I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 17 01:40:18 +14 2025 I: pbuilder-time-stamp: 1765885218 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-emmet-core_0.76.2-1.dsc] I: copying [./python-emmet-core_0.76.2.orig.tar.gz] I: copying [./python-emmet-core_0.76.2-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Aug 11 07:25:04 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-emmet-core_0.76.2-1.dsc: no acceptable signature found dpkg-source: info: extracting python-emmet-core in python-emmet-core-0.76.2 dpkg-source: info: unpacking python-emmet-core_0.76.2.orig.tar.gz dpkg-source: info: unpacking python-emmet-core_0.76.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip_tests.patch dpkg-source: info: applying test_files_dir.patch dpkg-source: info: applying backup_version.patch dpkg-source: info: applying import_qchem_calc_types.patch dpkg-source: info: applying no_README.patch dpkg-source: info: applying skip_test_pymatgen_file_version_mismatch.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 16 11:40 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=60f1836534944f92a2baa93667432092 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2967159 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.tGLGH4WV/pbuilderrc_hqqX --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.tGLGH4WV/b2 --logfile b2/build.log python-emmet-core_0.76.2-1.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-setuptools, python3-setuptools-scm, python3-all, python3-pymatgen (>= 2023.10.11~), python3-monty (>= 2023.9.25~), python3-pydantic (>= 2.0~), python3-pydantic-settings (>= 2.0~), python3-pybtex (>= 0.24~), python3-typing-extensions (>= 3.7~), python3-spglib (>= 2.0.1~), python3-numpy, python3-pytest, python3-bson, python3-openbabel dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19970 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools-scm; however: Package python3-setuptools-scm is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-pymatgen (>= 2023.10.11~); however: Package python3-pymatgen is not installed. pbuilder-satisfydepends-dummy depends on python3-monty (>= 2023.9.25~); however: Package python3-monty is not installed. pbuilder-satisfydepends-dummy depends on python3-pydantic (>= 2.0~); however: Package python3-pydantic is not installed. pbuilder-satisfydepends-dummy depends on python3-pydantic-settings (>= 2.0~); however: Package python3-pydantic-settings is not installed. pbuilder-satisfydepends-dummy depends on python3-pybtex (>= 0.24~); however: Package python3-pybtex is not installed. pbuilder-satisfydepends-dummy depends on python3-typing-extensions (>= 3.7~); however: Package python3-typing-extensions is not installed. pbuilder-satisfydepends-dummy depends on python3-spglib (>= 2.0.1~); however: Package python3-spglib is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-bson; however: Package python3-bson is not installed. pbuilder-satisfydepends-dummy depends on python3-openbabel; however: Package python3-openbabel is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libinchi1.07{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmaeparser1{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libopenbabel7{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libproc2-0{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsymspg2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-annotated-types{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-brotli{a} python3-bson{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dnspython{a} python3-dotenv{a} python3-email-validator{a} python3-fastjsonschema{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-joblib{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-monty{a} python3-more-itertools{a} python3-mpmath{a} python3-nbformat{a} python3-networkx{a} python3-numpy{a} python3-openbabel{a} python3-packaging{a} python3-palettable{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-plotly{a} python3-pluggy{a} python3-pybtex{a} python3-pydantic{a} python3-pydantic-core{a} python3-pydantic-settings{a} python3-pymatgen{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-spglib{a} python3-sympy{a} python3-tabulate{a} python3-tenacity{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-uncertainties{a} python3-urllib3{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl linux-sysctl-defaults lynx psmisc python-monty-doc python3-ase python3-bottleneck python3-bs4 python3-bson-ext python3-cryptography python3-cssselect python3-gdal python3-h2 python3-html5lib python3-httpcore python3-httpx python3-jinja2 python3-json-pointer python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-pydot python3-pygments python3-pygraphviz python3-rfc3987 python3-simplejson python3-tables python3-tomli python3-uritemplate python3-vtk9 python3-webcolors shared-mime-info wget xdg-user-dirs 0 packages upgraded, 205 newly installed, 0 to remove and 0 not upgraded. Need to get 133 MB of archives. After unpacking 618 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.3-2 [105 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 63 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 69 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 74 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 75 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 76 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 79 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 80 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 81 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 82 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 83 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 85 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 86 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 74.1.2-2 [736 kB] Get: 87 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20241024 [109 kB] Get: 88 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 89 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get: 90 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get: 91 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 92 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 93 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 94 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 95 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 96 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 97 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] Get: 98 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 99 