg-buildpackage: info: source version 2024.8+ds2+~3.21.1+ds1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Roland Mas dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources dh_auto_clean pybuild --clean -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; find . -name __pycache__ -type d -exec rm -rf {} \; rm -f setup.py rm -rf annlib annlib_adaptbx rm -rf ccp4io ccp4io_adaptbx rm -rf gui_resources make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars debian/files rm -fr -- debian/libcctbx0/ debian/tmp/ debian/libcctbx-dev/ debian/python3-cctbx/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources # configure the cctbx python modules dh_auto_configure pybuild --configure -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py config running config # configure dxtbx python modules dh_auto_configure --sourcedirectory=dxtbx pybuild --configure -i python{version} -p 3.12 --dir dxtbx I: pybuild base:311: python3.12 setup.py config Found 21 dxtbx dispatchers Found 139 Format classes running config # configure the cctbx libtbx build system dh_auto_configure -- -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ \ && {interpreter} /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" pybuild --configure -i python{version} -p 3.12 -s custom "--configure-args=mkdir -p {build_dir}_ && cd {build_dir}_ && {interpreter} /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" I: pybuild base:311: mkdir -p '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ && cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ && python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io Python: 3.12.6 "/usr/bin/python3.12" Compiler: default Build mode: debug Warning level: 0 Precompiled Headers: False Static libraries: False Static exe: False Scan Boost headers: False Write full flex_fwd.h files: False Build Boost.Python extensions: True Define BOOST_PYTHON_NO_PY_SIGNATURES: False Define BOOST_PYTHON_BOOL_INT_STRICT: True Enable OpenMP if possible: False Boost threads enabled: True Enable CUDA: False Enable KOKKOS: False Use conda: False Use opt_resources if available: False Use environment flags: True Enable C++11: False CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 command_version_suffix: None Relocatable paths anchored at: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_ Top-down list of all modules involved: wxtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/wxtbx" serialtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/serialtbx" rstbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx" spotfinder "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder" mmtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx" gltbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx" dxtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx" iotbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx" smtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx" ucif "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ucif" crys3d "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/crys3d" cctbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx" chiltbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/chiltbx" ccp4io+adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io" "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx" cbflib_adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx" annlib+adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib" "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx" scitbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx" fable "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable" cma_es "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cma_es" omptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/omptbx" boost+adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost" "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx" tbxx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/tbxx" libtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx" Creating files in build directory: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_" dispatcher_include_template.sh dispatcher_head.sh setpaths.sh setpaths.csh setpaths_all.sh setpaths_all.csh setpaths_debug.sh unsetpaths.sh setpaths_debug.csh unsetpaths.csh SConstruct Makefile run_tests.csh Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/crys3d/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/wxtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/libtbx_refresh.py" Generating C++ header files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/boost_python" Using fable to convert scitbx/lbfgs.f Updating entry points for scitbx 1 entries for entry point pytest_randomly.random_seeder Obtaining file:///build/reproducible-path/cctbx-2024.8%2Bds2%2B~3.21.1%2Bds1/dxtbx Checking if build backend supports build_editable: started Checking if build backend supports build_editable: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Installing collected packages: dxtbx DEPRECATION: Legacy editable install of dxtbx==3.21.1 from file:///build/reproducible-path/cctbx-2024.8%2Bds2%2B~3.21.1%2Bds1/dxtbx (setup.py develop) is deprecated. pip 25.0 will enforce this behaviour change. A possible replacement is to add a pyproject.toml or enable --use-pep517, and use setuptools >= 64. If the resulting installation is not behaving as expected, try using --config-settings editable_mode=compat. Please consult the setuptools documentation for more information. Discussion can be found at https://github.com/pypa/pip/issues/11457 Running setup.py develop for dxtbx Successfully installed dxtbx Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/cctbx/eltbx" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/cctbx/boost_python" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/crys3d/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/smtbx/boost_python" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/libtbx_refresh.py" Using fable to convert iotbx/pdb/hybrid_36_f.f Writing: iotbx/pdb/hybrid_36_fem.cpp Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/gltbx" fonts: 8x13 9x15 10x20 /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/libtbx_refresh.py" Done. make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' # build the python modules dh_auto_build pybuild --build -i python{version} -p 3.12 I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/development.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/conftest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx copying simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx copying simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx copying serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx copying rstbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx copying rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx copying rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx copying qttbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx copying qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx copying omptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx copying omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/configure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/subversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/progress.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/log.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/fastentrypoints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/glu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/gl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg copying fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tokenization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui copying xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui copying xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal copying xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal copying xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx copying xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo copying xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale copying xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report copying xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model copying xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms copying xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables copying xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs copying xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation copying xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation copying xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference copying xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference copying xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference copying xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil copying xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil copying xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output copying xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output copying xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics copying xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine copying xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line copying xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line copying xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support copying spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support copying spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family copying spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family copying spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors copying smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl copying smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl copying smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators copying smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators copying smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks copying smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family copying smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure copying smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio copying smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio copying smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct copying smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data copying smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_same_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_disorder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_direction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel copying simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos copying simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos copying simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner copying scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner copying scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree copying scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree copying scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib copying scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse copying scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body copying scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body copying scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random copying scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/random_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix copying scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix copying scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface copying scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface copying scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils copying scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils copying scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx copying scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python copying scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python copying scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington copying scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington copying scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots copying rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots copying rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core copying rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core copying rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors copying rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors copying rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass copying rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass copying rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family copying rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family copying rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers copying qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers copying qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster copying prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster copying prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa copying mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr copying mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr copying mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space copying mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space copying mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias copying mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias copying mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification copying mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification copying mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment copying mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/pytest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs copying iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile copying iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6 copying iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6 copying iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6 creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util copying iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util copying iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line copying gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line copying gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering copying cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering copying cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math copying cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft copying cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft copying cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs copying crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs copying crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line copying cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line copying cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators copying cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators copying cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron copying cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging copying cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging copying cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks copying cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol copying cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol copying cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry copying cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance copying cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family copying cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family copying cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations copying cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations copying cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell copying cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering copying cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost # build the dxtbx python module dh_auto_build --sourcedirectory=dxtbx pybuild --build -i python{version} -p 3.12 --dir dxtbx I: pybuild base:311: /usr/bin/python3 setup.py build Found 21 dxtbx dispatchers Found 139 Format classes running build running build_py creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus copying src/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data copying src/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python copying src/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python copying src/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data # build the cctbx extensions and libraries dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 12 " pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cd {build_dir}_ && ./bin/libtbx.scons -j 12 " I: pybuild base:311: cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ && ./bin/libtbx.scons -j 12 scons: Reading SConscript files ... /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/SConscript:1414: SyntaxWarning: invalid escape sequence '\.' cuda_version = re.findall('release [0-9]+\.*[0-9]+', line) libtbx.scons: using flags from initial environment: CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 libtbx.scons: OpenMP is disabled. BOOST_PYTHON_LIB_VERSION: boost_python312 BOOST_NUMPY_LIB_VERSION: boost_numpy312 BOOST_VERSION: 108300 Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cbflib.tst_memory' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.getting_started' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.sym_equiv_sites' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.convert_ccp4_symop_lib' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.lattice_symmetry' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.find_distances' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.sys_abs_equiv_space_groups' scons: done reading SConscript files. scons: Building targets ... g++ -o annlib_adaptbx/ann/ann_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -Iannlib_adaptbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/src -Iannlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/ann_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o annlib_adaptbx/ann/boost_python/annlib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/usr/include/python3.12 -Iannlib_adaptbx/ann/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/boost_python/src -Iannlib_adaptbx/ann/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/boost_python/annlib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/blobs_cmd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/blobs_cmd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/asymmetric_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/asymmetric_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/skeletons.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/skeletons.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/dijkstra.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/dijkstra.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/map_reader.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/xplor/map_reader.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/map_writer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/xplor/map_writer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/cut.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/cut.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/reference_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/reference_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.cpp g++ -o cctbx/eltbx/basic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/basic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/it1992.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/it1992.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/wk1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/wk1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/n_gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/fp_fdp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/fp_fdp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o cctbx/eltbx/henke_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_01_12.cpp g++ -o cctbx/eltbx/henke_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_13_24.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1' g++ -o cctbx/eltbx/henke_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_61_72.cpp g++ -o cctbx/eltbx/henke_tables_73_84.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_73_84.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_85_92.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_85_92.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/icsd_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/icsd_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/covalent_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/covalent_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/neutron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/neutron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_13_24.cpp g++ -o cctbx/eltbx/sasaki_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_61_72.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_73_82.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_73_82.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/tiny_pse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/tiny_pse.cpp g++ -o cctbx/eltbx/wavelengths.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/wavelengths.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/electron_scattering/peng1996.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/electron_scattering/peng1996.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/attenuation_coefficient.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/attenuation_coefficient.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/bricks.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/bricks.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/change_of_basis_op.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/group_codes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/group_codes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/hall_in.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/hall_in.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_tr.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/lattice_tr.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/miller.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/miller.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_ref_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reciprocal_space_ref_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/row_echelon_solve.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/row_echelon_solve.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/hall_symbol_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/hall_symbol_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/matrix_group_code_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/matrix_group_code_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/normalizer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/normalizer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/uctbx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/uctbx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/spoil_optimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/spoil_optimization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/crystal_orientation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/crystal_orientation.cpp g++ -o omptbx/stubs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/omptbx/stubs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/breadth_first_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/clustering_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o boost_adaptbx/graph/connected_component_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1' g++ -o boost_adaptbx/graph/graph_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/graph_structure_comparison_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/maximum_clique_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/metric_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/metric_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/min_cut_max_flow_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/utility_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/utility_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/hybrid_times_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/hybrid_times_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libcctbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcctbx.so.0 cctbx/eltbx/basic.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/covalent_radii.o cctbx/eltbx/neutron.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/wavelengths.o cctbx/eltbx/electron_scattering/peng1996.o cctbx/eltbx/attenuation_coefficient.o cctbx/miller/asu.o cctbx/miller/bins.o cctbx/miller/index_generator.o cctbx/miller/index_span.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/match_indices.o cctbx/miller/match_multi_indices.o cctbx/miller/sym_equiv.o cctbx/sgtbx/bricks.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/miller.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/space_group.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/symbols.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/utils.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o cctbx/uctbx/crystal_orientation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm Create symlinks for: 'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so.0'->'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so'->'lib/libcctbx.so.0.0.1' g++ -o boost_adaptbx/meta_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/meta_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/optional_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/optional_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/metric_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/utility_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/rational_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/rational_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/std_pair_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/std_pair_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/boost_thread_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tests/boost_thread_test.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/python_streambuf_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tests/python_streambuf_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tests/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tuple_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tuple_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/buffer_based_service.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/buffer_based_service.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/cbf_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/mar_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/mar_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DCBF_NO_REGEX -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/tst_memory.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ccp4io_adaptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx/ext.cpp gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx/fortran_call_stubs.c gcc -o ccp4io_adaptbx/printf_wrappers.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx/printf_wrappers.c cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/adp_restraints_bpl.cpp g++ -o cctbx/adp_restraints/adp_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/adp_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/adp_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/aniso_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/aniso_restraints_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/fixed_u_eq_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/isotropic_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/isotropic_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigid_bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/rigid_bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/rigu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/adptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adptbx/boost_python/adptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/anharmonic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adptbx/boost_python/anharmonic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/hirshfeld.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adptbx/boost_python/hirshfeld.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_hendrickson_lattman.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_hendrickson_lattman.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_miller_index.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_miller_index.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_xray_scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_xray_scatterer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libcctbx_sgtbx_asu.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libcctbx_sgtbx_asu.so.0 cctbx/sgtbx/direct_space_asu/proto/cut.o cctbx/sgtbx/direct_space_asu/proto/reference_table.o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lm g++ -o cctbx/boost_python/emma_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/emma_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1' g++ -o lib/libasymmetric_map.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libasymmetric_map.so.0 cctbx/maptbx/asymmetric_map.o cctbx/maptbx/skeletons.o cctbx/maptbx/dijkstra.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm Create symlinks for: 'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so.0'->'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so'->'lib/libasymmetric_map.so.0.0.1' g++ -o bin/cctbx_blobs -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm g++ -o cctbx/boost_python/french_wilson_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/french_wilson_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/orientation_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/orientation_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/statistics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/statistics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/covariance/boost_python/covariance_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/covariance/boost_python/covariance_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/asu_clusters_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/asu_clusters_bpl.cpp g++ -o cctbx/crystal/close_packing_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/close_packing_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/coordination_sequences_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/coordination_sequences_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/crystal_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/crystal_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/direct_space_asu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/incremental_pairs_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/incremental_pairs_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/neighbors_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/neighbors_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/pair_tables_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/site_cluster_analysis_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/site_cluster_analysis_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/symmetry_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/symmetry_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/dmtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/dmtbx/boost_python/dmtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/dmtbx/boost_python/triplet_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_phase_relation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/dmtbx/boost_python/triplet_phase_relation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/attenuation_coefficient_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/chemical_elements_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/chemical_elements_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/covalent_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/covalent_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/fp_fdp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/fp_fdp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/henke_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/henke_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/icsd_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/icsd_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/neutron_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/neutron_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/sasaki_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/sasaki_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/tiny_pse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/tiny_pse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/wavelengths_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/wavelengths_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/xray_scattering_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/xray_scattering_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/convert_ccp4_symop_lib.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/convert_ccp4_symop_lib.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/find_distances.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/find_distances.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/getting_started.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/getting_started.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sys_abs_equiv_space_groups.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/sys_abs_equiv_space_groups.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry/boost_python/geometry_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry/boost_python/geometry_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/angle_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/chirality_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::angle_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp:75:65: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_angle_proxy") | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:12: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for(int i=0;i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | for(int i=0;i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/geometry_restraints/geometry_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/geometry_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_similarity_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:55:44: required from here 54 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | bond_similarity_proxy, rir>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 56 | "shared_bond_similarity_proxy"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:79:54: required from here 78 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | af::tiny, 2>, rbv>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 80 | "sites_array"); | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/motif_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/motif_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_misc.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::chirality_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:75:60: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_chirality_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::map; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:129:23: required from here 129 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 130 | "bond_params_table") | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:232:25: required from here 232 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 233 | "shared_bond_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:340:25: required from here 340 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 341 | "shared_bond_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables.h:643:46: required from ‘bool cctbx::crystal::pair_asu_table::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’ 643 | int j_sym = asu_mappings_->find_i_sym(j_seq, rt_mx_j); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables.h:543:35: required from ‘cctbx::crystal::pair_asu_table& cctbx::crystal::pair_asu_table::add_pair(const scitbx::af::tiny&) [with FloatType = double; IntShiftType = int]’ 543 | bool is_new = process_pair(i_seqs[0], i_seqs[1], rt_mx_ji); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted.h:16:30: required from here 16 | pair_asu_table.add_pair(bond_simple_proxies[i].i_seqs); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 859 | for(int i_sym=0; i_sym, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 869 | for(int i_sym=0; i_sym::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = dihedral_proxy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17: required from here 110 | shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o cctbx/geometry_restraints/nonbonded_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65: required from here 84 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 85 | "shared_dihedral_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/parallelity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/tuple.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/shared_wrapper_pickle.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp:2: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60: required from here 82 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 83 | "shared_parallelity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:92:25: required from here 92 | shared_w_t::wrap("shared_nonbonded_simple_proxy") | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:125:25: required from here 125 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 126 | "shared_nonbonded_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/planarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/planarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/neighbors_fast.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = cctbx::cartesian; CubicleContentType = std::vector; FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/neighbors_fast.h:77:34: required from ‘cctbx::crystal::neighbors::fast_pair_generator::fast_pair_generator(const boost::shared_ptr >&, const FloatType&, bool, const FloatType&, const FloatType&) [with FloatType = double; IntShiftType = int]’ 77 | cubicles_.i_cubicle(mappings[mi.i_seq][mi.i_sym].mapped_site())); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:80:27: required from here 80 | min_cubicle_edge); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::planarity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:62:23: required from here 62 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 63 | "shared_planarity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/maptbx/asymmetric_map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/asymmetric_map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/bcr/bcr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/bcr/bcr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/coordinate_transformers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/grid_tags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/gridding.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/maptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/misc.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/peak_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/pymol_interface.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/structure_factors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/masks/boost_python/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/math/time_trigonometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/merging/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/merging/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_timer -lm g++ -o cctbx/miller/boost_python/amplitude_normalisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/amplitude_normalisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/change_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/change_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/expand_to_p1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/expand_to_p1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/f_calc_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/f_calc_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/lookup_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/lookup_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/match_bijvoet_mates.cpp g++ -o cctbx/miller/boost_python/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/merge_equivalents.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/merge_equivalents.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/miller_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/miller_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_integrator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/phase_integrator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_transfer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/phase_transfer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/randomize_amplitude_and_phase.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/randomize_amplitude_and_phase.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/slices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/slices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/multipolar/aspherical_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/multipolar/aspherical_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/brick.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/brick.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/change_of_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/change_of_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/phase_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/phase_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/search_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/search_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sgtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/sgtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/tensors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/asu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/symmetry_search/boost_python/symmetry_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/symmetry_search/boost_python/symmetry_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/fast_nv1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/fast_nv1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lm g++ -o cctbx/translation_search/boost_python/fast_terms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/fast_terms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/symmetry_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/symmetry_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/translation_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/translation_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/fast_minimum_reduction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/boost_python/fast_minimum_reduction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/uctbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/boost_python/uctbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/determine_unit_cell/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_SINGLEFILE_NCDIST -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/determine_unit_cell/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/conversions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/conversions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/curvatures_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/curvatures_simple.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/each_hkl_gradients_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/extinction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/extinction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/f_model_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/fast_gradients.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/fast_gradients.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/gradient_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/gradient_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/curvatures_simple.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/curvatures_simple.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/gradients_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/each_hkl_gradients_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/grouped_data.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/fast_gradients.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/fast_gradients.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h:4: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/minimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/minimization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/parameter_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data cctbx::xray::f_model_core_data::f_model_core_data::select(const scitbx::af::const_ref&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:174:32: required from here 174 | .def("select", &w_t::select) | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 732 | CCTBX_ASSERT( iselection[ii]::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/sampled_model_density.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampled_model_density.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/gradients_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/gradients_direct.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:4: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scatterer_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/minimization.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/minimization.cpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::bic() [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for (long int ii=0;ii::r_abs() [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:69:31: required from here 69 | .def("r_abs", &w_t::r_abs) | ^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 271 | for (long int ii=0;ii cctbx::xray::grouped_data::merger::combine_obs(long int) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:258:24: required from ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’ 258 | tmp_result = combine_obs( ii ); | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:213:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 213 | for (int ii=1;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int ii=1;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::unmerged_data::unmerged_data(scitbx::af::const_ref >, scitbx::af::const_ref >, const cctbx::sgtbx::space_group&, const bool&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::unmerged_data; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<4>::apply::execute(PyObject*, t0, t1, t2, t3) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; W = cctbx::xray::grouped_data::unmerged_data; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:27:15: required from here 26 | class_("unmerged_data", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 | scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | bool const& | ~~~~~~~~~~~ 31 | > | ~ 32 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 33 | arg("asu_hkl"), | ~~~~~~~~~~~~~~~ 34 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 35 | arg("anomalous_flag") ))) | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:54:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 54 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for (int ii=0; ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:67:11: note: in expansion of macro ‘CCTBX_ASSERT’ 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::merger::merger(scitbx::af::const_ref >, scitbx::af::const_ref, scitbx::af::const_ref, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::merger; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref&; t2 = const scitbx::af::const_ref&; t3 = const cctbx::sgtbx::space_group&; t4 = const bool&; t5 = const cctbx::uctbx::unit_cell&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; W = cctbx::xray::grouped_data::merger; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:54:15: required from here 53 | class_("merger", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 | bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 | cctbx::uctbx::unit_cell const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 | > | ~ 61 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 62 | arg("i_obs"), | ~~~~~~~~~~~~~ 63 | arg("s_obs"), | ~~~~~~~~~~~~~ 64 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 65 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 66 | arg("unit_cell") | ~~~~~~~~~~~~~~~~ 67 | ))) | ~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:151:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 151 | for (int ii=0;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 167 | for (int ii=0; ii::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampled_model_density.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampled_model_density.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::init_scatterer_part(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/parameter_map.h:54:7: required from ‘cctbx::xray::parameter_map::parameter_map(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’ 54 | init_scatterer_part(scatterers); | ^~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0) [with A0 = boost::python::objects::reference_to_value, scitbx::af::trivial_accessor>&>; Value = cctbx::xray::parameter_map >; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<1>::apply::execute(PyObject*, t0) [with Holder = boost::python::objects::value_holder > >; ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; PyObject = _object; t0 = const scitbx::af::const_ref, scitbx::af::trivial_accessor>&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; Arity = boost::mpl::size, scitbx::af::trivial_accessor>&> >; Holder = boost::python::objects::value_holder > >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = cctbx::xray::parameter_map >; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:46:11: required from ‘static void cctbx::xray::boost_python::parameter_map_wrapper::wrap(const char*) [with XRayScattererType = cctbx::xray::scatterer<>]’ 45 | class_("parameter_map", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 | .def(init const &>(( | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 | arg("scatterers")))) | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:60:50: required from here 60 | parameter_map_wrapper >::wrap("parameter_map"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/parameter_map.h:61:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for(int i_sc=0; i_sc < scatterers.size(); ++i_sc) { | ~~~~~^~~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/scattering_type_registry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampling_base.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:142:44: required from here 140 | class_ wrapper = scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | scatterer_flags, | ~~~~~~~~~~~~~~~~ 142 | return_internal_reference<> >::wrap("shared_scatterer_flags"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp:349:54: required from here 349 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp:353:55: required from here 353 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 49 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 55 | std::auto_ptr self(new w_t); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ g++ -o cctbx/xray/boost_python/structure_factors_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/targets.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/twin_components.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/twin_targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/xray_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/observations/boost_python/observations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sigmaa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sigmaa.cpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/structure_factors_simple.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/targets/shelxl_wght_ls_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp g++ -o chiltbx/handle_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/chiltbx/handle_test.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/structure_factors_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp:91:77: required from here 91 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp:92:78: required from here 92 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o chiltbx/handle_test -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread chiltbx/handle_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cma_es/cma/cmaes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cma_es/cma/cmaes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cma_es/cma_es_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cma_es/cma_es_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:4: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::shared cctbx::xray::twin_targets::twin_completion::get_free_model_selection(scitbx::af::const_ref >, const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:42:50: required from here 42 | .def("get_free_model_selection", &w_t::get_free_model_selection) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:128:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 128 | CCTBX_ASSERT( index < flags.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:128:11: note: in expansion of macro ‘CCTBX_ASSERT’ 128 | CCTBX_ASSERT( index < flags.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:182:39: required from here 182 | .def("r_intensity_abs", &w_t::r_intensity_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:559:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:559:6: note: in expansion of macro ‘CCTBX_ASSERT’ 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:560:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:560:6: note: in expansion of macro ‘CCTBX_ASSERT’ 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:561:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:561:6: note: in expansion of macro ‘CCTBX_ASSERT’ 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:189:38: required from here 189 | .def("r_intensity_sq", &w_t::r_intensity_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:604:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:604:6: note: in expansion of macro ‘CCTBX_ASSERT’ 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:605:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:605:6: note: in expansion of macro ‘CCTBX_ASSERT’ 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:606:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:606:6: note: in expansion of macro ‘CCTBX_ASSERT’ 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:196:39: required from here 196 | .def("r_amplitude_abs", &w_t::r_amplitude_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:649:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:649:6: note: in expansion of macro ‘CCTBX_ASSERT’ 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:650:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:650:6: note: in expansion of macro ‘CCTBX_ASSERT’ 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:651:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:651:6: note: in expansion of macro ‘CCTBX_ASSERT’ 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:203:38: required from here 203 | .def("r_amplitude_sq", &w_t::r_amplitude_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:697:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:697:6: note: in expansion of macro ‘CCTBX_ASSERT’ 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:698:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:698:6: note: in expansion of macro ‘CCTBX_ASSERT’ 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:699:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:699:6: note: in expansion of macro ‘CCTBX_ASSERT’ 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:263:45: required from here 263 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:997:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:997:19: note: in expansion of macro ‘CCTBX_ASSERT’ 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1003:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1003:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1006:41: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1006:13: note: in expansion of macro ‘CCTBX_ASSERT’ 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1010:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1010:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:275:45: required from here 275 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:936:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:936:17: note: in expansion of macro ‘CCTBX_ASSERT’ 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:942:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:942:19: note: in expansion of macro ‘CCTBX_ASSERT’ 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:945:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:945:17: note: in expansion of macro ‘CCTBX_ASSERT’ 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:948:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:948:17: note: in expansion of macro ‘CCTBX_ASSERT’ 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/compression.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘cctbx::xray::twin_targets::hemihedral_r_values::hemihedral_r_values(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value&>; Value = cctbx::xray::twin_targets::hemihedral_r_values; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<5>::apply::execute(PyObject*, t0, t1, t2, t3, t4) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&; t4 = const scitbx::mat3&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; W = cctbx::xray::twin_targets::hemihedral_r_values; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:169:13: required from here 168 | class_("hemihedral_r_values", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 | .def(init< | ~~~~^~~~~~ 170 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 1 obs indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 2 calc indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 | sgtbx::space_group const&, // 3 space group | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | bool const&, // 4 anomalous flag | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | scitbx::mat3 const& // 5 twin law | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 | > | ~ 176 | ((arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~ 177 | arg("hkl_calc"), | ~~~~~~~~~~~~~~~~ 178 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 179 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 180 | arg("twin_law") | ~~~~~~~~~~~~~~~ 181 | ))) | ~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:544:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 544 | for (long ii=0;ii::refine(const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/quadrature.h:523:14: required from ‘scitbx::math::quadrature::gauss_legendre_engine::gauss_legendre_engine(const int&) [with FloatType = double]’ 523 | x = refine( start_guess ); | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1070:68: required from ‘cctbx::xray::twin_targets::single_twin_likelihood::single_twin_likelihood(const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const bool&, const bool&, const FloatType&, const FloatType&, const FloatType&, const int&) [with FloatType = double]’ 1070 | scitbx::math::quadrature::gauss_legendre_engine tmp_gle(n_quad_); | ^~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8, A9, A10, A11, A12, A13) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; A9 = boost::python::objects::reference_to_value; A10 = boost::python::objects::reference_to_value; A11 = boost::python::objects::reference_to_value; A12 = boost::python::objects::reference_to_value; A13 = boost::python::objects::reference_to_value; Value = cctbx::xray::twin_targets::single_twin_likelihood; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<14>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8, t9, t10, t11, t12, t13) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector14; PyObject = _object; t0 = const double&; t1 = const double&; t2 = const double&; t3 = const double&; t4 = const double&; t5 = const double&; t6 = const double&; t7 = const double&; t8 = const bool&; t9 = const bool&; t10 = const double&; t11 = const double&; t12 = const double&; t13 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector14; NArgs = boost::mpl::size >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init; W = cctbx::xray::twin_targets::single_twin_likelihood; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:343:14: required from here 342 | class_("single_twin_likelihood", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 | .def(init< | ~~~~^~~~~~ 344 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 | bool const&, bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | double const&, int const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 | > | ~ 352 | ((arg("i_obs1"), arg("s_obs1"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | arg("i_obs2"), arg("s_obs2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 | arg("f_calc1"), arg("f_calc2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 | arg("eps1"), arg("eps2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 | arg("centric1"),arg("centric2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 | arg("alpha"), arg("beta"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 | arg("twin_fraction"), arg("n_quad") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 | )) | ~~ 360 | ) | ~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/quadrature.h:546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 546 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘unsigned int dxtbx::boost_python::cbf_decompress(const char*, std::size_t, int*, std::size_t)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:123:50: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 123 | while ((j < packed_sz) && ((values - original) < values_sz)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘void dxtbx::boost_python::rod_TY6_decompress(int*, const char*, const char*, int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:203:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 203 | for (size_t iy = 0; iy < slow; iy++) { | ~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:224:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 224 | for (int k = 0; k < nblock; k++) { | ~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:250:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 250 | for (int j = 0; j < nbit; j++) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:257:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 257 | for (int j = 0; j < BLOCKSIZE; j++) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 278 | for (int i = 0; i < nrest; i++) { | ~~^~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/image_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/nexus_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘scitbx::af::flex_int dxtbx::boost_python::uncompress(const boost::python::api::object&, const int&, const int&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 184 | DXTBX_ASSERT(nn == (slow * fast)); | ~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:5: note: in expansion of macro ‘DXTBX_ASSERT’ 184 | DXTBX_ASSERT(nn == (slow * fast)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘void dxtbx::boost_python::radial_average(scitbx::af::versa >&, scitbx::af::versa >&, const scitbx::vec2&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, double, double, const scitbx::vec2&, const scitbx::vec2&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 219 | for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 220 | for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) { g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration 10 | typedef struct cbf_handle_struct; | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = bool; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/detector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = bool]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = int]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = double]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = signed char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = float; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = double; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 140 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 166 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 168 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = long unsigned int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 193 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 217 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 115 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment_list.