I: pbuilder: network access will be disabled during build
I: Current time: Sun Mar 16 03:08:17 +14 2025
I: pbuilder-time-stamp: 1742044097
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [seqan-raptor_3.0.1+ds-9.dsc]
I: copying [./seqan-raptor_3.0.1+ds.orig.tar.xz]
I: copying [./seqan-raptor_3.0.1+ds-9.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./seqan-raptor_3.0.1+ds-9.dsc: unsupported subcommand
dpkg-source: info: extracting seqan-raptor in seqan-raptor-3.0.1+ds
dpkg-source: info: unpacking seqan-raptor_3.0.1+ds.orig.tar.xz
dpkg-source: info: unpacking seqan-raptor_3.0.1+ds-9.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying privacy
dpkg-source: info: applying chopper_no_test
dpkg-source: info: applying debian_seqan3
dpkg-source: info: applying debian_xxhash
dpkg-source: info: applying debian_cppreference
dpkg-source: info: applying doxygen_update
dpkg-source: info: applying debian_seqan340
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/D01_modify_environment starting
debug: Running on ionos1-amd64.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 Mar 15 13:08 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
  BASH_VERSION='5.2.37(1)-release'
  BUILDDIR=/build/reproducible-path
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=amd64
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
  DIRSTACK=()
  DISTRIBUTION=trixie
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=x86_64
  HOST_ARCH=amd64
  IFS=' 	
  '
  INVOCATION_ID=603d7dd1467e458996b1ee73fbd640c7
  LANG=C
  LANGUAGE=et_EE:et
  LC_ALL=C
  MACHTYPE=x86_64-pc-linux-gnu
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnu
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=351269
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.MDZ537T0/pbuilderrc_cVr7 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.MDZ537T0/b2 --logfile b2/build.log seqan-raptor_3.0.1+ds-9.dsc'
  SUDO_GID=110
  SUDO_UID=105
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://46.16.76.132:3128
I: uname -a
  Linux i-capture-the-hostname 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Mar  4 11:20 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), architecture-is-little-endian, architecture-is-64-bit, cmake, libseqan3-dev (>= 3.4.0~rc.3), libgtest-dev, libxxhash-dev, libcereal-dev, libsimde-dev, libyaml-cpp-dev, pkgconf, doxygen, cppreference-doc-en-html, texlive-font-utils, texlive-latex-base, texlive-latex-recommended, texlive-latex-extra, texlive-plain-generic, texlive-fonts-recommended, ghostscript
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19803 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on architecture-is-little-endian; however:
  Package architecture-is-little-endian is not installed.
 pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however:
  Package architecture-is-64-bit is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on libseqan3-dev (>= 3.4.0~rc.3); however:
  Package libseqan3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libgtest-dev; however:
  Package libgtest-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxxhash-dev; however:
  Package libxxhash-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libcereal-dev; however:
  Package libcereal-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libsimde-dev; however:
  Package libsimde-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libyaml-cpp-dev; however:
  Package libyaml-cpp-dev is not installed.
 pbuilder-satisfydepends-dummy depends on pkgconf; however:
  Package pkgconf is not installed.
 pbuilder-satisfydepends-dummy depends on doxygen; however:
  Package doxygen is not installed.
 pbuilder-satisfydepends-dummy depends on cppreference-doc-en-html; however:
  Package cppreference-doc-en-html is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-font-utils; however:
  Package texlive-font-utils is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-base; however:
  Package texlive-latex-base is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however:
  Package texlive-latex-recommended is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however:
  Package texlive-latex-extra is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however:
  Package texlive-plain-generic is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however:
  Package texlive-fonts-recommended is not installed.
 pbuilder-satisfydepends-dummy depends on ghostscript; however:
  Package ghostscript is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  architecture-properties{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} cppreference-doc-en-html{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} googletest{a} groff-base{a} intltool-debian{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libcereal-dev{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl4t64{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libglib2.0-0t64{a} libgnutls30t64{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libgtest-dev{a} libharfbuzz0b{a} libice6{a} libicu72{a} libidn12{a} libidn2-0{a} libijs-0.35{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblcms2-2{a} libldap2{a} liblerc4{a} libllvm19{a} libmagic-mgc{a} libmagic1t64{a} libmpfi0{a} libnghttp2-14{a} libnghttp3-9{a} libopenjp2-7{a} libp11-kit0{a} libpaper-utils{a} libpaper2{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl5t64{a} libptexenc1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libseqan3-dev{a} libsharpyuv0{a} libsimde-dev{a} libsm6{a} libssh2-1t64{a} libsynctex2{a} libtasn1-6{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libxxhash-dev{a} libyaml-cpp-dev{a} libyaml-cpp0.8{a} libz3-4{a} libzzip-0-13t64{a} lynx{a} lynx-common{a} m4{a} man-db{a} media-types{a} netbase{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3.13{a} python3.13-minimal{a} rapidjson-dev{a} readline-common{a} sensible-utils{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-font-utils{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bzip2-doc ca-certificates dbus default-jre dvisvgm fonts-droid-fallback krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libspreadsheet-parseexcel-perl libx11-protocol-perl linux-sysctl-defaults lmodern mailcap ps2eps psmisc publicsuffix ruby shared-mime-info tex-gyre tipa tk x11-utils x11-xserver-utils xdg-user-dirs 
0 packages upgraded, 183 newly installed, 0 to remove and 0 not upgraded.
Need to get 279 MB of archives. After unpacking 1172 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian trixie/main amd64 poppler-data all 0.4.12-1 [1601 kB]
Get: 2 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB]
Get: 3 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 4 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB]
Get: 5 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB]
Get: 6 http://deb.debian.org/debian trixie/main amd64 media-types all 13.0.0 [29.3 kB]
Get: 7 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB]
Get: 8 http://deb.debian.org/debian trixie/main amd64 tzdata all 2025a-2 [259 kB]
Get: 9 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 10 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 11 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 12 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB]
Get: 13 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.2-1 [745 kB]
Get: 14 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB]
Get: 15 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.2-2 [28.1 kB]
Get: 16 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get: 17 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get: 18 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 19 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 20 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 21 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 22 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 23 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 24 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 25 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB]
Get: 26 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 27 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 28 http://deb.debian.org/debian trixie/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B]
Get: 29 http://deb.debian.org/debian trixie/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get: 30 http://deb.debian.org/debian trixie/main amd64 ucf all 3.0050 [42.7 kB]
Get: 31 http://deb.debian.org/debian trixie/main amd64 architecture-properties amd64 0.2.6 [2336 B]
Get: 32 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB]
Get: 33 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB]
Get: 34 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 35 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-3 [862 kB]
Get: 36 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 37 http://deb.debian.org/debian trixie/main amd64 cmake-data all 3.31.6-1 [2268 kB]
Get: 38 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get: 39 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB]
Get: 40 http://deb.debian.org/debian trixie/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB]
Get: 41 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get: 42 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB]
Get: 43 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB]
Get: 44 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB]
Get: 45 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 46 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB]
Get: 47 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB]
Get: 48 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 49 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.8-1 [109 kB]
Get: 50 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB]
Get: 51 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB]
Get: 52 http://deb.debian.org/debian trixie/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB]
Get: 53 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 54 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB]
Get: 55 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 56 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get: 57 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get: 58 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get: 59 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 60 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 61 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.12.1-3 [369 kB]
Get: 62 http://deb.debian.org/debian trixie/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB]
Get: 63 http://deb.debian.org/debian trixie/main amd64 librhash1 amd64 1.4.5-1 [132 kB]
Get: 64 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB]
Get: 65 http://deb.debian.org/debian trixie/main amd64 cmake amd64 3.31.6-1 [12.0 MB]
Get: 66 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 67 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 68 http://deb.debian.org/debian trixie/main amd64 lynx-common all 2.9.2-1 [1193 kB]
Get: 69 http://deb.debian.org/debian trixie/main amd64 lynx amd64 2.9.2-1 [641 kB]
Get: 70 http://deb.debian.org/debian trixie/main amd64 cppreference-doc-en-html all 20170409-2 [3593 kB]
Get: 71 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 72 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-4 [539 kB]
Get: 73 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 74 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 75 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 76 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 77 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 78 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 79 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 80 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 81 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 82 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.1 [920 kB]
Get: 83 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB]
Get: 84 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB]
Get: 85 http://deb.debian.org/debian trixie/main amd64 libllvm19 amd64 1:19.1.7-1+b1 [26.0 MB]
Get: 86 http://deb.debian.org/debian trixie/main amd64 libclang-cpp19 amd64 1:19.1.7-1+b1 [13.2 MB]
Get: 87 http://deb.debian.org/debian trixie/main amd64 libclang1-19 amd64 1:19.1.7-1+b1 [7614 kB]
Get: 88 http://deb.debian.org/debian trixie/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB]
Get: 89 http://deb.debian.org/debian trixie/main amd64 doxygen amd64 1.9.8+ds-2.1 [5017 kB]
Get: 90 http://deb.debian.org/debian trixie/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB]
Get: 91 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.47-1 [282 kB]
Get: 92 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 93 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+24 [217 kB]
Get: 94 http://deb.debian.org/debian trixie/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get: 95 http://deb.debian.org/debian trixie/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB]
Get: 96 http://deb.debian.org/debian trixie/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB]
Get: 97 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-2.1 [318 kB]
Get: 98 http://deb.debian.org/debian trixie/main amd64 fonts-lmodern all 2.005-1 [4540 kB]
Get: 99 http://deb.debian.org/debian trixie/main amd64 libgs-common all 10.04.0~dfsg-2 [148 kB]
Get: 100 http://deb.debian.org/debian trixie/main amd64 libgs10-common all 10.04.0~dfsg-2 [475 kB]
Get: 101 http://deb.debian.org/debian trixie/main amd64 libavahi-common-data amd64 0.8-16 [112 kB]
Get: 102 http://deb.debian.org/debian trixie/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB]
Get: 103 http://deb.debian.org/debian trixie/main amd64 libdbus-1-3 amd64 1.16.2-2 [178 kB]
Get: 104 http://deb.debian.org/debian trixie/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB]
Get: 105 http://deb.debian.org/debian trixie/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB]
Get: 106 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-2.1 [391 kB]
Get: 107 http://deb.debian.org/debian trixie/main amd64 libidn12 amd64 1.42-3 [81.0 kB]
Get: 108 http://deb.debian.org/debian trixie/main amd64 libijs-0.35 amd64 0.35-15.2 [14.8 kB]
Get: 109 http://deb.debian.org/debian trixie/main amd64 libjbig2dec0 amd64 0.20-1+b3 [65.1 kB]
Get: 110 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get: 111 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get: 112 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.3-2 [204 kB]
Get: 113 http://deb.debian.org/debian trixie/main amd64 libpaper2 amd64 2.2.5-0.3+b1 [16.6 kB]
Get: 114 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB]
Get: 115 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get: 116 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get: 117 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB]
Get: 118 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB]
Get: 119 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB]
Get: 120 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 121 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get: 122 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 123 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 124 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 125 http://deb.debian.org/debian trixie/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB]
Get: 126 http://deb.debian.org/debian trixie/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB]
Get: 127 http://deb.debian.org/debian trixie/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB]
Get: 128 http://deb.debian.org/debian trixie/main amd64 libgs10 amd64 10.04.0~dfsg-2+b1 [2561 kB]
Get: 129 http://deb.debian.org/debian trixie/main amd64 ghostscript amd64 10.04.0~dfsg-2+b1 [50.9 kB]
Get: 130 http://deb.debian.org/debian trixie/main amd64 googletest all 1.16.0-1 [517 kB]
Get: 131 http://deb.debian.org/debian trixie/main amd64 libapache-pom-java all 33-2 [5852 B]
Get: 132 http://deb.debian.org/debian trixie/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB]
Get: 133 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB]
Get: 134 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get: 135 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get: 136 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get: 137 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB]
Get: 138 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-2 [535 kB]
Get: 139 http://deb.debian.org/debian trixie/main amd64 rapidjson-dev all 1.1.0+dfsg2-7.3 [98.0 kB]
Get: 140 http://deb.debian.org/debian trixie/main amd64 libcereal-dev amd64 1.3.2+dfsg-5 [221 kB]