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 libinchi1.07 amd64 1.07.1+dfsg-4 [556 kB] Get: 102 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 103 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 104 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 105 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 106 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get: 107 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 108 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 109 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 libmaeparser1 amd64 1.3.1-1+b2 [94.0 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 libopenbabel7 amd64 3.1.1+dfsg-11+b1 [3251 kB] Get: 112 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 113 http://deb.debian.org/debian trixie/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 115 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get: 116 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 117 http://deb.debian.org/debian trixie/main amd64 libsymspg2 amd64 2.5.0-1 [196 kB] Get: 118 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 119 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 120 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 121 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 122 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 123 http://deb.debian.org/debian trixie/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get: 124 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 125 http://deb.debian.org/debian trixie/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 126 http://deb.debian.org/debian trixie/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 127 http://deb.debian.org/debian trixie/main amd64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 128 http://deb.debian.org/debian trixie/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 129 http://deb.debian.org/debian trixie/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 130 http://deb.debian.org/debian trixie/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 131 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 132 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 133 http://deb.debian.org/debian trixie/main amd64 python3-annotated-types all 0.7.0-1 [18.8 kB] Get: 134 http://deb.debian.org/debian trixie/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 135 http://deb.debian.org/debian trixie/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get: 136 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b5 [318 kB] Get: 137 http://deb.debian.org/debian trixie/main amd64 python3-bson all 4.10.1-2 [87.0 kB] Get: 138 http://deb.debian.org/debian trixie/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 139 http://deb.debian.org/debian trixie/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 140 http://deb.debian.org/debian trixie/main amd64 python3-charset-normalizer amd64 3.4.0-1 [118 kB] Get: 141 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 142 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.0-2 [215 kB] Get: 143 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 144 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 145 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 146 http://deb.debian.org/debian trixie/main amd64 python3-dnspython all 2.6.1-1 [161 kB] Get: 147 http://deb.debian.org/debian trixie/main amd64 python3-dotenv all 1.0.1-1 [26.6 kB] Get: 148 http://deb.debian.org/debian trixie/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 149 http://deb.debian.org/debian trixie/main amd64 python3-email-validator all 2.2.0-1 [31.6 kB] Get: 150 http://deb.debian.org/debian trixie/main amd64 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 151 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 152 http://deb.debian.org/debian trixie/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 153 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 154 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get: 155 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get: 156 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get: 157 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 158 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 159 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 160 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 161 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.54.1-4 [1429 kB] Get: 162 http://deb.debian.org/debian trixie/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 163 http://deb.debian.org/debian trixie/main amd64 python3-joblib all 1.3.2-5 [216 kB] Get: 164 http://deb.debian.org/debian trixie/main amd64 python3-rpds-py amd64 0.20.1-1 [252 kB] Get: 165 http://deb.debian.org/debian trixie/main amd64 python3-referencing all 0.35.1-1 [23.5 kB] Get: 166 http://deb.debian.org/debian trixie/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 167 http://deb.debian.org/debian trixie/main amd64 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 168 http://deb.debian.org/debian trixie/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 169 http://deb.debian.org/debian trixie/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 170 http://deb.debian.org/debian trixie/main amd64 python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 171 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.7-2 [60.9 kB] Get: 172 http://deb.debian.org/debian trixie/main amd64 python3-latexcodec all 3.0.0-1 [17.5 kB] Get: 173 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get: 174 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB] Get: 175 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.0-1 [103 kB] Get: 176 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get: 177 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get: 178 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 179 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get: 180 http://deb.debian.org/debian trixie/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-5 [4389 kB] Get: 181 http://deb.debian.org/debian trixie/main amd64 python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 182 http://deb.debian.org/debian trixie/main amd64 python3-pydantic-core amd64 2.23.4-2+b1 [1453 kB] Get: 183 http://deb.debian.org/debian trixie/main amd64 python3-pydantic amd64 2.9.2-2 [343 kB] Get: 184 http://deb.debian.org/debian trixie/main amd64 python3-tqdm all 4.66.5-1 [90.1 kB] Get: 185 http://deb.debian.org/debian trixie/main amd64 python3-monty all 2024.7.29-1 [43.1 kB] Get: 186 http://deb.debian.org/debian