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:24, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:25: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:27: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::beam_detail::BeamPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:52:21: warning: possibly dangling reference to a temporary [-Wdangling-reference] 52 | const Beam &beam = boost::python::extract(obj)(); | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:52:69: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 52 | const Beam &beam = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 209 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 219 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PolychromaticBeamPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: possibly dangling reference to a temporary [-Wdangling-reference] 302 | const PolychromaticBeam &beam = | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:303:63: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 303 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: unused variable ‘beam’ [-Wunused-variable] 302 | const PolychromaticBeam &beam = | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static void dxtbx::model::boost_python::PolychromaticBeamPickleSuite::setstate(boost::python::api::object, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:308:26: warning: unused variable ‘beam’ [-Wunused-variable] 308 | PolychromaticBeam &beam = boost::python::extract(obj)(); | ^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 119 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 129 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 141 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::CrystalPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:155:22: warning: possibly dangling reference to a temporary [-Wdangling-reference] 155 | const Crystal &crystal = boost::python::extract(obj)(); | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:155:76: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 155 | const Crystal &crystal = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::MosaicCrystalKabsch2010PickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:211:38: warning: possibly dangling reference to a temporary [-Wdangling-reference] 211 | const MosaicCrystalKabsch2010 &crystal = | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:212:69: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 212 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::MosaicCrystalSauter2014PickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:268:38: warning: possibly dangling reference to a temporary [-Wdangling-reference] 268 | const MosaicCrystalSauter2014 &crystal = | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:269:69: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 269 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:24: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::VirtualPanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:27: warning: possibly dangling reference to a temporary [-Wdangling-reference] 33 | const VirtualPanel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:65: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 33 | const VirtualPanel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:20: warning: possibly dangling reference to a temporary [-Wdangling-reference] 74 | const Panel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:51: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 74 | const Panel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’ 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’ 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 100 | for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 124 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 134 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image&, const dxtbx::format::Image&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 158 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 168 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:25: warning: possibly dangling reference to a temporary [-Wdangling-reference] 183 | const Detector &detector = boost::python::extract(obj); | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:80: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::operator result_type()’ 183 | const Detector &detector = boost::python::extract(obj); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 228 | for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/goniometer_shadow_masking.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:30: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/model_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::ImageBuffer dxtbx::ImageSet::get_raw_data(std::size_t)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:648:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 648 | if (data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:19: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::Image dxtbx::ImageSet::get_raw_data_as_double(std::size_t)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1116:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1116 | if (double_raw_data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1203:12: note: by ‘dxtbx::ImageSet dxtbx::ImageGrid::partial_set(std::size_t, std::size_t) const’ 1203 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1139:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1139:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1153:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1153:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1474:12: note: by ‘dxtbx::ImageSet dxtbx::ImageSequence::partial_set(std::size_t, std::size_t) const’ 1474 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1238:23: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1238 | if (data.size() != scan->get_num_images()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1277:26: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1277 | if (indices.size() != scan->get_num_images()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘void dxtbx::ImageSequence::set_scan(const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1399:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1399 | if (scan->get_num_images() != size()) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1415:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1415:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:469:56: required from here 469 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:471:55: required from here 471 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:473:53: required from here 473 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::BeamBase; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:249:56: required from here 249 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 250 | obj, | ~~~~ 251 | boost::python::extract(models[0])(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 | &ImageSetData::set_beam); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Detector; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:253:56: required from here 253 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | obj, | ~~~~ 255 | boost::python::extract(models[1]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | &ImageSetData::set_detector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Goniometer; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:257:58: required from here 257 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 258 | obj, | ~~~~ 259 | boost::python::extract(models[2]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 | &ImageSetData::set_goniometer); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Scan; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:261:52: required from here 261 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | obj, | ~~~~ 263 | boost::python::extract(models[3]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 | &ImageSetData::set_scan); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment_list.h:23, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment_list.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 30 | for (std::size_t i = 0; i < boost::python::len(items); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 174 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 193 | for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) { | ~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 203 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::goniometer_detail::GoniometerPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:50:27: warning: possibly dangling reference to a temporary [-Wdangling-reference] 50 | const Goniometer &goniometer = | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:51:58: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 51 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 79 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::multi_axis_goniometer_detail::MultiAxisGoniometerPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:38:36: warning: possibly dangling reference to a temporary [-Wdangling-reference] 38 | const MultiAxisGoniometer &goniometer = | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:39:67: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 39 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 105 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:21: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::VirtualPanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:27: warning: possibly dangling reference to a temporary [-Wdangling-reference] 33 | const VirtualPanel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:65: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 33 | const VirtualPanel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:20: warning: possibly dangling reference to a temporary [-Wdangling-reference] 74 | const Panel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:51: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 74 | const Panel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/spectrum.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:19: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o lib/libcbf-private.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcbf-private.so.0 cbflib_adaptbx/detectors/mar_adaptor.o cbflib_adaptbx/detectors/cbf_adaptor.o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o cbflib_adaptbx/detectors/buffer_based_service.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lhdf5 -lcbf /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ Create symlinks for: 'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so.0'->'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so'->'lib/libcbf-private.so.0.0.1' g++ -o exe_dev/cctbx.convert_ccp4_symop_lib -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/convert_ccp4_symop_lib.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In static member function ‘static void dxtbx::model::boost_python::ScanPickleSuite::setstate(dxtbx::model::Scan&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:41: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:7: note: in expansion of macro ‘DXTBX_ASSERT’ 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::dict dxtbx::model::boost_python::MaptoPythonDict(dxtbx::model::ExpImgRangeMap)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:187:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | for (int k = 0; k < val.size(); ++k) { | ~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::list dxtbx::model::boost_python::get_valid_image_ranges(dxtbx::model::Scan&, std::string)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:374:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 374 | for (int k = 0; k < ranges.size(); ++k) { | ~~^~~~~~~~~~~~~~~ g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cbflib.tst_memory -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cbflib_adaptbx/detectors/tst_memory.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lcbf -lcbf-private -lm -lhdf5 g++ -o exe_dev/cctbx.getting_started -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/getting_started.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.lattice_symmetry -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/lattice_symmetry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sym_equiv_sites -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sym_equiv_sites.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:24: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T* dxtbx::af::flex_table_suite::make_flex_table(boost::python::list) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1233:42: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:416:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 416 | for (std::size_t i = 0; i < len(columns); ++i) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::setitem_row(T&, typename T::size_type, boost::python::dict) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; typename T::size_type = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1252:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:525:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 525 | for (std::size_t i = 0; i < len(row); ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T dxtbx::af::flex_table_suite::select_cols_tuple(const T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1265:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:747:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 747 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::set_selected_cols_tuple(T&, boost::python::tuple, const T&) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1269:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:838:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 838 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::del_selected_cols_tuple(T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1273:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1270 | .def("del_selected", &del_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1271 | .def("del_selected", &del_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1272 | .def("del_selected", &del_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1273 | .def("del_selected", &del_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:890:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 890 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ g++ -o exe_dev/cctbx.sys_abs_equiv_space_groups -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sys_abs_equiv_space_groups.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o fable/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_10x20.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_8x13.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_9x15.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/fonts_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/fonts_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_00_bpl.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o gltbx/gl_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/spectrum.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/str_ref.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/format.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 24 | TBXX_ASSERT(stop <= len_code); | ~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 71 | if (i < code_stop) { | ~~^~~~~~~~~~~ g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/gl_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_08_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_08_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_09_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_09_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_10_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_10_bpl.cpp g++ -o gltbx/gl_functions_11_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_11_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_12_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_12_bpl.cpp g++ -o gltbx/gl_functions_13_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_13_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_14_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_14_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_15_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_15_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_defines_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/glu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/quadrics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/quadrics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/util_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/util_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/viewer_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/viewer_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/ccp4_map/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/cif/boost_python/cif_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/cif/boost_python/cif_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ In file included from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:11: /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec2&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec2]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ g++ -o iotbx/detectors/bruker.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/bruker.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec3&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec3]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ g++ -o iotbx/detectors/bruker_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/bruker_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 178 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 213 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 215 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 216 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 278 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 280 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 281 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 311 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ g++ -o iotbx/detectors/detectors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/detectors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/image_divider.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/image_divider.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/dsn6/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/dsn6/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/dtrek_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/misc/boost_python/dtrek_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/scalepack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/misc/boost_python/scalepack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/batch_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/crystal_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/dataset.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref&, const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’ 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/dataset_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/object.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/object_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object_bpl.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch_bpl.cpp:78:60: required from here 78 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 79 | "shared_batch"); | ~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/pdb/atom_selection.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/atom_selection.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::column; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column_bpl.cpp:76:60: required from here 76 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 77 | "shared_column"); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/pdb/common_residue_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/common_residue_names_bpl.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/sym_equiv.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/atom_selection.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal_bpl.cpp:42:60: required from here 42 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 43 | "shared_crystal"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/pdb/construct_hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/construct_hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp: In member function ‘void iotbx::mtz::object::replace_miller_indices(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:433:40: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:433:5: note: in expansion of macro ‘IOTBX_ASSERT’ 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:435:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 435 | for(int i_refl=0;i_refl iotbx::mtz::object::extract_integers(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:624:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 624 | for(int i=0;i iotbx::mtz::object::extract_reals(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:684:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 684 | for(int i=0;i::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object_bpl.cpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset_bpl.cpp:43:60: required from here 43 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 44 | "shared_dataset"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/pdb/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atom_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_select.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:242:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 242 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp(const scitbx::af::const_ref&, int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:248:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 248 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:257:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 257 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp_for_occupancy_groups_simple(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:261:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 261 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_select.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hybrid_36_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_write.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hybrid_36_c.c g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hybrid_36_cpp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable iotbx/pdb/hybrid_36_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/input.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp: In function ‘void iotbx::pdb::hierarchy::atoms::bpl_wrap()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:84:17: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 84 | std::auto_ptr, | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from iotbx/pdb/hybrid_36_fem.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input_write.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_ext.cpp:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/overall_counts.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/file_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/function/function_base.hpp:28, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:87:36: required from here 87 | class_ wa = wat::wrap("af_shared_atom"); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom_with_labels; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:91:44: required from here 91 | class_ wawl = wawl_t::wrap("af_shared_atom_with_labels"); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/overall_counts.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/rna_dna_atom_names_bpl.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/write_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/xray_structure_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/xray_structure_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 42 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 43 | "Failure writing to file: \"" + file_name + "\""); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’ g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/shelx/shelx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o iotbx/wildcard_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/wildcard_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/boost_python/xplor_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/xplor/boost_python/xplor_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lann-cctbx Create symlinks for: 'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/xray_structure.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/xray_structure_bpl.cpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so'->'lib/annlib_ext.so.0.0.1' g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so.0'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_utility_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_utility_ext.so.0 boost_adaptbx/graph/utility_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1' g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1' g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1' g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python312 -lm -lhdf5 Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1' Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1' g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lm -lccp4c g++ -o scitbx/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1' Create symlinks for: 'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1' g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/boost_python/slice.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/slice.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1' g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf Create symlinks for: 'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so.0'->'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so'->'lib/cma_es_ext.so.0.0.1' g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1' g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/utils.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/utils.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so.0'->'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so'->'lib/dxtbx_format_nexus_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python312 -lm g++ -o ucif/cifParser.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ucif/cifParser.cpp Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ucif/cifLexer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ucif/cifLexer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1' g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so.0'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' g++ -o lib/iotbx_dsn6_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dsn6_map_ext.so.0 iotbx/dsn6/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/iotbx_dtrek_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dtrek_ext.so.0 iotbx/misc/boost_python/dtrek_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so.0'->'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so'->'lib/iotbx_dsn6_map_ext.so.0.0.1' g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1' g++ -o lib/iotbx_scalepack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_scalepack_ext.so.0 iotbx/misc/boost_python/scalepack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1' g++ -o lib/iotbx_shelx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_shelx_ext.so.0 iotbx/shelx/shelx_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1' g++ -o lib/iotbx_wildcard_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_wildcard_ext.so.0 iotbx/wildcard_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1' g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so.0'->'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so'->'lib/iotbx_shelx_ext.so.0.0.1' Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/distl.cpp g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lantlr3c g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/hough.cpp Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/distl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/spotfilter.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/masks/atom_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 Create symlinks for: 'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so.0'->'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so'->'lib/libscitbx_boost_python.so.0.0.1' g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so.0'->'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so'->'lib/cctbx_orientation_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so.0'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1' g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so.0'->'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so'->'lib/cctbx_adptbx_ext.so.0.0.1' g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1' g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1' g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1' g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so.0'->'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so'->'lib/cctbx_translation_search_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' g++ -o lib/cctbx_dmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_dmtbx_ext.so.0 cctbx/dmtbx/boost_python/dmtbx_ext.o cctbx/dmtbx/boost_python/triplet_phase_relation.o cctbx/dmtbx/boost_python/triplet_generator.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_ext.so.0 cctbx/sgtbx/boost_python/sgtbx_ext.o cctbx/sgtbx/boost_python/brick.o cctbx/sgtbx/boost_python/change_of_basis.o cctbx/sgtbx/boost_python/find_affine.o cctbx/sgtbx/boost_python/lattice_symmetry.o cctbx/sgtbx/boost_python/phase_info.o cctbx/sgtbx/boost_python/reciprocal_space_asu.o cctbx/sgtbx/boost_python/rot_mx.o cctbx/sgtbx/boost_python/rt_mx.o cctbx/sgtbx/boost_python/search_symmetry.o cctbx/sgtbx/boost_python/seminvariant.o cctbx/sgtbx/boost_python/site_symmetry.o cctbx/sgtbx/boost_python/space_group.o cctbx/sgtbx/boost_python/space_group_type.o cctbx/sgtbx/boost_python/sym_equiv_sites.o cctbx/sgtbx/boost_python/symbols.o cctbx/sgtbx/boost_python/tensor_rank_2.o cctbx/sgtbx/boost_python/tensors.o cctbx/sgtbx/boost_python/tr_vec.o cctbx/sgtbx/boost_python/wyckoff.o cctbx/sgtbx/boost_python/select_generators.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' g++ -o lib/cctbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_masks_ext.so.0 cctbx/masks/boost_python/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so.0'->'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_miller_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_miller_ext.so.0 cctbx/miller/boost_python/miller_ext.o cctbx/miller/boost_python/asu.o cctbx/miller/boost_python/bins.o cctbx/miller/boost_python/change_basis.o cctbx/miller/boost_python/expand_to_p1.o cctbx/miller/boost_python/index_generator.o cctbx/miller/boost_python/index_span.o cctbx/miller/boost_python/match_bijvoet_mates.o cctbx/miller/boost_python/match_indices.o cctbx/miller/boost_python/match_multi_indices.o cctbx/miller/boost_python/merge_equivalents.o cctbx/miller/boost_python/phase_integrator.o cctbx/miller/boost_python/phase_transfer.o cctbx/miller/boost_python/sym_equiv.o cctbx/miller/boost_python/f_calc_map.o cctbx/miller/boost_python/lookup_utils.o cctbx/miller/boost_python/amplitude_normalisation.o cctbx/miller/boost_python/randomize_amplitude_and_phase.o cctbx/miller/boost_python/slices.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so.0'->'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so'->'lib/cctbx_masks_ext.so.0.0.1' g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' g++ -o lib/cctbx_geometry_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_ext.so.0 cctbx/geometry/boost_python/geometry_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so.0'->'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so'->'lib/cctbx_geometry_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1' g++ -o lib/cctbx_maptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_ext.so.0 cctbx/maptbx/boost_python/maptbx_ext.o cctbx/maptbx/boost_python/grid_indices_around_sites.o cctbx/maptbx/boost_python/grid_tags.o cctbx/maptbx/boost_python/gridding.o cctbx/maptbx/boost_python/misc.o cctbx/maptbx/boost_python/peak_search.o cctbx/maptbx/boost_python/pymol_interface.o cctbx/maptbx/boost_python/statistics.o cctbx/maptbx/boost_python/structure_factors.o cctbx/maptbx/boost_python/coordinate_transformers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1' g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1' g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1' g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o lib/cctbx_emma_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_emma_ext.so.0 cctbx/boost_python/emma_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so.0'->'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so'->'lib/cctbx_array_family_flex_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1' g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1' g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1' g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so.0'->'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so'->'lib/cctbx_french_wilson_ext.so.0.0.1' g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so.0'->'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so'->'lib/cctbx_anharmonic_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1' g++ -o lib/cctbx_merging_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_merging_ext.so.0 cctbx/merging/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1' g++ -o lib/dxtbx_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_model_ext.so.0 dxtbx/src/dxtbx/model/boost_python/beam.o dxtbx/src/dxtbx/model/boost_python/spectrum.o dxtbx/src/dxtbx/model/boost_python/goniometer.o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o dxtbx/src/dxtbx/model/boost_python/panel.o dxtbx/src/dxtbx/model/boost_python/detector.o dxtbx/src/dxtbx/model/boost_python/scan.o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o dxtbx/src/dxtbx/model/boost_python/crystal.o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o dxtbx/src/dxtbx/model/boost_python/experiment.o dxtbx/src/dxtbx/model/boost_python/experiment_list.o dxtbx/src/dxtbx/model/boost_python/model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so.0'->'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so'->'lib/cctbx_merging_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' g++ -o lib/cctbx_geometry_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_restraints_ext.so.0 cctbx/geometry_restraints/geometry_restraints_ext.o cctbx/geometry_restraints/bond_bpl.o cctbx/geometry_restraints/bond_similarity_bpl.o cctbx/geometry_restraints/bond_sorted_bpl.o cctbx/geometry_restraints/nonbonded_bpl.o cctbx/geometry_restraints/nonbonded_sorted_bpl.o cctbx/geometry_restraints/angle_bpl.o cctbx/geometry_restraints/dihedral_bpl.o cctbx/geometry_restraints/chirality_bpl.o cctbx/geometry_restraints/planarity_bpl.o cctbx/geometry_restraints/parallelity_bpl.o cctbx/geometry_restraints/motif_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1' Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1' g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_xray_observations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_observations_ext.so.0 cctbx/xray/observations/boost_python/observations.o cctbx/xray/observations/boost_python/observations_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' g++ -o lib/cctbx_crystal_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_crystal_ext.so.0 cctbx/crystal/crystal_ext.o cctbx/crystal/asu_clusters_bpl.o cctbx/crystal/close_packing_bpl.o cctbx/crystal/coordination_sequences_bpl.o cctbx/crystal/direct_space_asu_bpl.o cctbx/crystal/incremental_pairs_bpl.o cctbx/crystal/neighbors_bpl.o cctbx/crystal/pair_tables_bpl.o cctbx/crystal/site_cluster_analysis_bpl.o cctbx/crystal/symmetry_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1' g++ -o mmtbx/tls/decompose.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/decompose.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so.0'->'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so'->'lib/cctbx_statistics_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1' g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/dps_core.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/directional_fft.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libspotfinder.so.0 spotfinder/core_toolbox/spot.o spotfinder/core_toolbox/libdistl.o spotfinder/core_toolbox/hough.o spotfinder/core_toolbox/distl.o spotfinder/core_toolbox/spotfilter.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lann-cctbx -lomptbx -lm g++ -o rstbx/dps_core/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so.0'->'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so'->'lib/libspotfinder.so.0.0.1' g++ -o lib/libdxtbxspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libdxtbxspotfinder.so.0 spotfinder/dxtbx_toolbox/libdistl.o spotfinder/dxtbx_toolbox/distl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lann-cctbx -lomptbx -lm Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1' g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/indexing_api.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so.0'->'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so'->'lib/libdxtbxspotfinder.so.0.0.1' g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/ewald_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so.0'->'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so'->'lib/cctbx_crystal_ext.so.0.0.1' Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1' g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/partial_spot_position_partial_H.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/minpack/raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/raw.cpp gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/slatec/lib_c.c cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so.0'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lm Create symlinks for: 'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so.0'->'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so'->'lib/libscitbx_slatec.so.0.0.1' g++ -o smtbx/refinement/constraints/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/geometrical_hydrogens.cpp g++ -o smtbx/refinement/constraints/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_minpack.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_minpack.so.0 scitbx/minpack/raw.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lm Create symlinks for: 'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so.0'->'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so'->'lib/libscitbx_minpack.so.0.0.1' g++ -o smtbx/refinement/constraints/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libmmtbx_tls.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libmmtbx_tls.so.0 mmtbx/tls/decompose.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lm Create symlinks for: 'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so.0'->'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so'->'lib/libmmtbx_tls.so.0.0.1' g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lcctbx -lm Create symlinks for: 'lib/librstbx.so.0.0.1' 'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1' 'lib/librstbx.so'->'lib/librstbx.so.0.0.1' g++ -o smtbx/refinement/constraints/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/alignment/alignment_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/alignment/alignment_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/building/loop_closure/ccd_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/bulk_solvent_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/bulk_solvent/bulk_solvent_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/bulk_solvent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/bulk_solvent/bulk_solvent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/den/boost_python/den_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/boost_python/den_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/secondary_structure/dssp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/secondary_structure/dssp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/dynamics/dynamics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/dynamics/dynamics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/dynamics/dynamics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/dynamics/dynamics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/f_model/f_model_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/libmmtbx_masks.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libmmtbx_masks.so.0 mmtbx/masks/atom_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1' Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1' g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/geometry/boost_python/clash_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp g++ -o mmtbx/geometry/boost_python/indexing_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/primitive_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/primitive_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/den.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/boost_python/den_ext.cpp:12: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::den::den_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/boost_python/den_ext.cpp:53:78: required from here 53 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 54 | "shared_den_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so.0'->'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1' g++ -o mmtbx/hydrogens/hydrogens_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/hydrogens/hydrogens_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/object_manager.hpp:8, from /usr/include/boost/python/extract.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1' g++ -o mmtbx/masks/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/masks/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so.0'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/max_lik/max_lik_ext.cpp g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/max_lik/max_lik.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_primitive_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_primitive_ext.so.0 mmtbx/geometry/boost_python/primitive_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so.0'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' g++ -o mmtbx/bulk_solvent/mosaic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/bulk_solvent/mosaic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1' g++ -o mmtbx/ncs/cartesian_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/ncs/cartesian_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' g++ -o mmtbx/ncs/tncs_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/ncs/tncs_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1' g++ -o mmtbx/pair_interaction/interaction_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/pair_interaction/interaction_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1' g++ -o mmtbx/probe/boost_python/probe_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/boost_python/probe_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/Scoring.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/Scoring.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1' g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/DotSpheres.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/SpatialQuery.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1' g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/boost_python/reduce_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so.0'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' g++ -o mmtbx/reduce/PositionReturn.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/PositionReturn.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/InteractionGraph.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/Optimizers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h:314:35: required from here 314 | r = target_phi_psi(general_table, sites_cart, proxy);} | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 269 | for(int i=0; i, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 284 | for(int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/format/parsing.hpp:21, from /usr/include/boost/format.hpp:50, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral.h:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75: required from here 52 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 53 | "shared_phi_psi_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1' g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/rotamer/fit_ext.cpp g++ -o lib/mmtbx_ncs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_ext.so.0 mmtbx/ncs/tncs_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so.0'->'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so'->'lib/mmtbx_ncs_ext.so.0.0.1' g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/rsr/rsr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/reference_coordinate.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41: required from here 80 | cctbx::geometry_restraints::shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/scaling_ext.cpp ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ranlib probe/lib/libprobelib.a g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/twinning_bpl.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25: required from here 61 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 62 | "shared_reference_coordinate_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so.0'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/relative_scaling_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/outlier_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_rsr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rsr_ext.so.0 mmtbx/rsr/rsr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so.0'->'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so'->'lib/mmtbx_rsr_ext.so.0.0.1' Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1' g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/secondary_structure/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/decompose_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/decompose_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so.0'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' g++ -o mmtbx/tls/tls_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/tls_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/optimise_amplitudes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/optimise_amplitudes_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o mmtbx/tls/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' g++ -o mmtbx/tls/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/utils/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o ranlib reduce/lib/libreduce2lib.a g++ -o mmtbx/validation/ramachandran/rama_eval_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/validation/ramachandran/rama_eval_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' g++ -o omptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/omptbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/array_family/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/array_family/ext.cpp g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' g++ -o rstbx/array_family/flex_rstbx_arrays.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/array_family/flex_rstbx_arrays.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/bandpass/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/bandpass/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/src -Irstbx/bandpass/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/bpcx/detector_model/detector_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/detector_model_ext.cpp g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lomptbx -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1' g++ -o rstbx/bpcx/detector_model/sensor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/sensor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/sensor.h:3, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/sensor.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o rstbx/diffraction/fastbragg/fastbragg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h: In constructor ‘rstbx::bandpass::active_area_filter::active_area_filter(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:100:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i < tiles.size()/4; ++i){ | ~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h: In member function ‘bool rstbx::bandpass::active_area_filter::operator()(rstbx::bandpass::vec3, const int&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:126:39: warning: comparison of integer expressions of different signedness: ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ~~~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:126:9: note: in expansion of macro ‘SCITBX_ASSERT’ 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/subpixel_joint_model.h: In member function ‘void rstbx::bandpass::subpixel_joint_model::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/subpixel_joint_model.h:26:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 26 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/subpixel_joint_model.h:31:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 31 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::prescreen_indices(const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:46:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared rstbx::bandpass::use_case_bp3::selected_partialities() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:93:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:152:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 152 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow_force()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:296:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 296 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:462:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 462 | for ( int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectangles(rstbx::bandpass::vec3ref)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:477:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 477 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectregions(rstbx::bandpass::vec3ref, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:511:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 511 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::enclosed_pixels() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:543:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 543 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hi_predictions() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:752:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 752 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_lo_predictions() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:763:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 763 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:774:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 774 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions_labelit_format() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:787:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 787 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hkls() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:802:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 802 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::restricted_to_active_areas(scitbx::af::shared, scitbx::af::shared >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:815:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 815 | for (int idx = 0; idx < active_areas.size(); idx+=4){ | ~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:828:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 828 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ //DEPRECATED | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In function ‘scitbx::af::shared > rstbx::bandpass::ext::use_case_bp2_picture_fast_slow(scitbx::af::shared >, const cctbx::crystal_orientation&, const scitbx::vec3&, const double&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const double&, const scitbx::vec3&, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:933:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 933 | for (int idx = 0; idx < indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = resolution_limited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:616:87: required from here 616 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = unlimited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:620:78: required from here 620 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1' g++ -o rstbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1' g++ -o rstbx/indexing_api/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/indexing_api/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o rstbx/apps/integration_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/apps/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/src -Irstbx/apps/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/integration_ext.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = scitbx::vec3; MillerConversionPolicy = rstbx::diffraction::fastbragg::vec3_double_miller_index_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:134:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = cctbx::miller::index<>; MillerConversionPolicy = rstbx::diffraction::fastbragg::integer_miller_index_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:138:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 138 | .def("sweep_over_detector_integer_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | rstbx::diffraction::fastbragg::miller_t, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 | rstbx::diffraction::fastbragg::integer_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/simage/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/simage/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/src -Irstbx/simage/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_validation_ramachandran_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_validation_ramachandran_ext.so.0 mmtbx/validation/ramachandran/rama_eval_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' g++ -o rstbx/simulation/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/simulation/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/src -Irstbx/simulation/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/scope.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:4: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/rstbx_bpcx_detector_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bpcx_detector_model_ext.so.0 rstbx/bpcx/detector_model/detector_model_ext.o rstbx/bpcx/detector_model/sensor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so.0'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/symmetry/constraints/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/symmetry/constraints/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/symmetry/constraints/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/real_to_complex.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/directional_fft.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/dps_core.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/indexing_api.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/indexing_api.h:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 59 | for (int i=0; i < x_data.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::pdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::cdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::gradients(scitbx::af::shared, const int&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 129 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 135 | for (int i = 0; i < gradients.size(); ++i){ | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int x = 0; x < indices_all.size(); ++x){ | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa > rstbx::xfel1::raw_diffraction(scitbx::af::shared, scitbx::af::versa >, const size_t&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 178 | for (int mcount=0; mcount::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | for (int isel = 0; isel < selected.size(); ++isel){ | ~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp: In member function ‘rstbx::simage::image_simple& rstbx::simage::image_simple::compute(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const scitbx::mat3&, double, double, int, double, scitbx::vec2, scitbx::vec2, unsigned int, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp:144:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 144 | for(int i=0;i<=point_spread;i++) { | ~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp:148:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 148 | for(int j=0;j<=point_spread;j++) { | ~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp: In function ‘std::string rstbx::simage::ext::combine_rgb_images(const boost::python::list&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp:58:42: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | TBXX_ASSERT(bp::len(rgb_images[j]) == img_size); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/libdistl.h:81, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/distl.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/integration_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/scanbox.h: In member function ‘Distl::interval_list Distl::scanbox_tiling_explicit::generate_defined_x_tiles(const int&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/scanbox.h:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | for (int tile = 0 ; tile < tile_count; ++tile){ | ~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::append_ISmask(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:222:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 222 | for (int i=0; i < mask.size(); i+=2){ | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::positional_correction_mapping(scitbx::af::shared >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:273:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 273 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 287 | for (int p=0; p >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:310:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 310 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 320 | for (int p=0; p > rstbx::integration::simple_integration::safe_background(const scitbx::af::flex_int&, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:366:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 366 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 378 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 395 | for (int i=0; i >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 495 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 550 | for (int i=0; i >, scitbx::af::shared >, scitbx::af::shared >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:575:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 575 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int k=0; k::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 638 | for (int k=0; k'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so.0'->'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_grid.cpp g++ -o lib/rstbx_diffraction_fastbragg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_diffraction_fastbragg_ext.so.0 rstbx/diffraction/fastbragg/fastbragg_ext.o rstbx/diffraction/fastbragg/fastbragg.