Get: 141 http://deb.debian.org/debian trixie/main amd64 libcommons-parent-java all 56-1 [10.8 kB]
Get: 142 http://deb.debian.org/debian trixie/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB]
Get: 143 http://deb.debian.org/debian trixie/main amd64 libfontbox-java all 1:1.8.16-5 [211 kB]
Get: 144 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.84.0-1 [1514 kB]
Get: 145 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 146 http://deb.debian.org/debian trixie/main amd64 libgtest-dev amd64 1.16.0-1 [259 kB]
Get: 147 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB]
Get: 148 http://deb.debian.org/debian trixie/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5+b1 [157 kB]
Get: 149 http://deb.debian.org/debian trixie/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB]
Get: 150 http://deb.debian.org/debian trixie/main amd64 libpaper-utils amd64 2.2.5-0.3+b1 [16.4 kB]
Get: 151 http://deb.debian.org/debian trixie/main amd64 libpdfbox-java all 1:1.8.16-5 [5527 kB]
Get: 152 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB]
Get: 153 http://deb.debian.org/debian trixie/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB]
Get: 154 http://deb.debian.org/debian trixie/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5+b1 [49.4 kB]
Get: 155 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 156 http://deb.debian.org/debian trixie/main amd64 libseqan3-dev all 3.4.0~rc.3+ds-3 [769 kB]
Get: 157 http://deb.debian.org/debian trixie/main amd64 libsimde-dev all 0.8.2-3 [467 kB]
Get: 158 http://deb.debian.org/debian trixie/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5+b1 [63.0 kB]
Get: 159 http://deb.debian.org/debian trixie/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB]
Get: 160 http://deb.debian.org/debian trixie/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5+b1 [115 kB]
Get: 161 http://deb.debian.org/debian trixie/main amd64 libxmu6 amd64 2:1.1.3-3+b4 [59.0 kB]
Get: 162 http://deb.debian.org/debian trixie/main amd64 libxpm4 amd64 1:3.5.17-1+b3 [56.2 kB]
Get: 163 http://deb.debian.org/debian trixie/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB]
Get: 164 http://deb.debian.org/debian trixie/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB]
Get: 165 http://deb.debian.org/debian trixie/main amd64 libxxhash-dev amd64 0.8.3-2 [81.0 kB]
Get: 166 http://deb.debian.org/debian trixie/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-7 [133 kB]
Get: 167 http://deb.debian.org/debian trixie/main amd64 libyaml-cpp-dev amd64 0.8.0+dfsg-7 [172 kB]
Get: 168 http://deb.debian.org/debian trixie/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [59.0 kB]
Get: 169 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB]
Get: 170 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB]
Get: 171 http://deb.debian.org/debian trixie/main amd64 tex-common all 6.19 [29.4 kB]
Get: 172 http://deb.debian.org/debian trixie/main amd64 preview-latex-style all 13.2-1 [350 kB]
Get: 173 http://deb.debian.org/debian trixie/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get: 174 http://deb.debian.org/debian trixie/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-5+b1 [8504 kB]
Get: 175 http://deb.debian.org/debian trixie/main amd64 xdg-utils all 1.2.1-2 [75.8 kB]
Get: 176 http://deb.debian.org/debian trixie/main amd64 texlive-base all 2024.20250114-1 [22.8 MB]
Get: 177 http://deb.debian.org/debian trixie/main amd64 texlive-font-utils all 2024.20250114-1 [6984 kB]
Get: 178 http://deb.debian.org/debian trixie/main amd64 texlive-fonts-recommended all 2024.20250114-1 [4991 kB]
Get: 179 http://deb.debian.org/debian trixie/main amd64 texlive-latex-base all 2024.20250114-1 [1282 kB]
Get: 180 http://deb.debian.org/debian trixie/main amd64 texlive-latex-recommended all 2024.20250114-1 [8760 kB]
Get: 181 http://deb.debian.org/debian trixie/main amd64 texlive-pictures all 2024.20250114-1 [17.1 MB]
Get: 182 http://deb.debian.org/debian trixie/main amd64 texlive-latex-extra all 2024.20250114-1 [24.7 MB]
Get: 183 http://deb.debian.org/debian trixie/main amd64 texlive-plain-generic all 2024.20250114-1 [28.9 MB]
Fetched 279 MB in 8s (33.5 MB/s)
Preconfiguring packages ...
Selecting previously unselected package poppler-data.
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Preparing to unpack .../poppler-data_0.4.12-1_all.deb ...
Unpacking poppler-data (0.4.12-1) ...
Selecting previously unselected package libpython3.13-minimal:amd64.
Preparing to unpack .../libpython3.13-minimal_3.13.2-1_amd64.deb ...
Unpacking libpython3.13-minimal:amd64 (3.13.2-1) ...
Selecting previously unselected package libexpat1:amd64.
Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ...
Unpacking libexpat1:amd64 (2.6.4-1) ...
Selecting previously unselected package python3.13-minimal.
Preparing to unpack .../python3.13-minimal_3.13.2-1_amd64.deb ...
Unpacking python3.13-minimal (3.13.2-1) ...
Setting up libpython3.13-minimal:amd64 (3.13.2-1) ...
Setting up libexpat1:amd64 (2.6.4-1) ...
Setting up python3.13-minimal (3.13.2-1) ...
Selecting previously unselected package python3-minimal.
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Preparing to unpack .../0-python3-minimal_3.13.2-2_amd64.deb ...
Unpacking python3-minimal (3.13.2-2) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_13.0.0_all.deb ...
Unpacking media-types (13.0.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../2-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
Selecting previously unselected package tzdata.
Preparing to unpack .../3-tzdata_2025a-2_all.deb ...
Unpacking tzdata (2025a-2) ...
Selecting previously unselected package libffi8:amd64.
Preparing to unpack .../4-libffi8_3.4.7-1_amd64.deb ...
Unpacking libffi8:amd64 (3.4.7-1) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../5-readline-common_8.2-6_all.deb ...
Unpacking readline-common (8.2-6) ...
Selecting previously unselected package libreadline8t64:amd64.
Preparing to unpack .../6-libreadline8t64_8.2-6_amd64.deb ...
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-6) ...
Selecting previously unselected package libpython3.13-stdlib:amd64.
Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-1_amd64.deb ...
Unpacking libpython3.13-stdlib:amd64 (3.13.2-1) ...
Selecting previously unselected package python3.13.
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Unpacking python3.13 (3.13.2-1) ...
Selecting previously unselected package libpython3-stdlib:amd64.
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Setting up python3-minimal (3.13.2-2) ...
Selecting previously unselected package python3.
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Preparing to unpack .../000-python3_3.13.2-2_amd64.deb ...
Unpacking python3 (3.13.2-2) ...
Selecting previously unselected package libproc2-0:amd64.
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Unpacking libproc2-0:amd64 (2:4.0.4-7) ...
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Unpacking procps (2:4.0.4-7) ...
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Unpacking sensible-utils (0.0.24) ...
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Unpacking libmagic-mgc (1:5.45-3+b1) ...
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Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ...
Selecting previously unselected package file.
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Unpacking file (1:5.45-3+b1) ...
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Unpacking gettext-base (0.23.1-1) ...
Selecting previously unselected package libuchardet0:amd64.
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Unpacking libuchardet0:amd64 (0.0.8-1+b2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../009-groff-base_1.23.0-7_amd64.deb ...
Unpacking groff-base (1.23.0-7) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../010-bsdextrautils_2.40.4-5_amd64.deb ...
Unpacking bsdextrautils (2.40.4-5) ...
Selecting previously unselected package libpipeline1:amd64.
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Unpacking libpipeline1:amd64 (1.5.8-1) ...
Selecting previously unselected package man-db.
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Unpacking man-db (2.13.0-1) ...
Selecting previously unselected package libtext-charwidth-perl:amd64.
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Unpacking libtext-charwidth-perl:amd64 (0.04-11+b4) ...
Selecting previously unselected package libtext-wrapi18n-perl.
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Moving old data out of the way
Unpacking ucf (3.0050) ...
Selecting previously unselected package architecture-properties:amd64.
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Unpacking architecture-properties:amd64 (0.2.6) ...
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Unpacking m4 (1.4.19-7) ...
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Unpacking autoconf (2.72-3) ...
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Unpacking autotools-dev (20220109.1) ...
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Unpacking automake (1:1.17-3) ...
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Unpacking autopoint (0.23.1-1) ...
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Unpacking cmake-data (3.31.6-1) ...
Selecting previously unselected package libicu72:amd64.
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 -> Finished parsing the build-deps
I: Building the package
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/A99_set_merged_usr starting
Not re-configuring usrmerge for trixie
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/reproducible-path/seqan-raptor-3.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../seqan-raptor_3.0.1+ds-9_source.changes
dpkg-buildpackage: info: source package seqan-raptor
dpkg-buildpackage: info: source version 3.0.1+ds-9
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
dh clean
   debian/rules override_dh_auto_clean-arch
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_clean
dh_auto_clean --sourcedirectory=test/unit --builddirectory build_unit
#dh_auto_clean --sourcedirectory=test/performance --builddirectory build_performance
#dh_auto_clean --sourcedirectory=test/header --builddirectory build_header
dh_auto_clean --sourcedirectory=test/snippet --builddirectory build_snippet
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   debian/rules override_dh_auto_clean-indep
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_clean --indep --builddir doc_build
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   dh_clean
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure-arch
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_configure -- -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1+ds/lib -DRAPTOR_STRIP_BINARY=OFF
	cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/lib -DRAPTOR_STRIP_BINARY=OFF ..
-- The CXX compiler identification is GNU 14.2.0
-- The C compiler identification is GNU 14.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Finding RAPTOR and checking requirements:
--   RAPTOR include dir found:   /build/reproducible-path/seqan-raptor-3.0.1+ds/include
--   Detected as running from a repository checkout…
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include
--     …adding submodule include:  /usr/include/seqan3/vendor
--   C++ Standard-20 support:    builtin
--   OpenMP Support:             via -fopenmp
--   SIMD-OpenMP Support:        via -fopenmp-simd
--   Suppressing GCC 4 warnings: via -Wno-psabi
--   Optimize build:             via -mpopcnt
--   Link Time Optimization:     enabled
--   Binary-stripping:           disabled
--   Thread support:             builtin
--   Optional dependency:        ZLIB-1.3.1 found
--   Optional dependency:        BZip2-1.0.8 found
--   Optional dependency:        libexecinfo found
-- Found Raptor: /build/reproducible-path/seqan-raptor-3.0.1+ds/include
-- Finding program ccache
-- Finding program ccache - Failed
-- You can run `make` to build the application.
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Checking for module 'libxxhash'
--   Found libxxhash, version 0.8.3
-- Configuring done (6.7s)
-- Generating done (0.1s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu
dh_auto_configure --sourcedirectory=test/unit --builddirectory build_unit -- -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1+ds/lib -DRAPTOR_STRIP_BINARY=OFF
	cd build_unit && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/lib -DRAPTOR_STRIP_BINARY=OFF ../test/unit
-- The CXX compiler identification is GNU 14.2.0
-- The C compiler identification is GNU 14.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Finding RAPTOR and checking requirements:
--   RAPTOR include dir found:   /build/reproducible-path/seqan-raptor-3.0.1+ds/include
--   Detected as running from a repository checkout…
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include
--     …adding submodule include:  /usr/include/seqan3/vendor
--   C++ Standard-20 support:    builtin
--   OpenMP Support:             via -fopenmp
--   SIMD-OpenMP Support:        via -fopenmp-simd
--   Suppressing GCC 4 warnings: via -Wno-psabi
--   Optimize build:             via -mpopcnt
--   Link Time Optimization:     enabled
--   Binary-stripping:           disabled
--   Thread support:             builtin
--   Optional dependency:        ZLIB-1.3.1 found
--   Optional dependency:        BZip2-1.0.8 found
--   Optional dependency:        libexecinfo found
-- Found Raptor: /build/reproducible-path/seqan-raptor-3.0.1+ds/include
-- Finding program ccache
-- Finding program ccache - Failed
-- You can run `make` to build the application.
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Checking for module 'libxxhash'
--   Found libxxhash, version 0.8.3
--   Test dependency:            Google Test 1.15.0 found.
-- Configuring done (11.1s)
-- Generating done (0.1s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit
#dh_auto_configure --sourcedirectory=test/performance --builddirectory build_performance -- -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1+ds/lib -DRAPTOR_STRIP_BINARY=OFF
#dh_auto_configure --sourcedirectory=test/header --builddirectory build_header -- -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1+ds/lib -DRAPTOR_STRIP_BINARY=OFF
dh_auto_configure --sourcedirectory=test/snippet --builddirectory build_snippet -- -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1+ds/lib -DRAPTOR_STRIP_BINARY=OFF
	cd build_snippet && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/lib -DRAPTOR_STRIP_BINARY=OFF ../test/snippet
-- The CXX compiler identification is GNU 14.2.0
-- The C compiler identification is GNU 14.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Finding RAPTOR and checking requirements:
--   RAPTOR include dir found:   /build/reproducible-path/seqan-raptor-3.0.1+ds/include
--   Detected as running from a repository checkout…
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include
--     …adding submodule include:  /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include
--     …adding submodule include:  /usr/include/seqan3/vendor
--   C++ Standard-20 support:    builtin
--   OpenMP Support:             via -fopenmp
--   SIMD-OpenMP Support:        via -fopenmp-simd
--   Suppressing GCC 4 warnings: via -Wno-psabi
--   Optimize build:             via -mpopcnt
--   Link Time Optimization:     enabled
--   Binary-stripping:           disabled
--   Thread support:             builtin
--   Optional dependency:        ZLIB-1.3.1 found
--   Optional dependency:        BZip2-1.0.8 found
--   Optional dependency:        libexecinfo found
-- Found Raptor: /build/reproducible-path/seqan-raptor-3.0.1+ds/include
-- Finding program ccache
-- Finding program ccache - Failed
-- You can run `make` to build the application.
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Checking for module 'libxxhash'
--   Found libxxhash, version 0.8.3
--   Test dependency:            Google Test 1.15.0 found.
-- Configuring done (11.8s)
-- Generating done (0.1s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   debian/rules override_dh_auto_configure-indep
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_configure --sourcedirectory=test/documentation --builddirectory doc_build -- -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1+ds/lib -DRAPTOR_STRIP_BINARY=OFF -Dbuild_search=ON
	cd doc_build && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DRAPTOR_NATIVE_BUILD=OFF -DRAPTOR_SUBMODULES_DIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/lib -DRAPTOR_STRIP_BINARY=OFF -Dbuild_search=ON ../test/documentation
CMake Deprecation Warning at CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.