trixie/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 187 http://deb.debian.org/debian trixie/main amd64 python3-networkx all 3.2.1-4 [14.2 MB] Get: 188 http://deb.debian.org/debian trixie/main amd64 python3-openbabel amd64 3.1.1+dfsg-11+b1 [570 kB] Get: 189 http://deb.debian.org/debian trixie/main amd64 python3-palettable all 3.3.3-1 [69.7 kB] Get: 190 http://deb.debian.org/debian trixie/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 191 http://deb.debian.org/debian trixie/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 192 http://deb.debian.org/debian trixie/main amd64 python3-tenacity all 8.4.2+really8.4.1-1 [46.0 kB] Get: 193 http://deb.debian.org/debian trixie/main amd64 python3-plotly all 5.20.0+dfsg-1 [2726 kB] Get: 194 http://deb.debian.org/debian trixie/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 195 http://deb.debian.org/debian trixie/main amd64 python3-yaml amd64 6.0.2-1 [134 kB] Get: 196 http://deb.debian.org/debian trixie/main amd64 python3-pybtex all 0.24.0-4 [74.6 kB] Get: 197 http://deb.debian.org/debian trixie/main amd64 python3-pydantic-settings all 2.6.1-1 [40.8 kB] Get: 198 http://deb.debian.org/debian trixie/main amd64 python3-ruamel.yaml.clib amd64 0.2.8+ds-2 [130 kB] Get: 199 http://deb.debian.org/debian trixie/main amd64 python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get: 200 http://deb.debian.org/debian trixie/main amd64 python3-spglib amd64 2.5.0-1 [52.2 kB] Get: 201 http://deb.debian.org/debian trixie/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 202 http://deb.debian.org/debian trixie/main amd64 python3-uncertainties all 3.2.2-1 [54.7 kB] Get: 203 http://deb.debian.org/debian trixie/main amd64 python3-pymatgen amd64 2024.10.29+dfsg1-3 [2528 kB] Get: 204 http://deb.debian.org/debian trixie/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 205 http://deb.debian.org/debian trixie/main amd64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Fetched 133 MB in 10s (13.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19970 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.3-2_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-2) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.3-2) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20290 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... 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Setting up bsdextrautils (2.40.2-9) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libxcb-render0:amd64 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:amd64 (1.1.0-2+b5) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:amd64 (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:amd64 (2020.2-6+b2) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libmaeparser1:amd64 (1.3.1-1+b2) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Dec 16 11:41:50 UTC 2025. Universal Time is now: Tue Dec 16 11:41:50 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up libsymspg2:amd64 (2.5.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:amd64 (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libfribidi0:amd64 (1.0.15-1) ... Setting up libimagequant0:amd64 (2.18.0-1+b2) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... 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Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:amd64 (1.4.0-0.1+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libxft2:amd64 (2.3.6-1+b2) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up python3.12-tk (3.12.7-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up libraqm0:amd64 (0.10.1-1+b2) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... 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Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pydantic-core (2.23.4-2+b1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-openbabel (3.1.1+dfsg-11+b1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-tenacity (8.4.2+really8.4.1-1) ... Setting up python3-tqdm (4.66.5-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-ruamel.yaml.clib:amd64 (0.2.8+ds-2) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-latexcodec (3.0.0-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up python3-pydantic (2.9.2-2) ... Setting up python3-ruamel.yaml (0.18.6+ds-3) ... Setting up python3-pydantic-settings (2.6.1-1) ... Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-joblib (1.3.2-5) ... Setting up python3-networkx (3.2.1-4) ... Setting up python3-setuptools-scm (8.1.0-1) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-palettable (3.3.3-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-pybtex (0.24.0-4) ... Setting up python3-contourpy (1.3.0-2) ... Setting up python3-spglib (2.5.0-1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-uncertainties (3.2.2-1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-5) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-monty (2024.7.29-1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-plotly (5.20.0+dfsg-1) ... Setting up python3-fonttools (4.54.1-4) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3) ... Setting up python3-pymatgen (2024.10.29+dfsg1-3) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/python-emmet-core-0.76.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-emmet-core_0.76.2-1_source.changes dpkg-buildpackage: info: source package python-emmet-core dpkg-buildpackage: info: source version 0.76.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from python-emmet-core-0.76.2/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core * Building wheel... WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/emmet creating build/lib/emmet/core copying emmet/core/base.py -> build/lib/emmet/core copying emmet/core/similarity.py -> build/lib/emmet/core copying emmet/core/surface_properties.py -> build/lib/emmet/core copying emmet/core/corrected_entries.py -> build/lib/emmet/core copying emmet/core/optimade.py -> build/lib/emmet/core copying emmet/core/substrates.py -> build/lib/emmet/core copying emmet/core/chemenv.py -> build/lib/emmet/core copying emmet/core/magnetism.py -> build/lib/emmet/core copying emmet/core/oxidation_states.py -> build/lib/emmet/core copying emmet/core/alloys.py -> build/lib/emmet/core copying emmet/core/thermo.py -> build/lib/emmet/core copying emmet/core/spectrum.py -> build/lib/emmet/core copying emmet/core/robocrys.py -> build/lib/emmet/core copying emmet/core/common.py -> build/lib/emmet/core copying emmet/core/structure_group.py -> build/lib/emmet/core copying emmet/core/electronic_structure.py -> build/lib/emmet/core copying emmet/core/utils.py -> build/lib/emmet/core copying emmet/core/bonds.py -> build/lib/emmet/core copying emmet/core/xas.py -> build/lib/emmet/core copying emmet/core/dois.py -> build/lib/emmet/core copying emmet/core/summary.py -> build/lib/emmet/core copying emmet/core/xrd.py -> build/lib/emmet/core copying emmet/core/eos.py -> build/lib/emmet/core copying emmet/core/fermi.py -> build/lib/emmet/core copying emmet/core/symmetry.py -> build/lib/emmet/core copying emmet/core/tasks.py -> build/lib/emmet/core copying emmet/core/absorption.py -> build/lib/emmet/core copying emmet/core/math.py -> build/lib/emmet/core copying emmet/core/_general_store.py -> build/lib/emmet/core copying emmet/core/ml.py -> build/lib/emmet/core copying emmet/core/find_structure.py -> build/lib/emmet/core copying emmet/core/__init__.py -> build/lib/emmet/core copying emmet/core/_user_settings.py -> build/lib/emmet/core copying emmet/core/material.py -> build/lib/emmet/core copying emmet/core/mpid.py -> build/lib/emmet/core copying emmet/core/task.py -> build/lib/emmet/core copying emmet/core/material_property.py -> build/lib/emmet/core copying emmet/core/provenance.py -> build/lib/emmet/core copying emmet/core/_messages.py -> build/lib/emmet/core copying emmet/core/settings.py -> build/lib/emmet/core copying emmet/core/elasticity_legacy.py -> build/lib/emmet/core copying emmet/core/elasticity.py -> build/lib/emmet/core copying emmet/core/charge_density.py -> build/lib/emmet/core copying emmet/core/polar.py -> build/lib/emmet/core copying emmet/core/phonon.py -> build/lib/emmet/core copying emmet/core/formula_autocomplete.py -> build/lib/emmet/core copying emmet/core/structure.py -> build/lib/emmet/core copying emmet/core/mpcomplete.py -> build/lib/emmet/core copying emmet/core/molecules_jcesr.py -> build/lib/emmet/core copying emmet/core/stubs.py -> build/lib/emmet/core copying emmet/core/electrode.py -> build/lib/emmet/core copying emmet/core/grain_boundary.py -> build/lib/emmet/core copying emmet/core/qc_tasks.py -> build/lib/emmet/core creating build/lib/emmet/core/mobility copying emmet/core/mobility/migrationgraph.py -> build/lib/emmet/core/mobility creating build/lib/emmet/core/vasp copying emmet/core/vasp/task_valid.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/calculation.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/__init__.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/material.py -> build/lib/emmet/core/vasp copying emmet/core/vasp/validation.py -> build/lib/emmet/core/vasp creating build/lib/emmet/core/molecules copying emmet/core/molecules/redox.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/orbitals.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/metal_binding.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/thermo.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/atomic.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/molecule_property.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/bonds.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/summary.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/__init__.py -> build/lib/emmet/core/molecules copying emmet/core/molecules/vibration.py -> build/lib/emmet/core/molecules creating build/lib/emmet/core/synthesis copying emmet/core/synthesis/materials.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/operations.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/core.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/__init__.py -> build/lib/emmet/core/synthesis copying emmet/core/synthesis/reaction.py -> build/lib/emmet/core/synthesis creating build/lib/emmet/core/qchem copying emmet/core/qchem/calculation.py -> build/lib/emmet/core/qchem copying emmet/core/qchem/__init__.py -> build/lib/emmet/core/qchem copying emmet/core/qchem/molecule.py -> build/lib/emmet/core/qchem copying emmet/core/qchem/task.py -> build/lib/emmet/core/qchem creating build/lib/emmet/core/feff copying emmet/core/feff/__init__.py -> build/lib/emmet/core/feff copying emmet/core/feff/task.py -> build/lib/emmet/core/feff creating build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/utils.py -> build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/enums.py -> build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/generate.py -> build/lib/emmet/core/vasp/calc_types copying emmet/core/vasp/calc_types/__init__.py -> build/lib/emmet/core/vasp/calc_types creating build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/utils.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/enums.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/generate.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/__init__.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/calc_types.py -> build/lib/emmet/core/qchem/calc_types copying emmet/core/qchem/calc_types/em_utils.py -> build/lib/emmet/core/qchem/calc_types running egg_info writing emmet_core.egg-info/PKG-INFO writing dependency_links to emmet_core.egg-info/dependency_links.txt writing requirements to emmet_core.egg-info/requires.txt writing top-level names to emmet_core.egg-info/top_level.txt reading manifest file 'emmet_core.egg-info/SOURCES.txt' writing manifest file 'emmet_core.egg-info/SOURCES.txt' copying emmet/core/vasp/calc_types/run_types.yaml -> build/lib/emmet/core/vasp/calc_types installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/emmet creating build/bdist.linux-x86_64/wheel/emmet/core copying build/lib/emmet/core/base.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/similarity.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/surface_properties.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/corrected_entries.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/optimade.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/substrates.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/chemenv.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/magnetism.py -> build/bdist.linux-x86_64/wheel/./emmet/core creating build/bdist.linux-x86_64/wheel/emmet/core/mobility copying build/lib/emmet/core/mobility/migrationgraph.py -> build/bdist.linux-x86_64/wheel/./emmet/core/mobility copying build/lib/emmet/core/oxidation_states.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/alloys.py -> build/bdist.linux-x86_64/wheel/./emmet/core creating build/bdist.linux-x86_64/wheel/emmet/core/vasp copying build/lib/emmet/core/vasp/task_valid.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp copying build/lib/emmet/core/vasp/calculation.