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = cctbx::crystal_orientation]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const cctbx::crystal_orientation&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = cctbx::crystal_orientation]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/mmtbx_tls_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_ext.so.0 mmtbx/tls/tls_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so.0'->'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp: In member function ‘const char* scitbx::af::boost_python::cost_of_m_handle_in_af_shared::operator()(unsigned int, unsigned int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:367:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 367 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:375:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 375 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:383:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 383 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h: In instantiation of ‘scitbx::af::shared scitbx::af::reindexing_array(std::size_t, const const_ref&) [with IntType = int; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:544:7: required from here 544 | reindexing_array, | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h:156:35: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 156 | SCITBX_ASSERT(iselection[i] < selectee_size); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h:156:7: note: in expansion of macro ‘SCITBX_ASSERT’ 156 | SCITBX_ASSERT(iselection[i] < selectee_size); | ^~~~~~~~~~~~~ g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/rstbx_simulation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simulation_ext.so.0 rstbx/simulation/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so.0'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/c_grid_flex_conversions.h:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:84:46: required from here 84 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:85:45: required from here 85 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:86:36: required from here 86 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:87:36: required from here 87 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:88:36: required from here 88 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:89:36: required from here 89 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:90:37: required from here 90 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:91:39: required from here 91 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:92:39: required from here 92 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:93:39: required from here 93 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:94:39: required from here 94 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:95:39: required from here 95 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:96:53: required from here 96 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:97:53: required from here 97 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:98:53: required from here 98 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:100:50: required from here 100 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:101:51: required from here 101 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:102:55: required from here 102 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:103:55: required from here 103 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:104:55: required from here 104 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:105:58: required from here 105 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:106:53: required from here 106 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:107:53: required from here 107 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:108:53: required from here 108 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:110:54: required from here 110 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:112:46: required from here 112 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:113:46: required from here 113 | tuple_mapping_fixed_size >(); // scitbx/math/golay.h | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:115:49: required from here 115 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:117:50: required from here 117 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:118:50: required from here 118 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:119:50: required from here 119 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:120:50: required from here 120 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:122:53: required from here 122 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:123:53: required from here 123 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:124:53: required from here 124 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:127:51: required from here 127 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:128:52: required from here 128 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:129:42: required from here 129 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:130:42: required from here 130 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:131:45: required from here 131 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:132:63: required from here 132 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:133:45: required from here 133 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:134:49: required from here 134 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:135:51: required from here 135 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:136:52: required from here 136 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:137:42: required from here 137 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:138:42: required from here 138 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:139:45: required from here 139 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:140:45: required from here 140 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:141:49: required from here 141 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:143:60: required from here 143 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:144:60: required from here 144 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:146:54: required from here 146 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:147:54: required from here 147 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:148:54: required from here 148 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:149:54: required from here 149 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:150:54: required from here 150 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:151:54: required from here 151 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:153:64: required from here 153 | tuple_mapping_fixed_capacity(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 3>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:154:56: required from here 154 | tuple_mapping_fixed_capacity, 3> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 2>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:155:56: required from here 155 | tuple_mapping_fixed_capacity, 2> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 6>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:156:59: required from here 156 | tuple_mapping_fixed_capacity, 6> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 7>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:157:59: required from here 157 | tuple_mapping_fixed_capacity, 7> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:158:59: required from here 158 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:159:59: required from here 159 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/rstbx_indexing_api_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_indexing_api_ext.so.0 rstbx/indexing_api/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so.0'->'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:429:8: required from here 429 | def("first_index", f_w::first_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:430:8: required from here 430 | def("last_index", f_w::last_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = bool]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = bool]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = bool]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o lib/rstbx_integration_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_integration_ext.so.0 rstbx/apps/integration_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lann-cctbx -lann_adaptor -lspotfinder -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so.0'->'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 154 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 190 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 206 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘std::string scitbx::af::{anonymous}::mathematica_form(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 452 | for (int i=1; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 454 | if (i != indices.size() - 1) o << ","; | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:365:26: required from here 365 | return matrix::norm_1(self); | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | for (int i=0; i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = signed char]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = signed char]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:536:8: required from here 536 | def( | ~~~^ 537 | "double_from_byte_str", | ~~~~~~~~~~~~~~~~~~~~~~~ 538 | shared_from_byte_str, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 | (arg("byte_str"))); | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long unsigned int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long unsigned int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = signed char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74: required from here 119 | double (*matrix_norm_1)(const_ref const &) = matrix::norm_1; | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int i=0; i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned char]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned char]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_inf(const scitbx::af::const_ref >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 32 | for (int i=0; i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:34:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int j=0; j >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 | .def("matrix_norm_frobenius", matrix::norm_frobenius) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]); | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short unsigned int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short unsigned int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = float]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = float]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = float]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = double]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = double]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::complex]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::complex]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::complex]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:885:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 885 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:886:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 886 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::__cxx11::basic_string]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::__cxx11::basic_string]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; Create symlinks for: 'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sort.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so.0'->'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_histogram.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_weighted_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_weighted_histogram.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mean_and_variance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_median.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_linear_interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics scitbx::math::median_functor::dispersion(const scitbx::af::ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:31:26: required from ‘static scitbx::math::median_statistics scitbx::af::boost_python::median_functor_wrapper::dispersion(wt&, const scitbx::af::const_ref&) [with FloatType = double; wt = scitbx::math::median_functor]’ 31 | return O.dispersion(af::make_ref(buffer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:40:13: required from ‘static void scitbx::af::boost_python::median_functor_wrapper::wrap(const char*) [with FloatType = double]’ 36 | class_(name, no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | .def(init<>()) | ~~~~~~~~~~~~~~ 38 | .def(init(arg("seed"))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | .def("__call__", call, arg("data")) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | .def("dispersion", dispersion, arg("data")) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:63:41: required from here 63 | median_functor_wrapper::wrap("median_functor"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (int i=0; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp g++ -o scitbx/array_family/boost_python/flex_tiny_size_t_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp: In function ‘scitbx::af::flex >::type* scitbx::af::{anonymous}::array_indices_as_double_from_array_focus_dimensions(const scitbx::vec2&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:128:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 128 | for(std::size_t i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec2]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec2]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec2]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/loops.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/show_sizes.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::sym_mat3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::sym_mat3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::af::tiny]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::af::tiny]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = tiny]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::mat3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::mat3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::af::tiny; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec2*; _Size = long unsigned int; _Tp = scitbx::vec2]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::mat3*; _Size = long unsigned int; _Tp = scitbx::mat3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::sym_mat3*; _Size = long unsigned int; _Tp = scitbx::sym_mat3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp: In instantiation of ‘std::map > scitbx::cubicle_neighbors::neighbors_of(const scitbx::af::const_ref >&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp:23:36: required from here 23 | .def("neighbors_of", &w_t::neighbors_of, ( | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:61:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 61 | if (i_cub[0] < 0 || i_cub[0] >= n_cubicles[0]) continue; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:63:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 63 | if (i_cub[1] < 0 || i_cub[1] >= n_cubicles[1]) continue; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:65:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 65 | if (i_cub[2] < 0 || i_cub[2] >= n_cubicles[2]) continue; In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:40:53: required from here 40 | shared_wrapper, rir>::wrap("stl_vector_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:41:51: required from here 41 | shared_wrapper, rir>::wrap("stl_vector_double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:42:50: required from here 42 | shared_wrapper, rir>::wrap("stl_set_unsigned") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:48:37: required from here 48 | shared_wrapper >::wrap("mat3_int"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:49:40: required from here 49 | shared_wrapper >::wrap("tiny_int_3"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:50:40: required from here 50 | shared_wrapper >::wrap("tiny_int_4"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:51:40: required from here 51 | shared_wrapper >::wrap("tiny_int_2"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = scitbx::vec3; CubicleContentType = std::vector::cubicle_site, std::allocator::cubicle_site> >; FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:43:30: required from ‘scitbx::cubicle_neighbors::cubicle_neighbors(const scitbx::af::const_ref >&, const FloatType&, const FloatType&) [with FloatType = double]’ 43 | cubicles_.i_cubicle(main_sites_cart[i_seq])); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; Value = scitbx::cubicle_neighbors<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<3>::apply::execute(PyObject*, t0, t1, t2) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector3 >&, const double&, const double&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const double&; t2 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector3 >&, const double&, const double&>; Arity = boost::mpl::size >&, const double&, const double&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const double&, const double&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const double&, const double&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const double&, const double&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const double&, const double&>; W = scitbx::cubicle_neighbors<>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp:16:13: required from here 15 | class_("cubicle_neighbors", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 16 | .def(init< | ~~~~^~~~~~ 17 | af::const_ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 18 | double const&, | ~~~~~~~~~~~~~~ 19 | double const&>(( | ~~~~~~~~~~~~~~~~ 20 | arg("main_sites_cart"), | ~~~~~~~~~~~~~~~~~~~~~~~ 21 | arg("cubicle_edge"), | ~~~~~~~~~~~~~~~~~~~~ 22 | arg("epsilon")=1.e-6))) | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec2; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/glmtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/glmtbx/boost_python/ext.cc In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/gridding.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::sym_mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::sym_mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/graphics_utils/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/graphics_utils/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/iso_surface/iso_surface_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgs/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgs/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable scitbx/lbfgs/lbfgs_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/lbfgs_fem.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgsb/boost_python/lbfgsb_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/linalg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_iso_surface_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_iso_surface_ext.so.0 scitbx/iso_surface/iso_surface_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_glmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_glmtbx_ext.so.0 scitbx/glmtbx/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so.0'->'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so'->'lib/scitbx_iso_surface_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/householder.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so.0'->'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so'->'lib/scitbx_glmtbx_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/eigensystem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::minimizer(const int&, const int&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, bool, const FloatType&, const FloatType&, const int&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value >; A3 = boost::python::objects::reference_to_value >; A4 = boost::python::objects::reference_to_value >; A5 = bool; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; Value = scitbx::lbfgsb::minimizer; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<9>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; PyObject = _object; t0 = const int&; t1 = const int&; t2 = scitbx::af::shared; t3 = scitbx::af::shared; t4 = scitbx::af::shared; t5 = bool; t6 = const double&; t7 = const double&; t8 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; Arity = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, not_specified, not_specified, not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = scitbx::lbfgsb::minimizer; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:20:13: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 19 | class_("minimizer", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 20 | .def(init, | ~~~~~~~~~~~~~~~~~~~~~~ 23 | af::shared, | ~~~~~~~~~~~~~~~~~~~~~~ 24 | af::shared, | ~~~~~~~~~~~~~~~~ 25 | bool, | ~~~~~ 26 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 27 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 28 | int const&>()) | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:118:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 118 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:118:9: note: in expansion of macro ‘SCITBX_ASSERT’ 118 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:119:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 119 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:119:9: note: in expansion of macro ‘SCITBX_ASSERT’ 119 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:120:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 120 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:120:9: note: in expansion of macro ‘SCITBX_ASSERT’ 120 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lstbx/boost_python/lstbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lstbx/boost_python/normal_equations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lstbx/boost_python/normal_equations.cpp Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp: In function ‘int scitbx::lapack::boost_python::dsyev_wrapper(const std::string&, const std::string&, const scitbx::af::ref >&, const scitbx::af::ref&, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 246 | SCITBX_ASSERT(w.size() == n); | ~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:5: note: in expansion of macro ‘SCITBX_ASSERT’ 246 | SCITBX_ASSERT(w.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/basic_statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1' g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/golay.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/minimum_covering_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/principal_axes_of_inertia.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/row_echelon.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1' g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1' g++ -o scitbx/math/boost_python/chebyshev.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/chebyshev.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1' g++ -o scitbx/math/boost_python/icosahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/icosahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/slatec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/slatec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/line_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/line_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/r3_rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/r3_rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/resample.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/resample.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/quadrature.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/quadrature.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/unimodular_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/unimodular_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/halton.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/halton.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/least_squares_plane.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/least_squares_plane.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/math/boost_python/continued_fraction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/continued_fraction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' g++ -o scitbx/math/boost_python/numeric_limits.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/numeric_limits.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/exp_functions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/exp_functions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/zernike.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/2d_zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/2d_zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/weighted_covariance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/weighted_covariance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/tetrahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/tetrahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/angle_derivative.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/angle_derivative.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/minpack/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/r3_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/r3_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/raw.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h: In member function ‘void scitbx::minpack::levenberg_marquardt::process_fvec(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h:80:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | SCITBX_ASSERT(fvec.size() == m); | ~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h:80:9: note: in expansion of macro ‘SCITBX_ASSERT’ 80 | SCITBX_ASSERT(fvec.size() == m); | ^~~~~~~~~~~~~ g++ -o scitbx/random/boost_python/random_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/random/boost_python/random_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/random/boost_python/basic_distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/random/boost_python/basic_distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/rigid_body/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/vector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/vector.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/sparse/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/matrix.cpp Create symlinks for: 'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so.0'->'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so'->'lib/scitbx_minpack_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/approx_equal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/approx_equal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_r3_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_r3_utils_ext.so.0 scitbx/r3_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rotr3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/spatial_lib.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/featherstone.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 4]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:361:21: required from ‘scitbx::rotr3 scitbx::rigid_body::joint_lib::six_dof_aja_simplified(const scitbx::vec3&, const scitbx::af::const_ref&) [with FloatType = double]’ 361 | af::tiny qe(&q[0], &q[4]); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:24:49: required from here 24 | result = joint_lib::six_dof_aja_simplified(center_of_mass, q); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_matrix.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/spatial_lib.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/featherstone.h:683:31: required from ‘scitbx::af::shared > scitbx::rigid_body::featherstone::system_model::inverse_dynamics(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&) [with FloatType = double]’ 683 | tau_array[ib] = af::small(f[ib].begin(), f[ib].end()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/featherstone.h:705:21: required from ‘scitbx::af::shared scitbx::rigid_body::featherstone::system_model::inverse_dynamics_packed(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with FloatType = double]’ 705 | tau_array = inverse_dynamics( | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:120:46: required from here 120 | .def("inverse_dynamics_packed", &wt::inverse_dynamics_packed, ( | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h: In instantiation of ‘scitbx::af::shared > > scitbx::rigid_body::tardy::construct_bodies(const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const boost::python::api::object&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:203:54: required from ‘scitbx::rigid_body::tardy::model::model(const boost::python::api::object&, const scitbx::af::shared >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, const ft&) [with FloatType = double; ft = double]’ 203 | featherstone::system_model(construct_bodies( | ~~~~~~~~~~~~~~~~^ 204 | sites_.const_ref(), | ~~~~~~~~~~~~~~~~~~~ 205 | masses_.const_ref(), | ~~~~~~~~~~~~~~~~~~~~ 206 | tardy_tree_.attr("cluster_manager"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | near_singular_hinges_angular_tolerance_deg_)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = scitbx::rigid_body::tardy::model<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; PyObject = _object; t0 = const boost::python::api::object&; t1 = const scitbx::af::shared >&; t2 = const scitbx::af::shared&; t3 = const boost::python::api::object&; t4 = const boost::python::api::object&; t5 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; Arity = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:344:31: required from ‘static void boost::python::detail::define_class_init_helper::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, boost::python::detail::keyword_range) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; int NDefaults = 1; boost::python::detail::keyword_range = std::pair]’ 344 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedT = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional > >; classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedVisitor = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >; W = scitbx::rigid_body::tardy::model<>; X1 = boost::python::bases >; X2 = boost::noncopyable_::noncopyable; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:151:13: required from here 146 | class_ >, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | boost::noncopyable | ~~~~~~~~~~~~~~~~~~ 149 | >("tardy_model", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .enable_pickling() | ~~~~~~~~~~~~~~~~~~ 151 | .def(init< | ~~~~^~~~~~ 152 | object const&, | ~~~~~~~~~~~~~~ 153 | af::shared > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | af::shared const&, | ~~~~~~~~~~~~~~~~~~~~~~ 155 | object const&, | ~~~~~~~~~~~~~~ 156 | object const&, | ~~~~~~~~~~~~~~ 157 | optional >(( | ~~~~~~~~~~~~~~~~~~~~~~~ 158 | arg("labels"), | ~~~~~~~~~~~~~~ 159 | arg("sites"), | ~~~~~~~~~~~~~ 160 | arg("masses"), | ~~~~~~~~~~~~~~ 161 | arg("tardy_tree"), | ~~~~~~~~~~~~~~~~~~ 162 | arg("potential_obj"), | ~~~~~~~~~~~~~~~~~~~~~ 163 | arg("near_singular_hinges_angular_tolerance_deg")=5))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:163:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 163 | SCITBX_ASSERT(body->parent < nc); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:163:9: note: in expansion of macro ‘SCITBX_ASSERT’ 163 | SCITBX_ASSERT(body->parent < nc); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 1]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:648:13: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::revolute::new_q(const scitbx::af::const_ref&) const [with FloatType = double]’ 648 | af::tiny(q.begin(), q.end()))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:643:5: required from here 643 | new_q( | ^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 12]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:45:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::rbda_eq_4_13(const scitbx::af::tiny&) [with FloatType = double]’ 45 | return af::tiny(coeffs, coeffs+4*3) * ft(0.5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:279:21: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::six_dof::time_step_position(const scitbx::af::const_ref&, const ft&) const [with FloatType = double; ft = double]’ 279 | rbda_eq_4_13(unit_quaternion), w_body_frame); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:271:5: required from here 271 | time_step_position( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 16]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:79:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::d_unit_quaternion_d_qe_matrix(const scitbx::af::tiny&) [with FloatType = double]’ 79 | return af::tiny(coeffs, coeffs+4*4) / n3; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:317:58: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 317 | af::tiny d = d_unit_quaternion_d_qe_matrix(qe); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:324:24: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 324 | af::small result(cn.begin(), cn.end()); | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o lib/scitbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_flex_ext.so.0 scitbx/array_family/boost_python/flex_ext.o scitbx/array_family/boost_python/flex_grid.o scitbx/array_family/boost_python/flex_bool.o scitbx/array_family/boost_python/flex_size_t.o scitbx/array_family/boost_python/flex_int.o scitbx/array_family/boost_python/flex_float.o scitbx/array_family/boost_python/flex_double.o scitbx/array_family/boost_python/flex_double_matrix.o scitbx/array_family/boost_python/flex_complex_double.o scitbx/array_family/boost_python/flex_std_string.o scitbx/array_family/boost_python/flex_random.o scitbx/array_family/boost_python/flex_sort.o scitbx/array_family/boost_python/flex_histogram.o scitbx/array_family/boost_python/flex_weighted_histogram.o scitbx/array_family/boost_python/flex_mean_and_variance.o scitbx/array_family/boost_python/flex_median.o scitbx/array_family/boost_python/flex_linear_interpolation.o scitbx/array_family/boost_python/flex_vec3_double.o scitbx/array_family/boost_python/flex_vec2_double.o scitbx/array_family/boost_python/flex_vec3_int.o scitbx/array_family/boost_python/flex_sym_mat3_double.o scitbx/array_family/boost_python/flex_mat3_double.o scitbx/array_family/boost_python/flex_tiny_size_t_2.o scitbx/array_family/boost_python/loops.o scitbx/array_family/boost_python/show_sizes.o scitbx/array_family/boost_python/numpy_bridge.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 g++ -o scitbx/sparse/boost_python/lu_factorization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/lu_factorization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/sparse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/set_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/vector_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so.0'->'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so'->'lib/scitbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:52:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 52 | bp::class_ >(python_name.c_str()) | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:10:35: required from here 10 | vector_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp:9:32: required from here 9 | set_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:11:33: required from here 11 | vector_wrapper::wrap("double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp:10:35: required from here 10 | set_wrapper::wrap("stl_string"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:14:50: required from here 14 | vector_wrapper, rir>::wrap("set_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/suffixtree/boost_python/object_extensions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/wigner/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/wigner/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_matrix.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/array_as_list.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:3: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1' g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/ab_initio/ab_initio_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' g++ -o smtbx/array_family/af_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/array_family/af_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/constraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so.0'->'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so'->'lib/smtbx_array_family_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_wigner_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_wigner_ext.so.0 scitbx/wigner/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so.0'->'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so'->'lib/scitbx_wigner_ext.so.0.0.1' Create symlinks for: 'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so.0'->'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so'->'lib/scitbx_stl_set_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_rigid_body_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_rigid_body_ext.so.0 scitbx/rigid_body/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so.0'->'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so'->'lib/scitbx_rigid_body_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_suffixtree_single_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_single_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_single_ext.o scitbx/suffixtree/boost_python/object_extensions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so.0'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' g++ -o smtbx/refinement/boost_python/least_squares_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/boost_python/least_squares_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/weighting_schemes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/boost_python/weighting_schemes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/least_squares.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/boost_python/least_squares.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/restraints/boost_python/origin_fixing.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1' g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/restraints/boost_python/restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/structure_factors/direct/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/standard_xray.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/structure_factors/direct/boost_python/standard_xray.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_distl_spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/flex_distl_spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/boost_python/distltbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/distltbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/diffraction/geometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/diffraction/geometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/dxtbx_toolbox/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/dxtbx_toolbox/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/src -Ispotfinder/dxtbx_toolbox/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/hough_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/std_pair_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=std_pair_ext.so.0 boost_adaptbx/std_pair_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so.0'->'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so'->'lib/std_pair_ext.so.0.0.1' g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/masks/tst_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/regression_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_accessors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:15: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<1>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:127:11: required from here 127 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<4>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:145:11: required from here 145 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<2>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:172:11: required from here 172 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<3>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:202:11: required from here 202 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:248:11: required from here 248 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:280:11: required from here 280 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:326:11: required from here 326 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:371:11: required from here 371 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ g++ -o scitbx/array_family/tst_af_1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so.0'->'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so'->'lib/spotfinder_hough_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/list.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78: required from here 156 | scitbx::boost_python::container_conversions::variable_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72: required from here 160 | scitbx::boost_python::container_conversions::linked_list_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71: required from here 164 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71: required from here 168 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75: required from here 172 | scitbx::boost_python::container_conversions::fixed_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/tiny_plain_apply.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:10: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::small_plain]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::small]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:621:46: required from here 621 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared_plain]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:624:48: required from here 624 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:629:42: required from here 629 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_1() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:635:64: required from here 634 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 | af::versa_plain > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:637:58: required from here 636 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 | af::versa > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/small_plain_apply.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = int; long unsigned int N = 128]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:41:17: required from ‘static void {anonymous}::array_exercise::run_1() [with ArrayType = scitbx::af::small_plain]’ 41 | ArrayType a5(a4.begin(), a4.begin()); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:28:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 28 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_2.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_af_3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o scitbx/array_family/tst_af_4.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_4.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_5.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_3.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_4.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_5.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/smtbx_refinement_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_constraints_ext.so.0 smtbx/refinement/constraints/boost_python/affine.o smtbx/refinement/constraints/boost_python/constraints_ext.o smtbx/refinement/constraints/boost_python/direction.o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o smtbx/refinement/constraints/boost_python/occupancy.o smtbx/refinement/constraints/boost_python/reparametrisation.o smtbx/refinement/constraints/boost_python/rigid.o smtbx/refinement/constraints/boost_python/same_group.o smtbx/refinement/constraints/boost_python/scaled_adp.o smtbx/refinement/constraints/boost_python/scatterer_parameters.o smtbx/refinement/constraints/boost_python/shared.o smtbx/refinement/constraints/boost_python/special_position.o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/smtbx_refinement_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_restraints_ext.so.0 smtbx/refinement/restraints/boost_python/origin_fixing.o smtbx/refinement/restraints/boost_python/restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so.0'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_dxtbx_ext.so.0 spotfinder/dxtbx_toolbox/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -ldxtbxspotfinder -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_ref_matrix_facet.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so.0'->'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so'->'lib/spotfinder_dxtbx_ext.so.0.0.1' g++ -o scitbx/array_family/tst_sym_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_sym_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_mat3.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/regression_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=regression_test_ext.so.0 scitbx/array_family/boost_python/regression_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_optional_copy.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so.0'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/rectangular_full_packed.h:3, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so.0'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_vec3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 52 | for(int i=0; i::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/tiny_algebra.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_rectangular_full_packed -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_rectangular_full_packed.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_vec3.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/error/tst_error.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/error -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error/tst_error.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/fftpack/timing/fftpack_timer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/fftpack/timing/test0.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/test0.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/lbfgs/sdrive_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable scitbx/lbfgs/sdrive_fem.cpp g++ -o scitbx/error/tst_error -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgs/tst_lbfgs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/sdrive_fem.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/complex_to_complex_3d.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/test0.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:82:19: required from here 82 | write_ref1(" ", wa.get1(j+1,n)); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:72:11: required from here 72 | setulb( | ~~~~~~^ 73 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:102:19: required from here 102 | write_ref1(" ", x); | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:70:11: required from here 70 | setulb( | ~~~~~~^ 71 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/math/tests/tst.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/math/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/tests/tst.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_distltbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_distltbx_ext.so.0 spotfinder/core_toolbox/boost_python/distltbx_ext.o spotfinder/diffraction/geometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/fftpack/timing/fftpack_timer -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/fftpack_timer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/math/tests/tst -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_givens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_householder.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so.0'->'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so'->'lib/spotfinder_distltbx_ext.so.0.0.1' g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/serialization -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization/tst_base_256.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/fftpack/timing/test0 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/test0.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/lbfgsb/dev/driver3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/sparse/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/tests/tst_sparse.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_timer -lboost_chrono -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/tests/tst_reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/tests/tst_special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/matrix/tests/tst_cholesky -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_cholesky.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_svd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so.0'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_reparametrisation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o lib/smtbx_refinement_least_squares_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_least_squares_ext.so.0 smtbx/refinement/boost_python/least_squares_ext.o smtbx/refinement/boost_python/weighting_schemes.o smtbx/refinement/boost_python/least_squares.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system Create symlinks for: 'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so.0'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' g++ -o lib/spotfinder_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_array_family_flex_ext.so.0 spotfinder/array_family/flex_ext.o spotfinder/array_family/flex_distl_spot.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so.0'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_4 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_4.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm scons: done building targets. usr+sys time: 31.56 seconds wall clock time: 17 minutes 9.39 seconds (1029.39 seconds total) iconv -f ISO-8859-1 -t UTF-8 cctbx/eltbx/covalent_radii.h > covalent_radii.h mv covalent_radii.h cctbx/eltbx/covalent_radii.h # cp all extensions into the python build directory # special case for an extension used during test dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_/lib/*_ext.so '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_/scitbx/array_family/boost_python/regression_test_ext.so '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build' # cp the dxtbx pybind11 extension at the right place. dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_/lib/dxtbx_flumpy.so '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build' make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' # DOES NOT WORK, source code must be modified in order to find the expected # /usr/share/cctbx libtbx_env file during the build process make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars rm -fr -- debian/.debhelper/generated/libcctbx0/ debian/libcctbx0/ debian/tmp/ debian/.debhelper/generated/libcctbx-dev/ debian/libcctbx-dev/ debian/.debhelper/generated/python3-cctbx/ debian/python3-cctbx/ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' # install the cctbx python modules dh_auto_install install -m0755 -d /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 --dest-dir /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx running install_lib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12 creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/pytest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/fastentrypoints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_direction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_disorder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_same_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/conftest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/development.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/overload.py to overload.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Format.py to Format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Registry.py to Registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/image.py to image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nexus.py to nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/beam.py to beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/compare.py to compare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/crystal.py to crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/profile.py to profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan.py to scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/filename.py to filename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/load.py to load.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/xds.py to xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/datablock.py to datablock.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache.py to filecache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/flumpy.py to flumpy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/frames.py to frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/api.py to api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/riso.py to riso.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/striping.py to striping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/components.py to components.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/graph.py to graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:777: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:792: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:793: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:812: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:831: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:860: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/application.py to application.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/worker.py to worker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/absorption.py to absorption.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark0.py to mark0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark1.py to mark1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark10.py to mark10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark3.py to mark3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/job.py to job.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/tag.py to tag.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/task.py to task.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/trial.py to trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/mp.py to mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/split_detector.py to split_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/isoform.py to isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/simulate.py to simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/python.py to python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/github.py to github.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/formula.py to formula.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/henke.py to henke.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/location_part.py to location_part.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/box.py to box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mem.py to mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/dev.py to dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/replay.py to replay.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/shelx.py to shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adptbx.py to adptbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/math_module.py to math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/multipolar.py to multipolar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_examples.py to run_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/translation_search.py to translation_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/watch_file.py to watch_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/split.py to split.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/equivalence.py to equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/intrinsics.py to intrinsics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tokenization.py to tokenization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout.py to tst_cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_read.py to tst_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/fonts.py to fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl.py to gl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/glu.py to glu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/images.py to images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/quadrics.py to quadrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/common.py to common.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/edf.py to edf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/mar.py to mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/noir.py to noir.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/npy.py to npy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/models.py to models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/download.py to download.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/records.py to records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py to utils.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:8: SyntaxWarning: invalid escape sequence '\{' /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/writer.py to writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/correction.py to correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xparm.py to xparm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_plots.py to data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/format.py to format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/logfiles.py to logfiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_manager.py to map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phases.py to phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/poscar.py to poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pymol.py to pymol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ranges.py to ranges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/symmetry.py to symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/wildcard.py to wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/help.py to help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install.py to install.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/scons.py to scons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/timers.py to timers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/interface.py to interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/parser.py to parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/pytest.py to pytest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/binary_search.py to binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/callbacks.py to callbacks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cli.py to cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/complex_math.py to complex_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/console_utils.py to console_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/containers.py to containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/dlite.py to dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_run.py to easy_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py to fastentrypoints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/introspection.py to introspection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/load_env.py to load_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/log.py to log.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/math_utils.py to math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/objgraph.py to objgraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_template.py to program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/progress.py to progress.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyframe.py to pyframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyplot.py to pyplot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/simplexml.py to simplexml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/smart_open.py to smart_open.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/str_utils.py to str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subversion.py to subversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/table_utils.py to table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_path.py to tst_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_version.py to tst_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/wingide.py to wingide.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/env_config.py to env_config.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/configure.py to configure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/make_library.py to make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_make_library.py to tst_make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/angle.py to angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/f000.py to f000.