-- Searching for doxygen.
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot
-- Could not find dot tool. Disabling dot support.
-- Configuring doc.
-- Add doc test.
-- Configuring done (0.3s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    FETCHCONTENT_FULLY_DISCONNECTED
    RAPTOR_NATIVE_BUILD
    RAPTOR_STRIP_BINARY
    RAPTOR_SUBMODULES_DIR
    build_search


-- Build files have been written to: /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build
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dh_auto_build --arch
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade/CMakeFiles/raptor_upgrade.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search/CMakeFiles/raptor_search.dir/DependInfo.cmake "--color="
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make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/depend
[  7%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp
[  9%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/parse_bin_path.cpp
[ 11%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o
[ 11%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o
[ 13%] Building CXX object src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/search_parsing.cpp
[ 15%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -MF CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o.d -o CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade/raptor_upgrade.cpp
[ 17%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/prepare && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -MF CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o.d -o CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare/compute_minimiser.cpp
[ 19%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp
[ 21%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o
[ 23%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o
[ 25%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/raptor_search.cpp
[ 27%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o
[ 29%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/compute_bin_size.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/multiple_error_model.cpp
[ 31%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_ibf.cpp
[ 33%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/upgrade_parsing.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/bin_size_in_bits.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_error_model.cpp
[ 35%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_partitioned_ibf.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 37%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp
[ 39%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -MF CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d -o CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp
[ 41%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp
[ 43%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp
[ 45%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_threshold.cpp
[ 47%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/compute_kmers.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /usr/include/simde/x86/mmx.h:30,
                 from /usr/include/simde/x86/sse.h:33,
                 from /usr/include/simde/x86/avx.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/layout/hibf_statistics.hpp:15,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp:9:
/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic]
  610 | #  define SIMDE_POLY128_TYPE __int128
      |                              ^~~~~~~~
/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’
  616 | typedef SIMDE_POLY128_TYPE simde_poly128;
      |         ^~~~~~~~~~~~~~~~~~
[ 49%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp
[ 50%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp
[ 52%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
[ 54%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/insert_into_ibf.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 56%] Linking CXX static library ../../lib/libraptor_threshold.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o
/usr/bin/ranlib ../../lib/libraptor_threshold.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
[ 56%] Built target raptor_threshold
[ 58%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 60%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/algorithm:60,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
[ 62%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp
[ 64%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp
[ 66%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_parent_kmers.cpp
[ 68%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp
[ 70%] Linking CXX static library ../../lib/libraptor_prepare.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/prepare && /usr/bin/cmake -P CMakeFiles/raptor_prepare.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/prepare && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_prepare.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
/usr/bin/ar qc ../../lib/libraptor_prepare.a CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o
/usr/bin/ranlib ../../lib/libraptor_prepare.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 70%] Built target raptor_prepare
make  -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/CMakeFiles/raptor_build.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make  -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 72%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -MF CMakeFiles/raptor_build.dir/build_ibf.cpp.o.d -o CMakeFiles/raptor_build.dir/build_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/build_ibf.cpp
[ 74%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp
[ 76%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/raptor_build.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 78%] Linking CXX static library ../../../lib/libchopper_layout_lib.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/ar qc ../../../lib/libchopper_layout_lib.a CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o
/usr/bin/ranlib ../../../lib/libchopper_layout_lib.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 78%] Built target chopper_layout_lib
make  -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/depend
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/layout/CMakeFiles/raptor_layout.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build
make  -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 80%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o -MF CMakeFiles/chopper.dir/chopper.cpp.o.d -o CMakeFiles/chopper.dir/chopper.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp
[ 82%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/layout && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -MF CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o.d -o CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout/raptor_layout.cpp
[ 84%] Linking CXX static library ../../lib/libraptor_search.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1
[ 86%] Linking CXX static library ../../../lib/libraptor_build_hibf.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/cmake -P CMakeFiles/raptor_build_hibf.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build_hibf.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_search.a CMakeFiles/raptor_search.dir/raptor_search.cpp.o CMakeFiles/raptor_search.dir/search_hibf.cpp.o CMakeFiles/raptor_search.dir/search_ibf.cpp.o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o
/usr/bin/ranlib ../../lib/libraptor_search.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 86%] Built target raptor_search
/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o
/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 86%] Built target raptor_build_hibf
In file included from /usr/include/simde/x86/mmx.h:30,
                 from /usr/include/simde/x86/sse.h:33,
                 from /usr/include/simde/x86/avx.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/toolbox.hpp:11,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/data_store.hpp:8,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp:6:
/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic]
  610 | #  define SIMDE_POLY128_TYPE __int128
      |                              ^~~~~~~~
/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’
  616 | typedef SIMDE_POLY128_TYPE simde_poly128;
      |         ^~~~~~~~~~~~~~~~~~
[ 88%] Linking CXX static library ../../lib/libraptor_upgrade.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o
/usr/bin/ranlib ../../lib/libraptor_upgrade.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 88%] Built target raptor_upgrade
[ 90%] Linking CXX static library ../../lib/libraptor_build.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o
/usr/bin/ranlib ../../lib/libraptor_build.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 90%] Built target raptor_build
[ 92%] Linking CXX static library ../../lib/libraptor_argument_parsing.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/cmake -P CMakeFiles/raptor_argument_parsing.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_argument_parsing.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_argument_parsing.a CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o
/usr/bin/ranlib ../../lib/libraptor_argument_parsing.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 92%] Built target raptor_argument_parsing
[ 94%] Linking CXX static library ../../lib/libraptor_layout.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/layout && /usr/bin/cmake -P CMakeFiles/raptor_layout.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/layout && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_layout.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_layout.a CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o
/usr/bin/ranlib ../../lib/libraptor_layout.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 94%] Built target raptor_layout
make  -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/CMakeFiles/raptor.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make  -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 96%] Building CXX object src/CMakeFiles/raptor.dir/raptor.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/CMakeFiles/raptor.dir/raptor.cpp.o -MF CMakeFiles/raptor.dir/raptor.cpp.o.d -o CMakeFiles/raptor.dir/raptor.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/raptor.cpp
[ 98%] Linking CXX executable ../bin/raptor
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/raptor.dir/link.d CMakeFiles/raptor.dir/raptor.cpp.o -o ../bin/raptor  ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libxxhash.a /usr/lib/x86_64-linux-gnu/libxxhash.so
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[ 98%] Built target raptor
[100%] Linking CXX executable ../../../bin/chopper
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/chopper.dir/link.d CMakeFiles/chopper.dir/chopper.cpp.o -o ../../../bin/chopper  ../../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
[100%] Built target chopper
make[3]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/CMakeFiles 0
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
obj-*/bin/raptor --export-help man > debian/raptor.1
obj-*/bin/raptor build --export-help man > debian/raptor-build.1
obj-*/bin/raptor search --export-help man > debian/raptor-search.1
obj-*/bin/raptor layout --export-help man > debian/raptor-layout.1
obj-*/bin/raptor prepare --export-help man > debian/raptor-prepare.1
obj-*/bin/raptor upgrade --export-help man > debian/raptor-upgrade.1
obj-*/bin/raptor build --export-help cwl > debian/raptor-build.cwl
obj-*/bin/raptor search --export-help cwl > debian/raptor-search.cwl
obj-*/bin/raptor layout --export-help cwl > debian/raptor-layout.cwl
obj-*/bin/raptor prepare --export-help cwl > debian/raptor-prepare.cwl
obj-*/bin/raptor upgrade --export-help cwl > debian/raptor-upgrade.cwl
dh_auto_build --arch --builddirectory build_unit
	cd build_unit && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
/usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit -B/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/CMakeFiles /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/depend
make  -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/depend
make  -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/depend
make  -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/depend
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/bin_size_in_bits.cpp
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -MF CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o.d -o CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade/raptor_upgrade.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/compute_kmers.cpp
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_ibf.cpp
[ 12%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp
[ 13%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_partitioned_ibf.cpp
[ 16%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o
[ 17%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/multiple_error_model.cpp
[ 20%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o
[ 20%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build
[ 16%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o
[ 16%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o
[ 22%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o
[ 24%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp
[ 24%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o
[ 22%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/insert_into_ibf.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp
[ 25%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -MF CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d -o CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp
[ 26%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_error_model.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/algorithm:60,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
[ 27%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o
[ 29%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_parent_kmers.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp
[ 30%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /usr/include/simde/x86/mmx.h:30,
                 from /usr/include/simde/x86/sse.h:33,
                 from /usr/include/simde/x86/avx.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/layout/hibf_statistics.hpp:15,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp:9:
/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic]
  610 | #  define SIMDE_POLY128_TYPE __int128
      |                              ^~~~~~~~
/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’
  616 | typedef SIMDE_POLY128_TYPE simde_poly128;
      |         ^~~~~~~~~~~~~~~~~~
[ 31%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/compute_bin_size.cpp
[ 32%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 34%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp
[ 35%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 36%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_threshold.cpp
[ 37%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 39%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/parse_bin_path.cpp
[ 40%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp
[ 41%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/search_parsing.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/upgrade_parsing.cpp
[ 44%] Linking CXX static library ../../lib/libraptor_threshold.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o
/usr/bin/ranlib ../../lib/libraptor_threshold.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 44%] Built target raptor_threshold
[ 45%] Linking CXX static library ../../lib/libraptor_prepare.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/prepare && /usr/bin/cmake -P CMakeFiles/raptor_prepare.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/prepare && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_prepare.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_prepare.a CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o
/usr/bin/ranlib ../../lib/libraptor_prepare.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 45%] Built target raptor_prepare
make  -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/CMakeFiles/raptor_build.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 46%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -MF CMakeFiles/raptor_build.dir/build_ibf.cpp.o.d -o CMakeFiles/raptor_build.dir/build_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/build_ibf.cpp
[ 48%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp
[ 49%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/raptor_build.cpp
[ 50%] Linking CXX static library ../../../lib/libraptor_build_hibf.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/cmake -P CMakeFiles/raptor_build_hibf.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build_hibf.dir/link.txt --verbose=1
[ 51%] Linking CXX static library ../../../lib/libchopper_layout_lib.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/libchopper_layout_lib.a CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o
/usr/bin/ranlib ../../../lib/libchopper_layout_lib.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 51%] Built target chopper_layout_lib
make  -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout/CMakeFiles/raptor_layout.dir/DependInfo.cmake "--color="
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 53%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -MF CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o.d -o CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout/raptor_layout.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 54%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o -MF CMakeFiles/chopper.dir/chopper.cpp.o.d -o CMakeFiles/chopper.dir/chopper.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp
/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o
/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 54%] Built target raptor_build_hibf
[ 55%] Linking CXX static library ../../lib/libraptor_search.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_search.a CMakeFiles/raptor_search.dir/raptor_search.cpp.o CMakeFiles/raptor_search.dir/search_hibf.cpp.o CMakeFiles/raptor_search.dir/search_ibf.cpp.o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o
/usr/bin/ranlib ../../lib/libraptor_search.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 55%] Built target raptor_search
In file included from /usr/include/simde/x86/mmx.h:30,
                 from /usr/include/simde/x86/sse.h:33,
                 from /usr/include/simde/x86/avx.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/toolbox.hpp:11,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/data_store.hpp:8,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp:6:
/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic]
  610 | #  define SIMDE_POLY128_TYPE __int128
      |                              ^~~~~~~~
/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’
  616 | typedef SIMDE_POLY128_TYPE simde_poly128;
      |         ^~~~~~~~~~~~~~~~~~
[ 56%] Linking CXX static library ../../lib/libraptor_build.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o
/usr/bin/ranlib ../../lib/libraptor_build.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 56%] Built target raptor_build
[ 58%] Linking CXX static library ../../lib/libraptor_upgrade.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o
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make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 58%] Built target raptor_upgrade
[ 59%] Linking CXX static library ../../lib/libraptor_argument_parsing.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/cmake -P CMakeFiles/raptor_argument_parsing.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_argument_parsing.dir/link.txt --verbose=1
[ 60%] Linking CXX static library ../../lib/libraptor_layout.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout && /usr/bin/cmake -P CMakeFiles/raptor_layout.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_layout.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_layout.a CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o
/usr/bin/ranlib ../../lib/libraptor_layout.a
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[ 60%] Built target raptor_layout