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp copying build/lib/emmet/core/vasp/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp copying build/lib/emmet/core/vasp/material.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp creating build/bdist.linux-x86_64/wheel/emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/utils.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/run_types.yaml -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/enums.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/generate.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/calc_types/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp/calc_types copying build/lib/emmet/core/vasp/validation.py -> build/bdist.linux-x86_64/wheel/./emmet/core/vasp copying build/lib/emmet/core/thermo.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/spectrum.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/robocrys.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/common.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/structure_group.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/electronic_structure.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/utils.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/bonds.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/xas.py -> build/bdist.linux-x86_64/wheel/./emmet/core creating build/bdist.linux-x86_64/wheel/emmet/core/molecules copying build/lib/emmet/core/molecules/redox.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/orbitals.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/metal_binding.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/thermo.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/atomic.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/molecule_property.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/bonds.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/summary.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules copying build/lib/emmet/core/molecules/vibration.py -> build/bdist.linux-x86_64/wheel/./emmet/core/molecules creating build/bdist.linux-x86_64/wheel/emmet/core/synthesis copying build/lib/emmet/core/synthesis/materials.py -> build/bdist.linux-x86_64/wheel/./emmet/core/synthesis copying build/lib/emmet/core/synthesis/operations.py -> build/bdist.linux-x86_64/wheel/./emmet/core/synthesis copying build/lib/emmet/core/synthesis/core.py -> build/bdist.linux-x86_64/wheel/./emmet/core/synthesis copying build/lib/emmet/core/synthesis/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/synthesis copying build/lib/emmet/core/synthesis/reaction.py -> build/bdist.linux-x86_64/wheel/./emmet/core/synthesis copying build/lib/emmet/core/dois.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/summary.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/xrd.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/eos.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/fermi.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/symmetry.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/tasks.py -> build/bdist.linux-x86_64/wheel/./emmet/core creating build/bdist.linux-x86_64/wheel/emmet/core/qchem copying build/lib/emmet/core/qchem/calculation.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem copying build/lib/emmet/core/qchem/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem copying build/lib/emmet/core/qchem/molecule.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem copying build/lib/emmet/core/qchem/task.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem creating build/bdist.linux-x86_64/wheel/emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/utils.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/enums.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/generate.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/calc_types.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem/calc_types copying build/lib/emmet/core/qchem/calc_types/em_utils.py -> build/bdist.linux-x86_64/wheel/./emmet/core/qchem/calc_types copying build/lib/emmet/core/absorption.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/math.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/_general_store.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/ml.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/find_structure.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/_user_settings.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/material.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/mpid.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/task.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/material_property.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/provenance.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/_messages.py -> build/bdist.linux-x86_64/wheel/./emmet/core creating build/bdist.linux-x86_64/wheel/emmet/core/feff copying build/lib/emmet/core/feff/__init__.py -> build/bdist.linux-x86_64/wheel/./emmet/core/feff copying build/lib/emmet/core/feff/task.py -> build/bdist.linux-x86_64/wheel/./emmet/core/feff copying build/lib/emmet/core/settings.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/elasticity_legacy.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/elasticity.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/charge_density.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/polar.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/phonon.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/formula_autocomplete.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/structure.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/mpcomplete.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/molecules_jcesr.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/stubs.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/electrode.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/grain_boundary.py -> build/bdist.linux-x86_64/wheel/./emmet/core copying build/lib/emmet/core/qc_tasks.py -> build/bdist.linux-x86_64/wheel/./emmet/core running install_egg_info Copying emmet_core.egg-info to build/bdist.linux-x86_64/wheel/./emmet_core-0.76.2.