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maps.py to maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/super.py to super.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls.py to tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/refinement.py to refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/asa.py to asa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/clash.py to clash.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/find.py to find.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen.py to tst_add_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/build.py to build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/environment.py to environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/halides.py to halides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/identify.py to identify.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fem.py to fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/kick.py to kick.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/server.py to server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/output.py to output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/data.py to data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/group.py to group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/orca.py to orca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/targets.py to targets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights.py to weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absences.py to absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suites.py to suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/waters.py to waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/standard_geometry_cif.py to standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_standard_geometry_cif.py to tst_standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/arrays.py to arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/clashes.py to clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/msa.py to msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/proq2.py to proq2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/preferences.py to preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/scope.py to scope.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/create.py to create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/solver.py to solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/controls.py to controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/integration.py to integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/processing.py to processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/shared.py to shared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/functions.py to functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/householder.py to householder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/svd.py to svd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/besselk.py to besselk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/clustering.py to clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/distributions.py to distributions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/farey.py to farey.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/spe.py to spe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_utils.py to random_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/set.py to set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/vector.py to vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/single.py to single.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/fftpack.py to fftpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minimizers.py to minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minpack.py to minpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/simplex.py to simplex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/smoothing.py to smoothing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/time.py to time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/device.py to device.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/masks.py to masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_direction.py to test_direction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_disorder.py to test_disorder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_occupancies.py to test_occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_rigid.py to test_rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_same_group.py to test_same_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/conftest.py to conftest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/development.py to development.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache.py to apache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/exception.py to exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/blast.py to blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/app.py to app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/browser.py to browser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/icons.py to icons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/info_panels.py to info_panels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/layout.py to layout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/listeditor.py to listeditor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon.py to polygon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/process_control.py to process_control.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/windows.py to windows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-312.pyc running install_egg_info running egg_info creating cctbx.egg-info writing cctbx.egg-info/PKG-INFO writing dependency_links to cctbx.egg-info/dependency_links.txt writing requirements to cctbx.egg-info/requires.txt writing top-level names to cctbx.egg-info/top_level.txt writing manifest file 'cctbx.egg-info/SOURCES.txt' reading manifest file 'cctbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' writing manifest file 'cctbx.egg-info/SOURCES.txt' Copying cctbx.egg-info to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx-2023.12.egg-info Skipping SOURCES.txt running install_scripts # install the dxtbx python modules dh_auto_install --sourcedirectory=dxtbx install -m0755 -d /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 --dir dxtbx --dest-dir /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp' Found 21 dxtbx dispatchers Found 139 Format classes running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/pytest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/fastentrypoints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_direction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_disorder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_same_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/conftest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/development.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/overload.py to overload.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Format.py to Format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Registry.py to Registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/image.py to image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nexus.py to nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/beam.py to beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/compare.py to compare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/crystal.py to crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/profile.py to profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan.py to scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/filename.py to filename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/load.py to load.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/xds.py to xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/datablock.py to datablock.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache.py to filecache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/flumpy.py to flumpy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/frames.py to frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/api.py to api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/riso.py to riso.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/striping.py to striping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/components.py to components.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/graph.py to graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:777: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:792: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:793: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:812: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:831: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:860: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/application.py to application.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/worker.py to worker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/absorption.py to absorption.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark0.py to mark0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark1.py to mark1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark10.py to mark10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark3.py to mark3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/job.py to job.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/tag.py to tag.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/task.py to task.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/trial.py to trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/mp.py to mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/split_detector.py to split_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/isoform.py to isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/simulate.py to simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/python.py to python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/github.py to github.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/formula.py to formula.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/henke.py to henke.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/location_part.py to location_part.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/box.py to box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mem.py to mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/dev.py to dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/replay.py to replay.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/shelx.py to shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adptbx.py to adptbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/math_module.py to math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/multipolar.py to multipolar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_examples.py to run_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/translation_search.py to translation_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/watch_file.py to watch_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/split.py to split.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/equivalence.py to equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/intrinsics.py to intrinsics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tokenization.py to tokenization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout.py to tst_cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_read.py to tst_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/fonts.py to fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl.py to gl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/glu.py to glu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/images.py to images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/quadrics.py to quadrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/common.py to common.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/edf.py to edf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/mar.py to mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/noir.py to noir.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/npy.py to npy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/models.py to models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/download.py to download.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/records.py to records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py to utils.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:8: SyntaxWarning: invalid escape sequence '\{' /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/writer.py to writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/correction.py to correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xparm.py to xparm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_plots.py to data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/format.py to format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/logfiles.py to logfiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_manager.py to map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phases.py to phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/poscar.py to poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pymol.py to pymol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ranges.py to ranges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/symmetry.py to symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/wildcard.py to wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/help.py to help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install.py to install.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/scons.py to scons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/timers.py to timers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/interface.py to interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/parser.py to parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/pytest.py to pytest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/binary_search.py to binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/callbacks.py to callbacks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cli.py to cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/complex_math.py to complex_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/console_utils.py to console_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/containers.py to containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/dlite.py to dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_run.py to easy_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py to fastentrypoints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/introspection.py to introspection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/load_env.py to load_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/log.py to log.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/math_utils.py to math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/objgraph.py to objgraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_template.py to program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/progress.py to progress.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyframe.py to pyframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyplot.py to pyplot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/simplexml.py to simplexml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/smart_open.py to smart_open.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/str_utils.py to str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subversion.py to subversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/table_utils.py to table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_path.py to tst_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_version.py to tst_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/wingide.py to wingide.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/env_config.py to env_config.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/configure.py to configure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/make_library.py to make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_make_library.py to tst_make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/angle.py to angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/f000.py to f000.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maps.py to maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/super.py to super.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls.py to tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/refinement.py to refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/asa.py to asa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/clash.py to clash.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/find.py to find.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen.py to tst_add_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/build.py to build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/environment.py to environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/halides.py to halides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/identify.py to identify.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fem.py to fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/kick.py to kick.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/server.py to server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/output.py to output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/data.py to data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/group.py to group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/orca.py to orca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/targets.py to targets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights.py to weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absences.py to absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suites.py to suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/waters.py to waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/standard_geometry_cif.py to standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_standard_geometry_cif.py to tst_standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/arrays.py to arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/clashes.py to clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/msa.py to msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/proq2.py to proq2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/preferences.py to preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/scope.py to scope.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/create.py to create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/solver.py to solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/controls.py to controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/integration.py to integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/processing.py to processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/shared.py to shared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/functions.py to functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/householder.py to householder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/svd.py to svd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/besselk.py to besselk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/clustering.py to clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/distributions.py to distributions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/farey.py to farey.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/spe.py to spe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_utils.py to random_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/set.py to set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/vector.py to vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/single.py to single.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/fftpack.py to fftpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minimizers.py to minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minpack.py to minpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/simplex.py to simplex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/smoothing.py to smoothing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/time.py to time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/device.py to device.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/masks.py to masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_direction.py to test_direction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_disorder.py to test_disorder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_occupancies.py to test_occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_rigid.py to test_rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_same_group.py to test_same_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/conftest.py to conftest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/development.py to development.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache.py to apache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/exception.py to exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/blast.py to blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/app.py to app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/browser.py to browser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/icons.py to icons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/info_panels.py to info_panels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/layout.py to layout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/listeditor.py to listeditor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon.py to polygon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/process_control.py to process_control.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/windows.py to windows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-312.pyc running install_egg_info running egg_info writing src/dxtbx.egg-info/PKG-INFO writing dependency_links to src/dxtbx.egg-info/dependency_links.txt writing entry points to src/dxtbx.egg-info/entry_points.txt writing top-level names to src/dxtbx.egg-info/top_level.txt reading manifest file 'src/dxtbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' adding license file 'AUTHORS' writing manifest file 'src/dxtbx.egg-info/SOURCES.txt' Copying src/dxtbx.egg-info to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx-3.21.1.egg-info Skipping SOURCES.txt running install_scripts Installing cxi.image2pickle script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing cxi.image_average script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dev.dxtbx.debug_memory script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dev.dxtbx.read_sequence script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.any2nexus script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.depends_on script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.detector_superpose script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.display_parallax_correction script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.dlsnxs2cbf script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.image2pickle script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.image_average script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.install_format script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.overload script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.plot_detector_models script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.print_header script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.print_matching_images script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.radial_average script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.saturation script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.show_mask_info script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.show_matching_formats script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.show_registry script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin # specific installation for the cctbx build directory dh_auto_install -- -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" install -m0755 -d /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 -s custom "--install-args=debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" --dest-dir /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp I: pybuild base:311: debian/install-cctbx.sh -- --pyver=3.12 --srcdir=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 --builddir='/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' debian/install-cctbx.sh: line 7: 0: command not found --pyver '3.12' --srcdir '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' --builddir '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_' --modules 'annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' -- Intalling CCTBX into a FHS system Modules: annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx From the source /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 build /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_ To the FHS : pyver 3.12 bindir /usr/bin incdir /usr/include pkglibdir /usr/lib/cctbx/python3.12 libdir /usr/lib/aarch64-linux-gnu pythondir /usr/lib/python3.12/dist-packages Copying libtbx_env from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_ to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12 {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/spotfinder.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/serialtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/omptbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cma_es.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/annlib.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbflib.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/spotfinder.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/serialtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/omptbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cma_es.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/annlib.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbflib.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/spotfinder.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/serialtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.wait_for_file"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/wait_for_file.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.valgrind"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/valgrind.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.unpack_in_sources"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/unpack_in_sources.csh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.tcsh"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/tcsh.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.start_process"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/start_process.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.start_binary_bundle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/start_binary_bundle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/sphinx.build"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/sphinx_build.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_variable_names"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_variable_names.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_tests"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_tests.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_repository_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_repository_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_pythonpath"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_pythonpath.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_python_sys_executable"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_python_sys_executable.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_python_dependencies"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_python_dependencies.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_numpy_version"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_numpy_version.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_numeric_version"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_numeric_version.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_number_of_processors"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_number_of_processors.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_module_dependencies"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_module_dependencies.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_lib_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_lib_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_include_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_include_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_host_and_user"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_host_and_user.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_full_command_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_full_command_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_environ_usage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_environ_usage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_env"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_env.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_dist_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_date_and_time"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_date_and_time.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_commands"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_commands.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_but_no_repr"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_but_no_repr.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_build_options"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_options.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_bin_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_bin_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.show_all_on_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_all_on_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.sh"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/sh.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.sge_qstat_counts"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/sge_qstat_counts.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.sge_available_slots"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/sge_available_slots.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.seconds_since_the_epoch"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/seconds_since_the_epoch.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.scons"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/scons.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.run_tests_parallel"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/run_tests_parallel.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.run_pickled_function"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/run_pickled_function.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.resource_monitor_plot"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/resource_monitor_plot.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.remove_unused_imports"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/remove_unused_imports.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.remove_tree"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/remove_tree.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.remote_processing"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/remote_processing.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.refresh"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/refresh.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.raise_exception_for_testing"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/raise_exception_for_testing.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.py_compile_all"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/py_compile_all.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.printenv"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/printenv.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/prime_factors_of.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.phil"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/phil.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.pdflatex"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/pdflatex.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.path_utility"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/path_utility.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.parallel_simple"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/parallel_simple.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.nequal"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/nequal.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.make_sphinx_html"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/make_sphinx_html.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.make_dist"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/make_dist.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.list_source_files_sorted_by_size"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/list_source_files_sorted_by_size.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.list_modules"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/list_modules.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.list_files"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/list_files.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.line_count"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/line_count.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.latex"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/latex.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.install_conda"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/install_conda.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.install"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/install.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.import_all_python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/import_all_python.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.import_all_ext"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/import_all_ext.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.help"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/help.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.git_avoid_merges"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/git_avoid_merges.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.gdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/gdb.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_unused_imports_crude"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_unused_imports_crude.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_unused_imports"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_unused_imports.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_under_build"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_under_build.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_reserved_names"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_reserved_names.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_pdb_mmcif_problems"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_pdb_mmcif_problems.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_old_style_classes"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_old_style_classes.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_in_repositories"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_in_repositories.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_files"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_files.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_untested"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_untested.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.find_clutter"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/find_clutter.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.extract_code_from_txt"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/extract_code_from_txt.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.exec"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/exec.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.epydoc_run"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/epydoc_run.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.env_run"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/env_run.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.easy_qsub"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/easy_qsub.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.dtrace"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/dtrace.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.csh"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/csh.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_windows_exe"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_windows_exe.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_unzipsfx"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_unzipsfx.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_selfx"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_selfx.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_mac_app"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_mac_app.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_installer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_installer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_install_script_bat"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_install_script_bat.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.create_cctbx_bundle_for_installer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/create_cctbx_bundle_for_installer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.configure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/configure.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.clear_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/clear_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.clean_clutter"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/clean_clutter.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.chunk"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/chunk.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.check_libcpp"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/check_libcpp.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.bundle_as_selfx"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/bundle_as_selfx.csh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.bundle_as_exe"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/bundle_as_exe.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.bootstrap"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/bootstrap.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.bibtex"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/bibtex.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.bash"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/bash.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.assert_stdin_ends_with"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/assert_stdin_ends_with.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.assert_stdin_contains_strings"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/assert_stdin_contains_strings.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.assert_stdin_does_not_contain_strings"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/assert_stdin_contains_strings.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.assert_stdin"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/assert_stdin.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.assert_not_show_diff"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/assert_not_show_diff.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.assert_line_count"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/assert_line_count.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.any2unix"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/any2unix.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.analyse_code_comments"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/analyse_code_comments.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/libtbx.add_from_future_import_division"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/add_from_future_import_division.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.show_platform_info"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/show_platform_info.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.show_environ_usage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/show_environ_usage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.segmentation_fault"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/segmentation_fault.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.nested_cpp_loops_with_check_signals"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.lcm"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/lcm.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.int_overflow"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/int_overflow.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.inexact"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/inexact.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.gcd"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/gcd.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.double_overflow"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/double_overflow.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost_adaptbx.divide_by_zero"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx/command_line/divide_by_zero.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.split"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable/command_line/split.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.show_calls"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable/command_line/show_calls.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.read"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable/command_line/read.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.insert_write_at_start_of_each_procedure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable/command_line/insert_write_at_start_of_each_procedure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.fem_include_search_paths"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable/command_line/fem_include_search_paths.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.cout"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable/command_line/cout.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.unicode_examples"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx/command_line/unicode_examples.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_sizes"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx/command_line/show_sizes.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_exp_times"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx/command_line/show_exp_times.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.histogram"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx/command_line/histogram.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.generate_error_h"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx/command_line/generate_error_h.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.apply_tapenade_hints"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx/command_line/apply_tapenade_hints.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbf.dump"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cbflib_adaptbx/command_line/dump.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.wavelength_units"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/wavelength_units.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.web.install"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/web.install.csh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.version"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/version.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.subgroups"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/subgroups.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.structure_factor_timings"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/structure_factor_timings.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.space_group_info"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/space_group_info.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.segment_and_split_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/segment_and_split_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/samosa.scale"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/samosa_scale.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/samosa.join"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/samosa_join.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.development.qscore"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/qscore.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.precession_view"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/precession_view.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.form_factor_query"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/form_factor_query.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.find_reticular_twin_laws"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/find_reticular_twin_laws.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.euclidean_model_matching"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/euclidean_model_matching.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.eltbx.show_fp_fdp"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/eltbx.show_fp_fdp.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.diffuse"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/diffuse.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.cod_select_and_pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/cod_select_and_pickle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx_regression.test_nightly"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/cctbx_test_nightly.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.brehm_diederichs"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/brehm_diederichs.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.auto_sharpen"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx/command_line/auto_sharpen.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.visualize_r_factors"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/visualize_r_factors.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.qttbx.view_structure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/qttbx.view_structure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.multiplicity_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/multiplicity_viewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.model_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/model_viewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.make_install_HKLviewer_ChimeraX"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/make_install_HKLviewer_ChimeraX.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.data_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/hklview.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.data_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/hklview.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.compare_datasets"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/compare_datasets.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.HKLviewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/HKLviewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.HKLviewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/HKLviewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phasertng.HKLviewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/HKLviewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.HKLinfo"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/HKLinfo.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.HKLinfo"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d/command_line/HKLinfo.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.refine"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx/command_line/refine.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.masks"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx/command_line/masks.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.benchmark_refinement"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx/command_line/benchmark_refinement.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.anom_refine"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx/command_line/anom_refine.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.absolute_structure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx/command_line/absolute_structure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.xplor.map.show_summary"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/xplor.map.show_summary.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.unique_with_biomt"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/unique_with_biomt.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.unique_with_biomt"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/unique_with_biomt.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.symmetry_search"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/symmetry_search.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.split_data_cif"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/split_data_cif.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.sort_atoms"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/sort_atoms.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.simple_map_coefficients"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/simple_map_coefficients.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.show_systematic_absences"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/show_systematic_absences.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.show_distances"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/show_distances.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.shelx.dump_as_python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/shelx.dump_as_python.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.shelx.as_xray_structure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/shelx.as_xray_structure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.shelx.as_cif"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/shelx.as_cif.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.reindex"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/reindex.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.reflection_statistics"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/reflection_statistics.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.reflection_file_reader"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/reflection_file_reader.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.reflection_file_editor"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/reflection_file_editor.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.reflection_file_converter"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/reflection_file_converter.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.reflection_file_converter"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/reflection_file_converter.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.r_free_flags_completion_simple"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/r_free_flags_completion_simple.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.r_free_flags_as_cns"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/r_free_flags_as_cns.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.r_free_flags_accumulation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/r_free_flags_accumulation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.poscar_as_xray_structure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/poscar_as_xray_structure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.phil"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/phil.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.split_models"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_split_models.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.show_connectivity"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_show_connectivity.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb_remediator"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_remediator.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb_labels_diff"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_labels_diff.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb_labels_comparison"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_labels_comparison.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.get_citation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_get_citation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb_cif_conversion"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_cif_conversion.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb_as_fasta"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_as_fasta.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb_as_cif"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_as_cif.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.add_conformations"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb_add_conformations.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.superpose_centers_of_mass"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.superpose_centers_of_mass.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.superpose_atoms_by_name"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.superpose_atoms_by_name.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.print_sequence"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.print_sequence.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.link_as_geometry_restraints_edits"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.link_as_geometry_restraints_edits.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.join_fragment_files"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.join_fragment_files.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.insert_scale_records"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.insert_scale_records.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb.hierarchy"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.hierarchy.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.box_around_molecule"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.box_around_molecule.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb.b_factor_stats"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.b_factor_stats.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.as_xray_structure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/pdb.as_xray_structure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.patterson_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/patterson_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.mtz_as_cif"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/mtz_as_cif.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.mtz.dump"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/mtz.dump.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.mtz.dump"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/mtz.dump.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb.mtrix_reconstruction"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/mtrix_reconstruction.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.merging_statistics"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/merging_statistics.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.merging_statistics"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/merging_statistics.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.lattice_symmetry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/lattice_symmetry.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.get_pubmed_citation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/get_pubmed_citation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.french_wilson"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/french_wilson.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.french_wilson"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/french_wilson.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.pdb.flip_symmetric_amino_acids"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/flip_symmetric_amino_acids.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.file_reader"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/file_reader.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.export_scalepack_unmerged"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/export_scalepack_unmerged.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.explore_metric_symmetry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/explore_metric_symmetry.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.emma"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/emma.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.emma"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/emma.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.resolution"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/effective_resolution.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.dtrek.to_cns"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/dtrek.to_cns.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.distance_least_squares"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/distance_least_squares.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/labelit.png"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/detector_image_as_png.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.dano_as_amplitudes"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/dano_as_amplitudes.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.csv_as_mtz"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/csv_as_mtz.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.crystal_symmetry_from_any"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/crystal_symmetry_from_any.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cns.transfer_crystal_symmetry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cns.transfer_crystal_symmetry.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cns_as_mtz"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cns_as_mtz.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cns.sdb_reader"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cns.sdb_reader.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cns.reflection_reader"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cns.reflection_reader.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cif_as_pdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cif_as_pdb.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cif_as_pdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cif_as_pdb.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cif.validate"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cif.validate.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cif.as_xray_structure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cif.as_xray_structure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cif.as_miller_arrays"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cif.as_miller_arrays.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.build_phil_cache"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/build_phil_cache.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cbf_read"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/cbf_read.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.blast_pdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/blast_pdb.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb.biomt_reconstruction"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx/command_line/biomt_reconstruction.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.try_imports"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../gltbx/command_line/try_imports.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.xtriage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/xtriage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.xtriage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/xtriage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.xmanip"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/xmanip.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.development.water_b_factors"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/water_b_factors.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.verify_mon_lib_data"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/verify_mon_lib_data.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.validation_summary"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/validation_summary.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.development.validate_ligands"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/validate_ligands.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.validate_H"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/validate_H_cl_app.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.undowser2_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/undowser2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.undowser2_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/undowser2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.undowser2_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/undowser2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.undowser_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/undowser.