/usr/bin/ar qc ../../lib/libraptor_argument_parsing.a "CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o" CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o
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[ 60%] Built target raptor_argument_parsing
make  -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/CMakeFiles/raptor.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 62%] Building CXX object src/CMakeFiles/raptor.dir/raptor.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/CMakeFiles/raptor.dir/raptor.cpp.o -MF CMakeFiles/raptor.dir/raptor.cpp.o.d -o CMakeFiles/raptor.dir/raptor.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/raptor.cpp
[ 63%] Linking CXX executable ../bin/raptor
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/raptor.dir/link.d CMakeFiles/raptor.dir/raptor.cpp.o -o ../bin/raptor  ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libxxhash.a /usr/lib/x86_64-linux-gnu/libxxhash.so
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[ 63%] Built target raptor
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[ 65%] Building CXX object api/CMakeFiles/issue_142.dir/issue_142.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT api/CMakeFiles/memory_usage.dir/memory_usage.cpp.o -MF CMakeFiles/memory_usage.dir/memory_usage.cpp.o.d -o CMakeFiles/memory_usage.dir/memory_usage.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/api/memory_usage.cpp
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT api/CMakeFiles/validate_shape.dir/validate_shape.cpp.o -MF CMakeFiles/validate_shape.dir/validate_shape.cpp.o.d -o CMakeFiles/validate_shape.dir/validate_shape.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/api/validate_shape.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT api/CMakeFiles/issue_142.dir/issue_142.cpp.o -MF CMakeFiles/issue_142.dir/issue_142.cpp.o.d -o CMakeFiles/issue_142.dir/issue_142.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/api/issue_142.cpp
[ 68%] Building CXX object cli/build/CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/build/CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o -MF CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o.d -o CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build/build_hibf_chopper_test.cpp
make  -f cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 69%] Building CXX object cli/argument_parsing/CMakeFiles/options_test.dir/options_test.cpp.o
make  -f cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/depend
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/argument_parsing/CMakeFiles/options_test.dir/options_test.cpp.o -MF CMakeFiles/options_test.dir/options_test.cpp.o.d -o CMakeFiles/options_test.dir/options_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/argument_parsing/options_test.cpp
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/DependInfo.cmake "--color="
make  -f cli/search/CMakeFiles/search_ibf_test.dir/build.make cli/search/CMakeFiles/search_ibf_test.dir/depend
[ 70%] Building CXX object cli/build/CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o
make  -f cli/upgrade/CMakeFiles/upgrade_test.dir/build.make cli/upgrade/CMakeFiles/upgrade_test.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/CMakeFiles/search_ibf_test.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/build/CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -MF CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o.d -o CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build/build_hibf_test.cpp
[ 72%] Building CXX object cli/build/CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade/CMakeFiles/upgrade_test.dir/DependInfo.cmake "--color="
[ 73%] Building CXX object cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/build/CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o -MF CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o.d -o CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build/build_ibf_compressed_test.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o -MF CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o.d -o CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build/build_ibf_partitioned_test.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
make  -f cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build
[ 74%] Building CXX object cli/build/CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/build/CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o -MF CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o.d -o CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build/build_ibf_test.cpp
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make  -f cli/search/CMakeFiles/search_hibf_test.dir/build.make cli/search/CMakeFiles/search_hibf_test.dir/build
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make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
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[ 75%] Building CXX object cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o
[ 77%] Building CXX object cli/search/CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -MF CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o.d -o CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_hibf_preprocessing_test.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o -MF CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o.d -o CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_hibf_test.cpp
[ 78%] Building CXX object cli/search/CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -MF CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o.d -o CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_ibf_test.cpp
[ 79%] Building CXX object cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o
[ 81%] Building CXX object cli/upgrade/CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/upgrade/CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -MF CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o.d -o CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/upgrade/upgrade_test.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -MF CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o.d -o CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_ibf_preprocessing_test.cpp
[ 82%] Linking CXX executable memory_usage
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/memory_usage.dir/link.txt --verbose=1
[ 83%] Linking CXX executable issue_142
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/issue_142.dir/link.txt --verbose=1
[ 84%] Linking CXX executable ../../../bin/chopper
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/issue_142.dir/link.d CMakeFiles/issue_142.dir/issue_142.cpp.o -o issue_142  ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 84%] Built target issue_142
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/memory_usage.dir/link.d CMakeFiles/memory_usage.dir/memory_usage.cpp.o -o memory_usage  ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 84%] Built target memory_usage
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/chopper.dir/link.d CMakeFiles/chopper.dir/chopper.cpp.o -o ../../../bin/chopper  ../../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 84%] Built target chopper
[ 86%] Linking CXX executable search_hibf_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_hibf_test.dir/link.txt --verbose=1
[ 87%] Linking CXX executable build_hibf_chopper_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_hibf_chopper_test.dir/link.txt --verbose=1
[ 88%] Linking CXX executable search_ibf_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_ibf_test.dir/link.txt --verbose=1
[ 89%] Linking CXX executable options_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing && /usr/bin/cmake -E cmake_link_script CMakeFiles/options_test.dir/link.txt --verbose=1
[ 91%] Linking CXX executable build_hibf_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_hibf_test.dir/link.txt --verbose=1
[ 92%] Linking CXX executable build_ibf_partitioned_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_ibf_partitioned_test.dir/link.txt --verbose=1
[ 93%] Linking CXX executable search_hibf_preprocessing_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_hibf_preprocessing_test.dir/link.txt --verbose=1
[ 94%] Linking CXX executable build_ibf_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_ibf_test.dir/link.txt --verbose=1
[ 96%] Linking CXX executable upgrade_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/upgrade_test.dir/link.txt --verbose=1
[ 97%] Linking CXX executable build_ibf_compressed_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_ibf_compressed_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_hibf_chopper_test.dir/link.d CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o -o build_hibf_chopper_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 97%] Built target build_hibf_chopper_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/options_test.dir/link.d CMakeFiles/options_test.dir/options_test.cpp.o -o options_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 97%] Built target options_test
[ 98%] Linking CXX executable search_ibf_preprocessing_test
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_ibf_preprocessing_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_hibf_test.dir/link.d CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o -o search_hibf_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target search_hibf_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_ibf_test.dir/link.d CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -o search_ibf_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target search_ibf_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/upgrade_test.dir/link.d CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -o upgrade_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target upgrade_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_partitioned_test.dir/link.d CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o -o build_ibf_partitioned_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target build_ibf_partitioned_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_test.dir/link.d CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o -o build_ibf_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target build_ibf_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_hibf_test.dir/link.d CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -o build_hibf_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target build_hibf_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_hibf_preprocessing_test.dir/link.d CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -o search_hibf_preprocessing_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target search_hibf_preprocessing_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_compressed_test.dir/link.d CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o -o build_ibf_compressed_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target build_ibf_compressed_test
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_ibf_preprocessing_test.dir/link.d CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -o search_ibf_preprocessing_test  ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
[ 98%] Built target search_ibf_preprocessing_test
[100%] Linking CXX executable validate_shape
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/validate_shape.dir/link.txt --verbose=1
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/prepare && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -MF CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o.d -o CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare/compute_minimiser.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -MF CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o.d -o CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade/raptor_upgrade.cpp
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp
[ 15%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_error_model.cpp
[ 15%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o
[ 16%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o
[ 18%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o
[ 23%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o
[ 23%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o
[ 23%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/compute_kmers.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/compute_bin_size.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 25%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o
make  -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp
[ 27%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build
[ 28%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp
[ 30%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make[4]: Nothing to be done for '_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 32%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/raptor_search.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/parse_bin_path.cpp
[ 32%] Built target xxhash_project
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 33%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -MF CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d -o CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp
[ 35%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_threshold.cpp
[ 37%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp
[ 38%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_ibf.cpp
[ 40%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /usr/include/simde/x86/mmx.h:30,
                 from /usr/include/simde/x86/sse.h:33,
                 from /usr/include/simde/x86/avx.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/layout/hibf_statistics.hpp:15,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp:9:
/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic]
  610 | #  define SIMDE_POLY128_TYPE __int128
      |                              ^~~~~~~~
/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’
  616 | typedef SIMDE_POLY128_TYPE simde_poly128;
      |         ^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
[ 42%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/insert_into_ibf.cpp
[ 44%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_partitioned_ibf.cpp
[ 45%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp
[ 47%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 49%] Linking CXX static library ../../lib/libraptor_threshold.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/algorithm:60,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o
/usr/bin/ranlib ../../lib/libraptor_threshold.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 49%] Built target raptor_threshold
[ 50%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp
[ 54%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_parent_kmers.cpp
[ 55%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/search_parsing.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
[ 57%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/upgrade_parsing.cpp
[ 61%] Linking CXX static library ../../lib/libraptor_prepare.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/prepare && /usr/bin/cmake -P CMakeFiles/raptor_prepare.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/prepare && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_prepare.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_prepare.a CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o
/usr/bin/ranlib ../../lib/libraptor_prepare.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 61%] Built target raptor_prepare
make  -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/CMakeFiles/raptor_build.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 62%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp
[ 64%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -MF CMakeFiles/raptor_build.dir/build_ibf.cpp.o.d -o CMakeFiles/raptor_build.dir/build_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/build_ibf.cpp
[ 66%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/raptor_build.cpp
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13:
/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
   20 |       : public T, public std::iterator<std::input_iterator_tag, T> {
      |                               ^~~~~~~~
In file included from /usr/include/c++/14/bits/stl_algobase.h:65,
                 from /usr/include/c++/14/vector:62,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26:
/usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 |     struct _GLIBCXX17_DEPRECATED iterator
      |                                  ^~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15:
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   27 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> ibf_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: the default value for the current CPU tuning is 64 bytes
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’
/build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size]
   28 |     alignas(std::hardware_destructive_interference_size) std::atomic<size_t> user_bin_number{};
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX static library ../../../lib/libchopper_layout_lib.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/libchopper_layout_lib.a CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o
/usr/bin/ranlib ../../../lib/libchopper_layout_lib.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 67%] Built target chopper_layout_lib
make  -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/layout/CMakeFiles/raptor_layout.dir/DependInfo.cmake "--color="
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 69%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o -MF CMakeFiles/chopper.dir/chopper.cpp.o.d -o CMakeFiles/chopper.dir/chopper.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp
[ 71%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/layout && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -MF CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o.d -o CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout/raptor_layout.cpp
[ 72%] Linking CXX static library ../../../lib/libraptor_build_hibf.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/cmake -P CMakeFiles/raptor_build_hibf.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build_hibf.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o
/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 72%] Built target raptor_build_hibf
In file included from /usr/include/simde/x86/mmx.h:30,
                 from /usr/include/simde/x86/sse.h:33,
                 from /usr/include/simde/x86/avx.h:28,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/toolbox.hpp:11,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/data_store.hpp:8,
                 from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp:6:
/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic]
  610 | #  define SIMDE_POLY128_TYPE __int128
      |                              ^~~~~~~~
/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’
  616 | typedef SIMDE_POLY128_TYPE simde_poly128;
      |         ^~~~~~~~~~~~~~~~~~
[ 74%] Linking CXX static library ../../lib/libraptor_search.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_search.a CMakeFiles/raptor_search.dir/raptor_search.cpp.o CMakeFiles/raptor_search.dir/search_hibf.cpp.o CMakeFiles/raptor_search.dir/search_ibf.cpp.o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o
/usr/bin/ranlib ../../lib/libraptor_search.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 74%] Built target raptor_search
[ 76%] Linking CXX static library ../../lib/libraptor_build.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o
/usr/bin/ranlib ../../lib/libraptor_build.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 76%] Built target raptor_build
[ 77%] Linking CXX static library ../../lib/libraptor_upgrade.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o
/usr/bin/ranlib ../../lib/libraptor_upgrade.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 77%] Built target raptor_upgrade
[ 79%] Linking CXX static library ../../lib/libraptor_argument_parsing.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/cmake -P CMakeFiles/raptor_argument_parsing.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_argument_parsing.dir/link.txt --verbose=1
[ 81%] Linking CXX static library ../../lib/libraptor_layout.a