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/emmet_core-0.76.2.dist-info/WHEEL creating '/build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/.tmp-x93w_kno/emmet_core-0.76.2-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'emmet/core/__init__.py' adding 'emmet/core/_general_store.py' adding 'emmet/core/_messages.py' adding 'emmet/core/_user_settings.py' adding 'emmet/core/absorption.py' adding 'emmet/core/alloys.py' adding 'emmet/core/base.py' adding 'emmet/core/bonds.py' adding 'emmet/core/charge_density.py' adding 'emmet/core/chemenv.py' adding 'emmet/core/common.py' adding 'emmet/core/corrected_entries.py' adding 'emmet/core/dois.py' adding 'emmet/core/elasticity.py' adding 'emmet/core/elasticity_legacy.py' adding 'emmet/core/electrode.py' adding 'emmet/core/electronic_structure.py' adding 'emmet/core/eos.py' adding 'emmet/core/fermi.py' adding 'emmet/core/find_structure.py' adding 'emmet/core/formula_autocomplete.py' adding 'emmet/core/grain_boundary.py' adding 'emmet/core/magnetism.py' adding 'emmet/core/material.py' adding 'emmet/core/material_property.py' adding 'emmet/core/math.py' adding 'emmet/core/ml.py' adding 'emmet/core/molecules_jcesr.py' adding 'emmet/core/mpcomplete.py' adding 'emmet/core/mpid.py' adding 'emmet/core/optimade.py' adding 'emmet/core/oxidation_states.py' adding 'emmet/core/phonon.py' adding 'emmet/core/polar.py' adding 'emmet/core/provenance.py' adding 'emmet/core/qc_tasks.py' adding 'emmet/core/robocrys.py' adding 'emmet/core/settings.py' adding 'emmet/core/similarity.py' adding 'emmet/core/spectrum.py' adding 'emmet/core/structure.py' adding 'emmet/core/structure_group.py' adding 'emmet/core/stubs.py' adding 'emmet/core/substrates.py' adding 'emmet/core/summary.py' adding 'emmet/core/surface_properties.py' adding 'emmet/core/symmetry.py' adding 'emmet/core/task.py' adding 'emmet/core/tasks.py' adding 'emmet/core/thermo.py' adding 'emmet/core/utils.py' adding 'emmet/core/xas.py' adding 'emmet/core/xrd.py' adding 'emmet/core/feff/__init__.py' adding 'emmet/core/feff/task.py' adding 'emmet/core/mobility/migrationgraph.py' adding 'emmet/core/molecules/__init__.py' adding 'emmet/core/molecules/atomic.py' adding 'emmet/core/molecules/bonds.py' adding 'emmet/core/molecules/metal_binding.py' adding 'emmet/core/molecules/molecule_property.py' adding 'emmet/core/molecules/orbitals.py' adding 'emmet/core/molecules/redox.py' adding 'emmet/core/molecules/summary.py' adding 'emmet/core/molecules/thermo.py' adding 'emmet/core/molecules/vibration.py' adding 'emmet/core/qchem/__init__.py' adding 'emmet/core/qchem/calculation.py' adding 'emmet/core/qchem/molecule.py' adding 'emmet/core/qchem/task.py' adding 'emmet/core/qchem/calc_types/__init__.py' adding 'emmet/core/qchem/calc_types/calc_types.py' adding 'emmet/core/qchem/calc_types/em_utils.py' adding 'emmet/core/qchem/calc_types/enums.py' adding 'emmet/core/qchem/calc_types/generate.py' adding 'emmet/core/qchem/calc_types/utils.py' adding 'emmet/core/synthesis/__init__.py' adding 'emmet/core/synthesis/core.py' adding 'emmet/core/synthesis/materials.py' adding 'emmet/core/synthesis/operations.py' adding 'emmet/core/synthesis/reaction.py' adding 'emmet/core/vasp/__init__.py' adding 'emmet/core/vasp/calculation.py' adding 'emmet/core/vasp/material.py' adding 'emmet/core/vasp/task_valid.py' adding 'emmet/core/vasp/validation.py' adding 'emmet/core/vasp/calc_types/__init__.py' adding 'emmet/core/vasp/calc_types/enums.py' adding 'emmet/core/vasp/calc_types/generate.py' adding 'emmet/core/vasp/calc_types/run_types.yaml' adding 'emmet/core/vasp/calc_types/utils.py' adding 'emmet_core-0.76.2.dist-info/METADATA' adding 'emmet_core-0.76.2.dist-info/WHEEL' adding 'emmet_core-0.76.2.dist-info/top_level.txt' adding 'emmet_core-0.76.2.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Successfully built emmet_core-0.76.2-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/python-emmet-core-0.76.2' set -e; \ for py in 3.12; do \ SKIP_TESTS=""; \ list_initialised=0; \ for t in test_from_url test_seriallization test_task_doc; do \ if [ ${list_initialised} = 0 ]; then \ SKIP_TESTS=$t; \ list_initialised=1; \ else \ SKIP_TESTS="${SKIP_TESTS} or $t"; \ fi; \ done; \ if [ "x${SKIP_TESTS}" != "x" ]; then \ SKIP_TESTS="not ( ${SKIP_TESTS} )"; \ fi; \ echo "skipping tests: ${SKIP_TESTS}"; \ pybuilddir=`pybuild --pyver $py --print build_dir | awk '{print $3}'`; \ testdir=/build/reproducible-path/python-emmet-core-0.76.2/.pybuild/test_python$py; \ mkdir $testdir; cp -a tests $testdir; \ cd $testdir; \ PMG_TEST_FILES_DIR=/build/reproducible-path/python-emmet-core-0.76.2/debian/test_files PYTHONPATH=$pybuilddir \ python$py -m pytest -v -k "${SKIP_TESTS}" $testdir; \ done skipping tests: not ( test_from_url or test_seriallization or test_task_doc ) ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 cachedir: .pytest_cache rootdir: /build/reproducible-path/python-emmet-core-0.76.2 plugins: typeguard-4.4.1 collecting ... collected 186 items / 7 deselected / 3 skipped / 179 selected tests/molecules/test_atomic.py::test_partial_charges PASSED [ 0%] tests/molecules/test_atomic.py::test_partial_spins PASSED [ 1%] tests/molecules/test_bonds.py::test_bonding PASSED [ 1%] tests/molecules/test_metal_binding.py::test_metal_binding PASSED [ 2%] tests/molecules/test_mol_thermo.py::test_thermo PASSED [ 2%] tests/molecules/test_orbitals.py::test_orbital PASSED [ 3%] tests/molecules/test_redox.py::test_redox SKIPPED (could not import ...) [ 3%] tests/molecules/test_summary.py::test_summary_doc PASSED [ 4%] tests/molecules/test_vibration.py::test_vibration PASSED [ 5%] tests/qchem/test_molecules.py::test_make_mol SKIPPED (Pymatgen OBAli...) [ 5%] tests/qchem/test_molecules.py::test_make_deprecated_mol SKIPPED (Pym...) [ 6%] tests/qchem/test_molecules.py::test_schema PASSED [ 6%] tests/qchem/test_qchem.py::test_task_type PASSED [ 7%] tests/qchem/test_qchem.py::test_level_of_theory PASSED [ 7%] tests/qchem/test_qchem.py::test_solvent PASSED [ 8%] tests/qchem/test_qchem.py::test_lot_solv PASSED [ 8%] tests/qchem/test_qchem.py::test_unexpected_lots PASSED [ 9%] tests/qchem/test_qchem.py::test_computed_entry PASSED [ 10%] tests/test_absorption.py::test_absorption_doc PASSED [ 10%] tests/test_calculation.py::test_init PASSED [ 11%] tests/test_calculation.py::test_calculation_input[SiOptimizeDouble] PASSED [ 11%] tests/test_calculation.py::test_calculation_input[SiStatic] PASSED [ 12%] tests/test_calculation.py::test_calculation_input[SiNonSCFUniform] PASSED [ 12%] tests/test_calculation.py::test_calculation_output[SiOptimizeDouble] PASSED [ 13%] tests/test_calculation.py::test_calculation_output[SiStatic] PASSED [ 13%] tests/test_calculation.py::test_calculation_output[SiNonSCFUniform] PASSED [ 14%] tests/test_calculation.py::test_mag_calculation_output PASSED [ 15%] tests/test_calculation.py::test_run_statistics[SiOptimizeDouble] PASSED [ 15%] tests/test_calculation.py::test_run_statistics[SiStatic] PASSED [ 