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.undowser_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/undowser.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.tls_as_xyz"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/tls_as_xyz.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.tls_analysis"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/tls_analysis.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.tls"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/tls.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.table_one"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/table_one.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.superpose"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/superpose.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.super"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/super.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.suitename_old"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/suitename_old.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.suitename_old"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/suitename_old.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.suitename_old"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/suitename_old.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.suitename"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/suitename.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.suitename"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/suitename.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.suitename"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/suitename.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.ss_idealization"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/ss_idealization.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.sort_hetatms"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/sort_hetatms.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.sisa"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/sisa.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.show_r_factors_by_shell"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/show_r_factors_by_shell.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.select_best_starting_model"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/select_best_starting_model.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.secondary_structure_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/secondary_structure_validation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.secondary_structure_restraints"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/secondary_structure_restraints.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.search_pdb_symmetry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/search_pdb_symmetry.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rotalyze"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rotalyze.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.rotalyze"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rotalyze.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rna_validate_suites"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate_suites.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.rna_validate_suites"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate_suites.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rna_validate_puckers"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate_puckers.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.rna_validate_puckers"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate_puckers.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rna_validate_bonds"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate_bonds.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.rna_validate_bonds"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate_bonds.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rna_validate"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.rna_validate"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rna_validate.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.ringer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/ringer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.rigid_bond_test"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rigid_bond_test.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.ribbons"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/ribbons.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.remove_outliers"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/remove_outliers.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.refine_anomalous_substructure"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/refine_anomalous_substructure.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.reduce2"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/reduce2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.reciprocal_space_arrays"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/reciprocal_space_arrays.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.rebuild_rotarama_cache"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rebuild_rotarama_cache.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.rebuild_cablam_cache"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rebuild_cablam_cache.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.real_space_diff_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/real_space_diff_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.real_space_correlation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/real_space_correlation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rank_scale_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rank_scale_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.ramalyze"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/ramalyze.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.ramalyze"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/ramalyze.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.rama_z"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rama_z.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.rama_z"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/rama_z.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.r_factor_statistics"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/r_factor_statistics.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.quantum_interface"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/quantum_interface.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.prune_model"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/prune_model.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.process_predicted_model"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/process_predicted_model.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.process_predicted_model"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/process_predicted_model.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.probescore_ligand"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/probescore_ligand.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.probe2"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/probe2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.prepare_pdb_deposition"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/prepare_pdb_deposition.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.polder"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/polder.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.plan_sad_experiment"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.perigee"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/perigee.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdbtools"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/pdbtools.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb_interpretation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/pdb_interpretation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.pdb_interpretation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/pdb_interpretation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb_atom_selection"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/pdb_atom_selection.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.omegalyze"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/omegalyze.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.omegalyze"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/omegalyze.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.nonbonded_overlaps"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/nonbonded_overlaps.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.mtz2map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/mtz2map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fft"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/mtz2map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.fft"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/mtz2map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.mp_geo"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/mp_geo.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.mon_lib_cif_triage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/mon_lib_cif_triage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.molprobity"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/molprobity.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.molprobity"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/molprobity.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.models_as_chains"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/models_as_chains.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.model_vs_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/model_vs_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.model_vs_data"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/model_vs_data.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.model_model_distances"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/model_model_distances.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.model_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/model_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.model_idealization"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/model_idealization.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.maximum_entropy_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/maximum_entropy_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.matthews"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/matthews.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.massage_data"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/massage_data.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.mask"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/mask.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.maps"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/maps.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.map_to_structure_factors"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/map_to_structure_factors.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.map_to_model_histogram"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/map_to_model_histogram.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.map_comparison"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/map_comparison.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.map_box"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/map_box.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.kinemage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/kinemage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.kinemage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/kinemage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.hydrogenate"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/hydrogenate.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.holton_geometry_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/holton_geometry_validation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.holton_geometry_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/holton_geometry_validation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.helix_sheet_recs_as_pdb_files"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/helix_sheet_recs_as_pdb_files.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.hbond"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/hbond.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.grow_density"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/grow_density.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.geometry_minimization"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/geometry_minimization.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fobs_minus_fobs_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/fobs_minus_fobs_map.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fmodel"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/fmodel.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.find_tls_groups"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/find_tls_groups.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.find_residue_in_pdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/find_residue_in_pdb.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.find_peaks_holes"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/find_peaks_holes.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.find_peaks_holes"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/find_peaks_holes.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fetch_pdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/fetch_pdb.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.fetch_pdb"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/fetch_pdb.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fake_f_obs"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/fake_f_obs.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fab_elbow_angle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/fab_elbow_angle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.f000"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/f000.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.estimate_bijvoet_ratio"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/estimate_bijvoet_ratio.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.emringer_score"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/emringer_score.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.emringer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/emringer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.development.electrons"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/electrons.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.dynamics"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/dynamics.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.distance_difference"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/distance_difference.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.fem"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/development_fem.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.feature_enhanced_map"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/development_fem.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.development.aev"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/development.aev.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.density_modification"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/density_modification.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.comparama"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/comparama.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.clashscore2"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/clashscore2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.clashscore2"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/clashscore2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.clashscore2"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/clashscore2.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.clashscore"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/clashscore.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.clashscore"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/clashscore.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cif_as_mtz"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cif_as_mtz.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.cif_as_mtz"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cif_as_mtz.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.chiral_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/chiral_validation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.chiral_validation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/chiral_validation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cc_star"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cc_star.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cbetadev"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cbetadev.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.cbetadev"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cbetadev.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cablam_validate"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cablam_validate.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cablam_training"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cablam_training.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cablam_idealization"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cablam_idealization.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.cablam"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cablam.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.cablam"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/cablam.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.barbed_wire_analysis"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/barbed_wire_analysis.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/molprobity.barbed_wire_analysis"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/barbed_wire_analysis.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.arginine_geometry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/arginine_geometry.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.apply_ncs_to_ligand"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/apply_ncs_to_ligand.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.angle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/angle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.altloc_remediate"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx/command_line/altloc_remediate.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/distl.thin_client"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder/command_line/thin_client.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/distl.sweep_strength"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder/command_line/sweep_strength.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/distl.signal_strength"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder/command_line/signal_strength.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/distl.mp_spotfinder_server_read_file"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder/command_line/mp_spotfinder_server_read_file.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/distl.image_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder/command_line/image_viewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/distl.find_active_area"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder/command_line/find_active_area.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.image_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/viewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.image_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/slip_viewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.simage.wx_display"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/simage.wx_display.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.simage.solver"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/simage.solver.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.simage.explore_completeness"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/simage.explore_completeness.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.simage.create"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/simage.create.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.index"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/index.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.example_viewer"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx/command_line/example_viewer.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.xtriage_gui"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.wxpython"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/wxpython.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.xtriage"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.show_file_info"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/show_file_info.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.plot_anomalous_scattering"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/plot_anomalous_scattering.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.plan_sad_experiment"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.pdb_statistics"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/pdb_statistics.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/phenix.pdb_editor"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/pdb_editor.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.loggraph"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/loggraph.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.inspect_r_free_flags"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/inspect_r_free_flags.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.bfactor_plot"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/b_plot.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.anomalous_differences_histogram"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx/command_line/anomalous_differences_histogram.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_registry"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/show_registry.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_matching_formats"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/show_matching_formats.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.show_mask_info"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/show_mask_info.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.saturation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/saturation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dev.dxtbx.read_sequence"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/read_sequence.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.radial_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/radial_average.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.print_matching_images"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/print_matching_images.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.print_header"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/print_header.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.plot_detector_models"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/plot_detector_models.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.overload"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/overload.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.install_format"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/install_format.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.image_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cxi.image_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.image2pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/image2pickle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cxi.image2pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/image2pickle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.dlsnxs2cbf"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/dlsnxs2cbf.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.display_parallax_correction"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/display_parallax_correction.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.detector_superpose"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/detector_superpose.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.depends_on"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/depends_on.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dev.dxtbx.debug_memory"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/debug_memory.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.any2nexus"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src/dxtbx/command_line/any2nexus.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/omptbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cma_es.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/annlib.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbflib.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12")}, 'bin_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="exe"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="include"), 'installed': False, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'reduce', 'docutils', 'king', 'cbflib', 'probe'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../annlib"), 'annlib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../annlib_adaptbx"), 'boost': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost"), 'boost_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx"), 'chiltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../chiltbx"), 'cma_es': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cma_es"), 'crys3d': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d"), 'dxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx"), 'fable': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable"), 'gltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../gltbx"), 'iotbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx"), 'libtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx"), 'mmtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx"), 'omptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../omptbx"), 'rstbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx"), 'scitbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx"), 'serialtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../serialtbx"), 'smtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx"), 'spotfinder': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder"), 'tbxx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../tbxx"), 'ucif': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ucif"), 'wxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': False, 'path_utility': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), 'python_version_major_minor': (3, 12), 'pythonpath': [relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../.."), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="lib"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/lib/python3.12/dist-packages"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/lib/python3/dist-packages"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/local/lib/python3.12/dist-packages")], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../..")], 'scons_dist_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr")} Saved /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12/libtbx_env env {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.explore_completeness"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.explore_completeness.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.mp_spotfinder_server_read_file"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.plan_sad_experiment"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/slip_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.solver"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.solver.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.sweep_strength"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/sweep_strength.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.xtriage_gui"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/image_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.thin_client"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/thin_client.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.loggraph"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/loggraph.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.altloc_remediate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/altloc_remediate.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.apply_ncs_to_ligand"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.wxpython"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/wxpython.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.wx_display"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.wx_display.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.xtriage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.create"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.create.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.index"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/index.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.example_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/example_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.inspect_r_free_flags"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/inspect_r_free_flags.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.pdb_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/pdb_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_editor"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/pdb_editor.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_file_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/show_file_info.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.plot_anomalous_scattering"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.arginine_geometry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/arginine_geometry.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.barbed_wire_analysis"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/barbed_wire_analysis.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.barbed_wire_analysis"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/barbed_wire_analysis.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.angle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/angle.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.signal_strength"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/signal_strength.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.find_active_area"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/find_active_area.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.cablam"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cablam.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cablam"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cablam.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cablam_idealization"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cablam_idealization.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cablam_training"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cablam_training.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cablam_validate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cablam_validate.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.cbetadev"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cbetadev.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cbetadev"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cbetadev.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cc_star"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cc_star.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.chiral_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/chiral_validation.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.chiral_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/chiral_validation.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cif_as_mtz"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cif_as_mtz.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cif_as_mtz"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/cif_as_mtz.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.clashscore"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.clashscore"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.clashscore2"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore2.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.clashscore2"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore2.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.clashscore2"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/clashscore2.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.comparama"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/comparama.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.density_modification"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/density_modification.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.aev"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/development.aev.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.feature_enhanced_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/development_fem.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fem"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/development_fem.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.distance_difference"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/distance_difference.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.dynamics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/dynamics.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.electrons"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/electrons.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.emringer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/emringer.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.emringer_score"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/emringer_score.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.estimate_bijvoet_ratio"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.f000"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/f000.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fab_elbow_angle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fab_elbow_angle.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fake_f_obs"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fake_f_obs.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.fetch_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fetch_pdb.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fetch_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fetch_pdb.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.find_peaks_holes"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/find_peaks_holes.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.find_peaks_holes"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/find_peaks_holes.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.find_residue_in_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/find_residue_in_pdb.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.find_tls_groups"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/find_tls_groups.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.helix_sheet_recs_as_pdb_files"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.holton_geometry_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/holton_geometry_validation.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fmodel"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fmodel.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fobs_minus_fobs_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.geometry_minimization"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/geometry_minimization.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.grow_density"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/grow_density.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.hbond"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/hbond.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.holton_geometry_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/holton_geometry_validation.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.hydrogenate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/hydrogenate.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.kinemage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/kinemage.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.kinemage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/kinemage.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.map_box"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/map_box.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.map_comparison"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/map_comparison.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.map_to_model_histogram"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/map_to_model_histogram.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.map_to_structure_factors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/map_to_structure_factors.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.maps"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/maps.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.mask"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mask.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.massage_data"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/massage_data.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.matthews"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/matthews.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.maximum_entropy_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/maximum_entropy_map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.model_idealization"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_idealization.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.model_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.model_model_distances"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_model_distances.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.model_vs_data"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_vs_data.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.model_vs_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/model_vs_map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.models_as_chains"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/models_as_chains.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.molprobity"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/molprobity.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.molprobity"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/molprobity.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.mon_lib_cif_triage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.mp_geo"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mp_geo.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.fft"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mtz2map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.fft"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mtz2map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.mtz2map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/mtz2map.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.nonbonded_overlaps"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/nonbonded_overlaps.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.omegalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/omegalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.omegalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/omegalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_atom_selection"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/pdb_atom_selection.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.pdb_interpretation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdbtools"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/pdbtools.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.perigee"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/perigee.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.plan_sad_experiment"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.polder"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/polder.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.prepare_pdb_deposition"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.probe2"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/probe2.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.probescore_ligand"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/probescore_ligand.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.process_predicted_model"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/process_predicted_model.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.process_predicted_model"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/process_predicted_model.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.prune_model"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/prune_model.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.quantum_interface"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/quantum_interface.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.r_factor_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/r_factor_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rama_z"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rama_z.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.rama_z"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rama_z.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.ramalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/ramalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.ramalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/ramalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rank_scale_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rank_scale_map.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.real_space_correlation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/real_space_correlation.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.real_space_diff_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/real_space_diff_map.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.rebuild_cablam_cache"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.rebuild_rotarama_cache"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.reciprocal_space_arrays"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.reduce2"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/reduce2.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.refine_anomalous_substructure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.remove_outliers"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/remove_outliers.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.ringer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/ringer.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.ribbons"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/ribbons.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.rigid_bond_test"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rigid_bond_test.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.rna_validate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rna_validate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.rna_validate_bonds"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate_bonds.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rna_validate_bonds"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate_bonds.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.rna_validate_puckers"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate_puckers.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rna_validate_puckers"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate_puckers.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.rna_validate_suites"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate_suites.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rna_validate_suites"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rna_validate_suites.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.rotalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rotalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.rotalyze"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/rotalyze.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.search_pdb_symmetry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/search_pdb_symmetry.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.secondary_structure_restraints"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/secondary_structure_restraints.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.secondary_structure_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/secondary_structure_validation.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.select_best_starting_model"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/select_best_starting_model.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.show_r_factors_by_shell"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.sisa"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/sisa.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.sort_hetatms"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/sort_hetatms.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.ss_idealization"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/ss_idealization.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.suitename"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/suitename.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.suitename"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/suitename.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.suitename"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/suitename.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.suitename_old"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/suitename_old.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.suitename_old"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/suitename_old.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.suitename_old"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/suitename_old.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.super"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/super.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.superpose"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/superpose.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.table_one"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/table_one.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.tls"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/tls.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.tls_analysis"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/tls_analysis.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.tls_as_xyz"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/tls_as_xyz.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.undowser_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.undowser_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser.py"), relocatable_path(anchor="/usr", relocatable="bin/molprobity.undowser2_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser2.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.undowser2_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser2.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.undowser2_validation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/undowser2.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.validate_H"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/validate_H_cl_app.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.validate_ligands"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/validate_ligands.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.validation_summary"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/validation_summary.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.verify_mon_lib_data"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/verify_mon_lib_data.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.water_b_factors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/water_b_factors.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.xmanip"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/xmanip.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.xtriage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.xtriage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/gltbx.try_imports"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/gltbx/command_line/try_imports.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb.biomt_reconstruction"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/biomt_reconstruction.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.blast_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/blast_pdb.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.build_phil_cache"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/build_phil_cache.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cif.as_miller_arrays"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cif.as_miller_arrays.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cbf_read"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cbf_read.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cif.as_xray_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cif.as_xray_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cif.validate"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cif.validate.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cif_as_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cif_as_pdb.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cif_as_pdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cif_as_pdb.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cns.reflection_reader"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cns.reflection_reader.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cns.sdb_reader"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cns.sdb_reader.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.cns.transfer_crystal_symmetry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.crystal_symmetry_from_any"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.cns_as_mtz"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/cns_as_mtz.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.csv_as_mtz"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/csv_as_mtz.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.dano_as_amplitudes"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/dano_as_amplitudes.py"), relocatable_path(anchor="/usr", relocatable="bin/labelit.png"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/detector_image_as_png.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.distance_least_squares"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/distance_least_squares.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.dtrek.to_cns"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/dtrek.to_cns.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.resolution"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/effective_resolution.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.emma"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/emma.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.emma"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/emma.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.explore_metric_symmetry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/explore_metric_symmetry.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.export_scalepack_unmerged"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/export_scalepack_unmerged.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.file_reader"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/file_reader.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.flip_symmetric_amino_acids"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.french_wilson"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/french_wilson.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.french_wilson"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/french_wilson.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.get_pubmed_citation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/get_pubmed_citation.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.lattice_symmetry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/lattice_symmetry.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.merging_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/merging_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.merging_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/merging_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb.mtrix_reconstruction"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/mtrix_reconstruction.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.mtz.dump"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/mtz.dump.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.mtz.dump"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/mtz.dump.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.mtz_as_cif"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/mtz_as_cif.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.patterson_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/patterson_map.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.as_xray_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.as_xray_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb.b_factor_stats"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.b_factor_stats.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.box_around_molecule"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.box_around_molecule.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb.hierarchy"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.hierarchy.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.insert_scale_records"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.insert_scale_records.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.join_fragment_files"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.join_fragment_files.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.link_as_geometry_restraints_edits"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.print_sequence"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.print_sequence.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.superpose_atoms_by_name"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.superpose_centers_of_mass"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.add_conformations"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_add_conformations.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_as_cif"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_as_cif.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb_as_fasta"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_as_fasta.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_cif_conversion"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_cif_conversion.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.get_citation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_get_citation.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb_labels_comparison"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_labels_comparison.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb_labels_diff"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_labels_diff.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb_remediator"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_remediator.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.show_connectivity"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_show_connectivity.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.split_models"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/pdb_split_models.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.phil"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/phil.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.r_free_flags_as_cns"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/r_free_flags_as_cns.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.poscar_as_xray_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/poscar_as_xray_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.r_free_flags_accumulation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/r_free_flags_accumulation.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.r_free_flags_completion_simple"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.reflection_file_converter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/reflection_file_converter.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.reflection_file_converter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/reflection_file_converter.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.reflection_file_editor"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/reflection_file_editor.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.reflection_file_reader"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/reflection_file_reader.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.reflection_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/reflection_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.shelx.as_xray_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/shelx.as_xray_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.reindex"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/reindex.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.shelx.as_cif"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/shelx.as_cif.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.shelx.dump_as_python"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/shelx.dump_as_python.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.show_distances"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/show_distances.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.show_systematic_absences"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/show_systematic_absences.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.simple_map_coefficients"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/simple_map_coefficients.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.pdb.sort_atoms"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/sort_atoms.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.split_data_cif"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/split_data_cif.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.symmetry_search"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/symmetry_search.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.unique_with_biomt"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/unique_with_biomt.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.unique_with_biomt"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/unique_with_biomt.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.xplor.map.show_summary"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx/command_line/xplor.map.show_summary.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.absolute_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/absolute_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.anom_refine"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/anom_refine.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.benchmark_refinement"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/benchmark_refinement.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.masks"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/masks.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.refine"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx/command_line/refine.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.HKLinfo"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/HKLinfo.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.HKLinfo"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/HKLinfo.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.HKLviewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/HKLviewer.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.HKLviewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/HKLviewer.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.compare_datasets"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/compare_datasets.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.data_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/hklview.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.data_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/hklview.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.make_install_HKLviewer_ChimeraX"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py"), relocatable_path(anchor="/usr", relocatable="bin/crys3d.model_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/model_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.multiplicity_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/multiplicity_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/crys3d.qttbx.view_structure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/qttbx.view_structure.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.visualize_r_factors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/visualize_r_factors.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.auto_sharpen"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/auto_sharpen.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.brehm_diederichs"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/brehm_diederichs.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx_regression.test_nightly"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/cctbx_test_nightly.