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/layout && /usr/bin/cmake -P CMakeFiles/raptor_layout.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/layout && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_layout.dir/link.txt --verbose=1
/usr/bin/ar qc ../../lib/libraptor_layout.a CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o
/usr/bin/ranlib ../../lib/libraptor_layout.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 81%] Built target raptor_layout
/usr/bin/ar qc ../../lib/libraptor_argument_parsing.a "CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o" CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o
/usr/bin/ranlib ../../lib/libraptor_argument_parsing.a
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 81%] Built target raptor_argument_parsing
make  -f CMakeFiles/snippet_main.dir/build.make CMakeFiles/snippet_main.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/CMakeFiles/snippet_main.dir/DependInfo.cmake "--color="
make  -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/CMakeFiles/raptor.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f CMakeFiles/snippet_main.dir/build.make CMakeFiles/snippet_main.dir/build
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make  -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
[ 83%] Building CXX object CMakeFiles/snippet_main.dir/snippet_main.cpp.o
/usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT CMakeFiles/snippet_main.dir/snippet_main.cpp.o -MF CMakeFiles/snippet_main.dir/snippet_main.cpp.o.d -o CMakeFiles/snippet_main.dir/snippet_main.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.cpp
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cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/CMakeFiles/raptor.dir/raptor.cpp.o -MF CMakeFiles/raptor.dir/raptor.cpp.o.d -o CMakeFiles/raptor.dir/raptor.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/raptor.cpp
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[ 88%] Building CXX object CMakeFiles/bin_indices_of_ibf_snippet.dir/hibf/bin_indices_of_ibf.cpp.o
/usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT CMakeFiles/bin_indices_of_ibf_snippet.dir/hibf/bin_indices_of_ibf.cpp.o -MF CMakeFiles/bin_indices_of_ibf_snippet.dir/hibf/bin_indices_of_ibf.cpp.o.d -o CMakeFiles/bin_indices_of_ibf_snippet.dir/hibf/bin_indices_of_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.cpp
[ 89%] Building CXX object CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o
/usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o -MF CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o.d -o CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.cpp
[ 91%] Building CXX object CMakeFiles/filename_of_user_bin_snippet.dir/hibf/filename_of_user_bin.cpp.o
/usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /usr/include/seqan3/vendor -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT CMakeFiles/filename_of_user_bin_snippet.dir/hibf/filename_of_user_bin.cpp.o -MF CMakeFiles/filename_of_user_bin_snippet.dir/hibf/filename_of_user_bin.cpp.o.d -o CMakeFiles/filename_of_user_bin_snippet.dir/hibf/filename_of_user_bin.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.cpp
[ 93%] Linking CXX executable snippet_main_snippet
/usr/bin/cmake -E cmake_link_script CMakeFiles/snippet_main_snippet.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/snippet_main_snippet.dir/link.d CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o -o snippet_main_snippet  libsnippet_main.a -lgtest_main -lgtest lib/libraptor_argument_parsing.a lib/libraptor_build.a lib/libraptor_build_hibf.a lib/libraptor_prepare.a lib/libraptor_search.a lib/libraptor_threshold.a lib/libraptor_upgrade.a lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/filename_of_user_bin_snippet.dir/link.d CMakeFiles/filename_of_user_bin_snippet.dir/hibf/filename_of_user_bin.cpp.o -o hibf/filename_of_user_bin_snippet  libsnippet_main.a -lgtest_main -lgtest lib/libraptor_argument_parsing.a lib/libraptor_build.a lib/libraptor_build_hibf.a lib/libraptor_prepare.a lib/libraptor_search.a lib/libraptor_threshold.a lib/libraptor_upgrade.a lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a
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[ 98%] Linking CXX executable ../bin/raptor
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Building macro definition list...
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Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating image form_0.png for formula
Generating image form_1.png for formula
Generating image form_2.png for formula
Generating image form_3.png for formula
Generating image form_4.png for formula
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Generating image form_11.png for formula
Generating image form_12.png for formula
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Generating image form_0_dark.png for formula
Generating image form_1_dark.png for formula
Generating image form_2_dark.png for formula
Generating image form_3_dark.png for formula
Generating image form_4_dark.png for formula
Generating image form_5_dark.png for formula
Generating image form_6_dark.png for formula
Generating image form_7_dark.png for formula
Generating image form_8_dark.png for formula
Generating image form_9_dark.png for formula
Generating image form_10_dark.png for formula
Generating image form_11_dark.png for formula
Generating image form_12_dark.png for formula
Generating image form_13_dark.png for formula
Generating image form_14_dark.png for formula
Generating image form_15_dark.png for formula
Generating image form_16_dark.png for formula
Generating image form_17_dark.png for formula
Generating image form_18_dark.png for formula
Generating image form_19_dark.png for formula
Generating image form_20_dark.png for formula
Generating image form_21_dark.png for formula
Generating image form_22_dark.png for formula
Generating image form_23_dark.png for formula
Generating example documentation...
Generating file sources...
Parsing code for file CHANGELOG.md...
Parsing code for file hibf.svg...
Parsing code for file ibf.svg...
Parsing code for file Raptor_no_title.svg...
Parsing code for file index.md...
Parsing code for file index.md...
Parsing code for file index.md...
Parsing code for file index.md...
Parsing code for file index.md...
Generating code for file adjust_seed.hpp...
Generating code for file build_arguments.hpp...
Generating code for file build_parsing.hpp...
Generating code for file compute_bin_size.hpp...
Generating code for file init_shared_meta.hpp...
Generating code for file memory_usage.hpp...
Generating code for file parse_bin_path.hpp...
Generating code for file prepare_arguments.hpp...
Generating code for file prepare_parsing.hpp...
Generating code for file search_arguments.hpp...
Generating code for file search_parsing.hpp...
Generating code for file shared.hpp...
Generating code for file timer.hpp...
Generating code for file upgrade_arguments.hpp...
Generating code for file upgrade_parsing.hpp...
Generating code for file validators.hpp...
Generating code for file build_ibf.hpp...
Generating code for file emplace_iterator.hpp...
Generating code for file bin_size_in_bits.hpp...
Generating code for file build_data.hpp...
Generating code for file chopper_build.hpp...
Generating code for file chopper_pack_record.hpp...
Generating code for file compute_kmers.hpp...
Generating code for file construct_ibf.hpp...
Generating code for file create_ibfs_from_chopper_pack.hpp...
Generating code for file hierarchical_build.hpp...
Generating code for file insert_into_ibf.hpp...
Generating code for file loop_over_children.hpp...
Generating code for file node_data.hpp...
Generating code for file parse_chopper_pack_header.hpp...
Generating code for file parse_chopper_pack_line.hpp...
Generating code for file read_chopper_pack_file.hpp...
Generating code for file update_parent_kmers.hpp...
Generating code for file update_user_bins.hpp...
Generating code for file index_factory.hpp...
Generating code for file max_count_per_partition.hpp...
Generating code for file partition_config.hpp...
Generating code for file raptor_build.hpp...
Generating code for file store_index.hpp...
Generating code for file call_parallel_on_bins.hpp...
Generating code for file dna4_traits.hpp...
Generating code for file file_reader.hpp...
Generating code for file hierarchical_interleaved_bloom_filter.hpp...
Generating code for file index.hpp...
Generating code for file raptor_layout.hpp...
Generating code for file compute_minimiser.hpp...
Generating code for file cutoff.hpp...
Generating code for file raptor.hpp...
Generating code for file do_parallel.hpp...
Generating code for file load_index.hpp...
Generating code for file search.hpp...
Generating code for file search_hibf.hpp...
Generating code for file search_ibf.hpp...
Generating code for file search_partitioned_ibf.hpp...
Generating code for file search_singular_ibf.hpp...
Generating code for file sync_out.hpp...
Generating code for file strong_types.hpp...
Generating code for file forward_strand_minimiser.hpp...
Generating code for file logspace.hpp...
Generating code for file multiple_error_model.hpp...
Generating code for file one_error_model.hpp...
Generating code for file one_indirect_error_model.hpp...
Generating code for file pascal_row.hpp...
Generating code for file precompute_correction.hpp...
Generating code for file precompute_threshold.hpp...
Generating code for file threshold.hpp...
Generating code for file threshold_parameters.hpp...
Generating code for file index_upgrader.hpp...
Generating code for file upgrade.hpp...
Generating code for file version.hpp...
Parsing code for file LICENSE.md...
Parsing code for file build_parsing.cpp...
Parsing code for file compute_bin_size.cpp...
Parsing code for file init_shared_meta.cpp...
Parsing code for file parse_bin_path.cpp...
Parsing code for file prepare_parsing.cpp...
Parsing code for file search_parsing.cpp...
Parsing code for file upgrade_parsing.cpp...
Parsing code for file build_ibf.cpp...
Parsing code for file bin_size_in_bits.cpp...
Parsing code for file chopper_build.cpp...
Parsing code for file compute_kmers.cpp...
Parsing code for file construct_ibf.cpp...
Parsing code for file create_ibfs_from_chopper_pack.cpp...
Parsing code for file hierarchical_build.cpp...
Parsing code for file insert_into_ibf.cpp...
Parsing code for file loop_over_children.cpp...
Parsing code for file parse_chopper_pack_header.cpp...
Parsing code for file parse_chopper_pack_line.cpp...
Parsing code for file read_chopper_pack_file.cpp...
Parsing code for file update_parent_kmers.cpp...
Parsing code for file update_user_bins.cpp...
Parsing code for file max_count_per_partition.cpp...
Parsing code for file raptor_build.cpp...
Parsing code for file raptor_layout.cpp...
Parsing code for file compute_minimiser.cpp...
Parsing code for file raptor.cpp...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file CMakeLists.txt...
Parsing code for file raptor_search.cpp...
Parsing code for file search_hibf.cpp...
Parsing code for file search_ibf.cpp...
Parsing code for file search_partitioned_ibf.cpp...
Parsing code for file multiple_error_model.cpp...
Parsing code for file one_error_model.cpp...
Parsing code for file one_indirect_error_model.cpp...
Parsing code for file pascal_row.cpp...
Parsing code for file precompute_correction.cpp...
Parsing code for file precompute_threshold.cpp...
Parsing code for file raptor_upgrade.cpp...
Generating file documentation...
Generating docs for file adjust_seed.hpp...
Generating docs for file build_arguments.hpp...
Generating docs for file build_parsing.hpp...
Generating docs for file compute_bin_size.hpp...
Generating docs for file init_shared_meta.hpp...
Generating docs for file memory_usage.hpp...
Generating docs for file parse_bin_path.hpp...
Generating docs for file prepare_arguments.hpp...
Generating docs for file prepare_parsing.hpp...
Generating docs for file search_arguments.hpp...
Generating docs for file search_parsing.hpp...
Generating docs for file shared.hpp...
Generating docs for file timer.hpp...
Generating docs for file upgrade_arguments.hpp...
Generating docs for file upgrade_parsing.hpp...
Generating docs for file validators.hpp...
Generating docs for file build_ibf.hpp...
Generating docs for file emplace_iterator.hpp...
Generating docs for file bin_size_in_bits.hpp...
Generating docs for file build_data.hpp...
Generating docs for file chopper_build.hpp...
Generating docs for file chopper_pack_record.hpp...
Generating docs for file compute_kmers.hpp...
Generating docs for file construct_ibf.hpp...
Generating docs for file create_ibfs_from_chopper_pack.hpp...
Generating docs for file hierarchical_build.hpp...
Generating docs for file insert_into_ibf.hpp...
Generating docs for file loop_over_children.hpp...
Generating docs for file node_data.hpp...
Generating docs for file parse_chopper_pack_header.hpp...
Generating docs for file parse_chopper_pack_line.hpp...
Generating docs for file read_chopper_pack_file.hpp...
Generating docs for file update_parent_kmers.hpp...
Generating docs for file update_user_bins.hpp...
Generating docs for file index_factory.hpp...
Generating docs for file max_count_per_partition.hpp...
Generating docs for file partition_config.hpp...
Generating docs for file raptor_build.hpp...
Generating docs for file store_index.hpp...
Generating docs for file call_parallel_on_bins.hpp...
Generating docs for file dna4_traits.hpp...
Generating docs for file file_reader.hpp...
Generating docs for file hierarchical_interleaved_bloom_filter.hpp...
Generating docs for file index.hpp...
Generating docs for file raptor_layout.hpp...
Generating docs for file compute_minimiser.hpp...
Generating docs for file cutoff.hpp...
Generating docs for file raptor.hpp...
Generating docs for file do_parallel.hpp...
Generating docs for file load_index.hpp...
Generating docs for file search.hpp...
Generating docs for file search_hibf.hpp...
Generating docs for file search_ibf.hpp...
Generating docs for file search_partitioned_ibf.hpp...
Generating docs for file search_singular_ibf.hpp...
Generating docs for file sync_out.hpp...
Generating docs for file strong_types.hpp...
Generating docs for file forward_strand_minimiser.hpp...
Generating docs for file logspace.hpp...
Generating docs for file multiple_error_model.hpp...
Generating docs for file one_error_model.hpp...
Generating docs for file one_indirect_error_model.hpp...
Generating docs for file pascal_row.hpp...
Generating docs for file precompute_correction.hpp...
Generating docs for file precompute_threshold.hpp...
Generating docs for file threshold.hpp...
Generating docs for file threshold_parameters.hpp...
Generating docs for file index_upgrader.hpp...
Generating docs for file upgrade.hpp...
Generating docs for file version.hpp...
Generating docs for file build_parsing.cpp...
Generating docs for file compute_bin_size.cpp...
Generating docs for file init_shared_meta.cpp...
Generating docs for file parse_bin_path.cpp...
Generating docs for file prepare_parsing.cpp...
Generating docs for file search_parsing.cpp...
Generating docs for file upgrade_parsing.cpp...
Generating docs for file build_ibf.cpp...
Generating docs for file bin_size_in_bits.cpp...
Generating docs for file chopper_build.cpp...
Generating docs for file compute_kmers.cpp...
Generating docs for file construct_ibf.cpp...
Generating docs for file create_ibfs_from_chopper_pack.cpp...
Generating docs for file hierarchical_build.cpp...
Generating docs for file insert_into_ibf.cpp...
Generating docs for file loop_over_children.cpp...
Generating docs for file parse_chopper_pack_header.cpp...
Generating docs for file parse_chopper_pack_line.cpp...
Generating docs for file read_chopper_pack_file.cpp...
Generating docs for file update_parent_kmers.cpp...
Generating docs for file update_user_bins.cpp...
Generating docs for file max_count_per_partition.cpp...
Generating docs for file raptor_build.cpp...
Generating docs for file raptor_layout.cpp...
Generating docs for file compute_minimiser.cpp...
Generating docs for file raptor.cpp...
Generating docs for file raptor_search.cpp...
Generating docs for file search_hibf.cpp...
Generating docs for file search_ibf.cpp...
Generating docs for file search_partitioned_ibf.cpp...
Generating docs for file multiple_error_model.cpp...
Generating docs for file one_error_model.cpp...
Generating docs for file one_indirect_error_model.cpp...
Generating docs for file pascal_row.cpp...
Generating docs for file precompute_correction.cpp...
Generating docs for file precompute_threshold.cpp...
Generating docs for file raptor_upgrade.cpp...
Generating page documentation...
Generating docs for page setup...
Generating docs for page tutorial_first_steps...
Generating docs for page tutorial_layout...
Generating docs for page tutorial_index...
Generating docs for page tutorial_search...
Generating docs for page md__2build_2reproducible-path_2seqan-raptor-3_80_81_09ds_2LICENSE...
Generating docs for page md__2build_2reproducible-path_2seqan-raptor-3_80_81_09ds_2CHANGELOG...
Generating group documentation...
Generating class documentation...
Generating concept documentation...
Generating module documentation...
Generating namespace documentation...
Generating docs for compound raptor::bin_validator...
Generating docs for compound raptor::build_arguments...
Generating docs for compound raptor::cutoff...
Generating docs for compound raptor::dna4_traits...
Generating docs for compound raptor::emplace_iterator...
Generating docs for compound raptor::file_reader...
Generating docs for compound raptor::file_reader< file_types::minimiser >...
Generating docs for compound raptor::file_reader< file_types::sequence >...
Generating docs for compound raptor::hierarchical_interleaved_bloom_filter...
Generating docs for nested compound raptor::hierarchical_interleaved_bloom_filter::counting_agent_type...
Generating docs for nested compound raptor::hierarchical_interleaved_bloom_filter::membership_agent_type...
Generating docs for nested compound raptor::hierarchical_interleaved_bloom_filter::user_bins...
Generating docs for compound raptor::index_factory...
Generating docs for compound raptor::index_upgrader...
Generating docs for compound raptor::output_directory_validator...
Generating docs for compound raptor::output_file_validator...
Generating docs for compound raptor::partition_config...
Generating docs for compound raptor::positive_integer_validator...
Generating docs for compound raptor::power_of_two_validator...
Generating docs for compound raptor::prepare_arguments...
Generating docs for compound raptor::raptor_index...
Generating docs for compound raptor::search_arguments...
Generating docs for compound raptor::sequence_file_validator...
Generating docs for compound raptor::size_validator...
Generating docs for compound raptor::sync_out...
Generating docs for compound raptor::timer...
Generating docs for compound raptor::upgrade_arguments...
Generating docs for compound raptor::window...
Generating docs for namespace raptor::hibf
Generating docs for compound raptor::hibf::build_data...
Generating docs for compound raptor::hibf::chopper_pack_record...
Generating docs for compound raptor::hibf::node_data...
Generating docs for concept raptor::index_structure::compressible_from...
Generating docs for concept raptor::index_structure::is_ibf...
Generating docs for concept raptor::index_structure::is_hibf...
Generating docs for concept raptor::index_structure::is_compressed...
Generating docs for compound raptor::logspace::add_fn...
Generating docs for compound raptor::threshold::forward_strand_minimiser...
Generating docs for compound raptor::threshold::threshold...
Generating docs for compound raptor::threshold::threshold_parameters...
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating namespace member index...
Generating concept index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
type lookup cache used 2392/65536 hits=11424 misses=2675
symbol lookup cache used 2956/65536 hits=16171 misses=2956
finished...
make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
[100%] Built target doc
make[3]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/CMakeFiles 0
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
cd doc_build/latex && /usr/bin/make
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/latex'
rm -f *.ps *.dvi *.aux *.toc *.idx *.ind *.ilg *.log *.out *.brf *.blg *.bbl refman.pdf
pdflatex refman
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./refman.tex
LaTeX2e <2024-11-01> patch level 1
L3 programming layer <2024-12-25>