16%] tests/test_calculation.py::test_run_statistics[SiNonSCFUniform] PASSED [ 16%] tests/test_calculation.py::test_calculation[SiOptimizeDouble] PASSED [ 17%] tests/test_calculation.py::test_calculation[SiStatic] PASSED [ 17%] tests/test_calculation.py::test_calculation[SiNonSCFUniform] PASSED [ 18%] tests/test_calculation.py::test_PotcarSpec PASSED [ 18%] tests/test_chemenv.py::test_chemenv[structure0] PASSED [ 19%] tests/test_chemenv.py::test_chemenv[structure1] PASSED [ 20%] tests/test_chemenv.py::test_chemenv[structure2] PASSED [ 20%] tests/test_chemenv.py::test_chemenv[structure3] PASSED [ 21%] tests/test_chemenv.py::test_chemenv[structure4] PASSED [ 21%] tests/test_chemenv.py::test_chemenv[structure5] PASSED [ 22%] tests/test_chemenv.py::test_chemenv[structure6] PASSED [ 22%] tests/test_chemenv.py::test_chemenv[structure7] PASSED [ 23%] tests/test_chemenv.py::test_chemenv[structure8] PASSED [ 24%] tests/test_chemenv.py::test_chemenv[structure9] PASSED [ 24%] tests/test_chemenv.py::test_chemenv[structure10] PASSED [ 25%] tests/test_chemenv.py::test_chemenv[structure11] PASSED [ 25%] tests/test_chemenv.py::test_chemenv[structure12] PASSED [ 26%] tests/test_chemenv.py::test_chemenv[structure13] PASSED [ 26%] tests/test_elasticity.py::test_generate_derived_fitting_data PASSED [ 27%] tests/test_elasticity.py::test_from_deformations_and_stresses PASSED [ 27%] tests/test_electrodes.py::test_InsertionDocs PASSED [ 28%] tests/test_electrodes.py::test_ConversionDocs_from_entries PASSED [ 29%] tests/test_electrodes.py::test_ConversionDocs_from_composition_and_pd PASSED [ 29%] tests/test_electrodes.py::test_ConversionDocs_from_sub_electrodes PASSED [ 30%] tests/test_electrodes.py::test_get_battery_formula PASSED [ 30%] tests/test_electronic_structure.py::test_from_bsdos_1 SKIPPED (could...) [ 31%] tests/test_electronic_structure.py::test_from_bsdos_2 SKIPPED (could...) [ 31%] tests/test_magnetism.py::test_magnetism_doc PASSED [ 32%] tests/test_molecule_metadata.py::test_from_molecule PASSED [ 32%] tests/test_molecule_metadata.py::test_from_comp PASSED [ 33%] tests/test_mpid.py::test_mpid PASSED [ 34%] tests/test_mpid.py::test_mpculeid PASSED [ 34%] tests/test_mpid.py::test_to_str PASSED [ 35%] tests/test_oxidation_states.py::test_oxidation_state[structure0] PASSED [ 35%] tests/test_oxidation_states.py::test_oxidation_state[structure1] PASSED [ 36%] tests/test_oxidation_states.py::test_oxidation_state[structure2] PASSED [ 36%] tests/test_oxidation_states.py::test_oxidation_state[structure3] PASSED [ 37%] tests/test_oxidation_states.py::test_oxidation_state[structure4] PASSED [ 37%] tests/test_oxidation_states.py::test_oxidation_state[structure5] PASSED [ 38%] tests/test_oxidation_states.py::test_oxidation_state[structure6] PASSED [ 39%] tests/test_oxidation_states.py::test_oxidation_state[structure7] PASSED [ 39%] tests/test_oxidation_states.py::test_oxidation_state[structure8] PASSED [ 40%] tests/test_oxidation_states.py::test_oxidation_state[structure9] PASSED [ 40%] tests/test_oxidation_states.py::test_oxidation_state[structure10] PASSED [ 41%] tests/test_oxidation_states.py::test_oxidation_state[structure11] PASSED [ 41%] tests/test_oxidation_states.py::test_oxidation_state[structure12] PASSED [ 42%] tests/test_oxidation_states.py::test_oxidation_state[structure13] PASSED [ 43%] tests/test_polar.py::test_dielectric PASSED [ 43%] tests/test_polar.py::test_piezoelectric PASSED [ 44%] tests/test_provenance.py::test_from_snls PASSED [ 44%] tests/test_qc_task.py::test_input_summary[SinglePointTest] SKIPPED (...) [ 45%] tests/test_qc_task.py::test_input_summary[OptimizationTest] SKIPPED [ 45%] tests/test_qc_task.py::test_output_summary[SinglePointTest] SKIPPED [ 46%] tests/test_qc_task.py::test_output_summary[OptimizationTest] SKIPPED [ 46%] tests/test_robocrys.py::test_robocrys[structure0] SKIPPED (Skip unti...) [ 47%] tests/test_robocrys.py::test_robocrys[structure1] SKIPPED (Skip unti...) [ 48%] tests/test_robocrys.py::test_robocrys[structure2] SKIPPED (Skip unti...) [ 48%] tests/test_robocrys.py::test_robocrys[structure3] SKIPPED (Skip unti...) [ 49%] tests/test_robocrys.py::test_robocrys[structure4] SKIPPED (Skip unti...) [ 49%] tests/test_robocrys.py::test_robocrys[structure5] SKIPPED (Skip unti...) [ 50%] tests/test_robocrys.py::test_robocrys[structure6] SKIPPED (Skip unti...) [ 50%] tests/test_robocrys.py::test_robocrys[structure7] SKIPPED (Skip unti...) [ 51%] tests/test_robocrys.py::test_robocrys[structure8] SKIPPED (Skip unti...) 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[100%] =============================== warnings summary =============================== ../cpython3_3.12_emmet-core/build/emmet/core/vasp/calculation.py:290 /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/vasp/calculation.py:290: PydanticDeprecatedSince20: `pydantic.config.Extra` is deprecated, use literal values instead (e.g. `extra='allow'`). Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.9/migration/ class ElectronicStep(BaseModel, extra=Extra.allow): # type: ignore ../cpython3_3.12_emmet-core/build/emmet/core/vasp/calculation.py:314 /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/vasp/calculation.py:314: PydanticDeprecatedSince20: `pydantic.config.Extra` is deprecated, use literal values instead (e.g. `extra='allow'`). Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.9/migration/ class IonicStep(BaseModel, extra=Extra.allow): # type: ignore ../../../../../usr/lib/python3/dist-packages/pymatgen/analysis/gb/grain.py:7 /usr/lib/python3/dist-packages/pymatgen/analysis/gb/grain.py:7: DeprecationWarning: Grain boundary analysis has been moved to pymatgen.core.interface.This stub is retained for backwards compatibility and will be removed Dec 31 2024. warnings.warn( ../../../../../usr/lib/python3/dist-packages/pybtex/plugin/__init__.py:26 /usr/lib/python3/dist-packages/pybtex/plugin/__init__.py:26: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources .pybuild/test_python3.12/tests/molecules/test_atomic.py: 24 warnings .pybuild/test_python3.12/tests/molecules/test_bonds.py: 15 warnings .pybuild/test_python3.12/tests/molecules/test_metal_binding.py: 2 warnings .pybuild/test_python3.12/tests/molecules/test_mol_thermo.py: 12 warnings .pybuild/test_python3.12/tests/molecules/test_orbitals.py: 8 warnings .pybuild/test_python3.12/tests/molecules/test_summary.py: 2 warnings .pybuild/test_python3.12/tests/molecules/test_vibration.py: 8 warnings .pybuild/test_python3.12/tests/qchem/test_qchem.py: 10 warnings .pybuild/test_python3.12/tests/test_absorption.py: 2 warnings .pybuild/test_python3.12/tests/test_chemenv.py: 28 warnings .pybuild/test_python3.12/tests/test_elasticity.py: 2 warnings .pybuild/test_python3.12/tests/test_magnetism.py: 20 warnings .pybuild/test_python3.12/tests/test_molecule_metadata.py: 2 warnings .pybuild/test_python3.12/tests/test_oxidation_states.py: 28 warnings .pybuild/test_python3.12/tests/test_polar.py: 4 warnings .pybuild/test_python3.12/tests/test_provenance.py: 4 warnings .pybuild/test_python3.12/tests/test_structure_metadata.py: 4 warnings .pybuild/test_python3.12/tests/test_thermo.py: 10 warnings .pybuild/test_python3.12/tests/test_xrd.py: 96 warnings .pybuild/test_python3.12/tests/vasp/test_materials.py: 10 warnings .pybuild/test_python3.12/tests/vasp/test_vasp.py: 18 warnings /usr/lib/python3/dist-packages/pydantic/main.py:212: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). validated_self = self.