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.cod_select_and_pickle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/cod_select_and_pickle.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.diffuse"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/diffuse.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.eltbx.show_fp_fdp"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.euclidean_model_matching"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/euclidean_model_matching.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.find_reticular_twin_laws"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/find_reticular_twin_laws.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.form_factor_query"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/form_factor_query.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.precession_view"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/precession_view.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.development.qscore"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/qscore.py"), relocatable_path(anchor="/usr", relocatable="bin/samosa.join"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/samosa_join.py"), relocatable_path(anchor="/usr", relocatable="bin/samosa.scale"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/samosa_scale.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.segment_and_split_map"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/segment_and_split_map.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.space_group_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/space_group_info.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.structure_factor_timings"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/structure_factor_timings.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.subgroups"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/subgroups.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.version"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/version.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.wavelength_units"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/wavelength_units.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.web.install"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx/command_line/web.install.csh"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.apply_tapenade_hints"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx/command_line/apply_tapenade_hints.py"), relocatable_path(anchor="/usr", relocatable="bin/cbf.dump"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cbflib_adaptbx/command_line/dump.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.generate_error_h"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx/command_line/generate_error_h.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.histogram"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx/command_line/histogram.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.show_exp_times"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx/command_line/show_exp_times.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.show_sizes"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx/command_line/show_sizes.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.unicode_examples"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx/command_line/unicode_examples.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.cout"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable/command_line/cout.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.fem_include_search_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable/command_line/fem_include_search_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.insert_write_at_start_of_each_procedure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.read"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable/command_line/read.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.show_calls"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable/command_line/show_calls.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.split"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable/command_line/split.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.divide_by_zero"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/divide_by_zero.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.double_overflow"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/double_overflow.py"), relocatable_path(anchor="/usr", relocatable="bin/boost.gcd"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/gcd.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.inexact"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/inexact.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.int_overflow"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/int_overflow.py"), relocatable_path(anchor="/usr", relocatable="bin/boost.lcm"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/lcm.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.nested_cpp_loops_with_check_signals"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.segmentation_fault"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/segmentation_fault.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.show_environ_usage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/show_environ_usage.py"), relocatable_path(anchor="/usr", relocatable="bin/boost_adaptbx.show_platform_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx/command_line/show_platform_info.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.add_from_future_import_division"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/add_from_future_import_division.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.analyse_code_comments"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/analyse_code_comments.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.any2unix"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/any2unix.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_line_count"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_line_count.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_not_show_diff"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_not_show_diff.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin_does_not_contain_strings"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin_contains_strings"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.assert_stdin_ends_with"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/assert_stdin_ends_with.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bash"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bash.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bibtex"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bibtex.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bootstrap"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bootstrap.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bundle_as_exe"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bundle_as_exe.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.bundle_as_selfx"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/bundle_as_selfx.csh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.check_libcpp"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/check_libcpp.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.chunk"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/chunk.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.clean_clutter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/clean_clutter.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.clear_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/clear_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.configure"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/configure.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_cctbx_bundle_for_installer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_install_script_bat"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_install_script_bat.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_installer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_installer.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_mac_app"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_mac_app.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_selfx"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_selfx.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_unzipsfx"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_unzipsfx.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.create_windows_exe"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/create_windows_exe.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.csh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/csh.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.dtrace"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/dtrace.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.easy_qsub"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/easy_qsub.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.env_run"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/env_run.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.epydoc_run"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/epydoc_run.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.exec"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/exec.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.extract_code_from_txt"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/extract_code_from_txt.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_clutter"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_clutter.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_files"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_files.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_in_repositories"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_in_repositories.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_pdb_mmcif_problems"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_reserved_names"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_reserved_names.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_under_build"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_under_build.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_untested"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_untested.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_unused_imports"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_unused_imports.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_unused_imports_crude"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_unused_imports_crude.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.find_old_style_classes"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/find_old_style_classes.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.gdb"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/gdb.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.git_avoid_merges"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/git_avoid_merges.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.help"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/help.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.import_all_ext"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/import_all_ext.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.import_all_python"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/import_all_python.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.install"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/install.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.install_conda"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/install_conda.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.latex"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/latex.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.line_count"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/line_count.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_files"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_files.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_modules"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_modules.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.list_source_files_sorted_by_size"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.make_dist"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/make_dist.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.make_sphinx_html"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/make_sphinx_html.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.nequal"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/nequal.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.parallel_simple"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/parallel_simple.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.path_utility"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.pdflatex"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/pdflatex.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.phil"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/phil.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.prime_factors_of"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/prime_factors_of.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.printenv"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/printenv.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.py_compile_all"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/py_compile_all.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.raise_exception_for_testing"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/raise_exception_for_testing.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.refresh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/refresh.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.remote_processing"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remote_processing.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.remove_tree"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remove_tree.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.remove_unused_imports"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/remove_unused_imports.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.resource_monitor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/resource_monitor_plot.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.run_pickled_function"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/run_pickled_function.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.run_tests_parallel"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/run_tests_parallel.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.scons"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/scons.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.seconds_since_the_epoch"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/seconds_since_the_epoch.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.sge_available_slots"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sge_available_slots.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.sge_qstat_counts"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sge_qstat_counts.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.sh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sh.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_all_on_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_all_on_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_bin_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_bin_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_build_options"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_options.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_repository_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_repository_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_python_dependencies"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_python_dependencies.py"), relocatable_path(anchor="/usr", relocatable="bin/sphinx.build"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/sphinx_build.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_numpy_version"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_numpy_version.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_tests"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_tests.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_lib_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_lib_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_include_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_include_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.start_binary_bundle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/start_binary_bundle.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_environ_usage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_environ_usage.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_date_and_time"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_date_and_time.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.valgrind"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/valgrind.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_pythonpath"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_pythonpath.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.start_process"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/start_process.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_numeric_version"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_numeric_version.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.wait_for_file"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/wait_for_file.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_module_dependencies"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_module_dependencies.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.tcsh"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/tcsh.sh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_number_of_processors"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_number_of_processors.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_but_no_repr"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_but_no_repr.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_full_command_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_full_command_path.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_env"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_env.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.unpack_in_sources"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/unpack_in_sources.csh"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_variable_names"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_variable_names.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_host_and_user"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_host_and_user.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_commands"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_commands.py"), relocatable_path(anchor="/usr", relocatable="bin/phasertng.HKLviewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d/command_line/HKLviewer.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.show_python_sys_executable"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_python_sys_executable.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/omptbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/serialtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/spotfinder.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/gltbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/crys3d.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/ccp4io.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/cbflib.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/annlib.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/fable.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/cma_es.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/omptbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/boost.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.any2nexus"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/any2nexus.py"), relocatable_path(anchor="/usr", relocatable="bin/dev.dxtbx.debug_memory"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/debug_memory.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.depends_on"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/depends_on.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.detector_superpose"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/detector_superpose.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.display_parallax_correction"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/display_parallax_correction.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.dlsnxs2cbf"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/dlsnxs2cbf.py"), relocatable_path(anchor="/usr", relocatable="bin/cxi.image2pickle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image2pickle.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.image2pickle"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image2pickle.py"), relocatable_path(anchor="/usr", relocatable="bin/cxi.image_average"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.image_average"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.overload"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/overload.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.install_format"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/install_format.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/serialtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/spotfinder.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/gltbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/crys3d.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/ccp4io.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/cbflib.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/annlib.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/cma_es.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/omptbx.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/boost.show_dist_paths"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_dist_paths.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/serialtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/spotfinder.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/gltbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/iotbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/smtbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/crys3d.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/ccp4io.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/cbflib.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/annlib.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/scitbx.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/cma_es.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/fable.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/boost.show_build_path"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.print_matching_images"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_matching_images.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.print_header"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_header.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.radial_average"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/radial_average.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_mask_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_mask_info.py"), relocatable_path(anchor="/usr", relocatable="bin/dev.dxtbx.read_sequence"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/read_sequence.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.plot_detector_models"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/plot_detector_models.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.bfactor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/b_plot.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.anomalous_differences_histogram"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_registry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_registry.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_matching_formats"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_matching_formats.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.saturation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/saturation.py"), relocatable_path(anchor="/usr", relocatable="bin/libtbx.python"): relocatable_path(anchor="/usr", relocatable="bin/python3.12"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_interpretation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py")}, 'bin_path': relocatable_path(anchor="/usr", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/usr/lib/cctbx/python3.12"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/usr", relocatable="bin"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/usr", relocatable="include"), 'installed': True, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/usr", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'reduce', 'docutils', 'king', 'cbflib', 'probe'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib"), 'annlib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib_adaptbx"), 'boost': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost"), 'boost_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx"), 'chiltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/chiltbx"), 'cma_es': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cma_es"), 'crys3d': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d"), 'dxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx"), 'fable': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable"), 'gltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/gltbx"), 'iotbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx"), 'libtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx"), 'mmtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx"), 'omptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/omptbx"), 'rstbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx"), 'scitbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx"), 'serialtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/serialtbx"), 'smtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx"), 'spotfinder': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder"), 'tbxx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/tbxx"), 'ucif': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ucif"), 'wxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': True, 'path_utility': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/usr", relocatable="bin/python3.12"), 'python_version_major_minor': (3, 12), 'pythonpath': [], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages")], 'scons_dist_path': relocatable_path(anchor="/usr", relocatable=".")} building file list ... done ./ boost_adaptbx/ boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy iotbx/ iotbx/pdb/ iotbx/pdb/hybrid_36_fem scitbx/ scitbx/array_family/ scitbx/array_family/tst_accessors scitbx/array_family/tst_af_1 scitbx/array_family/tst_af_2 scitbx/array_family/tst_af_3 scitbx/array_family/tst_af_4 scitbx/array_family/tst_af_5 scitbx/array_family/tst_mat3 scitbx/array_family/tst_optional_copy scitbx/array_family/tst_rectangular_full_packed scitbx/array_family/tst_ref_matrix_facet scitbx/array_family/tst_sym_mat3 scitbx/array_family/tst_unsigned_float_arithmetic scitbx/array_family/tst_vec3 scitbx/error/ scitbx/error/tst_error scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky scitbx/matrix/tests/tst_givens scitbx/matrix/tests/tst_householder scitbx/matrix/tests/tst_svd scitbx/serialization/ scitbx/serialization/tst_base_256 smtbx/ smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens smtbx/refinement/constraints/tests/tst_reparametrisation smtbx/refinement/constraints/tests/tst_special_position sent 17,020,215 bytes received 568 bytes 6,808,313.20 bytes/sec total size is 17,008,432 speedup is 1.00 building file list ... done ./ libann_adaptor.so -> libann_adaptor.so.0.0.1 libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 libann_adaptor.so.0.0.1 libasymmetric_map.so -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0.0.1 libcbf-private.so -> libcbf-private.so.0.0.1 libcbf-private.so.0 -> libcbf-private.so.0.0.1 libcbf-private.so.0.0.1 libccp4io.so -> libccp4io.so.0.0.1 libccp4io.so.0 -> libccp4io.so.0.0.1 libccp4io.so.0.0.1 libcctbx.so -> libcctbx.so.0.0.1 libcctbx.so.0 -> libcctbx.so.0.0.1 libcctbx.so.0.0.1 libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0.0.1 libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0.0.1 libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0.0.1 libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0.0.1 libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0.0.1 libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0.0.1 libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0.0.1 libomptbx.so -> libomptbx.so.0.0.1 libomptbx.so.0 -> libomptbx.so.0.0.1 libomptbx.so.0.0.1 librstbx.so -> librstbx.so.0.0.1 librstbx.so.0 -> librstbx.so.0.0.1 librstbx.so.0.0.1 libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0.0.1 libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0.0.1 libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0.0.1 libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0.0.1 libspotfinder.so -> libspotfinder.so.0.0.1 libspotfinder.so.0 -> libspotfinder.so.0.0.1 libspotfinder.so.0.0.1 sent 58,255,915 bytes received 494 bytes 6,132,253.58 bytes/sec total size is 58,239,378 speedup is 1.00 building file list ... done annlib_adaptbx/ annlib_adaptbx/ann_adaptor.h sent 2,234 bytes received 38 bytes 4,544.00 bytes/sec total size is 2,068 speedup is 0.91 building file list ... done boost_adaptbx/ boost_adaptbx/boost_range_python.hpp boost_adaptbx/convertible.h boost_adaptbx/exporting.hpp boost_adaptbx/floating_point_exceptions.h boost_adaptbx/hash.h boost_adaptbx/iterator_range.h boost_adaptbx/optional_conversions.h boost_adaptbx/precompiled.h boost_adaptbx/python_streambuf.h boost_adaptbx/std_pair_conversion.h boost_adaptbx/std_pair_fwd.h boost_adaptbx/swig_arg.hpp boost_adaptbx/tuple_conversion.h boost_adaptbx/graph/ boost_adaptbx/graph/graph_export_adaptor.hpp boost_adaptbx/graph/graph_type.hpp boost_adaptbx/graph/maximum_clique_greedy.hpp boost_adaptbx/graph/maximum_clique_rascal.hpp boost_adaptbx/graph/vertex_map.hpp boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy.h sent 73,852 bytes received 386 bytes 148,476.00 bytes/sec total size is 72,301 speedup is 0.97 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/basic.h cbflib_adaptbx/detectors/buffer_based_service.h cbflib_adaptbx/detectors/cbf_adaptor.h cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h cbflib_adaptbx/detectors/mar_adaptor.h cbflib_adaptbx/detectors/boost_python/ cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h cbflib_adaptbx/detectors/boost_python/general_cbf_write.h sent 22,315 bytes received 158 bytes 44,946.00 bytes/sec total size is 21,627 speedup is 0.96 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/ccp4_ccplib_fem.hpp ccp4io_adaptbx/ccp4_diskio_fem.hpp ccp4io_adaptbx/ccp4_fftlib_fem.hpp ccp4io_adaptbx/ccp4_library_fem.hpp ccp4io_adaptbx/ccp4_maplib_fem.hpp ccp4io_adaptbx/ccp4_mtzlib_fem.hpp ccp4io_adaptbx/ccp4_other_fem.hpp ccp4io_adaptbx/ccp4_parser_f.h ccp4io_adaptbx/ccp4_parser_fem.hpp ccp4io_adaptbx/ccp4_symlib_fem.hpp ccp4io_adaptbx/cmaplib_f.h ccp4io_adaptbx/cmtzlib_f.h ccp4io_adaptbx/csymlib_f.h ccp4io_adaptbx/library_f.h ccp4io_adaptbx/printf_wrappers.h ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/fftlib.hpp sent 87,916 bytes received 326 bytes 176,484.00 bytes/sec total size is 86,683 speedup is 0.98 building file list ... done cctbx/ cctbx/adptbx.h cctbx/anharmonic.h cctbx/coordinates.h cctbx/crystal_orientation.h cctbx/cumulative_intensity_distribution.h cctbx/error.h cctbx/french_wilson.h cctbx/hendrickson_lattman.h cctbx/import_scitbx_af.h cctbx/miller.h cctbx/restraints.h cctbx/tagged_value.h cctbx/uctbx.h cctbx/adp_restraints/ cctbx/adp_restraints/adp_restraints.h cctbx/adp_restraints/adp_similarity.h cctbx/adp_restraints/aniso_restraints.h cctbx/adp_restraints/fixed_u_eq_adp.h cctbx/adp_restraints/isotropic_adp.h cctbx/adp_restraints/rigid_bond.h cctbx/adp_restraints/rigu.h cctbx/adptbx/ cctbx/adptbx/hirshfeld.h cctbx/covariance/ cctbx/covariance/covariance.h cctbx/crystal/ cctbx/crystal/asu_clusters.h cctbx/crystal/close_packing.h cctbx/crystal/coordination_sequences.h cctbx/crystal/direct_space_asu.h cctbx/crystal/incremental_pairs.h cctbx/crystal/namespace.h cctbx/crystal/neighbors_fast.h cctbx/crystal/neighbors_simple.h cctbx/crystal/pair_tables.h cctbx/crystal/site_cluster_analysis.h cctbx/crystal/symmetry.h cctbx/crystal/workarounds_bpl.h cctbx/dmtbx/ cctbx/dmtbx/triplet_generator.h cctbx/dmtbx/triplet_phase_relation.h cctbx/eltbx/ cctbx/eltbx/attenuation_coefficient.h cctbx/eltbx/basic.h cctbx/eltbx/chemical_elements.h cctbx/eltbx/covalent_radii.h cctbx/eltbx/electron_scattering.h cctbx/eltbx/fp_fdp.h cctbx/eltbx/henke.h cctbx/eltbx/icsd_radii.h cctbx/eltbx/neutron.h cctbx/eltbx/sasaki.h cctbx/eltbx/tiny_pse.h cctbx/eltbx/wavelengths.h cctbx/eltbx/xray_scattering.h cctbx/eltbx/xray_scattering/ cctbx/eltbx/xray_scattering/form_factor.h cctbx/eltbx/xray_scattering/gaussian.h cctbx/eltbx/xray_scattering/n_gaussian.h cctbx/eltbx/xray_scattering/n_gaussian_raw.h cctbx/examples/ cctbx/examples/merging/ cctbx/examples/merging/postrefine_base.h cctbx/examples/merging/xscale_prototype_core.h cctbx/geometry/ cctbx/geometry/geometry.h cctbx/geometry_restraints/ cctbx/geometry_restraints/angle.h cctbx/geometry_restraints/asu_cache.h cctbx/geometry_restraints/bond.h cctbx/geometry_restraints/bond_misc.h cctbx/geometry_restraints/bond_similarity.h cctbx/geometry_restraints/bond_sorted.h cctbx/geometry_restraints/chirality.h cctbx/geometry_restraints/dihedral.h cctbx/geometry_restraints/motif.h cctbx/geometry_restraints/namespace.h cctbx/geometry_restraints/nonbonded.h cctbx/geometry_restraints/nonbonded_sorted.h cctbx/geometry_restraints/parallelity.h cctbx/geometry_restraints/planarity.h cctbx/geometry_restraints/proxy_select.h cctbx/geometry_restraints/shared_wrapper_pickle.hpp cctbx/geometry_restraints/sorted_asu_proxies.h cctbx/geometry_restraints/utils.h cctbx/maptbx/ cctbx/maptbx/asymmetric_map.h cctbx/maptbx/average_densities.h cctbx/maptbx/connectivity.h cctbx/maptbx/coordinate_transformers.h cctbx/maptbx/copy.h cctbx/maptbx/fft.h cctbx/maptbx/fsc.h cctbx/maptbx/ft_analytical_1d_point_scatterer_at_origin.h cctbx/maptbx/grid_indices_around_sites.h cctbx/maptbx/grid_tags.h cctbx/maptbx/gridding.h cctbx/maptbx/histogram.h cctbx/maptbx/interpolation.h cctbx/maptbx/loft.h cctbx/maptbx/map_accumulator.h cctbx/maptbx/marked_grid_points.h cctbx/maptbx/mask.h cctbx/maptbx/mask_utils.h cctbx/maptbx/namespace.h cctbx/maptbx/peak_search.h cctbx/maptbx/resolution.h cctbx/maptbx/skeletons.h cctbx/maptbx/sphericity.h cctbx/maptbx/standard_deviations_around_sites.hpp cctbx/maptbx/statistics.h cctbx/maptbx/structure_factors.h cctbx/maptbx/target_and_gradients.h cctbx/maptbx/utils.h cctbx/maptbx/accessors/ cctbx/maptbx/accessors/c_grid_p1.h cctbx/maptbx/accessors/c_grid_padded_p1.h cctbx/maptbx/bcr/ cctbx/maptbx/bcr/bcr.h cctbx/masks/ cctbx/masks/around_atoms.h cctbx/masks/flood_fill.h cctbx/math/ cctbx/math/array_utils.h cctbx/math/cos_sin_table.h cctbx/math/loop_n_from_m.h cctbx/math/mod.h cctbx/miller/ cctbx/miller/amplitude_normalisation.h cctbx/miller/asu.h cctbx/miller/bins.h cctbx/miller/change_basis.h cctbx/miller/expand_to_p1.h cctbx/miller/f_calc_map.h cctbx/miller/index_generator.h cctbx/miller/index_span.h cctbx/miller/lookup_utils.h cctbx/miller/match.h cctbx/miller/match_bijvoet_mates.h cctbx/miller/match_indices.h cctbx/miller/match_multi_indices.h cctbx/miller/math.h cctbx/miller/merge_equivalents.h cctbx/miller/phase_integrator.h cctbx/miller/phase_transfer.h cctbx/miller/randomize_amplitude_and_phase.h cctbx/miller/slices.h cctbx/miller/sym_equiv.h cctbx/miller/union_of_indices.h cctbx/multipolar/ cctbx/multipolar/aspherical.h cctbx/sgtbx/ cctbx/sgtbx/basic.h cctbx/sgtbx/brick.h cctbx/sgtbx/change_of_basis_op.h cctbx/sgtbx/find_affine.h cctbx/sgtbx/group_codes.h cctbx/sgtbx/lattice_symmetry.h cctbx/sgtbx/lattice_tr.h cctbx/sgtbx/miller_ops.h cctbx/sgtbx/operator_from_axis_direction.h cctbx/sgtbx/parse_string.h cctbx/sgtbx/phase_info.h cctbx/sgtbx/reciprocal_space_asu.h cctbx/sgtbx/reciprocal_space_reference_asu.h cctbx/sgtbx/reference_settings.h cctbx/sgtbx/rot_mx.h cctbx/sgtbx/rot_mx_hash.h cctbx/sgtbx/rot_mx_info.h cctbx/sgtbx/rotation_matrices.h cctbx/sgtbx/row_echelon_solve.h cctbx/sgtbx/rt_mx.h cctbx/sgtbx/rt_mx_hash.h cctbx/sgtbx/search_symmetry.h cctbx/sgtbx/select_generators.h cctbx/sgtbx/seminvariant.h cctbx/sgtbx/site_constraints.h cctbx/sgtbx/site_symmetry.h cctbx/sgtbx/site_symmetry_table.h cctbx/sgtbx/smith_normal_form.h cctbx/sgtbx/space_group.h cctbx/sgtbx/space_group_hash.h cctbx/sgtbx/space_group_type.h cctbx/sgtbx/sym_equiv_sites.h cctbx/sgtbx/symbols.h cctbx/sgtbx/sys_abs_equiv.h cctbx/sgtbx/tensor_rank_2.h cctbx/sgtbx/tensors.h cctbx/sgtbx/tr_group.h cctbx/sgtbx/tr_group_hash.h cctbx/sgtbx/tr_vec.h cctbx/sgtbx/tr_vec_hash.h cctbx/sgtbx/utils.h cctbx/sgtbx/wyckoff.h cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h cctbx/sgtbx/direct_space_asu/proto/cut.h cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.h cctbx/sgtbx/direct_space_asu/proto/expressions.h cctbx/sgtbx/direct_space_asu/proto/facet_collection.h cctbx/sgtbx/direct_space_asu/proto/reference_table.h cctbx/sgtbx/direct_space_asu/proto/shortcuts.h cctbx/sgtbx/direct_space_asu/proto/small_vec_math.h cctbx/symmetry_search/ cctbx/symmetry_search/translation_refinement.h cctbx/translation_search/ cctbx/translation_search/fast_nv1995.h cctbx/translation_search/fast_terms.h cctbx/translation_search/namespace.h cctbx/translation_search/symmetry_flags.h cctbx/translation_search/fast_nv1995/ cctbx/translation_search/fast_nv1995/combinations.h cctbx/translation_search/fast_nv1995/intermediates.h cctbx/translation_search/fast_nv1995/summations.h cctbx/uctbx/ cctbx/uctbx/fast_minimum_reduction.h cctbx/uctbx/determine_unit_cell/ cctbx/uctbx/determine_unit_cell/NCDist.h cctbx/xray/ cctbx/xray/conversions.h cctbx/xray/curvatures_simple.h cctbx/xray/each_hkl_gradients_direct.h cctbx/xray/extinction.h cctbx/xray/f_model.h cctbx/xray/fast_gradients.h cctbx/xray/gradient_flags.h cctbx/xray/gradients_direct.h cctbx/xray/grouped_data.h cctbx/xray/hr_ht_cache.h cctbx/xray/minimization.h cctbx/xray/observations.h cctbx/xray/packing_order.h cctbx/xray/parameter_map.h cctbx/xray/sampled_model_density.h cctbx/xray/sampling_base.h cctbx/xray/sampling_loop.h cctbx/xray/scatterer.h cctbx/xray/scatterer_flags.h cctbx/xray/scatterer_utils.h cctbx/xray/scattering_type_registry.h cctbx/xray/sigmaa.h cctbx/xray/structure_factors_direct.h cctbx/xray/structure_factors_simple.h cctbx/xray/targets.h cctbx/xray/twin_component.h cctbx/xray/twin_targets.h cctbx/xray/targets/ cctbx/xray/targets/common_results.h cctbx/xray/targets/correlation.h cctbx/xray/targets/least_squares.h cctbx/xray/targets/mlf.h cctbx/xray/targets/mlhl.h cctbx/xray/targets/mli.h cctbx/xray/targets/shelxl_wght_ls.hpp sent 1,904,549 bytes received 4,420 bytes 3,817,938.00 bytes/sec total size is 1,887,892 speedup is 0.99 building file list ... done cma_es/ cma_es/cma/ cma_es/cma/cmaes.h cma_es/cma/cmaes_interface.h sent 6,888 bytes received 60 bytes 13,896.00 bytes/sec total size is 6,671 speedup is 0.96 building file list ... done sent 198 bytes received 12 bytes 420.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done dxtbx/ dxtbx/error.h dxtbx/imageset.h dxtbx/array_family/ dxtbx/array_family/flex_table.h dxtbx/array_family/flex_table_suite.h dxtbx/array_family/ref_pickle_double_buffered.h dxtbx/boost_python/ dxtbx/boost_python/compression.h dxtbx/format/ dxtbx/format/image.h dxtbx/format/boost_python/ dxtbx/format/boost_python/cbf_read_buffer.h dxtbx/masking/ dxtbx/masking/goniometer_shadow_masking.h dxtbx/masking/masking.h dxtbx/model/ dxtbx/model/beam.h dxtbx/model/crystal.h dxtbx/model/detector.h dxtbx/model/experiment.h dxtbx/model/experiment_list.h dxtbx/model/goniometer.h dxtbx/model/kappa_goniometer.h dxtbx/model/model_helpers.h dxtbx/model/multi_axis_goniometer.h dxtbx/model/panel.h dxtbx/model/panel_data.h dxtbx/model/parallax_correction.h dxtbx/model/pixel_to_millimeter.h dxtbx/model/ray_intersection.h dxtbx/model/scan.h dxtbx/model/scan_helpers.h dxtbx/model/spectrum.h dxtbx/model/virtual_panel.h dxtbx/model/boost_python/ dxtbx/model/boost_python/pickle_suite.h dxtbx/model/boost_python/to_from_dict.h sent 393,379 bytes received 610 bytes 787,978.00 bytes/sec total size is 390,974 speedup is 0.99 building file list ... done ./ fem.hpp noexcept_false.hpp fem/ fem/arr.hpp fem/arr_and_str_indices.hpp fem/arr_ref.hpp fem/arr_size.hpp fem/close_chain.hpp fem/common.hpp fem/data.hpp fem/data_of_type.hpp fem/data_type_star.hpp fem/dimension.hpp fem/do.hpp fem/error_utils.hpp fem/file_positioning_chain.hpp fem/format.hpp fem/inquire_chain.hpp fem/intrinsics.hpp fem/intrinsics_extra.hpp fem/io.hpp fem/io_exceptions.hpp fem/main.hpp fem/major_types.hpp fem/open_chain.hpp fem/read.hpp fem/size_t.hpp fem/star.hpp fem/stop.hpp fem/str.hpp fem/str_arr_ref.hpp fem/str_ref.hpp fem/variant.hpp fem/write.hpp fem/zero.hpp fem/utils/ fem/utils/char.hpp fem/utils/double_to_string.hpp fem/utils/equivalence.hpp fem/utils/int_types.hpp fem/utils/misc.hpp fem/utils/path.hpp fem/utils/random.hpp fem/utils/real_as_string.hpp fem/utils/simple_streams.hpp fem/utils/string.hpp fem/utils/string_to_double.hpp fem/utils/string_to_double_fmt.hpp fem/utils/token.hpp sent 203,951 bytes received 918 bytes 409,738.00 bytes/sec total size is 200,764 speedup is 0.98 building file list ... done gltbx/ gltbx/error.h gltbx/error_utils.h gltbx/fonts_ucs.h gltbx/glext.h gltbx/include_opengl.h gltbx/pointer_args_bpl.h gltbx/quadrics.h gltbx/special_wrapper_support.h gltbx/util.h sent 598,784 bytes received 190 bytes 1,197,948.00 bytes/sec total size is 597,954 speedup is 1.00 building file list ... done iotbx/ iotbx/error.h iotbx/detectors/ iotbx/detectors/bruker.h iotbx/detectors/display.h iotbx/detectors/image_divider.h iotbx/detectors/scanbox.h iotbx/detectors/context/ iotbx/detectors/context/spot_xy_convention.h iotbx/dsn6/ iotbx/dsn6/dsn6.hpp iotbx/mtz/ iotbx/mtz/batch.h iotbx/mtz/column.h iotbx/mtz/crystal.h iotbx/mtz/dataset.h iotbx/mtz/object.h iotbx/pdb/ iotbx/pdb/common_residue_names.h iotbx/pdb/hierarchy.h iotbx/pdb/hierarchy_atoms.h iotbx/pdb/hierarchy_bpl.h iotbx/pdb/hybrid_36_c.h iotbx/pdb/hybrid_36_cpp.h iotbx/pdb/input.h iotbx/pdb/modified_aa_names.h iotbx/pdb/modified_rna_dna_names.h iotbx/pdb/namespace.h iotbx/pdb/rna_dna_atom_names.h iotbx/pdb/small_str.h iotbx/pdb/utils.h iotbx/pdb/write_utils.h iotbx/pdb/write_utils_bpl.h iotbx/pdb/xray_structure.h iotbx/shelx/ iotbx/shelx/hklf.h iotbx/xplor/ iotbx/xplor/map_reader.h iotbx/xplor/map_writer.h sent 270,326 bytes received 629 bytes 541,910.00 bytes/sec total size is 267,526 speedup is 0.99 building file list ... done sent 488 bytes received 12 bytes 1,000.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done mmtbx/ mmtbx/error.h mmtbx/import_scitbx_af.h mmtbx/alignment/ mmtbx/alignment/align.h mmtbx/alignment/alignment.h mmtbx/alignment/tables.h mmtbx/building/ mmtbx/building/loop_closure/ mmtbx/building/loop_closure/ccd.h mmtbx/bulk_solvent/ mmtbx/bulk_solvent/bulk_solvent.h mmtbx/bulk_solvent/mosaic.h mmtbx/den/ mmtbx/den/den.h mmtbx/dynamics/ mmtbx/dynamics/dynamics.h mmtbx/f_model/ mmtbx/f_model/f_model.h mmtbx/geometry/ mmtbx/geometry/asa.hpp mmtbx/geometry/calculator.hpp mmtbx/geometry/clash.hpp mmtbx/geometry/containment.hpp mmtbx/geometry/flattening.hpp mmtbx/geometry/indexing.hpp mmtbx/geometry/overlap.hpp mmtbx/geometry/primitive.hpp mmtbx/geometry/sphere_surface_sampling.hpp mmtbx/geometry/boost_python/ mmtbx/geometry/boost_python/containment.hpp mmtbx/geometry/boost_python/indexing.hpp mmtbx/geometry_restraints/ mmtbx/geometry_restraints/ramachandran.h mmtbx/geometry_restraints/reference_coordinate.h mmtbx/hydrogens/ mmtbx/hydrogens/hydrogens.h mmtbx/masks/ mmtbx/masks/atom_mask.h mmtbx/masks/grid_symop.h mmtbx/masks/util.h mmtbx/max_lik/ mmtbx/max_lik/max_lik.h mmtbx/max_lik/solvent_distribution_nco_09may2005.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h mmtbx/max_lik/solvent_distribution_nco_14mar2005.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h mmtbx/max_lik/wat_dist_r_0_1.h mmtbx/max_lik/wat_dist_r_2p0_2p5.h mmtbx/ncs/ mmtbx/ncs/cartesian_restraints.h mmtbx/ncs/tncs.h mmtbx/pair_interaction/ mmtbx/pair_interaction/interaction.h mmtbx/probe/ mmtbx/probe/Common.h mmtbx/probe/DotSpheres.h mmtbx/probe/Scoring.h mmtbx/probe/SpatialQuery.h mmtbx/reduce/ mmtbx/reduce/InteractionGraph.h mmtbx/reduce/Optimizers.h mmtbx/reduce/PositionReturn.h mmtbx/rotamer/ mmtbx/rotamer/fit.h mmtbx/rsr/ mmtbx/rsr/rsr.h mmtbx/scaling/ mmtbx/scaling/absolute_scaling.h mmtbx/scaling/outlier.h mmtbx/scaling/relative_scaling.h mmtbx/scaling/scaling.h mmtbx/scaling/twinning.h mmtbx/secondary_structure/ mmtbx/secondary_structure/dssp.hpp mmtbx/secondary_structure/identify.hpp mmtbx/tls/ mmtbx/tls/decompose.h mmtbx/tls/optimise_amplitudes.h mmtbx/tls/tls.h mmtbx/tls/utils.h mmtbx/utils/ mmtbx/utils/utils.h mmtbx/validation/ mmtbx/validation/ramachandran/ mmtbx/validation/ramachandran/rama8000_tables.h mmtbx/validation/ramachandran/rama_eval.h sent 2,052,487 bytes received 1,291 bytes 4,107,556.00 bytes/sec total size is 2,046,334 speedup is 1.00 building file list ... done omptbx/ omptbx/lock.h omptbx/omp_or_stubs.h omptbx/stubs.h sent 2,111 bytes received 76 bytes 4,374.00 bytes/sec total size is 1,850 speedup is 0.85 building file list ... done rstbx/ rstbx/backplane.h rstbx/import_scitbx_af.hpp rstbx/apps/ rstbx/apps/stills/ rstbx/apps/stills/simple_integration.h rstbx/bandpass/ rstbx/bandpass/parameters.h rstbx/bandpass/subpixel_joint_model.h rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/bpcx/detector_model/sensor.h rstbx/diffraction/ rstbx/diffraction/ewald_sphere.h rstbx/diffraction/partial_spot_position_partial_H.h rstbx/diffraction/reflection_range.h rstbx/diffraction/fastbragg/ rstbx/diffraction/fastbragg/fastbragg.h rstbx/dps_core/ rstbx/dps_core/direction.h rstbx/dps_core/directional_fft.h rstbx/dps_core/dps_core.h rstbx/dps_core/spotclass.h rstbx/indexing_api/ rstbx/indexing_api/indexing_api.h rstbx/simage/ rstbx/simage/image_simple.hpp rstbx/simulation/ rstbx/simulation/sim_xfel1.h rstbx/symmetry/ rstbx/symmetry/constraints/ rstbx/symmetry/constraints/a_g_conversion.h sent 111,330 bytes received 400 bytes 223,460.00 bytes/sec total size is 109,476 speedup is 0.98 building file list ... done scitbx/ scitbx/auto_array.h scitbx/constants.h scitbx/cubicle_neighbors.hpp scitbx/cubicles.h scitbx/error.h scitbx/error_utils.h scitbx/histogram.h scitbx/indexed_value.h scitbx/iso_surface.h scitbx/lbfgs.h scitbx/lbfgsb.h scitbx/mat2.h scitbx/mat3.h scitbx/numerical.h scitbx/r3_utils.hpp scitbx/random.h scitbx/random_legacy_boost_1_63.h scitbx/rational.h scitbx/rotr3.h scitbx/sym_mat2.h scitbx/sym_mat3.h scitbx/type_holder.h scitbx/vec2.h scitbx/vec3.h scitbx/weighted_histogram.h scitbx/array_family/ scitbx/array_family/array_adaptor.h scitbx/array_family/block_iterator.h scitbx/array_family/counts.h scitbx/array_family/error.h scitbx/array_family/flex_types.h scitbx/array_family/initialiser.h scitbx/array_family/linear_interpolation.h scitbx/array_family/loops.h scitbx/array_family/memory.h scitbx/array_family/misc_functions.h scitbx/array_family/owning_ref.h scitbx/array_family/range.h scitbx/array_family/ref.h scitbx/array_family/ref_matrix.h scitbx/array_family/ref_reductions.h scitbx/array_family/selections.h scitbx/array_family/shared.h scitbx/array_family/shared_plain.h scitbx/array_family/simple_io.h scitbx/array_family/simple_tiny_io.h scitbx/array_family/slice.h scitbx/array_family/small.h scitbx/array_family/small_plain.h scitbx/array_family/sort.h scitbx/array_family/tiny.h scitbx/array_family/tiny_mat_ref.h scitbx/array_family/tiny_plain.h scitbx/array_family/tiny_types.h scitbx/array_family/type_traits.h scitbx/array_family/versa.h scitbx/array_family/versa_matrix.h scitbx/array_family/versa_plain.h scitbx/array_family/accessors/ scitbx/array_family/accessors/c_grid.h scitbx/array_family/accessors/c_grid_padded.h scitbx/array_family/accessors/c_grid_padded_periodic.h scitbx/array_family/accessors/c_grid_periodic.h scitbx/array_family/accessors/c_index_1d_calculator.h scitbx/array_family/accessors/c_interval_grid.h scitbx/array_family/accessors/f_grid.h scitbx/array_family/accessors/flex_grid.h scitbx/array_family/accessors/mat_grid.h scitbx/array_family/accessors/packed_matrix.h scitbx/array_family/accessors/rectangular_full_packed.h scitbx/array_family/accessors/row_and_column.h scitbx/array_family/accessors/striding.h scitbx/array_family/accessors/traits.h scitbx/array_family/accessors/trivial.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/byte_str.h scitbx/array_family/boost_python/c_grid_flex_conversions.h scitbx/array_family/boost_python/flex_helpers.h scitbx/array_family/boost_python/flex_pickle_double_buffered.h scitbx/array_family/boost_python/flex_pickle_single_buffered.h scitbx/array_family/boost_python/flex_wrapper.h scitbx/array_family/boost_python/flex_wrapper_complex.h scitbx/array_family/boost_python/numpy_bridge.hpp scitbx/array_family/boost_python/owning_ref_conversions.h scitbx/array_family/boost_python/packed_to_flex_conversions.h scitbx/array_family/boost_python/passing_flex_by_reference.h scitbx/array_family/boost_python/range_wrappers.h scitbx/array_family/boost_python/ref_flex_conversions.h scitbx/array_family/boost_python/ref_from_array.h scitbx/array_family/boost_python/ref_pickle_double_buffered.h scitbx/array_family/boost_python/selections_wrapper.h scitbx/array_family/boost_python/shared_flat_conversions.h scitbx/array_family/boost_python/shared_flex_conversions.h scitbx/array_family/boost_python/shared_wrapper.h scitbx/array_family/boost_python/utils.h scitbx/array_family/detail/ scitbx/array_family/detail/auto_allocator.h scitbx/array_family/detail/generic_array_functors.h scitbx/array_family/detail/generic_array_operators.h scitbx/array_family/detail/misc.h scitbx/array_family/detail/push_back_etc.h scitbx/array_family/detail/reducing_boolean_mem_fun.h scitbx/array_family/detail/ref_helpers.h scitbx/array_family/detail/tiny_helpers.h scitbx/boost_python/ scitbx/boost_python/array_as_list.h scitbx/boost_python/container_conversions.h scitbx/boost_python/cstringio_utils.h scitbx/boost_python/is_polymorphic_workaround.h scitbx/boost_python/iterator_range.hpp scitbx/boost_python/iterator_wrappers.h scitbx/boost_python/pair_as_tuple.hpp scitbx/boost_python/sequence_as_array.h scitbx/boost_python/slice.h scitbx/boost_python/stl_map_as_dict.h scitbx/boost_python/utils.h scitbx/examples/ scitbx/examples/bevington/ scitbx/examples/bevington/prototype_core.h scitbx/fftpack/ scitbx/fftpack/complex_to_complex.h scitbx/fftpack/complex_to_complex_2d.h scitbx/fftpack/complex_to_complex_3d.h scitbx/fftpack/factorization.h scitbx/fftpack/gridding.h scitbx/fftpack/real_to_complex.h scitbx/fftpack/real_to_complex_3d.h scitbx/fftpack/detail/ scitbx/fftpack/detail/real_to_complex_backward.h scitbx/fftpack/detail/real_to_complex_forward.h scitbx/fftpack/detail/ref.h scitbx/glmtbx/ scitbx/glmtbx/family.h scitbx/glmtbx/glm.h scitbx/glmtbx/robust_glm.h scitbx/graphics_utils/ scitbx/graphics_utils/colors.h scitbx/lbfgs/ scitbx/lbfgs/drop_convergence_test.h scitbx/lbfgs/raw.h scitbx/lbfgs/raw_reference.h scitbx/lbfgsb/ scitbx/lbfgsb/fortran_interface.h scitbx/lbfgsb/raw.h scitbx/line_search/ scitbx/line_search/more_thuente_1994.h scitbx/line_search/more_thuente_1994_raw.h scitbx/lstbx/ scitbx/lstbx/normal_equations.h scitbx/math/ scitbx/math/2d_zernike_moments.h scitbx/math/accumulators.h scitbx/math/angle_derivative.h scitbx/math/approx_equal.h scitbx/math/atanh.h scitbx/math/basic_statistics.h scitbx/math/bessel.h scitbx/math/cartesian_product_fixed_size.hpp scitbx/math/chebyshev.h scitbx/math/compile_time.h scitbx/math/continued_fraction.h scitbx/math/copysign.h scitbx/math/cubic_equation.h scitbx/math/dihedral.h scitbx/math/distance_difference.h scitbx/math/distributions.h scitbx/math/eigensystem.h scitbx/math/erf.h scitbx/math/euler_angles.h scitbx/math/fast_approx_math.h scitbx/math/floating_point_epsilon.h scitbx/math/g_function.h scitbx/math/gamma.h scitbx/math/gaussian_fit_1d_analytical.h scitbx/math/gcd.h scitbx/math/golay.h scitbx/math/halton.h scitbx/math/icosahedron.h scitbx/math/imaginary.h scitbx/math/inertia_tensor.h scitbx/math/interpolation.h scitbx/math/jacks_expf.h scitbx/math/lambertw.h scitbx/math/least_squares_plane.h scitbx/math/linear_correlation.h scitbx/math/linear_interpolation.h scitbx/math/linear_regression.h scitbx/math/mean_and_variance.h scitbx/math/minimum_covering_sphere.h scitbx/math/modulo.h scitbx/math/namespace.h scitbx/math/numeric_limits.h scitbx/math/orthonormal_basis.h scitbx/math/parabolic_cylinder_d.h scitbx/math/phase_error.h scitbx/math/polygon_intersection.h scitbx/math/principal_axes_of_inertia.h scitbx/math/quadrature.h scitbx/math/r3_rotation.h scitbx/math/resample.h scitbx/math/rotate_around_axis.h scitbx/math/rotation.h scitbx/math/superpose.h scitbx/math/tetrahedron.h scitbx/math/traits.h scitbx/math/unimodular_generator.h scitbx/math/utils.h scitbx/math/weighted_covariance.h scitbx/math/zernike.h scitbx/math/zernike_moments.h scitbx/math/erf/ scitbx/math/erf/constants.h scitbx/math/erf/engine.h scitbx/math/gaussian/ scitbx/math/gaussian/fit.h scitbx/math/gaussian/namespace.h scitbx/math/gaussian/sum.h scitbx/math/gaussian/term.h scitbx/matrix/ scitbx/matrix/as_xyz.h scitbx/matrix/cholesky.h scitbx/matrix/delta_tensors.h scitbx/matrix/diagonal.h scitbx/matrix/eigensystem.h scitbx/matrix/givens.h scitbx/matrix/householder.h scitbx/matrix/inversion.h scitbx/matrix/lu_decomposition.h scitbx/matrix/matrix_vector_operations.h scitbx/matrix/move.h scitbx/matrix/multiply.h scitbx/matrix/norms.h scitbx/matrix/outer_product.h scitbx/matrix/packed.h scitbx/matrix/row_echelon.h scitbx/matrix/row_echelon_full_pivoting.h scitbx/matrix/row_echelon_full_pivoting_impl.h scitbx/matrix/row_echelon_full_pivoting_small.h scitbx/matrix/special_matrices.h scitbx/matrix/svd.h scitbx/matrix/symmetric_rank_1_update.h scitbx/matrix/tensor_rank_2.h scitbx/matrix/tensors.h scitbx/matrix/tests.h scitbx/matrix/transpose_multiply.h scitbx/matrix/triangular_systems.h scitbx/matrix/vector_operations.h scitbx/matrix/tests/ scitbx/matrix/tests/utils.h scitbx/minpack/ scitbx/minpack/levenberg_marquardt.h scitbx/minpack/raw.h scitbx/misc/ scitbx/misc/file_utils.h scitbx/misc/positive_getitem_index.h scitbx/misc/split_lines.h scitbx/random/ scitbx/random/mersenne_twister.h scitbx/random/variate_generator.h scitbx/random/boost_python/ scitbx/random/boost_python/random.h scitbx/rigid_body/ scitbx/rigid_body/array_packing.h scitbx/rigid_body/body_lib.h scitbx/rigid_body/body_t.h scitbx/rigid_body/featherstone.h scitbx/rigid_body/joint_lib.h scitbx/rigid_body/joint_t.h scitbx/rigid_body/matrix_helpers.h scitbx/rigid_body/namespace.h scitbx/rigid_body/spatial_lib.h scitbx/rigid_body/tardy.h scitbx/serialization/ scitbx/serialization/base_256.h scitbx/serialization/double_buffered.h scitbx/serialization/single_buffered.h scitbx/slatec/ scitbx/slatec/lib_c.h scitbx/slatec/lib_cpp.h scitbx/sparse/ scitbx/sparse/approx_equal.h scitbx/sparse/dfs.h scitbx/sparse/io.h scitbx/sparse/lu_factorization.h scitbx/sparse/matrix.h scitbx/sparse/operators.h scitbx/sparse/random.h scitbx/sparse/triangular.h scitbx/sparse/util.h scitbx/sparse/vector.h scitbx/sparse/boost_python/ scitbx/sparse/boost_python/vector.h scitbx/stl/ scitbx/stl/map_as_python_dict.h scitbx/stl/map_fwd.h scitbx/stl/map_wrapper.h scitbx/stl/set_wrapper.h scitbx/stl/vector_as_python_list.h scitbx/stl/vector_io.h scitbx/stl/vector_wrapper.h scitbx/suffixtree/ scitbx/suffixtree/builder.hpp scitbx/suffixtree/edge.hpp scitbx/suffixtree/exception.hpp scitbx/suffixtree/glyph.hpp scitbx/suffixtree/iterator.hpp scitbx/suffixtree/matching_statistics.hpp scitbx/suffixtree/tree.hpp scitbx/suffixtree/word.hpp scitbx/suffixtree/boost_python/ scitbx/suffixtree/boost_python/edge_exports.hpp scitbx/suffixtree/boost_python/iterator_wrapper.hpp scitbx/suffixtree/boost_python/object_extensions.hpp scitbx/suffixtree/boost_python/tree_exports.hpp scitbx/util/ scitbx/util/cpu_timer.h scitbx/wigner/ scitbx/wigner/wigner3j.h sent 1,905,479 bytes received 5,521 bytes 3,822,000.00 bytes/sec total size is 1,885,735 speedup is 0.99 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/error.h smtbx/import_cctbx.h smtbx/import_scitbx_af.h smtbx/ab_initio/ smtbx/ab_initio/density_modification.h smtbx/refinement/ smtbx/refinement/import_cctbx_xray.h smtbx/refinement/least_squares.h smtbx/refinement/weighting_schemes.h smtbx/refinement/constraints/ smtbx/refinement/constraints/affine.h smtbx/refinement/constraints/direction.h smtbx/refinement/constraints/geometrical_hydrogens.h smtbx/refinement/constraints/occupancy.h smtbx/refinement/constraints/proxy.h smtbx/refinement/constraints/reparametrisation.h smtbx/refinement/constraints/rigid.h smtbx/refinement/constraints/same_group.h smtbx/refinement/constraints/scaled_adp.h smtbx/refinement/constraints/scatterer_parameters.h smtbx/refinement/constraints/shared.h smtbx/refinement/constraints/special_position.h smtbx/refinement/constraints/symmetry_equivalent.h smtbx/refinement/constraints/u_eq_dependent_u_iso.h smtbx/refinement/constraints/u_iso_dependent_u_iso.h smtbx/refinement/restraints/ smtbx/refinement/restraints/origin_fixing.h smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/standard_xray.h smtbx/structure_factors/direct/table_based.h sent 182,132 bytes received 512 bytes 365,288.00 bytes/sec total size is 179,686 speedup is 0.98 building file list ... done spotfinder/ spotfinder/applications/ spotfinder/applications/find_active_area.h spotfinder/core_toolbox/ spotfinder/core_toolbox/distl.h spotfinder/core_toolbox/hough.h spotfinder/core_toolbox/libdistl.h spotfinder/core_toolbox/spot_shapes.h spotfinder/core_toolbox/spot_types.h spotfinder/core_toolbox/spotfilter.h spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/singlemask.h spotfinder/dxtbx_toolbox/ spotfinder/dxtbx_toolbox/distl.h spotfinder/dxtbx_toolbox/libdistl.h sent 42,932 bytes received 221 bytes 86,306.00 bytes/sec total size is 41,966 speedup is 0.97 building file list ... done tbxx/ tbxx/alignment.h tbxx/error_utils.hpp tbxx/libc_backtrace.hpp tbxx/optional_copy.hpp tbxx/pretty_type_name.hpp tbxx/time_accu.hpp sent 12,027 bytes received 133 bytes 24,320.00 bytes/sec total size is 11,532 speedup is 0.95 building file list ... done sent 155 bytes received 12 bytes 334.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done ./ boost_adaptbx/ boost_adaptbx/type_id_eq.h cctbx/ cctbx/boost_python/ cctbx/boost_python/flex_fwd.h scitbx/ scitbx/lbfgs_fem.hpp scitbx/array_family/ scitbx/array_family/operator_traits_builtin.h scitbx/array_family/ref_algebra.h scitbx/array_family/ref_apply.h scitbx/array_family/shared_algebra.h scitbx/array_family/shared_apply.h scitbx/array_family/shared_plain_apply.h scitbx/array_family/shared_reductions.h scitbx/array_family/small_algebra.h scitbx/array_family/small_apply.h scitbx/array_family/small_plain_apply.h scitbx/array_family/small_reductions.h scitbx/array_family/tiny_algebra.h scitbx/array_family/tiny_apply.h scitbx/array_family/tiny_plain_apply.h scitbx/array_family/tiny_reductions.h scitbx/array_family/versa_algebra.h scitbx/array_family/versa_apply.h scitbx/array_family/versa_plain_apply.h scitbx/array_family/versa_reductions.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/flex_fwd.h scitbx/array_family/detail/ scitbx/array_family/detail/operator_functors.h scitbx/array_family/detail/std_imports.h smtbx/ smtbx/boost_python/ smtbx/boost_python/flex_fwd.h sent 347,311 bytes received 540 bytes 231,900.67 bytes/sec total size is 345,070 speedup is 0.99 building file list ... done sent 256 bytes received 12 bytes 536.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/ boost_adaptbx/command_line/ sent 554 bytes received 55 bytes 1,218.00 bytes/sec total size is 6,883 speedup is 11.30 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/command_line/ sent 239 bytes received 28 bytes 534.00 bytes/sec total size is 1,215 speedup is 4.55 building file list ... done sent 145 bytes received 12 bytes 314.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done cctbx/ cctbx/command_line/ cctbx/command_line/web.install.csh sent 3,067 bytes received 101 bytes 6,336.00 bytes/sec total size is 39,666 speedup is 12.52 building file list ... done sent 87 bytes received 12 bytes 198.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done crys3d/ crys3d/command_line/ sent 494 bytes received 52 bytes 1,092.00 bytes/sec total size is 31,515 speedup is 57.72 building file list ... done dxtbx/ dxtbx/command_line/ sent 897 bytes received 82 bytes 1,958.00 bytes/sec total size is 82,029 speedup is 83.79 building file list ... done fable/ fable/command_line/ sent 480 bytes received 43 bytes 1,046.00 bytes/sec total size is 15,542 speedup is 29.72 building file list ... done gltbx/ gltbx/command_line/ sent 189 bytes received 28 bytes 434.00 bytes/sec total size is 606 speedup is 2.79 building file list ... done iotbx/ iotbx/command_line/ sent 2,834 bytes received 244 bytes 6,156.00 bytes/sec total size is 240,966 speedup is 78.29 building file list ... done libtbx/ libtbx/command_line/ libtbx/command_line/bash.sh libtbx/command_line/bibtex.sh libtbx/command_line/bundle_as_selfx.csh libtbx/command_line/configure.bat libtbx/command_line/configure.sh libtbx/command_line/csh.sh libtbx/command_line/exec.sh libtbx/command_line/gdb.sh libtbx/command_line/latex.sh libtbx/command_line/pdflatex.sh libtbx/command_line/refresh.bat libtbx/command_line/refresh.sh libtbx/command_line/sh.sh libtbx/command_line/tcsh.sh libtbx/command_line/unpack_in_sources.csh libtbx/command_line/valgrind.sh sent 7,203 bytes received 614 bytes 15,634.00 bytes/sec total size is 175,907 speedup is 22.50 building file list ... done mmtbx/ mmtbx/command_line/ mmtbx/regression/ mmtbx/regression/command_line/ mmtbx/regression/command_line/tst_find_residue_in_pdb.py sent 4,972 bytes received 407 bytes 10,758.00 bytes/sec total size is 712,953 speedup is 132.54 building file list ... done sent 76 bytes received 12 bytes 176.