makeindex refman.idx
This is makeindex, version 2.17 [TeX Live 2025/dev] (kpathsea + Thai support).
Scanning input file refman.idx....done (262 entries accepted, 0 rejected).
Sorting entries.....done (2170 comparisons).
Generating output file refman.ind....done (296 lines written, 0 warnings).
Output written in refman.ind.
Transcript written in refman.ilg.
pdflatex refman
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./refman.tex
LaTeX2e <2024-11-01> patch level 1
L3 programming layer <2024-12-25>

latex_count=8 ; \
while grep -E -s 'Rerun (LaTeX|to get cross-references right|to get bibliographical references right)' refman.log && [ $latex_count -gt 0 ] ;\
    do \
      echo "Rerunning latex...." ;\
      pdflatex refman ;\
      latex_count=`expr $latex_count - 1` ;\
    done
Package longtable Warning: Table widths have changed. Rerun LaTeX.
Rerunning latex....
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./refman.tex
LaTeX2e <2024-11-01> patch level 1
L3 programming layer <2024-12-25>

makeindex refman.idx
This is makeindex, version 2.17 [TeX Live 2025/dev] (kpathsea + Thai support).
Scanning input file refman.idx....done (262 entries accepted, 0 rejected).
Sorting entries.....done (2170 comparisons).
Generating output file refman.ind....done (296 lines written, 0 warnings).
Output written in refman.ind.
Transcript written in refman.ilg.
pdflatex refman
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./refman.tex
LaTeX2e <2024-11-01> patch level 1
L3 programming layer <2024-12-25>

make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/latex'
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   debian/rules override_dh_auto_test-arch
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_test --arch --builddirectory build_unit
	cd build_unit && make -j20 test ARGS\+=--verbose ARGS\+=-j20
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j20
UpdateCTestConfiguration  from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/DartConfiguration.tcl
UpdateCTestConfiguration  from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/DartConfiguration.tcl
Test project /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
Connected to MAKE jobserver
test 1
      Start  1: api/issue_142

1: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api/issue_142
1: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api
1: Test timeout computed to be: 10000000
test 2
      Start  2: api/memory_usage

2: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api/memory_usage
2: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api
2: Test timeout computed to be: 10000000
test 3
      Start  3: api/validate_shape

3: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api/validate_shape
3: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api
3: Test timeout computed to be: 10000000
test 4
      Start  4: cli/argument_parsing/options_test

4: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing/options_test
4: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing
4: Test timeout computed to be: 10000000
test 5
      Start  5: cli/build/build_hibf_chopper_test

5: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/build_hibf_chopper_test
5: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build
5: Test timeout computed to be: 10000000
test 6
      Start  6: cli/build/build_hibf_test

6: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/build_hibf_test
6: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build
6: Test timeout computed to be: 10000000
test 7
      Start  7: cli/build/build_ibf_compressed_test

7: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/build_ibf_compressed_test
7: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build
7: Test timeout computed to be: 10000000
test 8
      Start  8: cli/build/build_ibf_partitioned_test

8: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/build_ibf_partitioned_test
8: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build
8: Test timeout computed to be: 10000000
test 9
      Start  9: cli/build/build_ibf_test

9: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/build_ibf_test
9: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build
9: Test timeout computed to be: 10000000
test 10
      Start 10: cli/search/search_hibf_test

10: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/search_hibf_test
10: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search
10: Test timeout computed to be: 10000000
test 11
      Start 11: cli/search/search_hibf_preprocessing_test

11: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/search_hibf_preprocessing_test
11: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search
11: Test timeout computed to be: 10000000
test 12
      Start 12: cli/search/search_ibf_preprocessing_test

12: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/search_ibf_preprocessing_test
12: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search
12: Test timeout computed to be: 10000000
test 13
      Start 13: cli/search/search_ibf_test

13: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/search_ibf_test
13: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search
13: Test timeout computed to be: 10000000
test 14
      Start 14: cli/upgrade/upgrade_test