__pydantic_validator__.validate_python(data, self_instance=self) .pybuild/test_python3.12/tests/molecules/test_bonds.py::test_bonding /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/utils.py:169: FutureWarning: with_local_env_strategy is deprecated, and will be removed on 2025-03-20 Use from_local_env_strategy in pymatgen.analysis.graphs instead. Deprecated on 2024-03-29. mol_graph = MoleculeGraph.with_local_env_strategy(mol, OpenBabelNN()) .pybuild/test_python3.12/tests/molecules/test_bonds.py::test_bonding /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/molecules/bonds.py:278: FutureWarning: with_empty_graph is deprecated, and will be removed on 2025-03-20 Use from_empty_graph in pymatgen.analysis.graphs instead. Deprecated on 2024-03-29. mg = MoleculeGraph.with_empty_graph(mol) .pybuild/test_python3.12/tests/qchem/test_molecules.py::test_schema .pybuild/test_python3.12/tests/test_structure_metadata.py::test_schema .pybuild/test_python3.12/tests/test_xrd.py::test_schema .pybuild/test_python3.12/tests/vasp/test_materials.py::test_schema /usr/lib/python3/dist-packages/pydantic/main.py:1355: PydanticDeprecatedSince20: The `schema` method is deprecated; use `model_json_schema` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.9/migration/ warnings.warn( .pybuild/test_python3.12/tests/test_calculation.py: 7 warnings .pybuild/test_python3.12/tests/test_task.py: 6 warnings /usr/lib/python3/dist-packages/pymatgen/io/vasp/outputs.py:1220: UserWarning: No POTCAR file with matching TITEL fields was found in warnings.warn("No POTCAR file with matching TITEL fields was found in\n" + "\n ".join(potcar_paths)) .pybuild/test_python3.12/tests/test_chemenv.py::test_chemenv[structure7] .pybuild/test_python3.12/tests/test_chemenv.py::test_chemenv[structure11] .pybuild/test_python3.12/tests/test_elasticity.py::test_generate_derived_fitting_data .pybuild/test_python3.12/tests/test_elasticity.py::test_from_deformations_and_stresses .pybuild/test_python3.12/tests/test_elasticity.py::test_from_deformations_and_stresses .pybuild/test_python3.12/tests/test_elasticity.py::test_from_deformations_and_stresses .pybuild/test_python3.12/tests/test_oxidation_states.py::test_oxidation_state[structure7] .pybuild/test_python3.12/tests/test_oxidation_states.py::test_oxidation_state[structure11] /usr/lib/python3/dist-packages/spglib/spglib.py:640: DeprecationWarning: Use get_magnetic_symmetry() for cell with magnetic moments. warnings.warn( .pybuild/test_python3.12/tests/test_electrodes.py::test_InsertionDocs /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/electrode.py:303: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). d["last_updated"] = datetime.utcnow() .pybuild/test_python3.12/tests/test_electrodes.py: 12 warnings /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/electrode.py:539: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). "last_updated": datetime.utcnow(), .pybuild/test_python3.12/tests/test_provenance.py::test_from_snls .pybuild/test_python3.12/tests/test_provenance.py::test_from_snls .pybuild/test_python3.12/tests/test_provenance.py::test_from_snls /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/test_python3.12/tests/test_provenance.py:24: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). created_at=datetime.utcnow(), .pybuild/test_python3.12/tests/test_provenance.py::test_from_snls /usr/lib/python3/dist-packages/pydantic/main.py:1114: PydanticDeprecatedSince20: The `dict` method is deprecated; use `model_dump` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.9/migration/ warnings.warn('The `dict` method is deprecated; use `model_dump` instead.', category=PydanticDeprecatedSince20) .pybuild/test_python3.12/tests/test_thermo.py::test_from_entries .pybuild/test_python3.12/tests/test_thermo.py::test_from_entries .pybuild/test_python3.12/tests/test_thermo.py::test_from_entries .pybuild/test_python3.12/tests/test_thermo.py::test_from_entries .pybuild/test_python3.12/tests/test_thermo.py::test_from_entries /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/thermo.py:251: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). last_updated=d.get("last_updated", datetime.utcnow()), .pybuild/test_python3.12/tests/vasp/test_vasp.py::test_task_type /build/reproducible-path/python-emmet-core-0.76.2/.pybuild/cpython3_3.12_emmet-core/build/emmet/core/vasp/calc_types/utils.py:75: DeprecationWarning: NotImplemented should not be used in a boolean context num_kpt_labels = len(list(filter(None.__ne__, kpt_labels))) .pybuild/test_python3.12/tests/vasp/test_vasp.py::test_ldau_validation /usr/lib/python3/dist-packages/pymatgen/io/vasp/sets.py:580: UserWarning: Co without an oxidation state is initialized as low spin by default in Pymatgen. If this default behavior is not desired, please set the spin on the magmom on the site directly to ensure correct initialization. warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========= 154 passed, 28 skipped, 7 deselected, 364 warnings in 48.92s ========= make[1]: Leaving directory '/build/reproducible-path/python-emmet-core-0.76.2' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-emmet-core/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-emmet-core' in '../python3-emmet-core_0.76.2-1_all.deb'. dpkg-genbuildinfo --build=binary -O../python-emmet-core_0.76.2-1_amd64.buildinfo dpkg-genchanges --build=binary -O../python-emmet-core_0.76.2-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from python-emmet-core-0.76.2/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2967159/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2967159 and its subdirectories I: Current time: Wed Dec 17 01:44:41 +14 2025 I: pbuilder-time-stamp: 1765885481