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done rstbx/ rstbx/command_line/ sent 775 bytes received 49 bytes 1,648.00 bytes/sec total size is 11,108 speedup is 13.48 building file list ... done scitbx/ scitbx/command_line/ scitbx/command_line/apply_tapenade_hints.py scitbx/command_line/generate_error_h.py scitbx/command_line/histogram.py scitbx/command_line/show_exp_times.py scitbx/command_line/show_sizes.py scitbx/command_line/unicode_examples.py sent 11,699 bytes received 136 bytes 23,670.00 bytes/sec total size is 9,958 speedup is 0.84 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/command_line/ sent 905 bytes received 40 bytes 1,890.00 bytes/sec total size is 37,436 speedup is 39.61 building file list ... done spotfinder/ spotfinder/command_line/ sent 538 bytes received 43 bytes 1,162.00 bytes/sec total size is 22,750 speedup is 39.16 building file list ... done sent 87 bytes received 12 bytes 198.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done wxtbx/ wxtbx/command_line/ sent 485 bytes received 58 bytes 1,086.00 bytes/sec total size is 16,078 speedup is 29.61 building file list ... done sent 256 bytes received 12 bytes 536.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/graph/ boost_adaptbx/graph/tests/ boost_adaptbx/graph/tests/tst_graph.py boost_adaptbx/graph/tests/tst_graph_breadth_first_search.py boost_adaptbx/graph/tests/tst_graph_clustering_algorithm.py boost_adaptbx/graph/tests/tst_graph_connected_component_algorithm.py boost_adaptbx/graph/tests/tst_graph_graph_structure_comparison.py boost_adaptbx/graph/tests/tst_graph_maximum_clique.py boost_adaptbx/graph/tests/tst_graph_metric.py boost_adaptbx/graph/tests/tst_graph_min_cut_max_flow.py boost_adaptbx/graph/tests/tst_graph_minimum_cut_enumerate.py boost_adaptbx/graph/tests/tst_graph_utility.py boost_adaptbx/tests/ boost_adaptbx/tests/tst_boost_thread.py boost_adaptbx/tests/tst_char_array.py boost_adaptbx/tests/tst_deprecation_tools.py boost_adaptbx/tests/tst_libc_backtrace.py boost_adaptbx/tests/tst_optional.py boost_adaptbx/tests/tst_optional_copy.cpp boost_adaptbx/tests/tst_optional_copy.h boost_adaptbx/tests/tst_python_streambuf.py boost_adaptbx/tests/tst_rational.py boost_adaptbx/tests/tst_std_pair.py boost_adaptbx/tests/tst_stderr_stdout.py boost_adaptbx/tests/tst_stdin.py boost_adaptbx/tests/tst_stdout.py boost_adaptbx/tests/tst_string_representation.py boost_adaptbx/tests/tst_swig_args.py boost_adaptbx/tests/tst_tuple.py sent 91,624 bytes received 515 bytes 184,278.00 bytes/sec total size is 89,657 speedup is 0.97 building file list ... done cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/tst_memory.cpp sent 1,216 bytes received 34 bytes 2,500.00 bytes/sec total size is 967 speedup is 0.77 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/tst_fftlib.py sent 7,590 bytes received 44 bytes 15,268.00 bytes/sec total size is 9,205 speedup is 1.21 building file list ... done cctbx/adp_restraints/ cctbx/adptbx/ cctbx/adptbx/boost_python/ cctbx/adptbx/boost_python/tst_adptbx.py cctbx/adptbx/boost_python/tst_hirshfeld.py cctbx/array_family/ cctbx/array_family/boost_python/ cctbx/array_family/boost_python/tst_flex.py cctbx/covariance/ cctbx/covariance/tests/ cctbx/covariance/tests/tst_covariance.py cctbx/crystal/ cctbx/development/ cctbx/dispersion/ cctbx/dispersion/tests/ cctbx/dispersion/tests/tst_kramers_kronig.py cctbx/dispersion/tests/tst_kramers_kronig_helper.py cctbx/dispersion/tests/tst_kramers_kronig_optimize.py cctbx/dmtbx/ cctbx/dmtbx/boost_python/ cctbx/dmtbx/boost_python/tst_dmtbx.py cctbx/eltbx/ cctbx/eltbx/tests/ cctbx/eltbx/tests/tst_attenuation_coefficient.py cctbx/eltbx/tests/tst_chemical_elements.py cctbx/eltbx/tests/tst_covalent_radii.py cctbx/eltbx/tests/tst_formula.py cctbx/eltbx/tests/tst_henke.py cctbx/eltbx/tests/tst_icsd_radii.py cctbx/eltbx/tests/tst_neutron.py cctbx/eltbx/tests/tst_sasaki.py cctbx/eltbx/tests/tst_tiny_pse.py cctbx/eltbx/tests/tst_wavelengths.py cctbx/eltbx/tests/tst_xray_scattering.py cctbx/examples/ cctbx/examples/merging/ cctbx/geometry/ cctbx/geometry/tests/ cctbx/geometry/tests/tst_geometry.py cctbx/geometry_restraints/ cctbx/maptbx/ cctbx/maptbx/boost_python/ cctbx/maptbx/boost_python/tst_maptbx.py cctbx/masks/ cctbx/masks/tests/ cctbx/masks/tests/tst_flood_fill.py cctbx/math/ cctbx/math/boost_python/ cctbx/math/boost_python/tst_math.py cctbx/miller/ cctbx/miller/boost_python/ cctbx/miller/boost_python/tst_miller.py cctbx/multipolar/ cctbx/multipolar/regression/ cctbx/multipolar/regression/tst_multipolar.py cctbx/omz/ cctbx/omz/tst_cod.csh cctbx/regression/ cctbx/sgtbx/ cctbx/sgtbx/boost_python/ cctbx/sgtbx/boost_python/tst_N_fold_rot.py cctbx/sgtbx/boost_python/tst_sgtbx.py cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cctbx/symmetry_search/ cctbx/symmetry_search/tests/ cctbx/symmetry_search/tests/tst_from_map.py cctbx/symmetry_search/tests/tst_goodness_of_symmetry.py cctbx/translation_search/ cctbx/translation_search/boost_python/ cctbx/translation_search/boost_python/tst_translation_search.py cctbx/uctbx/ cctbx/uctbx/boost_python/ cctbx/uctbx/boost_python/tst_crystal_orientation.py cctbx/uctbx/boost_python/tst_uctbx.py cctbx/uctbx/lrl/ cctbx/uctbx/lrl/tst_match_lattices.py cctbx/xray/ cctbx/xray/boost_python/ cctbx/xray/boost_python/tst_f_model.py cctbx/xray/boost_python/tst_targets_fd.py cctbx/xray/boost_python/tst_xray.py cctbx/xray/observations/ cctbx/xray/targets/ sent 436,713 bytes received 1,254 bytes 291,978.00 bytes/sec total size is 2,052,913 speedup is 4.69 building file list ... done cma_es/ sent 121 bytes received 22 bytes 286.00 bytes/sec total size is 3,008 speedup is 21.03 building file list ... done crys3d/regression/ sent 373 bytes received 33 bytes 812.00 bytes/sec total size is 41,841 speedup is 103.06 building file list ... done sent 635 bytes received 12 bytes 1,294.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done fable/test/ fable/test/tst_command_line.py fable/test/tst_io.py fable/test/tst_separate_files.py fable/test/tst_show_calls.py sent 12,870 bytes received 106 bytes 25,952.00 bytes/sec total size is 151,869 speedup is 11.70 building file list ... done sent 220 bytes received 24 bytes 488.00 bytes/sec total size is 8,108 speedup is 33.23 building file list ... done iotbx/bioinformatics/ iotbx/bioinformatics/test/ iotbx/bioinformatics/test/tst_alignment_as_hsearch.py iotbx/bioinformatics/test/tst_ebi_wu_blast_xml.py iotbx/bioinformatics/test/tst_local_blast.py iotbx/bioinformatics/test/tst_ncbi_blast_xml.py iotbx/ccp4_map/ iotbx/ccp4_map/tst_input.map iotbx/cif/ iotbx/cif/tests/ iotbx/cif/tests/tst_citations.py iotbx/cif/tests/tst_cod.py iotbx/cif/tests/tst_geometry.py iotbx/cif/tests/tst_lex_parse_build.py iotbx/cif/tests/tst_model.py iotbx/cif/tests/tst_model_builder.py iotbx/cif/tests/tst_parser.py iotbx/cif/tests/tst_restraints.py iotbx/cif/tests/tst_ucif_examples_compilation.py iotbx/cif/tests/tst_validation.py iotbx/cns/ iotbx/detectors/ iotbx/dsn6/ iotbx/examples/ iotbx/examples/pdb_truncate_to_ala/ iotbx/examples/pdb_truncate_to_ala/tst.py iotbx/gui_tools/ iotbx/kriber/ iotbx/mtz/ iotbx/pdb/ iotbx/pdb/remediation/ iotbx/regression/ iotbx/regression/ncs/ iotbx/regression/secondary_structure/ iotbx/regression/secondary_structure/tst_annotation.py iotbx/regression/secondary_structure/tst_annotation_long.py iotbx/regression/secondary_structure/tst_sheet.py iotbx/scalepack/ iotbx/shelx/ iotbx/xds/ iotbx/xds/tests/ iotbx/xds/tests/tst_integrate_hkl.py iotbx/xds/tests/tst_spots_xds.py iotbx/xds/tests/tst_xds_inp.py iotbx/xds/tests/tst_xparm.py iotbx/xplor/ sent 273,433 bytes received 933 bytes 548,732.00 bytes/sec total size is 2,418,095 speedup is 8.81 building file list ... done libtbx/phil/ libtbx/queuing_system_utils/ sent 1,220 bytes received 108 bytes 2,656.00 bytes/sec total size is 254,770 speedup is 191.84 building file list ... done mmtbx/atomic_environment_vectors/ mmtbx/building/ mmtbx/building/ligands/ mmtbx/building/ligands/tst_00_mmtbx_building_ligands.map mmtbx/bulk_solvent/ mmtbx/chemical_components/ mmtbx/conformation_dependent_library/ mmtbx/density_modification/ mmtbx/disorder/ mmtbx/dynamics/ mmtbx/geometry/ mmtbx/geometry/tests/ mmtbx/geometry/tests/tst_altloc.py mmtbx/geometry/tests/tst_asa.py mmtbx/geometry/tests/tst_clash.py mmtbx/geometry/tests/tst_indexing.py mmtbx/geometry/tests/tst_shared_types.py mmtbx/geometry/tests/tst_sphere_surface_sampling.py mmtbx/geometry/tests/tst_topology.py mmtbx/geometry_restraints/ mmtbx/geometry_restraints/torsion_restraints/ mmtbx/hydrogens/ mmtbx/ias/ mmtbx/idealized_aa_residues/ mmtbx/ions/ mmtbx/ions/svm/ mmtbx/ligands/ mmtbx/maps/ mmtbx/masks/ mmtbx/masks/tst_mask.cpp mmtbx/max_lik/ mmtbx/monomer_library/ mmtbx/nci/ mmtbx/pair_interaction/ mmtbx/polygon/ mmtbx/probe/ mmtbx/probe/tst_probe.cpp mmtbx/real_space/ mmtbx/reduce/ mmtbx/refinement/ mmtbx/refinement/real_space/ mmtbx/regression/fix_cablam/ mmtbx/regression/fix_cablam/tst_basic_cl_operations.py mmtbx/regression/fix_cablam/tst_insertion_codes.py mmtbx/regression/fix_cablam/tst_one_resid_rotation.py mmtbx/regression/fix_cablam/tst_single_outliers_surroundings.py mmtbx/regression/model/ mmtbx/regression/model_idealization/ mmtbx/regression/model_idealization/tst_ext_map_01.py mmtbx/regression/model_idealization/tst_ligands.py mmtbx/regression/model_idealization/tst_nomap_01.py mmtbx/regression/model_idealization/tst_nomap_02.py mmtbx/regression/model_idealization/tst_nomap_03.py mmtbx/regression/model_idealization/tst_nomap_04.py mmtbx/regression/model_idealization/tst_with_mtz.py mmtbx/regression/model_idealization/tst_withmap_01.py mmtbx/regression/model_idealization/tst_withmap_02.py mmtbx/regression/model_idealization/tst_withmap_03.py mmtbx/regression/model_idealization/tst_withmap_04.py mmtbx/regression/model_idealization/tst_withmap_05.py mmtbx/regression/model_idealization/tst_withmap_06.py mmtbx/regression/mtz/ mmtbx/regression/mtz/tst_xtriage_fmodel.mtz mmtbx/regression/ncs/ mmtbx/regression/pdb_interpretation/ mmtbx/regression/pdb_interpretation/tst_edits.py mmtbx/regression/pdb_interpretation/tst_edits_actions.py mmtbx/regression/pdb_interpretation/tst_using_ncs_1.py mmtbx/regression/pdb_interpretation/tst_using_ncs_2.py mmtbx/regression/real_space_refine_chain/ mmtbx/regression/real_space_refine_chain/tst_00.py mmtbx/regression/real_space_refine_chain/tst_01.py mmtbx/regression/tls/ mmtbx/regression/tncs/ mmtbx/regression/tncs/tst_epsfac_and_radius.py mmtbx/regression/tncs/tst_fd.py mmtbx/regression/tncs/tst_moments.py mmtbx/regression/tncs/tst_pair.py mmtbx/ringer/ mmtbx/rotamer/ mmtbx/rsr/ mmtbx/scaling/ mmtbx/secondary_structure/ mmtbx/secondary_structure/build/ mmtbx/utils/ mmtbx/validation/ mmtbx/validation/regression/ mmtbx/wwpdb/ sent 797,297 bytes received 1,987 bytes 532,856.00 bytes/sec total size is 7,210,912 speedup is 9.02 building file list ... done omptbx/ sent 100 bytes received 22 bytes 244.00 bytes/sec total size is 1,175 speedup is 9.63 building file list ... done rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/cftbx/ rstbx/diffraction/ rstbx/diffraction/fastbragg/ rstbx/dps_core/ rstbx/indexing/ rstbx/simage/ rstbx/simulation/ rstbx/sublattice_support/ rstbx/viewer/ sent 1,046 bytes received 87 bytes 2,266.00 bytes/sec total size is 179,407 speedup is 158.35 building file list ... done scitbx/array_family/ scitbx/array_family/tst_accessors.cpp scitbx/array_family/tst_af_1.cpp scitbx/array_family/tst_af_2.cpp scitbx/array_family/tst_af_3.cpp scitbx/array_family/tst_af_4.cpp scitbx/array_family/tst_af_5.cpp scitbx/array_family/tst_af_helpers.cpp scitbx/array_family/tst_mat3.cpp scitbx/array_family/tst_optional_copy.cpp scitbx/array_family/tst_rectangular_full_packed.cpp scitbx/array_family/tst_ref_matrix_facet.cpp scitbx/array_family/tst_sym_mat3.cpp scitbx/array_family/tst_unsigned_float_arithmetic.cpp scitbx/array_family/tst_vec3.cpp scitbx/array_family/boost_python/ scitbx/array_family/boost_python/tst_cost_of_m_handle_in_af_shared.py scitbx/array_family/boost_python/tst_flex.py scitbx/array_family/boost_python/tst_flex_argument_passing.py scitbx/array_family/boost_python/tst_integer_offsets_vs_pointers.py scitbx/array_family/boost_python/tst_numpy_bridge.py scitbx/array_family/boost_python/tst_shared.py scitbx/array_family/boost_python/tst_smart_selection.py scitbx/dtmin/ scitbx/dtmin/regression/ scitbx/dtmin/regression/tst_dtmin_basic.py scitbx/dtmin/regression/tst_dtmin_booth.py scitbx/dtmin/regression/tst_dtmin_twisted.py scitbx/error/ scitbx/error/tst_error.cpp scitbx/error/tst_error.py scitbx/fftpack/ scitbx/fftpack/boost_python/ scitbx/fftpack/boost_python/tst_fftpack.py scitbx/fftpack/timing/ scitbx/fftpack/timing/tst3d.cpp scitbx/glmtbx/ scitbx/glmtbx/tests/ scitbx/glmtbx/tests/tst.py scitbx/graph/ scitbx/graphics_utils/ scitbx/iso_surface/ scitbx/iso_surface/tst_iso_surface.m scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs.cpp scitbx/lbfgsb/ scitbx/lbfgsb/boost_python/ scitbx/lbfgsb/boost_python/tst_fit_cdf.py scitbx/lbfgsb/boost_python/tst_lbfgsb.py scitbx/linalg/ scitbx/linalg/tests/ scitbx/linalg/tests/tst_cholesky.py scitbx/linalg/tests/tst_eigensystem.py scitbx/linalg/tests/tst_lapack_dsyev.py scitbx/linalg/tests/tst_lapack_svd.py scitbx/linalg/tests/tst_matrix.py scitbx/linalg/tests/tst_svd.py scitbx/lstbx/ scitbx/lstbx/tests/ scitbx/lstbx/tests/tst_normal_equations.nb scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst.cpp scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky.cpp scitbx/matrix/tests/tst_givens.cpp scitbx/matrix/tests/tst_householder.cpp scitbx/matrix/tests/tst_householder.nb scitbx/matrix/tests/tst_householder.py scitbx/matrix/tests/tst_row_echelon.py scitbx/matrix/tests/tst_svd.cpp scitbx/matrix/tests/tst_svd.nb scitbx/matrix/tests/tst_svd_accuracy.nb scitbx/minpack/ scitbx/minpack/tst.py scitbx/python_utils/ scitbx/random/ scitbx/random/tests/ scitbx/random/tests/tst_random.py scitbx/rigid_body/ scitbx/rigid_body/essence/ scitbx/rigid_body/proto/ scitbx/serialization/ scitbx/serialization/tst_base_256.cpp scitbx/sparse/ scitbx/sparse/tests/ scitbx/sparse/tests/tst_lu_factorization.py scitbx/sparse/tests/tst_sparse.cpp scitbx/sparse/tests/tst_sparse.py scitbx/stl/ scitbx/suffixtree/ scitbx/suffixtree/test/ scitbx/suffixtree/test/tst_single.py scitbx/tests/ scitbx/tests/tst_basic.csh scitbx/tests/tst_basic.py scitbx/tests/tst_cubicle_neighbors.py scitbx/tests/tst_genetic_algorithm_with_mp.py scitbx/tests/tst_r3_utils.py scitbx/tests/tst_regular_grid_on_unit_sphere.py scitbx/tests/tst_smoothing.py scitbx/wigner/ sent 674,942 bytes received 1,547 bytes 1,352,978.00 bytes/sec total size is 1,108,176 speedup is 1.64 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ab_initio/ smtbx/ab_initio/tests/ smtbx/absolute_structure/ smtbx/absolute_structure/tests/ smtbx/absolute_structure/tests/tst_absolute_structure.py smtbx/masks/ smtbx/masks/tests/ smtbx/masks/tests/tst_masks.py smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp smtbx/refinement/constraints/tests/tst_reparametrisation.cpp smtbx/refinement/constraints/tests/tst_special_position.cpp smtbx/refinement/restraints/ smtbx/refinement/restraints/tests/ smtbx/refinement/restraints/tests/tst_restraints.py smtbx/refinement/tests/ smtbx/refinement/tests/tst_least_squares.py smtbx/refinement/tests/tst_weighting_schemes.py smtbx/regression/ smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/tests/ smtbx/structure_factors/direct/tests/tst_standard_xray.py sent 130,445 bytes received 252 bytes 87,131.33 bytes/sec total size is 208,206 speedup is 1.59 building file list ... done spotfinder/core_toolbox/ spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/tst_small_image.py sent 5,474 bytes received 37 bytes 11,022.00 bytes/sec total size is 5,074 speedup is 0.92 building file list ... done tbxx/ tbxx/tests/ tbxx/tests/tst_pretty_type_name.cpp sent 495 bytes received 41 bytes 1,072.00 bytes/sec total size is 323 speedup is 0.60 building file list ... done wxtbx/regression/ wxtbx/regression/tst_process_control.py sent 2,015 bytes received 34 bytes 4,098.00 bytes/sec total size is 1,770 speedup is 0.86 building file list ... done ./ annlib_adaptbx/ annlib_adaptbx/tests/ annlib_adaptbx/tests/data.txt annlib_adaptbx/tests/query.txt cma_es/cma/ cma_es/cma/initials.par fable/fem/ fable/fem/major_types.hpp fable/test/sf_times.py fable/test/lenient/ fable/test/lenient/NOTE fable/test/lenient/calling_non_external_arg.f fable/test/lenient/str_blank_str.f fable/test/lenient/str_cont_line_str.f fable/test/semantic_error/ fable/test/semantic_error/assignment_to_parameter.f fable/test/semantic_error/calling_array.f fable/test/semantic_error/calling_dimension.f fable/test/semantic_error/common_equivalence.f fable/test/semantic_error/dimension_unknown_data_type.f fable/test/semantic_error/dims_repeated_in_common.f fable/test/semantic_error/dims_repeated_in_dimension.f fable/test/semantic_error/equivalence_external.f fable/test/semantic_error/external_array.f fable/test/semantic_error/external_common.f fable/test/semantic_error/function_data_type_decl_twice.f fable/test/semantic_error/function_name_is_also_arg.f fable/test/semantic_error/inquire_both_unit_and_file.f fable/test/semantic_error/inquire_no_unit_no_file.f fable/test/semantic_error/intrinsic_common.f fable/test/semantic_error/intrinsic_dimension.f fable/test/semantic_error/missing_include.f fable/test/semantic_error/parameter_array.f fable/test/semantic_error/parameter_in_common.f fable/test/semantic_error/parameter_in_sub_args.f fable/test/semantic_error/parameter_save.f fable/test/semantic_error/real_declared_twice.f fable/test/semantic_error/recursion_in_declaration.f fable/test/semantic_error/sub_fun_2.f fable/test/semantic_error/subroutine_name_is_also_arg.f fable/test/semantic_error/twice_in_sub_args.f fable/test/semantic_error/unknown_intrinsic.f fable/test/semantic_error/write_end.f fable/test/semantic_error/write_without_unit.f fable/test/syntax_error/ fable/test/syntax_error/bad_after_dot.f fable/test/syntax_error/bad_and.f fable/test/syntax_error/bad_complex_literal_1.f fable/test/syntax_error/bad_complex_literal_2.f fable/test/syntax_error/bad_data.f fable/test/syntax_error/bad_false.f fable/test/syntax_error/bad_format_1.f fable/test/syntax_error/bad_format_2.f fable/test/syntax_error/bad_format_3.f fable/test/syntax_error/bad_format_4.f fable/test/syntax_error/bad_format_5.f fable/test/syntax_error/bad_format_6.f fable/test/syntax_error/bad_format_7.f fable/test/syntax_error/bad_gt.f fable/test/syntax_error/bad_implied_do_1.f fable/test/syntax_error/bad_implied_do_2.f fable/test/syntax_error/bad_implied_do_3.f fable/test/syntax_error/bad_implied_do_4.f fable/test/syntax_error/bad_implied_do_5.f fable/test/syntax_error/bad_implied_do_6.f fable/test/syntax_error/bad_not.f fable/test/syntax_error/bad_not_2.f fable/test/syntax_error/bad_open_err_label.f fable/test/syntax_error/bad_or.f fable/test/syntax_error/bad_true.f fable/test/syntax_error/bare_data.f fable/test/syntax_error/bare_external.f fable/test/syntax_error/bare_integer_i.f fable/test/syntax_error/bare_print.f fable/test/syntax_error/closing_parenthesis_without_matching.f fable/test/syntax_error/common_with_data_size.f fable/test/syntax_error/data_plus_repetition.f fable/test/syntax_error/dimension_with_data_size.f fable/test/syntax_error/dot_e.f fable/test/syntax_error/duplicate_format_label.f fable/test/syntax_error/exclamation_mark_syndrome.f fable/test/syntax_error/format_without_label.f fable/test/syntax_error/fun_star.f fable/test/syntax_error/j_assign_i_percent_5.f fable/test/syntax_error/label_cont_char.f fable/test/syntax_error/label_empty.f fable/test/syntax_error/not_an_identifier.f fable/test/syntax_error/opening_parenthesis_without_matching.f fable/test/syntax_error/power_no_base.f fable/test/syntax_error/power_no_exponent.f fable/test/syntax_error/read_plus_name.f fable/test/syntax_error/read_star_comma_empty.f fable/test/syntax_error/read_star_name.f fable/test/syntax_error/save_bad_comma.f fable/test/syntax_error/save_num_comma_colon.f fable/test/syntax_error/save_num_val_colon.f fable/test/syntax_error/save_slash_slash.f fable/test/syntax_error/save_with_dims.f fable/test/syntax_error/sub_bad_comma.f fable/test/syntax_error/sub_bad_trailing.f fable/test/syntax_error/sub_no_name.f fable/test/syntax_error/sub_open_parenthesis.f fable/test/syntax_error/sub_percent_3.f fable/test/syntax_error/x_assign_1dotd.f fable/test/syntax_error/x_assign_1ex.f fable/test/syntax_error/x_assign_dot.f fable/test/syntax_error/x_assign_dot_2.f fable/test/unsupported/ fable/test/unsupported/goto_into_loop.f fable/test/unsupported/hollerith_cont_lines.f fable/test/unsupported/hollerith_with_quotes.f fable/test/unsupported/parameter_pow.f fable/test/valid/ fable/test/valid/add_dp_integer.f fable/test/valid/add_real_integer.f fable/test/valid/add_reals.f fable/test/valid/add_strings.f fable/test/valid/arr_float_2.f fable/test/valid/array_origin.f fable/test/valid/assign_to_array_elements.f fable/test/valid/blockdata_named.f fable/test/valid/blockdata_unnamed.f fable/test/valid/character_1_array_passing.f fable/test/valid/character_1_f90.f fable/test/valid/character_function.f fable/test/valid/character_function_2.f fable/test/valid/character_function_3.f fable/test/valid/combine_decl_1.f fable/test/valid/comments.f fable/test/valid/common_0.f fable/test/valid/common_1.f fable/test/valid/common_2.f fable/test/valid/common_3.f fable/test/valid/common_4.f fable/test/valid/common_equivalence_1.f fable/test/valid/common_equivalence_2.f fable/test/valid/common_equivalence_3.f fable/test/valid/common_equivalence_4.f fable/test/valid/common_equivalence_5.f fable/test/valid/common_equivalence_simple_1.f fable/test/valid/common_equivalence_simple_2.f fable/test/valid/common_equivalence_simple_3.f fable/test/valid/common_equivalence_simple_4.f fable/test/valid/common_equivalence_simple_5.f fable/test/valid/common_equivalence_simple_6.f fable/test/valid/common_name_clash.f fable/test/valid/common_name_clash_2.f fable/test/valid/common_name_clash_3.f fable/test/valid/common_save_members.f fable/test/valid/common_variants.f fable/test/valid/commonymous.f fable/test/valid/const_analysis_1.f fable/test/valid/const_analysis_2.f fable/test/valid/const_expressions.f fable/test/valid/const_expressions_2.f fable/test/valid/conv_recipe.f fable/test/valid/cycle_exit.f fable/test/valid/data_01.f fable/test/valid/data_02.f fable/test/valid/data_03.f fable/test/valid/data_04.f fable/test/valid/data_05.f fable/test/valid/data_06.f fable/test/valid/data_07.f fable/test/valid/data_08.f fable/test/valid/data_09.f fable/test/valid/data_10.f fable/test/valid/data_11.f fable/test/valid/data_12.f fable/test/valid/data_13.f fable/test/valid/data_14.f fable/test/valid/data_15.f fable/test/valid/data_16.f fable/test/valid/data_17.f fable/test/valid/data_18.f fable/test/valid/data_19.f fable/test/valid/data_20.f fable/test/valid/data_21.f fable/test/valid/data_22.f fable/test/valid/data_23.f fable/test/valid/data_24.f fable/test/valid/data_25.f fable/test/valid/data_26.f fable/test/valid/data_27.f fable/test/valid/data_28.f fable/test/valid/data_29.f fable/test/valid/data_30.f fable/test/valid/data_31.f fable/test/valid/data_32.f fable/test/valid/data_byte.f fable/test/valid/data_double_from_double_and_float.f fable/test/valid/data_str_arr.f fable/test/valid/data_type_star.f fable/test/valid/data_types.f fable/test/valid/decl_before_if.f fable/test/valid/dependency_cycle.f fable/test/valid/dim_with_parameter.f fable/test/valid/dimensions.f fable/test/valid/do_enddo.f fable/test/valid/do_ix_num.f fable/test/valid/do_label.f fable/test/valid/do_variable_passed.f fable/test/valid/do_while.f fable/test/valid/doc_data_type_star.f fable/test/valid/double_literal.f fable/test/valid/dp_example.f fable/test/valid/dynamic_parameters_1.f fable/test/valid/dynamic_parameters_2.f fable/test/valid/dynamic_parameters_3.f fable/test/valid/dynamic_parameters_4.f fable/test/valid/dynamic_parameters_5.f fable/test/valid/entry_fun_1.f fable/test/valid/entry_fun_2.f fable/test/valid/entry_sub_1.f fable/test/valid/entry_sub_2.f fable/test/valid/equivalence_01.f fable/test/valid/equivalence_02.f fable/test/valid/equivalence_03.f fable/test/valid/equivalence_04.f fable/test/valid/equivalence_05.f fable/test/valid/equivalence_06.f fable/test/valid/equivalence_07.f fable/test/valid/equivalence_08.f fable/test/valid/equivalence_09.f fable/test/valid/equivalence_10.f fable/test/valid/equivalence_11.f fable/test/valid/equivalence_12.f fable/test/valid/equivalence_data.f fable/test/valid/equivalence_mixed.f fable/test/valid/equivalence_repeated.f fable/test/valid/external_arg_function.f fable/test/valid/external_arg_layers.f fable/test/valid/external_arg_non_const.f fable/test/valid/external_arg_pass_call.f fable/test/valid/external_arg_simple.f fable/test/valid/external_arg_subroutine.f fable/test/valid/f90_ne_token.f fable/test/valid/file_names_and_expected_cout fable/test/valid/flush_external.f fable/test/valid/flush_intrinsic.f fable/test/valid/format_escape.f fable/test/valid/format_nested.f fable/test/valid/format_quote_syndrome.f fable/test/valid/format_str_blank_str.f fable/test/valid/format_used_twice.f fable/test/valid/formats.f fable/test/valid/function_calls_with_its_name_as_arg.f fable/test/valid/function_data_type_in_body.f fable/test/valid/function_no_arg.f fable/test/valid/function_no_arg_with_common_in_expression.f fable/test/valid/function_two_returns_1.f fable/test/valid/function_two_returns_2.f fable/test/valid/function_write.f fable/test/valid/goto_computed.f fable/test/valid/goto_forms.f fable/test/valid/goto_last_do.f fable/test/valid/goto_spaghetti.f fable/test/valid/goto_target_before_else.f fable/test/valid/hexadecimal.f fable/test/valid/hollerith.f fable/test/valid/identifier_prefix.f fable/test/valid/if_arithmetic.f fable/test/valid/if_cond_if_arithmetic.f fable/test/valid/if_else_endif.f fable/test/valid/if_elseif_else_endif.f fable/test/valid/if_endif.f fable/test/valid/if_spaghetti.f fable/test/valid/if_write.f fable/test/valid/implicit_integer_a.f fable/test/valid/implicit_ranges.f fable/test/valid/implied_external_arg_sub.f fable/test/valid/implied_external_arg_sub_2.f fable/test/valid/implied_program.f fable/test/valid/implied_trailing_program.f fable/test/valid/inquire.f fable/test/valid/inquire_opened.f fable/test/valid/int_literal_eq_int_literal.f fable/test/valid/integer_star_2_array.f fable/test/valid/intrinsic_with_data_type.f fable/test/valid/intrinsics_extra.f fable/test/valid/intrinsics_iargc_getarg.f fable/test/valid/intrinsics_legacy.f fable/test/valid/label_format.f fable/test/valid/len_trim.f fable/test/valid/logical_a_or_b.f fable/test/valid/logical_ops.f fable/test/valid/long_lines.f fable/test/valid/main_cmn_indirect.f fable/test/valid/mod_integers.f fable/test/valid/open_chain.f fable/test/valid/open_write_read.f fable/test/valid/open_write_read_2.f fable/test/valid/ops.f fable/test/valid/parameter_for_arg_and_cmn_dim.f fable/test/valid/parameter_n.f fable/test/valid/parameter_save.f fable/test/valid/parameter_save_common.f fable/test/valid/parameters_2.f fable/test/valid/parameters_recursive.f fable/test/valid/parameters_recursive_2.f fable/test/valid/passing_arrays.f fable/test/valid/passing_arrays_2.f fable/test/valid/passing_strings.f fable/test/valid/power.f fable/test/valid/power_2.f fable/test/valid/print.f fable/test/valid/read_end.f fable/test/valid/read_end_empty.f fable/test/valid/read_end_err.f fable/test/valid/read_end_err_star_double.f fable/test/valid/read_err.f fable/test/valid/read_fmt_double.f fable/test/valid/read_fmt_past_end_of_line.f fable/test/valid/read_fmt_real.f fable/test/valid/read_fmt_slash.f fable/test/valid/read_fmt_string.f fable/test/valid/read_fmt_x.f fable/test/valid/read_format.f fable/test/valid/read_implied_do_1.f fable/test/valid/read_iostat_end_err_1.f fable/test/valid/read_iostat_end_err_2.f fable/test/valid/read_iostat_from_file.f fable/test/valid/read_iostat_from_string.f fable/test/valid/read_lines.f fable/test/valid/read_rec_iostat.f fable/test/valid/read_star.f fable/test/valid/read_star_empty.f fable/test/valid/read_star_integer.f fable/test/valid/read_star_print_star.f fable/test/valid/read_test_1.f fable/test/valid/read_test_1_iostat.f fable/test/valid/read_test_2.f fable/test/valid/read_test_3.f fable/test/valid/read_unformatted_str_arr.f fable/test/valid/real_array_sum.f fable/test/valid/recursive_subroutine.f fable/test/valid/rewind.f fable/test/valid/save_0.f fable/test/valid/save_1.f fable/test/valid/save_2.f fable/test/valid/save_3.f fable/test/valid/save_equivalence_1.f fable/test/valid/scopes_1.f fable/test/valid/scopes_2.f fable/test/valid/scopes_3.f fable/test/valid/scopes_4.f fable/test/valid/sf.f fable/test/valid/sign.f fable/test/valid/stop_bare.f fable/test/valid/stop_integer.f fable/test/valid/stop_string.f fable/test/valid/string_array.f fable/test/valid/string_array_declarations.f fable/test/valid/string_assign_to_slice.f fable/test/valid/string_common_dims.f fable/test/valid/string_compare.f fable/test/valid/string_concat.f fable/test/valid/string_spanning_continuation_lines.f fable/test/valid/string_sub_array_passing.f fable/test/valid/strings_size_dim.f fable/test/valid/strings_size_dim_data.f fable/test/valid/sub_fun_1.f fable/test/valid/sub_fun_3.f fable/test/valid/sub_nums_size_capacity.f fable/test/valid/sub_star.f fable/test/valid/subroutine_1.f fable/test/valid/subroutine_2.f fable/test/valid/subroutine_3.f fable/test/valid/subroutine_4.f fable/test/valid/subroutine_5.f fable/test/valid/subroutine_6.f fable/test/valid/subroutine_7.f fable/test/valid/subroutine_8.f fable/test/valid/subroutine_9.f fable/test/valid/subroutine_write_iunit.f fable/test/valid/subroutine_zero.f fable/test/valid/tab_syndrome.f fable/test/valid/triple_3d.f fable/test/valid/triple_3d_common.f fable/test/valid/unformatted_experiments.f fable/test/valid/unused_arg_implicit_none.f fable/test/valid/unused_args.f fable/test/valid/using_intrinsics.f fable/test/valid/write_1.f fable/test/valid/write_err.f fable/test/valid/write_extra_parentheses.f fable/test/valid/write_fmt_double.f fable/test/valid/write_format.f fable/test/valid/write_format_with_colon.f fable/test/valid/write_implied_do_1.f fable/test/valid/write_implied_do_2.f fable/test/valid/write_implied_do_3.f fable/test/valid/write_implied_do_4.f fable/test/valid/write_implied_do_5.f fable/test/valid/write_internal_file.f fable/test/valid/write_internal_file_2.f fable/test/valid/write_internal_file_3.f fable/test/valid/write_internal_file_4.f fable/test/valid/write_pow.f fable/test/valid/write_read_end_err_implied_do.f fable/test/valid/write_read_unformatted.f fable/test/valid/write_star.f fable/test/valid/write_star_real_star_4.f fable/test/valid/write_star_real_star_8.f iotbx/bioinformatics/test/alignment.pir iotbx/bioinformatics/test/ebi_blast.xml.gz iotbx/bioinformatics/test/ncbi_blast.xml.gz iotbx/ccp4_map/ccp4_20_21_22_to_30_40_50.ccp4 iotbx/examples/pdb_truncate_to_ala/crambin_pieces.pdb iotbx/examples/pdb_truncate_to_ala/resname_mix.pdb iotbx/examples/pdb_truncate_to_ala/tutorial.txt iotbx/examples/pdb_truncate_to_ala/v0_getting_started.py iotbx/examples/pdb_truncate_to_ala/v1_loop_over_atoms.py iotbx/examples/pdb_truncate_to_ala/v2_simple.py iotbx/examples/pdb_truncate_to_ala/v3_better.py iotbx/examples/pdb_truncate_to_ala/v4_with_bells_and_whistles.py iotbx/regression/data/ iotbx/regression/data/1yjp.pdb iotbx/regression/data/2ERL.pdb iotbx/regression/data/D7.ccp4 iotbx/regression/data/big_cube_model.pdb iotbx/regression/data/cu3182Isup2.hkl iotbx/regression/data/cu3182sup1.cif iotbx/regression/data/insulin_unmerged_cutted_from_ccp4.mtz iotbx/regression/data/mmma.ccp4 iotbx/regression/data/mmmab.ccp4 iotbx/regression/data/mmmb.ccp4 iotbx/regression/data/non_zero_origin_map.ccp4 iotbx/regression/data/non_zero_origin_model.cif iotbx/regression/data/non_zero_origin_model.pdb iotbx/regression/data/non_zero_origin_model_split.cif iotbx/regression/data/non_zero_origin_model_split.pdb iotbx/regression/data/non_zero_origin_ncs_model.cif iotbx/regression/data/non_zero_origin_ncs_model.pdb iotbx/regression/data/non_zero_origin_ncs_spec.ncs_spec iotbx/regression/data/pdb1zff.ent iotbx/regression/data/phaser_1.mtz iotbx/regression/data/shelx.ins iotbx/xds/tests/INTEGRATE.HKL iotbx/xds/tests/NEW_XPARM.XDS iotbx/xds/tests/XDS.INP iotbx/xds/tests/XDS_2.INP iotbx/xds/tests/XPARM.XDS libtbx/citations.params mmtbx/regression/pdbs/ mmtbx/regression/pdbs/1ucs_cutted_xyz_rounded.pdb mmtbx/regression/pdbs/AF_json_v3.cif mmtbx/regression/pdbs/AF_json_v3.pdb mmtbx/regression/pdbs/Fe_1brf_snip_reduced.pdb mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.cif mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.pdb mmtbx/regression/pdbs/ligand_before_prot.pdb mmtbx/regression/pdbs/one_chain_ligand_water.pdb mmtbx/regression/pdbs/p9.pdb mmtbx/regression/pdbs/pae.pdb mmtbx/regression/pdbs/pae_model.cif mmtbx/regression/pdbs/pae_model.pdb mmtbx/regression/pdbs/test1.cif mmtbx/regression/pdbs/two_chains_ligand_water.pdb rstbx/indexing/results2.dat rstbx/indexing/si_brief.dat rstbx/indexing/si_synthetic.dat scitbx/array_family/boost_python/regression_test.py scitbx/tests/differential_evolution.py scitbx/tests/direct_search_simulated_annealing.py scitbx/tests/golden_section_search.py scitbx/tests/simplex.py smtbx/regression/test_data/ smtbx/regression/test_data/sucrose_p1.res smtbx/regression/test_data/thpp.cif smtbx/regression/test_data/thpp.hkl smtbx/regression/test_data/thpp.ins sent 5,006,051 bytes received 8,847 bytes 2,005,959.20 bytes/sec total size is 4,944,463 speedup is 0.99 make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_install -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0//usr/lib/aarch64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libcbf-private.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libccp4io.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libomptbx.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/librstbx.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libspotfinder.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0//usr/lib/aarch64-linux-gnu/ install -m0755 -d debian/libcctbx-dev//usr cp --reflink=auto -a debian/tmp/usr/include/ debian/libcctbx-dev//usr/ install -m0755 -d debian/libcctbx-dev//usr/lib/aarch64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/aarch64-linux-gnu/libann_adaptor.so debian/tmp/usr/lib/aarch64-linux-gnu/libasymmetric_map.so debian/tmp/usr/lib/aarch64-linux-gnu/libcbf-private.so debian/tmp/usr/lib/aarch64-linux-gnu/libccp4io.so debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx.so debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so debian/tmp/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so debian/tmp/usr/lib/aarch64-linux-gnu/libomptbx.so debian/tmp/usr/lib/aarch64-linux-gnu/librstbx.so debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so debian/tmp/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so debian/tmp/usr/lib/aarch64-linux-gnu/libspotfinder.so debian/libcctbx-dev//usr/lib/aarch64-linux-gnu/ install -m0755 -d debian/python3-cctbx//usr cp --reflink=auto -a debian/tmp/usr/bin debian/python3-cctbx//usr/ install -m0755 -d debian/python3-cctbx//usr/lib cp --reflink=auto -a debian/tmp/usr/lib/cctbx debian/tmp/usr/lib/python3.12 debian/python3-cctbx//usr/lib/ dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/copyright debian/libcctbx0/usr/share/doc/libcctbx0/copyright install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/copyright debian/libcctbx-dev/usr/share/doc/libcctbx-dev/copyright install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/copyright debian/python3-cctbx/usr/share/doc/python3-cctbx/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/.debhelper/generated/python3-cctbx/dh_installchangelogs.dch.trimmed debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/.debhelper/generated/libcctbx0/dh_installchangelogs.dch.trimmed debian/libcctbx0/usr/share/doc/libcctbx0/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx0/usr/share/doc/libcctbx0/changelog install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/.debhelper/generated/libcctbx-dev/dh_installchangelogs.dch.trimmed debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20241024 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:166: skipping package libcctbx0 (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:166: skipping package libcctbx-dev (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:174: source=cctbx, binary packages=['python3-cctbx'] D: dh_python3 dh_python3:205: processing package python3-cctbx... D: dh_python3 fs:50: moving files from debian/python3-cctbx/usr/lib/python3.12/dist-packages to debian/python3-cctbx/usr/lib/python3/dist-packages/ D: dh_python3 tools:231: invoking: /usr/bin/python3.12 -c 'import sysconfig as s; print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python3 fs:421: renaming annlib_ext.so to annlib_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_connected_component_algorithm_ext.so to boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_graph_structure_comparison_ext.so to boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_python_streambuf_test_ext.so to boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_optional_ext.so to boost_optional_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_rational_ext.so to boost_rational_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cbflib_ext.so to cbflib_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_neutron_ext.so to cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_restraints_ext.so to cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_orientation_ext.so to cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_asu_ext.so to cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_translation_search_ext.so to cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cma_es_ext.so to cma_es_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_ext.so to dxtbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming fable_ext.so to fable_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_xplor_ext.so to iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_asa_ext.so to mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_shared_types_ext.so to mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_optimise_amplitudes_ext.so to mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming omptbx_ext.so to omptbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_ext.so to rstbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_indexing_api_ext.so to rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_graphics_utils_ext.so to scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lstbx_normal_equations_ext.so to scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_r3_utils_ext.so to scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_map_ext.so to scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_constraints_ext.so to smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_distltbx_ext.so to spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_hough_ext.so to spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming std_pair_ext.so to std_pair_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming regression_test_ext.so to regression_test_ext.cpython-312-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/sphinx.build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.absolute_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.segment_and_split_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.r_factor_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_cif_conversion): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_structure_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_r_factors_by_shell): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ribbons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_rotarama_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.matthews): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.emringer_score): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.water_b_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.validate_ligands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.qscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.electrons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numpy_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_qstat_counts): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.seconds_since_the_epoch): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.resource_monitor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.latex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_untested): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_pdb_mmcif_problems): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_install_script_bat): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_contains_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.symmetry_search): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.link_as_geometry_restraints_edits): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_miller_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.fem_include_search_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.plot_detector_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.dlsnxs2cbf): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.any2nexus): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.model_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.precession_view): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.multiplicity_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 fs:338: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.21.1.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-cctbx D: dh_python3 pydist:175: trying to find dependency for PIL (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for h5py (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for hdf5plugin (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for mrcfile (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for natsort (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for numpy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for nxmx (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for ordered_set (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pint (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for procrunner (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pymol (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for requests (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for scipy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for six (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for tqdm (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for wxPython (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-h5py (>= 3)', 'python3-scipy', 'python3 (<< 3.13)', 'python3-nxmx', 'python3-natsort', 'python3:any', 'python3-pint', 'python3-pil', 'python3-matplotlib', 'python3-pymol', 'python3-ordered-set', 'python3-hdf5plugin', 'python3-procrunner', 'python3-requests', 'python3-mrcfile', 'python3-tqdm', 'python3-six', 'python3-numpy', 'python3-wxgtk4.0', 'python3 (>= 3.12~)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/lintian/overrides install -p -m0644 debian/python3-cctbx.lintian-overrides debian/python3-cctbx/usr/share/lintian/overrides/python3-cctbx dh_perl -O--buildsystem=pybuild rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_link make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_auto_build -- -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" I: pybuild base:311: dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python3.12/include rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libann_adaptor.so ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libann_adaptor.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libasymmetric_map.so ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libasymmetric_map.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcbf-private.so ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcbf-private.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libccp4io.so ln -s libccp4io.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libccp4io.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx.so ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so ln -s libiotbx_pdb.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so ln -s libmmtbx_masks.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so ln -s libmmtbx_tls.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libomptbx.so ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libomptbx.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/librstbx.so ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/librstbx.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so ln -s libscitbx_slatec.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libspotfinder.so ln -s libspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libspotfinder.so install -m0755 -d debian/libcctbx-dev/usr/lib/cctbx/python3.12 rm -f debian/libcctbx-dev/usr/lib/cctbx/python3.12/include ln -s ../../../include/cctbx debian/libcctbx-dev/usr/lib/cctbx/python3.12/include make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_strip_nondeterminism -O--buildsystem=pybuild Using 1727806352 as canonical time Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ncbi_blast.xml.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip dh_compress -O--buildsystem=pybuild cd debian/python3-cctbx cd debian/libcctbx0 cd debian/libcctbx-dev chmod a-x usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian chmod a-x usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian chmod a-x usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian gzip -9nf usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian gzip -9nf usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian gzip -9nf usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_fixperms -O--buildsystem=pybuild find debian/libcctbx-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx0/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-cctbx/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cctbx/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-cctbx -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-cctbx/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug -- debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug -- debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-aarch64-linux-gnu.so objcopy --compress-debug-sections debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug chmod 0644 -- debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug objcopy --compress-debug-sections debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug chmod 0644 -- debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d0/93a72599e72d1bdbf1d1e767604a84bb3d30ed.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/ae024dcc1828014085472e70e8e99bb5af14eb.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d0/93a72599e72d1bdbf1d1e767604a84bb3d30ed.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/d0/93a72599e72d1bdbf1d1e767604a84bb3d30ed.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/79/3423c283c560fa772a79fcd1f28ff1ed542be5.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/79/3423c283c560fa772a79fcd1f28ff1ed542be5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/79/3423c283c560fa772a79fcd1f28ff1ed542be5.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/49 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/49/579703deca7907af7a2cf4eafba953180b79ce.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/ae024dcc1828014085472e70e8e99bb5af14eb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/ae024dcc1828014085472e70e8e99bb5af14eb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/49/579703deca7907af7a2cf4eafba953180b79ce.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/49/579703deca7907af7a2cf4eafba953180b79ce.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c4/9b4a115aa8d4f9e91cdbf625dd023f7f7b452c.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e/1ac401c9dc3dc9d8d229f4825e504a18b6a0ca.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c4/9b4a115aa8d4f9e91cdbf625dd023f7f7b452c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c4/9b4a115aa8d4f9e91cdbf625dd023f7f7b452c.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/20 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/20/8e4d177ede09c4b36edb4c0d763b5deaa5d32f.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/20/8e4d177ede09c4b36edb4c0d763b5deaa5d32f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/20/8e4d177ede09c4b36edb4c0d763b5deaa5d32f.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/28 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/28/5120d32ff017a5ec1424177ba33d1d3e10fd20.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/28/5120d32ff017a5ec1424177ba33d1d3e10fd20.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/28/5120d32ff017a5ec1424177ba33d1d3e10fd20.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b8/e2847fd03fd11469ddb5be8f97e49a3b952859.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b8/e2847fd03fd11469ddb5be8f97e49a3b952859.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b8/e2847fd03fd11469ddb5be8f97e49a3b952859.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/66/a1af5217ee2e5855df7e055aa708d7c69154c7.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/66/a1af5217ee2e5855df7e055aa708d7c69154c7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/66/a1af5217ee2e5855df7e055aa708d7c69154c7.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a1 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a1/001e3ea67f0488bc66708a455050b7e2ee43ed.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a1/001e3ea67f0488bc66708a455050b7e2ee43ed.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a1/001e3ea67f0488bc66708a455050b7e2ee43ed.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/64 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/64/dc2d2496246fc07e8e92d27213a60405648002.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/64/dc2d2496246fc07e8e92d27213a60405648002.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/64/dc2d2496246fc07e8e92d27213a60405648002.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/03/6fd4457e77e7c3d757cc083bf3ea3a7aadc6e9.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/03/6fd4457e77e7c3d757cc083bf3ea3a7aadc6e9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/03/6fd4457e77e7c3d757cc083bf3ea3a7aadc6e9.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/711d43ca4022d8ff40496f68eced4c3d0f3655.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/711d43ca4022d8ff40496f68eced4c3d0f3655.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/711d43ca4022d8ff40496f68eced4c3d0f3655.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ee/628c3078e93e328513b6c4eedfe8f0b150f9d9.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ee/628c3078e93e328513b6c4eedfe8f0b150f9d9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ee/628c3078e93e328513b6c4eedfe8f0b150f9d9.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dc/8fb4f563e5b1e3338d4884d9cd92b40fabb91a.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dc/8fb4f563e5b1e3338d4884d9cd92b40fabb91a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/dc/8fb4f563e5b1e3338d4884d9cd92b40fabb91a.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/76/d1ef0fe7d7b6a3b55eeaf5d840aca01eff9f4a.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/76/d1ef0fe7d7b6a3b55eeaf5d840aca01eff9f4a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/76/d1ef0fe7d7b6a3b55eeaf5d840aca01eff9f4a.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ba/3af46ffc80cd6edc8de91165297b9e39899518.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ba/3af46ffc80cd6edc8de91165297b9e39899518.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ba/3af46ffc80cd6edc8de91165297b9e39899518.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/6ba9011e74a2a2876cf9058f349bc6c9a79184.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/6ba9011e74a2a2876cf9058f349bc6c9a79184.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/6ba9011e74a2a2876cf9058f349bc6c9a79184.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a0/9667fe080ee8a0874b9c448222d0e2e3ea7aa2.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a0/9667fe080ee8a0874b9c448222d0e2e3ea7aa2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a0/9667fe080ee8a0874b9c448222d0e2e3ea7aa2.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c2/767dd73a5198bb3d9fbbc7783d2c434c01d432.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c2/767dd73a5198bb3d9fbbc7783d2c434c01d432.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/c2/767dd73a5198bb3d9fbbc7783d2c434c01d432.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libcctbx0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libcctbx0/usr/lib/debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc ln -s libcctbx0 debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc/libcctbx0-dbgsym install -m0755 -d debian/.debhelper/libcctbx0 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e/1ac401c9dc3dc9d8d229f4825e504a18b6a0ca.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e/1ac401c9dc3dc9d8d229f4825e504a18b6a0ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/e9c293e2cd016676366f36ebbeae7c4333a6ca.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/e9c293e2cd016676366f36ebbeae7c4333a6ca.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/e9c293e2cd016676366f36ebbeae7c4333a6ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/2e07be36de2ca546ee4c6eb1d343c850aa05e5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/2e07be36de2ca546ee4c6eb1d343c850aa05e5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/2e07be36de2ca546ee4c6eb1d343c850aa05e5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44/0c15a9f80a613dc37d21f5bd9bf26c3d92a300.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44/0c15a9f80a613dc37d21f5bd9bf26c3d92a300.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/44/0c15a9f80a613dc37d21f5bd9bf26c3d92a300.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/0c5d6e570ec1f881002531f138559e78ec9758.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/0c5d6e570ec1f881002531f138559e78ec9758.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/0c5d6e570ec1f881002531f138559e78ec9758.debug debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/87ad1387d9568e60823552eb64b772019995e9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/87ad1387d9568e60823552eb64b772019995e9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/87ad1387d9568e60823552eb64b772019995e9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/f1dfce75572969b998cac28e1e6f7c2e2c6109.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/f1dfce75572969b998cac28e1e6f7c2e2c6109.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/f1dfce75572969b998cac28e1e6f7c2e2c6109.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/fd3d6f2768b58adb088f47b5cbd9772c03f573.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/fd3d6f2768b58adb088f47b5cbd9772c03f573.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f6/fd3d6f2768b58adb088f47b5cbd9772c03f573.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a/9ebbc6bdfa4836ec7be45838069dd198be0f32.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a/9ebbc6bdfa4836ec7be45838069dd198be0f32.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a/9ebbc6bdfa4836ec7be45838069dd198be0f32.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/cbd26897460acef14cb86543c50a2a631ab536.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/cbd26897460acef14cb86543c50a2a631ab536.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/cbd26897460acef14cb86543c50a2a631ab536.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/7bffa17198c8844be487acdbc1c12a4000ca39.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/7bffa17198c8844be487acdbc1c12a4000ca39.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/7bffa17198c8844be487acdbc1c12a4000ca39.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/74f78e7b457ffdb6aad84c2ad5c5f6fdc1830c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/74f78e7b457ffdb6aad84c2ad5c5f6fdc1830c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/62/74f78e7b457ffdb6aad84c2ad5c5f6fdc1830c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/f7d01f18ece1ea08f6e908322aa4e32498cd18.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/f7d01f18ece1ea08f6e908322aa4e32498cd18.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/f7d01f18ece1ea08f6e908322aa4e32498cd18.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59/64244514244abf3290d7a6a2572991fa79cef4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59/64244514244abf3290d7a6a2572991fa79cef4.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59/64244514244abf3290d7a6a2572991fa79cef4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/8bd2e3a8f31bcb7287f6f9e8f73cebeee58ba0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/8bd2e3a8f31bcb7287f6f9e8f73cebeee58ba0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/aa/8bd2e3a8f31bcb7287f6f9e8f73cebeee58ba0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/cb4b744c3208181ed488ade850d7653f594657.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/cb4b744c3208181ed488ade850d7653f594657.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/cb4b744c3208181ed488ade850d7653f594657.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/bb9fd696db351aad3c71227fad69e046074a2a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/bb9fd696db351aad3c71227fad69e046074a2a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/41/bb9fd696db351aad3c71227fad69e046074a2a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/83eb3c2dfdc818b0dc6d8b7bd937c1b617c03d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/83eb3c2dfdc818b0dc6d8b7bd937c1b617c03d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/83eb3c2dfdc818b0dc6d8b7bd937c1b617c03d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/bb56a88226f8071de5fab931212eb3fb3d147b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/bb56a88226f8071de5fab931212eb3fb3d147b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/bb56a88226f8071de5fab931212eb3fb3d147b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/aa1126f02ec41828dde6c794f77caba8764bdb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/aa1126f02ec41828dde6c794f77caba8764bdb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/aa1126f02ec41828dde6c794f77caba8764bdb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/69a62b80cbe8138c771b088c180ac610c22131.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/69a62b80cbe8138c771b088c180ac610c22131.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/69a62b80cbe8138c771b088c180ac610c22131.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/0c4a55ad2155a1fbb67bd68acda913c8555868.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/0c4a55ad2155a1fbb67bd68acda913c8555868.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/0c4a55ad2155a1fbb67bd68acda913c8555868.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/815d8b52c9cbf773343e20590d4a579419ed92.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/815d8b52c9cbf773343e20590d4a579419ed92.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/815d8b52c9cbf773343e20590d4a579419ed92.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/ba9bcbf33c982a9d2f105d5fdae087c37add39.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/ba9bcbf33c982a9d2f105d5fdae087c37add39.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/ba9bcbf33c982a9d2f105d5fdae087c37add39.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/9b5bbf064710b1758bb04a90c4d1028f1c73d9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/9b5bbf064710b1758bb04a90c4d1028f1c73d9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/9b5bbf064710b1758bb04a90c4d1028f1c73d9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/15e5212687c02ab3d2d7f11ac07d9deb922bfa.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/15e5212687c02ab3d2d7f11ac07d9deb922bfa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/15e5212687c02ab3d2d7f11ac07d9deb922bfa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/f5306372082c9c12199e31484ca5f8c0c40625.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/f5306372082c9c12199e31484ca5f8c0c40625.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/f5306372082c9c12199e31484ca5f8c0c40625.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/45183f08df2191610660f8f679bdd2bd42c75b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/45183f08df2191610660f8f679bdd2bd42c75b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/45183f08df2191610660f8f679bdd2bd42c75b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/6f9268f523ac06434e7720668a165867975c77.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/6f9268f523ac06434e7720668a165867975c77.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/6f9268f523ac06434e7720668a165867975c77.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/9fd4ee8dc34660354b65c65bc6b15a17b53288.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/9fd4ee8dc34660354b65c65bc6b15a17b53288.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/9fd4ee8dc34660354b65c65bc6b15a17b53288.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66/d2799e190aecc574a5a9cd0b0f3e144dff9cca.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66/d2799e190aecc574a5a9cd0b0f3e144dff9cca.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/66/d2799e190aecc574a5a9cd0b0f3e144dff9cca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/0f1492e923a6fda82de04bb00faa77cb4336d1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/0f1492e923a6fda82de04bb00faa77cb4336d1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/0f1492e923a6fda82de04bb00faa77cb4336d1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/96afd5e3e1cc1b693c6c3389ad7204033e987e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/96afd5e3e1cc1b693c6c3389ad7204033e987e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/96afd5e3e1cc1b693c6c3389ad7204033e987e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/08fb03943c6f6b0727a0cd042f14d5fa2dba43.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/08fb03943c6f6b0727a0cd042f14d5fa2dba43.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/08fb03943c6f6b0727a0cd042f14d5fa2dba43.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c6/e4f1bff10eeecc5fcf5139badb82be17622fc2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c6/e4f1bff10eeecc5fcf5139badb82be17622fc2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c6/e4f1bff10eeecc5fcf5139badb82be17622fc2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/05691b556fbfa458e970a5e71648feff99fa18.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/05691b556fbfa458e970a5e71648feff99fa18.