14: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade/upgrade_test
14: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade
14: Test timeout computed to be: 10000000
1: Running main() from ./googletest/src/gtest_main.cc
1: [==========] Running 1 test from 1 test suite.
1: [----------] Global test environment set-up.
1: [----------] 1 test from issue
1: [ RUN      ] issue.142
1: [       OK ] issue.142 (6 ms)
1: [----------] 1 test from issue (6 ms total)
1: 
1: [----------] Global test environment tear-down
1: [==========] 1 test from 1 test suite ran. (7 ms total)
1: [  PASSED  ] 1 test.
2: Running main() from ./googletest/src/gtest_main.cc
2: [==========] Running 8 tests from 1 test suite.
2: [----------] Global test environment set-up.
2: [----------] 8 tests from peak_ram
2: [ RUN      ] peak_ram.bytes
2: [       OK ] peak_ram.bytes (0 ms)
2: [ RUN      ] peak_ram.KiB
2: [       OK ] peak_ram.KiB (0 ms)
2: [ RUN      ] peak_ram.MiB
2: [       OK ] peak_ram.MiB (0 ms)
2: [ RUN      ] peak_ram.GiB
2: [       OK ] peak_ram.GiB (0 ms)
2: [ RUN      ] peak_ram.TiB
2: [       OK ] peak_ram.TiB (0 ms)
2: [ RUN      ] peak_ram.PiB
2: [       OK ] peak_ram.PiB (0 ms)
2: [ RUN      ] peak_ram.EiB
2: [       OK ] peak_ram.EiB (0 ms)
2: [ RUN      ] peak_ram.via_OS
2: [       OK ] peak_ram.via_OS (0 ms)
2: [----------] 8 tests from peak_ram (0 ms total)
2: 
2: [----------] Global test environment tear-down
2: [==========] 8 tests from 1 test suite ran. (0 ms total)
2: [  PASSED  ] 8 tests.
3: Running main() from ./googletest/src/gtest_main.cc
3: [==========] Running 1 test from 1 test suite.
3: [----------] Global test environment set-up.
3: [----------] 1 test from validate_shape
3: [ RUN      ] validate_shape.set_window_to_kmer
3: [       OK ] validate_shape.set_window_to_kmer (0 ms)
3: [----------] 1 test from validate_shape (0 ms total)
3: 
3: [----------] Global test environment tear-down
3: [==========] 1 test from 1 test suite ran. (0 ms total)
3: [  PASSED  ] 1 test.
4: Running main() from ./googletest/src/gtest_main.cc
4: [==========] Running 41 tests from 5 test suites.
4: [----------] Global test environment set-up.
4: [----------] 3 tests from argparse_main
4: [ RUN      ] argparse_main.no_options
4: [       OK ] argparse_main.no_options (10 ms)
4: [ RUN      ] argparse_main.no_subparser
4: [       OK ] argparse_main.no_subparser (12 ms)
4: [ RUN      ] argparse_main.unknown_option
5: Running main() from ./googletest/src/gtest_main.cc
5: [==========] Running 1 test from 1 test suite.
5: [----------] Global test environment set-up.
5: [----------] 1 test from build_hibf_layout
5: [ RUN      ] build_hibf_layout.pipeline
6: Running main() from ./googletest/src/gtest_main.cc
6: [==========] Running 26 tests from 2 test suites.
6: [----------] Global test environment set-up.
6: [----------] 2 tests from build_hibf
6: [ RUN      ] build_hibf.three_levels
7: Running main() from ./googletest/src/gtest_main.cc
7: [==========] Running 25 tests from 2 test suites.
7: [----------] Global test environment set-up.
7: [----------] 1 test from build_ibf_compressed
7: [ RUN      ] build_ibf_compressed.wrong_compression
7: [       OK ] build_ibf_compressed.wrong_compression (0 ms)
7: [----------] 1 test from build_ibf_compressed (0 ms total)
7: 
7: [----------] 24 tests from build_ibf_compressed_suite/build_ibf_compressed
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error
8: Running main() from ./googletest/src/gtest_main.cc
8: [==========] Running 25 tests from 2 test suites.
8: [----------] Global test environment set-up.
8: [----------] 1 test from build_ibf_partitioned
8: [ RUN      ] build_ibf_partitioned.pipeline_misc
9: Running main() from ./googletest/src/gtest_main.cc
9: [==========] Running 25 tests from 2 test suites.
9: [----------] Global test environment set-up.
9: [----------] 1 test from build_ibf
9: [ RUN      ] build_ibf.verbose
10: Running main() from ./googletest/src/gtest_main.cc
10: [==========] Running 37 tests from 2 test suites.
10: [----------] Global test environment set-up.
10: [----------] 1 test from search_hibf
10: [ RUN      ] search_hibf.three_levels
11: Running main() from ./googletest/src/gtest_main.cc
11: [==========] Running 49 tests from 2 test suites.
11: [----------] Global test environment set-up.
11: [----------] 1 test from search_hibf_preprocessing
11: [ RUN      ] search_hibf_preprocessing.pipeline_with_continuation
12: Running main() from ./googletest/src/gtest_main.cc
12: [==========] Running 49 tests from 2 test suites.
12: [----------] Global test environment set-up.
12: [----------] 1 test from search_ibf_preprocessing
12: [ RUN      ] search_ibf_preprocessing.pipeline_compressed_index
13: Running main() from ./googletest/src/gtest_main.cc
13: [==========] Running 38 tests from 2 test suites.
13: [----------] Global test environment set-up.
13: [----------] 2 tests from search_ibf
13: [ RUN      ] search_ibf.cache_thresholds
 1/14 Test  #1: api/issue_142 ...............................   Passed    0.05 sec
 2/14 Test  #2: api/memory_usage ............................   Passed    0.05 sec
 3/14 Test  #3: api/validate_shape ..........................   Passed    0.05 sec
14: Running main() from ./googletest/src/gtest_main.cc
14: [==========] Running 6 tests from 1 test suite.
14: [----------] Global test environment set-up.
14: [----------] 6 tests from upgrade
14: [ RUN      ] upgrade.via_fpr
4: [       OK ] argparse_main.unknown_option (27 ms)
4: [----------] 3 tests from argparse_main (50 ms total)
4: 
4: [----------] 20 tests from argparse_build
4: [ RUN      ] argparse_build.no_options
14: [       OK ] upgrade.via_fpr (17 ms)
14: [ RUN      ] upgrade.via_bin_path
4: [       OK ] argparse_build.no_options (12 ms)
4: [ RUN      ] argparse_build.input_missing
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error (56 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error
10: [       OK ] search_hibf.three_levels (47 ms)
10: [----------] 1 test from search_hibf (47 ms total)
10: 
10: [----------] 36 tests from search_hibf_suite/search_hibf
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error
4: [       OK ] argparse_build.input_missing (23 ms)
4: [ RUN      ] argparse_build.input_invalid
10: [       OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error (19 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error
12: [       OK ] search_ibf_preprocessing.pipeline_compressed_index (58 ms)
12: [----------] 1 test from search_ibf_preprocessing (58 ms total)
12: 
12: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error
4: [       OK ] argparse_build.input_invalid (21 ms)
4: [ RUN      ] argparse_build.output_missing
14: [       OK ] upgrade.via_bin_path (59 ms)
14: [ RUN      ] upgrade.via_bin_file
9: [       OK ] build_ibf.verbose (100 ms)
9: [----------] 1 test from build_ibf (100 ms total)
9: 
9: [----------] 24 tests from build_ibf_suite/build_ibf
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel
4: [       OK ] argparse_build.output_missing (16 ms)
4: [ RUN      ] argparse_build.kmer_window
13: [       OK ] search_ibf.cache_thresholds (91 ms)
13: [ RUN      ] search_ibf.verbose
10: [       OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error (37 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error (72 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error
4: [       OK ] argparse_build.kmer_window (14 ms)
4: [ RUN      ] argparse_build.kmer_shape
6: [       OK ] build_hibf.three_levels (141 ms)
6: [ RUN      ] build_hibf.verbose
9: [       OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel (37 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial
4: [       OK ] argparse_build.kmer_shape (24 ms)
4: [ RUN      ] argparse_build.zero_threads
13: [       OK ] search_ibf.verbose (41 ms)
13: [----------] 2 tests from search_ibf (132 ms total)
13: 
13: [----------] 36 tests from search_ibf_suite/search_ibf
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error
14: [       OK ] upgrade.via_bin_file (51 ms)
14: [ RUN      ] upgrade.compressed
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (82 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error
5: [       OK ] build_hibf_layout.pipeline (170 ms)
5: [----------] 1 test from build_hibf_layout (170 ms total)
5: 
5: [----------] Global test environment tear-down
5: [==========] 1 test from 1 test suite ran. (170 ms total)
5: [  PASSED  ] 1 test.
 4/14 Test  #5: cli/build/build_hibf_chopper_test ...........   Passed    0.18 sec
9: [       OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial (22 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel
4: [       OK ] argparse_build.zero_threads (14 ms)
4: [ RUN      ] argparse_build.no_bins_in_file
10: [       OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error (55 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error
14: [       OK ] upgrade.compressed (15 ms)
14: [ RUN      ] upgrade.partitioned_ibf_via_fpr
11: [       OK ] search_hibf_preprocessing.pipeline_with_continuation (164 ms)
11: [----------] 1 test from search_hibf_preprocessing (164 ms total)
11: 
11: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error (51 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error
8: [       OK ] build_ibf_partitioned.pipeline_misc (185 ms)
8: [----------] 1 test from build_ibf_partitioned (185 ms total)
8: 
8: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed
13: [       OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error (30 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error
4: [       OK ] argparse_build.no_bins_in_file (25 ms)
4: [ RUN      ] argparse_build.corrupted_input
9: [       OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel (28 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial
4: [       OK ] argparse_build.corrupted_input (16 ms)
4: [ RUN      ] argparse_build.empty_file_in_bin
13: [       OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error (29 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error
9: [       OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial (24 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel
14: [       OK ] upgrade.partitioned_ibf_via_fpr (49 ms)
14: [ RUN      ] upgrade.partitioned_ibf_via_bin_path
10: [       OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error (54 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error
4: [       OK ] argparse_build.empty_file_in_bin (20 ms)
4: [ RUN      ] argparse_build.mixed_input
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error (52 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (85 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error
10: [       OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error (24 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error
4: [       OK ] argparse_build.mixed_input (21 ms)
4: [ RUN      ] argparse_build.wrong_parts
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (72 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error
13: [       OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error (43 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error
4: [       OK ] argparse_build.wrong_parts (14 ms)
4: [ RUN      ] argparse_build.partitioned_parts
4: [       OK ] argparse_build.partitioned_parts (9 ms)
4: [ RUN      ] argparse_build.minimiser_and_shape
10: [       OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error (32 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error
4: [       OK ] argparse_build.minimiser_and_shape (14 ms)
4: [ RUN      ] argparse_build.minimiser_and_kmer
4: [       OK ] argparse_build.minimiser_and_kmer (13 ms)
4: [ RUN      ] argparse_build.minimiser_and_window
14: [       OK ] upgrade.partitioned_ibf_via_bin_path (84 ms)
14: [----------] 6 tests from upgrade (279 ms total)
14: 
14: [----------] Global test environment tear-down
14: [==========] 6 tests from 1 test suite ran. (279 ms total)
14: [  PASSED  ] 6 tests.
6: [       OK ] build_hibf.verbose (170 ms)
6: [----------] 2 tests from build_hibf (311 ms total)
6: 
6: [----------] 24 tests from build_hibf_suite/build_hibf
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel
 5/14 Test #14: cli/upgrade/upgrade_test ....................   Passed    0.29 sec
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error (78 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error
4: [       OK ] argparse_build.minimiser_and_window (12 ms)
4: [ RUN      ] argparse_build.layout_config_and_options
13: [       OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error (60 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel (13 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial
10: [       OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error (40 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (71 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error (76 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error
13: [       OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error (21 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error
9: [       OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel (129 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial
6: [       OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial (30 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel
4: [       OK ] argparse_build.layout_config_and_options (48 ms)
4: [ RUN      ] argparse_build.layout_too_small_window
13: [       OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error (23 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error
10: [       OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error (45 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel (20 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error (49 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error
4: [       OK ] argparse_build.layout_too_small_window (25 ms)
4: [ RUN      ] argparse_build.layout_config_missing
6: [       OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial (17 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error (81 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error
10: [       OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error (27 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error (79 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error
4: [       OK ] argparse_build.layout_config_missing (13 ms)
4: [ RUN      ] argparse_build.layout_config_missing_preprocessed
4: [       OK ] argparse_build.layout_config_missing_preprocessed (11 ms)
4: [----------] 20 tests from argparse_build (374 ms total)
4: 
4: [----------] 13 tests from argparse_search
4: [ RUN      ] argparse_search.no_options
13: [       OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error (63 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error
4: [       OK ] argparse_search.no_options (16 ms)
4: [ RUN      ] argparse_search.ibf_missing
10: [       OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error (36 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error
4: [       OK ] argparse_search.ibf_missing (12 ms)
4: [ RUN      ] argparse_search.ibf_wrong
6: [       OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel (54 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial
9: [       OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial (97 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel
4: [       OK ] argparse_search.ibf_wrong (12 ms)
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed (269 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed
4: [ RUN      ] argparse_search.query_missing
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error (58 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error
4: [       OK ] argparse_search.query_missing (9 ms)
4: [ RUN      ] argparse_search.query_wrong
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (94 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error (78 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error
13: [       OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error (43 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error
4: [       OK ] argparse_search.query_wrong (9 ms)
4: [ RUN      ] argparse_search.output_missing
10: [       OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error (53 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error
4: [       OK ] argparse_search.output_missing (12 ms)
4: [ RUN      ] argparse_search.old_index
13: [       OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error (15 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error
4: [       OK ] argparse_search.old_index (14 ms)
4: [ RUN      ] argparse_search.ambiguous_index
13: [       OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error (18 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial (63 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel
4: [       OK ] argparse_search.ambiguous_index (13 ms)
4: [ RUN      ] argparse_search.error_treshold
9: [       OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel (70 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial
4: [       OK ] argparse_search.error_treshold (9 ms)
4: [ RUN      ] argparse_search.empty_query
10: [       OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error (46 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error
4: [       OK ] argparse_search.empty_query (10 ms)
4: [ RUN      ] argparse_search.queries_too_short
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (74 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (75 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error (71 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error
4: [       OK ] argparse_search.queries_too_short (13 ms)
4: [ RUN      ] argparse_search.queries_have_variance
13: [       OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error (44 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error (19 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error (20 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel (72 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error (14 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error
4: [       OK ] argparse_search.queries_have_variance (43 ms)
4: [ RUN      ] argparse_search.queries_unsupported_length
9: [       OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial (74 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel
13: [       OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error (49 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error
4: [       OK ] argparse_search.queries_unsupported_length (16 ms)
4: [----------] 13 tests from argparse_search (193 ms total)
4: 
4: [----------] 3 tests from argparse_upgrade
4: [ RUN      ] argparse_upgrade.exclusive_options
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error (29 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error
4: [       OK ] argparse_upgrade.exclusive_options (8 ms)
4: [ RUN      ] argparse_upgrade.ambiguous_index
13: [       OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error (23 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error
4: [       OK ] argparse_upgrade.ambiguous_index (11 ms)
4: [ RUN      ] argparse_upgrade.unsupported_index
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error (92 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error (22 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (103 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error
4: [       OK ] argparse_upgrade.unsupported_index (14 ms)
4: [----------] 3 tests from argparse_upgrade (34 ms total)
4: 
4: [----------] 2 tests from argparse_prepare
4: [ RUN      ] argparse_prepare.no_options
6: [       OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial (64 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel
13: [       OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error (22 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error
4: [       OK ] argparse_prepare.no_options (9 ms)
4: [ RUN      ] argparse_prepare.cutoffs
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error (23 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error
4: [       OK ] argparse_prepare.cutoffs (12 ms)
4: [----------] 2 tests from argparse_prepare (21 ms total)
4: 
4: [----------] Global test environment tear-down
4: [==========] 41 tests from 5 test suites ran. (674 ms total)
4: [  PASSED  ] 41 tests.
 6/14 Test  #4: cli/argument_parsing/options_test ...........   Passed    0.68 sec
13: [       OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error (25 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error (145 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error (30 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error (24 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error (19 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error
9: [       OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel (123 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial
6: [       OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel (70 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial
13: [       OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error (27 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error (19 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error (93 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error (98 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed (291 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed
13: [       OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error (26 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error (32 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error (14 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error (18 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error (19 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (64 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error (17 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error (69 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error
10: [       OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error (20 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error (19 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error (22 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error (19 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error (153 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial (134 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel
10: [       OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error (22 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error
13: [       OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error (17 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (62 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (67 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error (16 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error (39 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error (16 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error (59 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error (38 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error (42 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (67 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel (90 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial
9: [       OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial (225 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel
10: [       OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error (19 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error (118 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error (49 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error (32 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error (76 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error (72 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error (55 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error (59 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error
9: [       OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel (120 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial
13: [       OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error (21 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error (75 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error (55 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error
6: [       OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial (157 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel
13: [       OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error (44 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel (16 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial
10: [       OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error (24 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial (16 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (135 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error (179 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel (14 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed (402 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed
10: [       OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error (31 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error (50 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial (18 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (94 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error (22 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error
10: [       OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error (41 ms)
10: [ RUN      ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error
13: [       OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error (24 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error
9: [       OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial (145 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel
6: [       OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel (59 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (89 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel (26 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial
10: [       OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error (47 ms)
10: [----------] 36 tests from search_hibf_suite/search_hibf (1181 ms total)
10: 
10: [----------] Global test environment tear-down
10: [==========] 37 tests from 2 test suites ran. (1228 ms total)
10: [  PASSED  ] 37 tests.
 7/14 Test #10: cli/search/search_hibf_test .................   Passed    1.24 sec
9: [       OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial (18 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel
13: [       OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error (50 ms)
13: [ RUN      ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (91 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial (46 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel
9: [       OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel (20 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error (139 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial (23 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel
13: [       OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error (43 ms)
13: [----------] 36 tests from search_ibf_suite/search_ibf (1142 ms total)
13: 
13: [----------] Global test environment tear-down
13: [==========] 38 tests from 2 test suites ran. (1275 ms total)
13: [  PASSED  ] 38 tests.
 8/14 Test #13: cli/search/search_ibf_test ..................   Passed    1.28 sec
6: [       OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel (44 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error (87 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error (79 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial (45 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel
9: [       OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel (93 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error (78 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error (133 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel (66 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error (83 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (70 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial (113 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (91 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error (119 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial (106 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed (405 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed
9: [       OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel (89 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (146 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel (83 ms)
6: [ RUN      ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (101 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error (138 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial (85 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error (71 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error (84 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error
6: [       OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial (107 ms)
6: [----------] 24 tests from build_hibf_suite/build_hibf (1419 ms total)
6: 
6: [----------] Global test environment tear-down
6: [==========] 26 tests from 2 test suites ran. (1731 ms total)
6: [  PASSED  ] 26 tests.
 9/14 Test  #6: cli/build/build_hibf_test ...................   Passed    1.74 sec
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error (62 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error (83 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel (125 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error (140 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (91 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (94 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (94 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error (125 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial (153 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (91 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error (88 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel (99 ms)
9: [ RUN      ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error (92 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error (81 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error (181 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error (86 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error (58 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error (43 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error
9: [       OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial (160 ms)
9: [----------] 24 tests from build_ibf_suite/build_ibf (2109 ms total)
9: 
9: [----------] Global test environment tear-down
9: [==========] 25 tests from 2 test suites ran. (2209 ms total)
9: [  PASSED  ] 25 tests.
10/14 Test  #9: cli/build/build_ibf_test ....................   Passed    2.22 sec
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error (57 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error (42 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed (696 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error (52 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error (155 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error (44 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error (44 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error (48 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error (85 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error (67 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error (141 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error (78 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error (86 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error (63 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error (75 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error (150 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error (73 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error (85 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error (55 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error (69 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error (93 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error (199 ms)
7: [ RUN      ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error (78 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error (90 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error (88 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed (707 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed
7: [       OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error (296 ms)
7: [----------] 24 tests from build_ibf_compressed_suite/build_ibf_compressed (3064 ms total)
7: 
7: [----------] Global test environment tear-down
7: [==========] 25 tests from 2 test suites ran. (3065 ms total)
7: [  PASSED  ] 25 tests.
11/14 Test  #7: cli/build/build_ibf_compressed_test .........   Passed    3.07 sec
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error (259 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error (224 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error (208 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error (224 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed (519 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error (154 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error (291 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error (133 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error (232 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error (203 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed (464 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error (116 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error (208 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error (172 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error (195 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error (163 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed (438 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error (158 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error (159 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error (175 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error (190 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error (166 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error (160 ms)
11: [ RUN      ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed (439 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error (132 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error
11: [       OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error (105 ms)
11: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing (4741 ms total)
11: 
11: [----------] Global test environment tear-down
11: [==========] 49 tests from 2 test suites ran. (4905 ms total)
11: [  PASSED  ] 49 tests.
12/14 Test #11: cli/search/search_hibf_preprocessing_test ...   Passed    4.91 sec
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error (119 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error (92 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error (85 ms)
12: [ RUN      ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error
12: [       OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error (113 ms)
12: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing (5195 ms total)
12: 
12: [----------] Global test environment tear-down
12: [==========] 49 tests from 2 test suites ran. (5254 ms total)
12: [  PASSED  ] 49 tests.
13/14 Test #12: cli/search/search_ibf_preprocessing_test ....   Passed    5.26 sec
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed (593 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed (549 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed (208 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed (222 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed (391 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed (342 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed (563 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed (531 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed (192 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed (181 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed (337 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed (369 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed (566 ms)
8: [ RUN      ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed
8: [       OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed (484 ms)
8: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned (10170 ms total)
8: 
8: [----------] Global test environment tear-down
8: [==========] 25 tests from 2 test suites ran. (10356 ms total)
8: [  PASSED  ] 25 tests.
14/14 Test  #8: cli/build/build_ibf_partitioned_test ........   Passed   10.36 sec

100% tests passed, 0 tests failed out of 14

Total Test time (real) =  10.38 sec
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit'
#dh_auto_test --arch --builddirectory build_performance
#dh_auto_test --arch --builddirectory build_header
dh_auto_test --arch --builddirectory build_snippet
	cd build_snippet && make -j20 test ARGS\+=--verbose ARGS\+=-j20
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j20
UpdateCTestConfiguration  from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/DartConfiguration.tcl
UpdateCTestConfiguration  from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/DartConfiguration.tcl
Test project /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
Connected to MAKE jobserver
test 1
    Start 1: snippet/hibf/bin_indices_of_ibf_snippet

1: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet
1: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
1: Environment variables: 
1:  SHARG_NO_VERSION_CHECK=0
1: Test timeout computed to be: 10000000
test 2
    Start 2: snippet/hibf/bin_indices_of_ibf_snippet_cmp_output

2: Test command: /usr/bin/cmake "-DTARGET_FILE=/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet" "-DSOURCE_FILE=/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.cpp" "-P" "/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/compare_snippet_output.cmake"
2: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
2: Environment variables: 
2:  SHARG_NO_VERSION_CHECK=0
2: Test timeout computed to be: 10000000
test 3
    Start 3: snippet/hibf/filename_of_user_bin_snippet

3: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet
3: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
3: Environment variables: 
3:  SHARG_NO_VERSION_CHECK=0
3: Test timeout computed to be: 10000000
test 4
    Start 4: snippet/hibf/filename_of_user_bin_snippet_cmp_output

4: Test command: /usr/bin/cmake "-DTARGET_FILE=/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet" "-DSOURCE_FILE=/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.cpp" "-P" "/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/compare_snippet_output.cmake"
4: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
4: Environment variables: 
4:  SHARG_NO_VERSION_CHECK=0
4: Test timeout computed to be: 10000000
test 5
    Start 5: snippet/snippet_main_snippet

5: Test command: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet
5: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
5: Environment variables: 
5:  SHARG_NO_VERSION_CHECK=0
5: Test timeout computed to be: 10000000
test 6
    Start 6: snippet/snippet_main_snippet_cmp_output

6: Test command: /usr/bin/cmake "-DTARGET_FILE=/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet" "-DSOURCE_FILE=/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.cpp" "-P" "/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/compare_snippet_output.cmake"
6: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet
6: Environment variables: 
6:  SHARG_NO_VERSION_CHECK=0
6: Test timeout computed to be: 10000000
1: User bin indices of 1-level-IBF: [1,2,3]
1: User bin indices of 2-level-IBF: [2,3]
3: Filename of user bin 0: path/example1.fasta
3: Filename of user bin 1: path/example2.fasta
3: Filename of user bin 2: path/example2.fasta
1/6 Test #1: snippet/hibf/bin_indices_of_ibf_snippet ................   Passed    0.02 sec
2/6 Test #3: snippet/hibf/filename_of_user_bin_snippet ..............   Passed    0.01 sec
3/6 Test #5: snippet/snippet_main_snippet ...........................   Passed    0.01 sec
2: -- TARGET_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet
2: -- SOURCE_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.cpp
2: -- ACTUAL_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet.out
2: -- EXPECTED_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.out
2: -- ACTUAL_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet.err
2: -- EXPECTED_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.err
4: -- TARGET_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet
4: -- SOURCE_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.cpp
4: -- ACTUAL_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet.out
4: -- EXPECTED_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.out
4: -- ACTUAL_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet.err
4: -- EXPECTED_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.err
2: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.out
6: -- TARGET_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet
6: -- SOURCE_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.cpp
6: -- ACTUAL_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet.out
6: -- EXPECTED_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.out
6: -- ACTUAL_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet.err
6: -- EXPECTED_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.err
4: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.out
6: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.out
6: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.err
4/6 Test #6: snippet/snippet_main_snippet_cmp_output ................   Passed    0.03 sec
5/6 Test #2: snippet/hibf/bin_indices_of_ibf_snippet_cmp_output .....   Passed    0.07 sec
6/6 Test #4: snippet/hibf/filename_of_user_bin_snippet_cmp_output ...   Passed    0.07 sec

100% tests passed, 0 tests failed out of 6

Total Test time (real) =   0.08 sec
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet'
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   debian/rules override_dh_auto_test-indep
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_test --builddirectory doc_build
	cd doc_build && make -j20 test ARGS\+=--verbose ARGS\+=-j20
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j20
UpdateCTestConfiguration  from :/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/DartConfiguration.tcl
UpdateCTestConfiguration  from :/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/DartConfiguration.tcl
Test project /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
Connected to MAKE jobserver
test 1
    Start 1: doc_no_warnings_test

1: Test command: /usr/bin/bash "-c" "
    /usr/bin/doxygen > doxygen.cout 2> doxygen.cerr;
    cat "doxygen.cerr";
    test ! -s "doxygen.cerr""
1: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build
1: Test timeout computed to be: 10000000
1/1 Test #1: doc_no_warnings_test .............   Passed    2.32 sec

100% tests passed, 0 tests failed out of 1

Total Test time (real) =   2.32 sec
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   create-stamp debian/debhelper-build-stamp
   dh_prep
   debian/rules override_dh_auto_install-indep
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_auto_install --indep --builddir doc_build
	cd doc_build && make -j20 install DESTDIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
/usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds/test/documentation -B/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build'
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   dh_auto_install -Nseqan-raptor-doc
	cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds -B/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /build/reproducible-path/seqan-raptor-3.0.1+ds/debian/tmp/usr/bin/raptor
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu'
   dh_install
   dh_installdocs
   dh_installchangelogs
   dh_installman
   dh_perl
   dh_link
   dh_strip_nondeterminism
   dh_compress
   dh_fixperms
   debian/rules override_dh_missing
make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
dh_missing --list-missing
make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds'
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
   dh_installdeb
   dh_gencontrol
   dh_md5sums
   dh_builddeb
dpkg-deb: building package 'seqan-raptor' in '../seqan-raptor_3.0.1+ds-9_amd64.deb'.
dpkg-deb: building package 'seqan-raptor-dbgsym' in '../seqan-raptor-dbgsym_3.0.1+ds-9_amd64.deb'.
dpkg-deb: building package 'seqan-raptor-doc' in '../seqan-raptor-doc_3.0.1+ds-9_all.deb'.
 dpkg-genbuildinfo --build=binary -O../seqan-raptor_3.0.1+ds-9_amd64.buildinfo
 dpkg-genchanges --build=binary -O../seqan-raptor_3.0.1+ds-9_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/351269/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/351269 and its subdirectories
I: Current time: Sun Mar 16 03:33:06 +14 2025
I: pbuilder-time-stamp: 1742045586