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/05691b556fbfa458e970a5e71648feff99fa18.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/ce9399689a6041a0b3c39a1bff7198cd6be579.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/ce9399689a6041a0b3c39a1bff7198cd6be579.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/ce9399689a6041a0b3c39a1bff7198cd6be579.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/539960372284a7f6c8d881e53422e7cb0d2c6e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/539960372284a7f6c8d881e53422e7cb0d2c6e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/539960372284a7f6c8d881e53422e7cb0d2c6e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/b335d94cb85b46d386955905e98f714902dc0a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/b335d94cb85b46d386955905e98f714902dc0a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/b335d94cb85b46d386955905e98f714902dc0a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/80e34936b9936fa7ae91be272f0922c65786d3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/80e34936b9936fa7ae91be272f0922c65786d3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/80e34936b9936fa7ae91be272f0922c65786d3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e/51e7272ee566dfe9c030588a9173ddf6e40ac1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e/51e7272ee566dfe9c030588a9173ddf6e40ac1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5e/51e7272ee566dfe9c030588a9173ddf6e40ac1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c/1047b4d75302f8112519d80151ca1bd1fed515.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c/1047b4d75302f8112519d80151ca1bd1fed515.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7c/1047b4d75302f8112519d80151ca1bd1fed515.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2fb813541fbd8f2ceafca71668ccceac1c3107.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2fb813541fbd8f2ceafca71668ccceac1c3107.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2fb813541fbd8f2ceafca71668ccceac1c3107.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/e00a04980241d01cf903475b7d80fed74fc3b0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/e00a04980241d01cf903475b7d80fed74fc3b0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/e00a04980241d01cf903475b7d80fed74fc3b0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e1/7cfde93436cab8ed7a4ad0cb094b9ea4a3135e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e1/7cfde93436cab8ed7a4ad0cb094b9ea4a3135e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e1/7cfde93436cab8ed7a4ad0cb094b9ea4a3135e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/dc881b3924a74298348beee8dfb02cb6d1f111.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/dc881b3924a74298348beee8dfb02cb6d1f111.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/dc881b3924a74298348beee8dfb02cb6d1f111.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d8328aeaf622b622d3e1182b0f0b0d387f4e4d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d8328aeaf622b622d3e1182b0f0b0d387f4e4d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c1/d8328aeaf622b622d3e1182b0f0b0d387f4e4d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/9e26b86e6f9ddddb1c789a95b727f8a16e6efc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/9e26b86e6f9ddddb1c789a95b727f8a16e6efc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/9e26b86e6f9ddddb1c789a95b727f8a16e6efc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/bb9ffe56dbf81473a33f841cbce3d1973ec503.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/bb9ffe56dbf81473a33f841cbce3d1973ec503.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69/bb9ffe56dbf81473a33f841cbce3d1973ec503.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/0256e55f635f778a92dd4dd1b25f4fc88fea6a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/0256e55f635f778a92dd4dd1b25f4fc88fea6a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/78/0256e55f635f778a92dd4dd1b25f4fc88fea6a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/dec4f822bdcc4a82d2a7bac7ecd1ace6fec0f7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/dec4f822bdcc4a82d2a7bac7ecd1ace6fec0f7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/dec4f822bdcc4a82d2a7bac7ecd1ace6fec0f7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/c017ebc2bb1c3d6abec1d7f19ad9eeee367fbe.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/c017ebc2bb1c3d6abec1d7f19ad9eeee367fbe.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/c017ebc2bb1c3d6abec1d7f19ad9eeee367fbe.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/06b7248fc409e844e6e18d03557c2b1f3b128d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/06b7248fc409e844e6e18d03557c2b1f3b128d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/06b7248fc409e844e6e18d03557c2b1f3b128d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/248f696bdd12b5cb09d22bb3ff28020f0727b9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/248f696bdd12b5cb09d22bb3ff28020f0727b9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/248f696bdd12b5cb09d22bb3ff28020f0727b9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/cd57a021d9c6374e39b7329471b5c83512ba5f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/cd57a021d9c6374e39b7329471b5c83512ba5f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/cd57a021d9c6374e39b7329471b5c83512ba5f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83/7228ba9299fee8682768cf937f68fce2375aa2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83/7228ba9299fee8682768cf937f68fce2375aa2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83/7228ba9299fee8682768cf937f68fce2375aa2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/c47069556f2da9799804c5b61a6c3469cb3b50.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/c47069556f2da9799804c5b61a6c3469cb3b50.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/c47069556f2da9799804c5b61a6c3469cb3b50.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/999d667ba366a75988f65de047fb0c0d696972.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/999d667ba366a75988f65de047fb0c0d696972.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/999d667ba366a75988f65de047fb0c0d696972.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/2a1759ab5e2ba5e73c504ca5bb5e9fdc6eca1f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/2a1759ab5e2ba5e73c504ca5bb5e9fdc6eca1f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/2a1759ab5e2ba5e73c504ca5bb5e9fdc6eca1f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/621a4058916b55e6137138591201614bb958b3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/621a4058916b55e6137138591201614bb958b3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/621a4058916b55e6137138591201614bb958b3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/05babebde4d699b27ce539bc6ac96c5c86c853.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/05babebde4d699b27ce539bc6ac96c5c86c853.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/05babebde4d699b27ce539bc6ac96c5c86c853.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/013c730cddbedf6c5b3d432e9df28b581cf049.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/013c730cddbedf6c5b3d432e9df28b581cf049.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/013c730cddbedf6c5b3d432e9df28b581cf049.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/32c3f254919e98b93476127ab4ba54f30c18d5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/32c3f254919e98b93476127ab4ba54f30c18d5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5c/32c3f254919e98b93476127ab4ba54f30c18d5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83/949b63951c912a92b2e4733ec31ebac2b4bb49.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83/949b63951c912a92b2e4733ec31ebac2b4bb49.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/83/949b63951c912a92b2e4733ec31ebac2b4bb49.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/387ff8d286e2055285739b4c02eeae6a23466d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/387ff8d286e2055285739b4c02eeae6a23466d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/46/387ff8d286e2055285739b4c02eeae6a23466d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/635f42f97ae727190794564e8512340a5c669a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/635f42f97ae727190794564e8512340a5c669a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/635f42f97ae727190794564e8512340a5c669a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/fa7226f560dc68c097ebb1673b178da9989818.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/fa7226f560dc68c097ebb1673b178da9989818.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/25/fa7226f560dc68c097ebb1673b178da9989818.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50/e1613df010e0a4c3613eccb799803e87cf844b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50/e1613df010e0a4c3613eccb799803e87cf844b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50/e1613df010e0a4c3613eccb799803e87cf844b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/65d8f2da919dbb53263c7959d6cb89416f6059.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/65d8f2da919dbb53263c7959d6cb89416f6059.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/65d8f2da919dbb53263c7959d6cb89416f6059.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/b30a7e6288aa2adb43f88f4afcde9992e8c5eb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/b30a7e6288aa2adb43f88f4afcde9992e8c5eb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec/b30a7e6288aa2adb43f88f4afcde9992e8c5eb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/46e7c9e43c0b6a285d486a3e1dcff474d7e3b2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/46e7c9e43c0b6a285d486a3e1dcff474d7e3b2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/46e7c9e43c0b6a285d486a3e1dcff474d7e3b2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/abb876db17603a127f8ed79bd454fa10c67f1f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/abb876db17603a127f8ed79bd454fa10c67f1f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/abb876db17603a127f8ed79bd454fa10c67f1f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/2ea3c81c5949b0537963e933bb901e872a0467.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/2ea3c81c5949b0537963e933bb901e872a0467.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/2ea3c81c5949b0537963e933bb901e872a0467.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/3e071b2acc2b5f9bcc30f77d4d04af7a5bf85b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/3e071b2acc2b5f9bcc30f77d4d04af7a5bf85b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dc/3e071b2acc2b5f9bcc30f77d4d04af7a5bf85b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/c551a5e2850850ae98fc863c64f76a030902e9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/c551a5e2850850ae98fc863c64f76a030902e9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/c551a5e2850850ae98fc863c64f76a030902e9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/56109271459a1426cfe872c8f573e9985ba370.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/56109271459a1426cfe872c8f573e9985ba370.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/56109271459a1426cfe872c8f573e9985ba370.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/cec9e20d0fb90f3298a025973125d8ae5370d9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/cec9e20d0fb90f3298a025973125d8ae5370d9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/cec9e20d0fb90f3298a025973125d8ae5370d9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a4d5e3b851c5e77fc4afec1f0290924842aa5a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a4d5e3b851c5e77fc4afec1f0290924842aa5a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/a4d5e3b851c5e77fc4afec1f0290924842aa5a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/49375b808e5caec9301c019a8cf7b80ff3b49b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/49375b808e5caec9301c019a8cf7b80ff3b49b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/49375b808e5caec9301c019a8cf7b80ff3b49b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/fd9e270eeb117f5be727c74f2de71325a7c0d6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/fd9e270eeb117f5be727c74f2de71325a7c0d6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/57/fd9e270eeb117f5be727c74f2de71325a7c0d6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/6aace267ed9f7837773d3d9dce3a273168ec7d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/6aace267ed9f7837773d3d9dce3a273168ec7d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/6aace267ed9f7837773d3d9dce3a273168ec7d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/47023ed6672eeca889edb1fc464c7ad3101930.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/47023ed6672eeca889edb1fc464c7ad3101930.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/47023ed6672eeca889edb1fc464c7ad3101930.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/37133282318589f3d1857c7f853681f4945bab.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/37133282318589f3d1857c7f853681f4945bab.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a9/37133282318589f3d1857c7f853681f4945bab.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/7d7c132600427ea266b0441e777ad9f595205f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/7d7c132600427ea266b0441e777ad9f595205f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/7d7c132600427ea266b0441e777ad9f595205f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/f2581d556a5b92fac74dced0778b2e9c1b0d29.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/f2581d556a5b92fac74dced0778b2e9c1b0d29.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/f2581d556a5b92fac74dced0778b2e9c1b0d29.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/d3f2f8650e7a3100f7e5af44f4cb8af874f08a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/d3f2f8650e7a3100f7e5af44f4cb8af874f08a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/d3f2f8650e7a3100f7e5af44f4cb8af874f08a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/a700e1a134dcd5308a2530121f828f73c64fd4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/a700e1a134dcd5308a2530121f828f73c64fd4.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/a700e1a134dcd5308a2530121f828f73c64fd4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/defa30236dc26b8fdea2ec2b67e4ee95b31b12.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/defa30236dc26b8fdea2ec2b67e4ee95b31b12.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16/defa30236dc26b8fdea2ec2b67e4ee95b31b12.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9d04fc19680c19a9dc91c91644eb83b3af1f5f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9d04fc19680c19a9dc91c91644eb83b3af1f5f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9d04fc19680c19a9dc91c91644eb83b3af1f5f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50/ec23bc0306b0526681fb27271c5e099989a014.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50/ec23bc0306b0526681fb27271c5e099989a014.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/50/ec23bc0306b0526681fb27271c5e099989a014.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/30f04199d6c84131e509dc0698a1aabee09e40.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/30f04199d6c84131e509dc0698a1aabee09e40.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/03/30f04199d6c84131e509dc0698a1aabee09e40.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67/6af647149d3164d2f4a802111f1e76584917dc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67/6af647149d3164d2f4a802111f1e76584917dc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/67/6af647149d3164d2f4a802111f1e76584917dc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/07cc139a7a1ea8983f181db9bf7a73864a30ad.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/07cc139a7a1ea8983f181db9bf7a73864a30ad.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/07cc139a7a1ea8983f181db9bf7a73864a30ad.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55/85e40b2aff1b760c7714809742cd63ee4b0ac2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55/85e40b2aff1b760c7714809742cd63ee4b0ac2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/55/85e40b2aff1b760c7714809742cd63ee4b0ac2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/6608fbc0ea8458362d1272a7921f425f775335.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/6608fbc0ea8458362d1272a7921f425f775335.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/95/6608fbc0ea8458362d1272a7921f425f775335.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/fc07968d08a44ce07e478b8c1473ea44d8cf42.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/fc07968d08a44ce07e478b8c1473ea44d8cf42.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/fc07968d08a44ce07e478b8c1473ea44d8cf42.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/2ca55f65ca919f83b6ef40ebd49c75d5597612.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/2ca55f65ca919f83b6ef40ebd49c75d5597612.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/2ca55f65ca919f83b6ef40ebd49c75d5597612.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/4e58e486ac2361021d98335646852d0f408aea.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/4e58e486ac2361021d98335646852d0f408aea.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/4e58e486ac2361021d98335646852d0f408aea.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/9c151ba661b826fe7e8be320f3446e3dc166e7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/9c151ba661b826fe7e8be320f3446e3dc166e7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/9c151ba661b826fe7e8be320f3446e3dc166e7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/262adbd13173409d06d4a7b5a6e089aef59bba.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/262adbd13173409d06d4a7b5a6e089aef59bba.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/262adbd13173409d06d4a7b5a6e089aef59bba.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/5833a9d0e57544f01680845f2f104f715213b8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/5833a9d0e57544f01680845f2f104f715213b8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/5833a9d0e57544f01680845f2f104f715213b8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/92f17d3af04f53c87318c0026fb6fd7dde432a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/92f17d3af04f53c87318c0026fb6fd7dde432a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/92f17d3af04f53c87318c0026fb6fd7dde432a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/48c727999cf32dcbe3eaad6f12ef3d5ccd471a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/48c727999cf32dcbe3eaad6f12ef3d5ccd471a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45/48c727999cf32dcbe3eaad6f12ef3d5ccd471a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/54a498b74665130811bcda250f25c8bdf39d71.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/54a498b74665130811bcda250f25c8bdf39d71.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/54a498b74665130811bcda250f25c8bdf39d71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/a9bf5a89c81d62f7b9d38248ec85dc3d032d0c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/a9bf5a89c81d62f7b9d38248ec85dc3d032d0c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3f/a9bf5a89c81d62f7b9d38248ec85dc3d032d0c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0/39fdba3a29c3bf2cd1100d8fde6b3acda0529a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0/39fdba3a29c3bf2cd1100d8fde6b3acda0529a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e0/39fdba3a29c3bf2cd1100d8fde6b3acda0529a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/c59dc37e08af5f363abab8958423ddc6ad9b72.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/c59dc37e08af5f363abab8958423ddc6ad9b72.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/c59dc37e08af5f363abab8958423ddc6ad9b72.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/a509d243a1a50fa32e62667be9a6126874596b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/a509d243a1a50fa32e62667be9a6126874596b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6d/a509d243a1a50fa32e62667be9a6126874596b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/415dbf4e5071714d4cac8366ab4cede67277ce.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/415dbf4e5071714d4cac8366ab4cede67277ce.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/415dbf4e5071714d4cac8366ab4cede67277ce.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/bae1bdc1fe409cf8f0a128912c72ae2cdcedac.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/bae1bdc1fe409cf8f0a128912c72ae2cdcedac.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/bae1bdc1fe409cf8f0a128912c72ae2cdcedac.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/4d53c405c4ac2e1cbb55904ecdea8a2bff217a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/4d53c405c4ac2e1cbb55904ecdea8a2bff217a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/4d53c405c4ac2e1cbb55904ecdea8a2bff217a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/85d670ffdc4f8a2603e724176f7380650dc921.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/85d670ffdc4f8a2603e724176f7380650dc921.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/85d670ffdc4f8a2603e724176f7380650dc921.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/52fd14350ba884394a51c366cf24e99cb83f28.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/52fd14350ba884394a51c366cf24e99cb83f28.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/52fd14350ba884394a51c366cf24e99cb83f28.debug debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/83e057c1379c30649330d03097586d26401363.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/83e057c1379c30649330d03097586d26401363.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/83e057c1379c30649330d03097586d26401363.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/361d2c44d47ae35f84e36ee0e1001e99052dc2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/361d2c44d47ae35f84e36ee0e1001e99052dc2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/361d2c44d47ae35f84e36ee0e1001e99052dc2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/c22615e03e4b31cfb8abecea4a8b1fe3c5f4b1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/c22615e03e4b31cfb8abecea4a8b1fe3c5f4b1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/c22615e03e4b31cfb8abecea4a8b1fe3c5f4b1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/a651c1997b277ebaefd2a996b394523663030b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/a651c1997b277ebaefd2a996b394523663030b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/a651c1997b277ebaefd2a996b394523663030b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e/d78f9b5ec525ca56680fae105ad3ffe19b7328.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e/d78f9b5ec525ca56680fae105ad3ffe19b7328.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8e/d78f9b5ec525ca56680fae105ad3ffe19b7328.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/dea7bc814bda0516a0483e1175c3fe77288334.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/dea7bc814bda0516a0483e1175c3fe77288334.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/dea7bc814bda0516a0483e1175c3fe77288334.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/7efc12f988181aa62474d93d93106434d68a3c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/7efc12f988181aa62474d93d93106434d68a3c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/92/7efc12f988181aa62474d93d93106434d68a3c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/c8bead37bed1f700d70d0cb7e3d81abb07098b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/c8bead37bed1f700d70d0cb7e3d81abb07098b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/c8bead37bed1f700d70d0cb7e3d81abb07098b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/79f99fea68c7c3c216e9eaf549161d046f0e88.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/79f99fea68c7c3c216e9eaf549161d046f0e88.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/79f99fea68c7c3c216e9eaf549161d046f0e88.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/22139cefc542fa4e1079641df45e04ef0cd9af.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/22139cefc542fa4e1079641df45e04ef0cd9af.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/47/22139cefc542fa4e1079641df45e04ef0cd9af.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/98b386d07566409cd5311a30e11d51819ef470.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/98b386d07566409cd5311a30e11d51819ef470.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/98b386d07566409cd5311a30e11d51819ef470.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/be48ba233386aa481cb4a78a29bf9f84cb0d3f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/be48ba233386aa481cb4a78a29bf9f84cb0d3f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fa/be48ba233386aa481cb4a78a29bf9f84cb0d3f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/c24c6ea531716dc5776390c5eaff4fae335e88.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/c24c6ea531716dc5776390c5eaff4fae335e88.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/c24c6ea531716dc5776390c5eaff4fae335e88.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/d0afccc8ccec2ece2c07f521126b6215f57d49.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/d0afccc8ccec2ece2c07f521126b6215f57d49.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/81/d0afccc8ccec2ece2c07f521126b6215f57d49.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/1f0a3feaf3384fe2d4a2e183ae31e8c7faca21.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/1f0a3feaf3384fe2d4a2e183ae31e8c7faca21.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/1f0a3feaf3384fe2d4a2e183ae31e8c7faca21.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/57c14ef3408fbba5038944f8cd3b713a071e33.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/57c14ef3408fbba5038944f8cd3b713a071e33.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ac/57c14ef3408fbba5038944f8cd3b713a071e33.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/c4595af9598c5bbfba0598683cddc938221b1f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/c4595af9598c5bbfba0598683cddc938221b1f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/c4595af9598c5bbfba0598683cddc938221b1f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/78e18ac9ee6ebae5e378d16f9cb554926eaa6d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/78e18ac9ee6ebae5e378d16f9cb554926eaa6d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/78e18ac9ee6ebae5e378d16f9cb554926eaa6d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/99e20f326861ac5d4baed6f6a63607b1ec9026.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/99e20f326861ac5d4baed6f6a63607b1ec9026.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/99e20f326861ac5d4baed6f6a63607b1ec9026.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/001c2ae9ce6e0efe97b4934af53a598936b55c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/001c2ae9ce6e0efe97b4934af53a598936b55c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2c/001c2ae9ce6e0efe97b4934af53a598936b55c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3d26ec2c9e8fad881257c0a721a9dfd43760fd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3d26ec2c9e8fad881257c0a721a9dfd43760fd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/3d26ec2c9e8fad881257c0a721a9dfd43760fd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/e85103848eacac3ceeeedda5918c60efb31243.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/e85103848eacac3ceeeedda5918c60efb31243.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/e85103848eacac3ceeeedda5918c60efb31243.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/69f0327acb62f6a5a449445c5fc3be5606e00a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/69f0327acb62f6a5a449445c5fc3be5606e00a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/69f0327acb62f6a5a449445c5fc3be5606e00a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/09a3fdddc9ad998efeebd8e57141d67ecfe01c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/09a3fdddc9ad998efeebd8e57141d67ecfe01c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/09a3fdddc9ad998efeebd8e57141d67ecfe01c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/95b81c247a90fccb766003b57e1110a5c8caf9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/95b81c247a90fccb766003b57e1110a5c8caf9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/95b81c247a90fccb766003b57e1110a5c8caf9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/d9bd239154e76614c93faef181d8d7ada717d7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/d9bd239154e76614c93faef181d8d7ada717d7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/89/d9bd239154e76614c93faef181d8d7ada717d7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/e826eb71d89e13486e93176fe9279dc72d499a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/e826eb71d89e13486e93176fe9279dc72d499a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ba/e826eb71d89e13486e93176fe9279dc72d499a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/6fcc451d04149b1bb6911b9df615c5502478b7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/6fcc451d04149b1bb6911b9df615c5502478b7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/6fcc451d04149b1bb6911b9df615c5502478b7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/a6227f6ba3a8ecd53a9b39bcbed57d5570e2d5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/a6227f6ba3a8ecd53a9b39bcbed57d5570e2d5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/39/a6227f6ba3a8ecd53a9b39bcbed57d5570e2d5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/ebb4577d60f2601ecf60a94567ba7fd8b31433.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/ebb4577d60f2601ecf60a94567ba7fd8b31433.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9c/ebb4577d60f2601ecf60a94567ba7fd8b31433.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59/c17dcc33c23656c5fea6ccb3b30e2a5ef85308.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59/c17dcc33c23656c5fea6ccb3b30e2a5ef85308.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/59/c17dcc33c23656c5fea6ccb3b30e2a5ef85308.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a/bb4d917e4dfd944ea5e9747e8e7b60d811dd0a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a/bb4d917e4dfd944ea5e9747e8e7b60d811dd0a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a/bb4d917e4dfd944ea5e9747e8e7b60d811dd0a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/3a965b5de21454d701a1c2ef928e8eee088a57.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/3a965b5de21454d701a1c2ef928e8eee088a57.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/24/3a965b5de21454d701a1c2ef928e8eee088a57.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/13007544127faa6f897396b9aa760d559e783d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/13007544127faa6f897396b9aa760d559e783d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/13007544127faa6f897396b9aa760d559e783d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/4c17605cadcce48542957cb786077bbc87952c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/4c17605cadcce48542957cb786077bbc87952c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/96/4c17605cadcce48542957cb786077bbc87952c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/6dee941a1e1ec5f3cd87fcf0fad6ea97a8f2f2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/6dee941a1e1ec5f3cd87fcf0fad6ea97a8f2f2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/6dee941a1e1ec5f3cd87fcf0fad6ea97a8f2f2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/23da5146bc9ddfbbcf127558676f183d89b2b3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/23da5146bc9ddfbbcf127558676f183d89b2b3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/23da5146bc9ddfbbcf127558676f183d89b2b3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/16ca46947d1a0c5dc55dd9c9b1e7d495b0469a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/16ca46947d1a0c5dc55dd9c9b1e7d495b0469a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b3/16ca46947d1a0c5dc55dd9c9b1e7d495b0469a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/771a8d6c34e6c480a6d51f4bd8e862ea20fc39.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/771a8d6c34e6c480a6d51f4bd8e862ea20fc39.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/771a8d6c34e6c480a6d51f4bd8e862ea20fc39.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/e55b2f0991847e728c5c978122c0b793ad5dca.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/e55b2f0991847e728c5c978122c0b793ad5dca.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/53/e55b2f0991847e728c5c978122c0b793ad5dca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/e0d6defac4746bcc5b145d7d415f136b3b84c5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/e0d6defac4746bcc5b145d7d415f136b3b84c5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/e0d6defac4746bcc5b145d7d415f136b3b84c5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/f0e9d36728b663c8e60bf2f2e91c8c6b1e6ba8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/f0e9d36728b663c8e60bf2f2e91c8c6b1e6ba8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9a/f0e9d36728b663c8e60bf2f2e91c8c6b1e6ba8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/9580cd6aedef8c809304600f9874a0d71d10a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/9580cd6aedef8c809304600f9874a0d71d10a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68/9580cd6aedef8c809304600f9874a0d71d10a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/e732bbd47209eb1332b47f8b370c9629d2745f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/e732bbd47209eb1332b47f8b370c9629d2745f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/eb/e732bbd47209eb1332b47f8b370c9629d2745f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/01ad30ec357b32aaf1969276dcaab36e686cae.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/01ad30ec357b32aaf1969276dcaab36e686cae.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/01ad30ec357b32aaf1969276dcaab36e686cae.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/a1b141b0b6e4a4f3a09fe05fb23b38e51fedc9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/a1b141b0b6e4a4f3a09fe05fb23b38e51fedc9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e3/a1b141b0b6e4a4f3a09fe05fb23b38e51fedc9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/70/f693f9fd8a1b625a29acc60060c584e148a242.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/70/f693f9fd8a1b625a29acc60060c584e148a242.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/70/f693f9fd8a1b625a29acc60060c584e148a242.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/4149408d97ba2996ff722b23bb339ec8e73793.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/4149408d97ba2996ff722b23bb339ec8e73793.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/4149408d97ba2996ff722b23bb339ec8e73793.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/4343a4593e058107a2b999029c27b53009b79b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/4343a4593e058107a2b999029c27b53009b79b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/4343a4593e058107a2b999029c27b53009b79b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/652d64ddd5cbd52505aaa7cc751cc02c1712d0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/652d64ddd5cbd52505aaa7cc751cc02c1712d0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/652d64ddd5cbd52505aaa7cc751cc02c1712d0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/9b99c5dc61a7876e1332f1bfec2694ac04096a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/9b99c5dc61a7876e1332f1bfec2694ac04096a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/9b99c5dc61a7876e1332f1bfec2694ac04096a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/b8896865400f95e448082f811c2b103052e801.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/b8896865400f95e448082f811c2b103052e801.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a1/b8896865400f95e448082f811c2b103052e801.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/8a29a49efdbb0cc74806129f03a3c926425565.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/8a29a49efdbb0cc74806129f03a3c926425565.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/8a29a49efdbb0cc74806129f03a3c926425565.debug debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/d62d5656af68e80c089ae3fc1a08fc98af2539.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/d62d5656af68e80c089ae3fc1a08fc98af2539.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/d62d5656af68e80c089ae3fc1a08fc98af2539.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a/b6a72b706974ff2ca6bbe7bcdfb633ab7b5d4e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a/b6a72b706974ff2ca6bbe7bcdfb633ab7b5d4e.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7a/b6a72b706974ff2ca6bbe7bcdfb633ab7b5d4e.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/db65e693ca7bbe647a08225854f075905b7cba.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/db65e693ca7bbe647a08225854f075905b7cba.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9e/db65e693ca7bbe647a08225854f075905b7cba.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/2a1ee0ec185b8030db89da77d128ac0342db7a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/2a1ee0ec185b8030db89da77d128ac0342db7a.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/2a1ee0ec185b8030db89da77d128ac0342db7a.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/3fe346fca6125bff810503aa9978caf5744bae.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/3fe346fca6125bff810503aa9978caf5744bae.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8a/3fe346fca6125bff810503aa9978caf5744bae.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/2713ea6c5203311a20f236c517d47068d0d871.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/2713ea6c5203311a20f236c517d47068d0d871.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/01/2713ea6c5203311a20f236c517d47068d0d871.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/2c279148e56217a39e8a2e957b3777340d96f8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/2c279148e56217a39e8a2e957b3777340d96f8.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/2c279148e56217a39e8a2e957b3777340d96f8.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/f357fab8cf2fe913e5017cabce13be750c605f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/f357fab8cf2fe913e5017cabce13be750c605f.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/f357fab8cf2fe913e5017cabce13be750c605f.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e669fdb1c06f3730cf91d1dd8ecd92c5bc359a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e669fdb1c06f3730cf91d1dd8ecd92c5bc359a.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/e669fdb1c06f3730cf91d1dd8ecd92c5bc359a.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/9ae3f07ef08a9e8ab5c60c1eb79fc3e1dd1627.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/9ae3f07ef08a9e8ab5c60c1eb79fc3e1dd1627.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/9ae3f07ef08a9e8ab5c60c1eb79fc3e1dd1627.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/13 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/13/ebfe92ea1be384a9503a47ede7ff40d64b060d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/13/ebfe92ea1be384a9503a47ede7ff40d64b060d.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/13/ebfe92ea1be384a9503a47ede7ff40d64b060d.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/9fe0c5dd629004de76776ca7f4197a812c3904.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/9fe0c5dd629004de76776ca7f4197a812c3904.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/9fe0c5dd629004de76776ca7f4197a812c3904.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22/32f095392a1691ac52ba4ca01fbf1bea611c27.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22/32f095392a1691ac52ba4ca01fbf1bea611c27.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22/32f095392a1691ac52ba4ca01fbf1bea611c27.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/bb684207a397e0ed8914e1dcffc3991d3f7149.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/bb684207a397e0ed8914e1dcffc3991d3f7149.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/bb684207a397e0ed8914e1dcffc3991d3f7149.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4f/9ee3ba2249e379d492bcb5421627627af3eb1e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4f/9ee3ba2249e379d492bcb5421627627af3eb1e.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4f/9ee3ba2249e379d492bcb5421627627af3eb1e.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/c753933a0fd818358e7b79ce5543b8297a3786.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/c753933a0fd818358e7b79ce5543b8297a3786.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/c753933a0fd818358e7b79ce5543b8297a3786.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e/b095e4f1c2b15cecb0d1b283fa95d1e31f8a41.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e/b095e4f1c2b15cecb0d1b283fa95d1e31f8a41.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6e/b095e4f1c2b15cecb0d1b283fa95d1e31f8a41.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0d4194365659ba9cdf981afc6175a46e2d507b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0d4194365659ba9cdf981afc6175a46e2d507b.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cd/0d4194365659ba9cdf981afc6175a46e2d507b.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/0b200d9dba975476fb32fd0491efa5d54201d3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/0b200d9dba975476fb32fd0491efa5d54201d3.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/93/0b200d9dba975476fb32fd0491efa5d54201d3.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/c16f34afe1d87920bdd588dea28ad22f4b5f77.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/c16f34afe1d87920bdd588dea28ad22f4b5f77.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/c16f34afe1d87920bdd588dea28ad22f4b5f77.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/6bf49cf065d9f43a804ccff6f33bea7a04630c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/6bf49cf065d9f43a804ccff6f33bea7a04630c.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/6bf49cf065d9f43a804ccff6f33bea7a04630c.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/4e7293c4c822abc51b4a0a7012bb09b94cd50d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/4e7293c4c822abc51b4a0a7012bb09b94cd50d.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/4e7293c4c822abc51b4a0a7012bb09b94cd50d.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/70016fabc4f3fa80925cf1718f2f9606cc00d4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/70016fabc4f3fa80925cf1718f2f9606cc00d4.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/70016fabc4f3fa80925cf1718f2f9606cc00d4.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/690317350438b4f10a5ac8e4c726e0936e9c33.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/690317350438b4f10a5ac8e4c726e0936e9c33.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a4/690317350438b4f10a5ac8e4c726e0936e9c33.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/cbb076213097271655f6200cc65ee0a50879dd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/cbb076213097271655f6200cc65ee0a50879dd.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/cbb076213097271655f6200cc65ee0a50879dd.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/df15306946bea01956efd32ab7f795668261a6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/df15306946bea01956efd32ab7f795668261a6.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/df15306946bea01956efd32ab7f795668261a6.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/c3511da0deb031ad749708997df18087b7a0c2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/c3511da0deb031ad749708997df18087b7a0c2.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c0/c3511da0deb031ad749708997df18087b7a0c2.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.find_distances debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/65bd1c9544ba30aea24a2f31e1d3686cad35e5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/65bd1c9544ba30aea24a2f31e1d3686cad35e5.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.find_distances objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/65bd1c9544ba30aea24a2f31e1d3686cad35e5.debug debian/python3-cctbx/usr/bin/cctbx.find_distances install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx_blobs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/01678278e73ca4c8d5f2a5d3b44eb039b8093e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/01678278e73ca4c8d5f2a5d3b44eb039b8093e.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx_blobs objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/19/01678278e73ca4c8d5f2a5d3b44eb039b8093e.debug debian/python3-cctbx/usr/bin/cctbx_blobs install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/166a74e1268a75665a8153dc1dacea9d34a465.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/166a74e1268a75665a8153dc1dacea9d34a465.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/166a74e1268a75665a8153dc1dacea9d34a465.debug debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73/ea4d7b9ba45d7481443d7b71b4532154b3813a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73/ea4d7b9ba45d7481443d7b71b4532154b3813a.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73/ea4d7b9ba45d7481443d7b71b4532154b3813a.debug debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.getting_started debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/793ba53cf0ceb837a8aa3b6674d677d76926e3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/793ba53cf0ceb837a8aa3b6674d677d76926e3.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.getting_started objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/28/793ba53cf0ceb837a8aa3b6674d677d76926e3.debug debian/python3-cctbx/usr/bin/cctbx.getting_started install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/357a4b1cadce17106e1821d799747c49412982.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/357a4b1cadce17106e1821d799747c49412982.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fb/357a4b1cadce17106e1821d799747c49412982.debug debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/fc1e6d22af9611a513ab4c573f0193cb3ceb88.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/fc1e6d22af9611a513ab4c573f0193cb3ceb88.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00/fc1e6d22af9611a513ab4c573f0193cb3ceb88.debug debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/36bfee171b980c51eb180c24de056731c38886.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/36bfee171b980c51eb180c24de056731c38886.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cbflib.tst_memory objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/36bfee171b980c51eb180c24de056731c38886.debug debian/python3-cctbx/usr/bin/cbflib.tst_memory install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-cctbx/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-cctbx/usr/lib/debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc ln -s python3-cctbx debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc/python3-cctbx-dbgsym install -m0755 -d debian/.debhelper/python3-cctbx dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/libcctbx0/DEBIAN/shlibs install -m0755 -d debian/libcctbx0/DEBIAN echo "libann_adaptor 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libasymmetric_map 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcbf-private 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libccp4io 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx_sgtbx_asu 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libdxtbxspotfinder 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_mtz 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_pdb 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_xplor 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_masks 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_tls 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libomptbx 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "librstbx 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_boost_python 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_minpack 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_slatec 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libsmtbx_refinement_constraints 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libspotfinder 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs chmod 0644 -- debian/libcctbx0/DEBIAN/shlibs mv debian/.debhelper/generated/libcctbx0/triggers.new debian/.debhelper/generated/libcctbx0/triggers rm -f debian/libcctbx-dev/DEBIAN/shlibs rm -f debian/python3-cctbx/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: symbol PyImport_ImportModule used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyRange_Type used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_NoneStruct used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_IsTrue used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries install -m0755 -d debian/python3-cctbx/DEBIAN dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cbflib.tst_memory dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 27 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_AsLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_New: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Next: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Next: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyByteArray_Type: it's probably a plugin dpkg-shlibdeps: warning: 128 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyCapsule_Type: it's probably a plugin dpkg-shlibdeps: warning: 49 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBytes_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_AsLong: it's probably a plugin dpkg-shlibdeps: warning: 34 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_ValueError: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_FromDoubles: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsTrue: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -p -m0644 debian/.debhelper/generated/libcctbx0/triggers debian/libcctbx0/DEBIAN/triggers install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/postinst cat debian/python3-cctbx.postinst.debhelper >> debian/python3-cctbx/DEBIAN/postinst chmod 0755 -- debian/python3-cctbx/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/prerm cat debian/python3-cctbx.prerm.debhelper >> debian/python3-cctbx/DEBIAN/prerm chmod 0755 -- debian/python3-cctbx/DEBIAN/prerm dh_numpy3 -O--buildsystem=pybuild mv debian/libcctbx0.substvars.new debian/libcctbx0.substvars mv debian/libcctbx-dev.substvars.new debian/libcctbx-dev.substvars mv debian/python3-cctbx.substvars.new debian/python3-cctbx.substvars dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/libcctbx-dev/DEBIAN echo misc:Depends= >> debian/libcctbx-dev.substvars echo misc:Pre-Depends= >> debian/libcctbx-dev.substvars dpkg-gencontrol -plibcctbx-dev -ldebian/changelog -Tdebian/libcctbx-dev.substvars -cdebian/control -Pdebian/libcctbx-dev install -m0755 -d debian/libcctbx0/DEBIAN echo misc:Depends= >> debian/libcctbx0.substvars echo misc:Pre-Depends= >> debian/libcctbx0.substvars install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym "-DDepends=libcctbx0 (= \${binary:Version})" "-DDescription=debug symbols for libcctbx0" "-DBuild-Ids=036fd4457e77e7c3d757cc083bf3ea3a7aadc6e9 116ba9011e74a2a2876cf9058f349bc6c9a79184 208e4d177ede09c4b36edb4c0d763b5deaa5d32f 285120d32ff017a5ec1424177ba33d1d3e10fd20 41711d43ca4022d8ff40496f68eced4c3d0f3655 49579703deca7907af7a2cf4eafba953180b79ce 64dc2d2496246fc07e8e92d27213a60405648002 66a1af5217ee2e5855df7e055aa708d7c69154c7 76d1ef0fe7d7b6a3b55eeaf5d840aca01eff9f4a 793423c283c560fa772a79fcd1f28ff1ed542be5 a09667fe080ee8a0874b9c448222d0e2e3ea7aa2 a1001e3ea67f0488bc66708a455050b7e2ee43ed b8e2847fd03fd11469ddb5be8f97e49a3b952859 ba3af46ffc80cd6edc8de91165297b9e39899518 c2767dd73a5198bb3d9fbbc7783d2c434c01d432 c49b4a115aa8d4f9e91cdbf625dd023f7f7b452c d093a72599e72d1bdbf1d1e767604a84bb3d30ed dc8fb4f563e5b1e3338d4884d9cd92b40fabb91a ee628c3078e93e328513b6c4eedfe8f0b150f9d9" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/python3-cctbx/DEBIAN echo misc:Depends= >> debian/python3-cctbx.substvars echo misc:Pre-Depends= >> debian/python3-cctbx.substvars install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/.debhelper/python3-cctbx/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cctbx-dbgsym "-DDepends=python3-cctbx (= \${binary:Version})" "-DDescription=debug symbols for python3-cctbx" "-DBuild-Ids=00b335d94cb85b46d386955905e98f714902dc0a 00fc1e6d22af9611a513ab4c573f0193cb3ceb88 012713ea6c5203311a20f236c517d47068d0d871 0306b7248fc409e844e6e18d03557c2b1f3b128d 0330f04199d6c84131e509dc0698a1aabee09e40 05e9c293e2cd016676366f36ebbeae7c4333a6ca 07262adbd13173409d06d4a7b5a6e089aef59bba 0783e057c1379c30649330d03097586d26401363 07e0d6defac4746bcc5b145d7d415f136b3b84c5 0d78e18ac9ee6ebae5e378d16f9cb554926eaa6d 0d80e34936b9936fa7ae91be272f0922c65786d3 0f13007544127faa6f897396b9aa760d559e783d 1299e20f326861ac5d4baed6f6a63607b1ec9026 13ebfe92ea1be384a9503a47ede7ff40d64b060d 15013c730cddbedf6c5b3d432e9df28b581cf049 16defa30236dc26b8fdea2ec2b67e4ee95b31b12 18a700e1a134dcd5308a2530121f828f73c64fd4 1901678278e73ca4c8d5f2a5d3b44eb039b8093e 191f0a3feaf3384fe2d4a2e183ae31e8c7faca21 1e54a498b74665130811bcda250f25c8bdf39d71 1e9c151ba661b826fe7e8be320f3446e3dc166e7 21361d2c44d47ae35f84e36ee0e1001e99052dc2 21999d667ba366a75988f65de047fb0c0d696972 2232f095392a1691ac52ba4ca01fbf1bea611c27 243a965b5de21454d701a1c2ef928e8eee088a57 2508fb03943c6f6b0727a0cd042f14d5fa2dba43 25fa7226f560dc68c097ebb1673b178da9989818 266f9268f523ac06434e7720668a165867975c77 2723da5146bc9ddfbbcf127558676f183d89b2b3 2756109271459a1426cfe872c8f573e9985ba370 279fd4ee8dc34660354b65c65bc6b15a17b53288 28793ba53cf0ceb837a8aa3b6674d677d76926e3 28f2581d556a5b92fac74dced0778b2e9c1b0d29 2905babebde4d699b27ce539bc6ac96c5c86c853 2a635f42f97ae727190794564e8512340a5c669a 2a83eb3c2dfdc818b0dc6d8b7bd937c1b617c03d 2b8a29a49efdbb0cc74806129f03a3c926425565 2c001c2ae9ce6e0efe97b4934af53a598936b55c 2c92f17d3af04f53c87318c0026fb6fd7dde432a 2de00a04980241d01cf903475b7d80fed74fc3b0 2ebb684207a397e0ed8914e1dcffc3991d3f7149 304d53c405c4ac2e1cbb55904ecdea8a2bff217a 319fe0c5dd629004de76776ca7f4197a812c3904 31c16f34afe1d87920bdd588dea28ad22f4b5f77 324e7293c4c822abc51b4a0a7012bb09b94cd50d 3436bfee171b980c51eb180c24de056731c38886 34c017ebc2bb1c3d6abec1d7f19ad9eeee367fbe 3607cc139a7a1ea8983f181db9bf7a73864a30ad 3969f0327acb62f6a5a449445c5fc3be5606e00a 399e26b86e6f9ddddb1c789a95b727f8a16e6efc 39a6227f6ba3a8ecd53a9b39bcbed57d5570e2d5 3a539960372284a7f6c8d881e53422e7cb0d2c6e 3a6dee941a1e1ec5f3cd87fcf0fad6ea97a8f2f2 3ef5306372082c9c12199e31484ca5f8c0c40625 3f7bffa17198c8844be487acdbc1c12a4000ca39 3fa9bf5a89c81d62f7b9d38248ec85dc3d032d0c 41bb9fd696db351aad3c71227fad69e046074a2a 41f7d01f18ece1ea08f6e908322aa4e32498cd18 440c15a9f80a613dc37d21f5bd9bf26c3d92a300 4548c727999cf32dcbe3eaad6f12ef3d5ccd471a 45c551a5e2850850ae98fc863c64f76a030902e9 46387ff8d286e2055285739b4c02eeae6a23466d 46cbd26897460acef14cb86543c50a2a631ab536 4722139cefc542fa4e1079641df45e04ef0cd9af 4949375b808e5caec9301c019a8cf7b80ff3b49b 4a05691b556fbfa458e970a5e71648feff99fa18 4d01ad30ec357b32aaf1969276dcaab36e686cae 4f9ee3ba2249e379d492bcb5421627627af3eb1e 50e1613df010e0a4c3613eccb799803e87cf844b 50ec23bc0306b0526681fb27271c5e099989a014 53e55b2f0991847e728c5c978122c0b793ad5dca 542a1759ab5e2ba5e73c504ca5bb5e9fdc6eca1f 5585e40b2aff1b760c7714809742cd63ee4b0ac2 56bb56a88226f8071de5fab931212eb3fb3d147b 57815d8b52c9cbf773343e20590d4a579419ed92 57fd9e270eeb117f5be727c74f2de71325a7c0d6 58f1dfce75572969b998cac28e1e6f7c2e2c6109 5964244514244abf3290d7a6a2572991fa79cef4 59c17dcc33c23656c5fea6ccb3b30e2a5ef85308 5abb4d917e4dfd944ea5e9747e8e7b60d811dd0a 5c32c3f254919e98b93476127ab4ba54f30c18d5 5e51e7272ee566dfe9c030588a9173ddf6e40ac1 6274f78e7b457ffdb6aad84c2ad5c5f6fdc1830c 62ae024dcc1828014085472e70e8e99bb5af14eb 66d2799e190aecc574a5a9cd0b0f3e144dff9cca 676af647149d3164d2f4a802111f1e76584917dc 689580cd6aedef8c809304600f9874a0d71d10a9 68c4595af9598c5bbfba0598683cddc938221b1f 68cb4b744c3208181ed488ade850d7653f594657 69bb9ffe56dbf81473a33f841cbce3d1973ec503 6a6fcc451d04149b1bb6911b9df615c5502478b7 6ba4d5e3b851c5e77fc4afec1f0290924842aa5a 6caa1126f02ec41828dde6c794f77caba8764bdb 6da509d243a1a50fa32e62667be9a6126874596b 6dfc07968d08a44ce07e478b8c1473ea44d8cf42 6e1ac401c9dc3dc9d8d229f4825e504a18b6a0ca 6eb095e4f1c2b15cecb0d1b283fa95d1e31f8a41 70f693f9fd8a1b625a29acc60060c584e148a242 72248f696bdd12b5cb09d22bb3ff28020f0727b9 73ea4d7b9ba45d7481443d7b71b4532154b3813a 780256e55f635f778a92dd4dd1b25f4fc88fea6a 79c47069556f2da9799804c5b61a6c3469cb3b50 79dea7bc814bda0516a0483e1175c3fe77288334 7a9ebbc6bdfa4836ec7be45838069dd198be0f32 7ab6a72b706974ff2ca6bbe7bcdfb633ab7b5d4e 7c1047b4d75302f8112519d80151ca1bd1fed515 816aace267ed9f7837773d3d9dce3a273168ec7d 81d0afccc8ccec2ece2c07f521126b6215f57d49 81dc881b3924a74298348beee8dfb02cb6d1f111 82cd57a021d9c6374e39b7329471b5c83512ba5f 837228ba9299fee8682768cf937f68fce2375aa2 83949b63951c912a92b2e4733ec31ebac2b4bb49 85c24c6ea531716dc5776390c5eaff4fae335e88 89d9bd239154e76614c93faef181d8d7ada717d7 8a3fe346fca6125bff810503aa9978caf5744bae 8a52fd14350ba884394a51c366cf24e99cb83f28 8a87ad1387d9568e60823552eb64b772019995e9 8adec4f822bdcc4a82d2a7bac7ecd1ace6fec0f7 8ed78f9b5ec525ca56680fae105ad3ffe19b7328 8fcbb076213097271655f6200cc65ee0a50879dd 9265d8f2da919dbb53263c7959d6cb89416f6059 927efc12f988181aa62474d93d93106434d68a3c 930b200d9dba975476fb32fd0491efa5d54201d3 930c5d6e570ec1f881002531f138559e78ec9758 939b5bbf064710b1758bb04a90c4d1028f1c73d9 956608fbc0ea8458362d1272a7921f425f775335 964c17605cadcce48542957cb786077bbc87952c 964e58e486ac2361021d98335646852d0f408aea 96ce9399689a6041a0b3c39a1bff7198cd6be579 9af0e9d36728b663c8e60bf2f2e91c8c6b1e6ba8 9c69a62b80cbe8138c771b088c180ac610c22131 9cebb4577d60f2601ecf60a94567ba7fd8b31433 9ea651c1997b277ebaefd2a996b394523663030b 9ecec9e20d0fb90f3298a025973125d8ae5370d9 9edb65e693ca7bbe647a08225854f075905b7cba 9f96afd5e3e1cc1b693c6c3389ad7204033e987e a0e669fdb1c06f3730cf91d1dd8ecd92c5bc359a a10c4a55ad2155a1fbb67bd68acda913c8555868 a1b8896865400f95e448082f811c2b103052e801 a209a3fdddc9ad998efeebd8e57141d67ecfe01c a22c279148e56217a39e8a2e957b3777340d96f8 a415e5212687c02ab3d2d7f11ac07d9deb922bfa a4690317350438b4f10a5ac8e4c726e0936e9c33 a5166a74e1268a75665a8153dc1dacea9d34a465 a64149408d97ba2996ff722b23bb339ec8e73793 a6771a8d6c34e6c480a6d51f4bd8e862ea20fc39 a937133282318589f3d1857c7f853681f4945bab aa8bd2e3a8f31bcb7287f6f9e8f73cebeee58ba0 ac57c14ef3408fbba5038944f8cd3b713a071e33 aedf15306946bea01956efd32ab7f795668261a6 b316ca46947d1a0c5dc55dd9c9b1e7d495b0469a b347023ed6672eeca889edb1fc464c7ad3101930 b479f99fea68c7c3c216e9eaf549161d046f0e88 b5ba9bcbf33c982a9d2f105d5fdae087c37add39 b76bf49cf065d9f43a804ccff6f33bea7a04630c b77d7c132600427ea266b0441e777ad9f595205f b8c22615e03e4b31cfb8abecea4a8b1fe3c5f4b1 b93d26ec2c9e8fad881257c0a721a9dfd43760fd bae826eb71d89e13486e93176fe9279dc72d499a be9d04fc19680c19a9dc91c91644eb83b3af1f5f bf98b386d07566409cd5311a30e11d51819ef470 bfbae1bdc1fe409cf8f0a128912c72ae2cdcedac c09ae3f07ef08a9e8ab5c60c1eb79fc3e1dd1627 c09b99c5dc61a7876e1332f1bfec2694ac04096a c0c3511da0deb031ad749708997df18087b7a0c2 c1d8328aeaf622b622d3e1182b0f0b0d387f4e4d c52e07be36de2ca546ee4c6eb1d343c850aa05e5 c565bd1c9544ba30aea24a2f31e1d3686cad35e5 c6e4f1bff10eeecc5fcf5139badb82be17622fc2 c72fb813541fbd8f2ceafca71668ccceac1c3107 c7652d64ddd5cbd52505aaa7cc751cc02c1712d0 c7abb876db17603a127f8ed79bd454fa10c67f1f cd0d4194365659ba9cdf981afc6175a46e2d507b cf45183f08df2191610660f8f679bdd2bd42c75b d285d670ffdc4f8a2603e724176f7380650dc921 d570016fabc4f3fa80925cf1718f2f9606cc00d4 d5c59dc37e08af5f363abab8958423ddc6ad9b72 d72ca55f65ca919f83b6ef40ebd49c75d5597612 d8d62d5656af68e80c089ae3fc1a08fc98af2539 dc3e071b2acc2b5f9bcc30f77d4d04af7a5bf85b dc46e7c9e43c0b6a285d486a3e1dcff474d7e3b2 dd415dbf4e5071714d4cac8366ab4cede67277ce dd4343a4593e058107a2b999029c27b53009b79b ded3f2f8650e7a3100f7e5af44f4cb8af874f08a e039fdba3a29c3bf2cd1100d8fde6b3acda0529a e17cfde93436cab8ed7a4ad0cb094b9ea4a3135e e3a1b141b0b6e4a4f3a09fe05fb23b38e51fedc9 e7c753933a0fd818358e7b79ce5543b8297a3786 ea0f1492e923a6fda82de04bb00faa77cb4336d1 eae85103848eacac3ceeeedda5918c60efb31243 ebe732bbd47209eb1332b47f8b370c9629d2745f ecb30a7e6288aa2adb43f88f4afcde9992e8c5eb f05833a9d0e57544f01680845f2f104f715213b8 f5621a4058916b55e6137138591201614bb958b3 f6fd3d6f2768b58adb088f47b5cbd9772c03f573 f995b81c247a90fccb766003b57e1110a5c8caf9 fa2ea3c81c5949b0537963e933bb901e872a0467 fabe48ba233386aa481cb4a78a29bf9f84cb0d3f fb357a4b1cadce17106e1821d799747c49412982 fbc8bead37bed1f700d70d0cb7e3d81abb07098b fcf357fab8cf2fe913e5017cabce13be750c605f fe2a1ee0ec185b8030db89da77d128ac0342db7a" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package libcctbx0: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/libcctbx0 dpkg-gencontrol: warning: package libcctbx-dev: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/libcctbx-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/python3-cctbx dpkg-gencontrol: warning: package libcctbx0: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/libcctbx0/DEBIAN/control chmod 0644 -- debian/python3-cctbx/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN install -m0755 -d debian/libcctbx-dev/DEBIAN cd debian/libcctbx0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcctbx-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-cctbx >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN chmod 0644 -- debian/libcctbx-dev/DEBIAN/md5sums cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python3-cctbx/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN cd debian/.debhelper/python3-cctbx/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/libcctbx0 .. dpkg-deb --root-owner-group --build debian/.debhelper/libcctbx0/dbgsym-root .. dpkg-deb --root-owner-group --build debian/libcctbx-dev .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-cctbx/dbgsym-root .. dpkg-deb --root-owner-group --build debian/python3-cctbx .. dpkg-deb: building package 'libcctbx0' in '../libcctbx0_2024.8+ds2+~3.21.1+ds1-3_arm64.deb'. dpkg-deb: building package 'libcctbx-dev' in '../libcctbx-dev_2024.8+ds2+~3.21.1+ds1-3_arm64.deb'. dpkg-deb: building package 'libcctbx0-dbgsym' in '../libcctbx0-dbgsym_2024.8+ds2+~3.21.1+ds1-3_arm64.deb'. dpkg-deb: building package 'python3-cctbx-dbgsym' in '../python3-cctbx-dbgsym_2024.8+ds2+~3.21.1+ds1-3_arm64.deb'. dpkg-deb: building package 'python3-cctbx' in '../python3-cctbx_2024.8+ds2+~3.21.1+ds1-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../cctbx_2024.8+ds2+~3.21.1+ds1-3_arm64.buildinfo dpkg-genchanges --build=binary -O../cctbx_2024.8+ds2+~3.21.1+ds1-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2343100/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2343100 and its subdirectories I: Current time: Wed Dec 10 16:25:04 +14 2025 I: pbuilder-time-stamp: 1765333504