I: pbuilder: network access will be disabled during build I: Current time: Wed May 8 04:39:14 +14 2024 I: pbuilder-time-stamp: 1715092754 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [meep-openmpi_1.25.0-2.dsc] I: copying [./meep-openmpi_1.25.0.orig.tar.gz] I: copying [./meep-openmpi_1.25.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Wed May 10 17:37:28 2023 gpgv: using RSA key 6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./meep-openmpi_1.25.0-2.dsc: no acceptable signature found dpkg-source: info: extracting meep-openmpi in meep-openmpi-1.25.0 dpkg-source: info: unpacking meep-openmpi_1.25.0.orig.tar.gz dpkg-source: info: unpacking meep-openmpi_1.25.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying i386-fix.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/D01_modify_environment starting debug: Running on infom01-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 May 7 14:39 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=5329f2559a784372b017cc0bb2ffe7a3 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1873168 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LAB80wgI/pbuilderrc_p7Gt --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LAB80wgI/b2 --logfile b2/build.log meep-openmpi_1.25.0-2.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.1.0-21-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 5 11:23 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: gfortran, debhelper-compat (= 13), quilt, libctl-dev (>= 4.5.0-8), pkg-config, libharminv-dev (>= 1.4.1), zlib1g-dev, libfftw3-dev, libhdf5-openmpi-dev, libgsl-dev, liblapack-dev, libopenmpi-dev, libblas-dev, chrpath, swig, python3-dev, python3-numpy, python3-h5py, openmpi-bin, libgdsii-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19698 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on quilt; however: Package quilt is not installed. pbuilder-satisfydepends-dummy depends on libctl-dev (>= 4.5.0-8); however: Package libctl-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libharminv-dev (>= 1.4.1); however: Package libharminv-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-openmpi-dev; however: Package libhdf5-openmpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libopenmpi-dev; however: Package libopenmpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on openmpi-bin; however: Package openmpi-bin is not installed. pbuilder-satisfydepends-dummy depends on libgdsii-dev; however: Package libgdsii-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} diffstat{a} dwz{a} ed{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} guile-3.0{a} guile-3.0-dev{a} guile-3.0-libs{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbsd0{a} libcbor0.10{a} libcom-err2{a} libctl-dev{a} libctl7t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgc-dev{a} libgc1{a} libgdsii-dev{a} libgdsii0{a} libgfortran-13-dev{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgsl-dev{a} libgsl27{a} libgslcblas0{a} libgssapi-krb5-2{a} libharminv-dev{a} libharminv3{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhdf5-openmpi-103-1t64{a} libhdf5-openmpi-cpp-103-1t64{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102t64{a} libhdf5-openmpi-hl-100t64{a} libhdf5-openmpi-hl-cpp-100t64{a} libhdf5-openmpi-hl-fortran-100t64{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libpciaccess0{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} librdmacm1t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libucx0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-dev{a} python3-distutils{a} python3-h5py{a} python3-h5py-serial{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} quilt{a} readline-common{a} sensible-utils{a} swig{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales less libarchive-cpio-perl libcoarrays-openmpi-dev libctl-doc libgpm2 libldap-common libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget xauth 0 packages upgraded, 191 newly installed, 0 to remove and 0 not upgraded. Need to get 161 MB of archives. After unpacking 724 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024a-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40-8 [92.8 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20230828-1+b1 [93.5 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libcbor0.10 amd64 0.10.2-1.1 [27.8 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 libfido2-1 amd64 1.14.0-1+b2 [77.7 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1~rc2-1 [22.6 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 32 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 openssh-client amd64 1:9.7p1-4 [965 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 48 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 diffstat amd64 1.66-1 [34.0 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 ed amd64 1.20.2-2 [60.8 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14-20240330-1 [836 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 libgfortran-13-dev amd64 13.2.0-24 [847 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-24 [10.7 MB] Get: 61 http://deb.debian.org/debian trixie/main amd64 gfortran-13 amd64 13.2.0-24 [12.2 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 gfortran-x86-64-linux-gnu amd64 4:13.2.0-7 [1280 B] Get: 63 http://deb.debian.org/debian trixie/main amd64 gfortran amd64 4:13.2.0-7 [1440 B] Get: 64 http://deb.debian.org/debian trixie/main amd64 libgc1 amd64 1:8.2.6-1 [244 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 guile-3.0-libs amd64 3.0.9-1+b2 [6631 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 guile-3.0 amd64 3.0.9-1+b2 [21.0 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 libncurses6 amd64 6.4+20240414-1 [104 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 libncurses-dev amd64 6.4+20240414-1 [349 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 libreadline-dev amd64 8.2-4 [152 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 libltdl7 amd64 2.4.7-7+b1 [393 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 libltdl-dev amd64 2.4.7-7+b1 [164 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b1 [329 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b1 [640 kB] Get: 74 http://deb.debian.org/debian trixie/main amd64 libgc-dev amd64 1:8.2.6-1 [410 kB] Get: 75 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-1+b2 [36.4 kB] Get: 76 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-1+b2 [29.7 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-1+b2 [26.2 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 guile-3.0-dev amd64 3.0.9-1+b2 [149 kB] Get: 79 http://deb.debian.org/debian trixie/main amd64 libnl-3-200 amd64 3.7.0-0.3 [59.0 kB] Get: 80 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-200 amd64 3.7.0-0.3 [181 kB] Get: 81 http://deb.debian.org/debian trixie/main amd64 libibverbs1 amd64 50.0-2+b1 [61.7 kB] Get: 82 http://deb.debian.org/debian trixie/main amd64 ibverbs-providers amd64 50.0-2+b1 [342 kB] Get: 83 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 85 http://deb.debian.org/debian trixie/main amd64 libaec-dev amd64 1.1.3-1 [21.0 kB] Get: 86 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 87 http://deb.debian.org/debian trixie/main amd64 libllvm17t64 amd64 1:17.0.6-11 [23.7 MB] Get: 88 http://deb.debian.org/debian trixie/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b1 [13.0 MB] Get: 89 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get: 90 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get: 91 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get: 92 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get: 93 http://deb.debian.org/debian trixie/main amd64 libhsakmt1 amd64 5.7.0-1 [60.7 kB] Get: 94 http://deb.debian.org/debian trixie/main amd64 libhsa-runtime64-1 amd64 5.7.1-2 [504 kB] Get: 95 http://deb.debian.org/debian trixie/main amd64 libamdhip64-5 amd64 5.7.1-3 [8760 kB] Get: 96 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 97 http://deb.debian.org/debian trixie/main amd64 libblas-dev amd64 3.12.0-3 [159 kB] Get: 98 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 99 http://deb.debian.org/debian trixie/main amd64 libctl7t64 amd64 4.5.1-2.1 [113 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 libctl-dev amd64 4.5.1-2.1 [106 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 102 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 103 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 104 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 105 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 106 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 107 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 108 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.7.1-3 [441 kB] Get: 109 http://deb.debian.org/debian trixie/main amd64 libcurl4-openssl-dev amd64 8.7.1-3 [547 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [181 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [132 kB] Get: 112 http://deb.debian.org/debian trixie/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [107 kB] Get: 113 http://deb.debian.org/debian trixie/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [54.1 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [61.1 kB] Get: 115 http://deb.debian.org/debian trixie/main amd64 libevent-dev amd64 2.1.12-stable-8.1+b3 [305 kB] Get: 116 http://deb.debian.org/debian trixie/main amd64 libexpat1-dev amd64 2.6.2-1 [155 kB] Get: 117 http://deb.debian.org/debian trixie/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 118 http://deb.debian.org/debian trixie/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get: 119 http://deb.debian.org/debian trixie/main amd64 librdmacm1t64 amd64 50.0-2+b1 [70.2 kB] Get: 120 http://deb.debian.org/debian trixie/main amd64 libfabric1 amd64 1.17.0-3+b1 [628 kB] Get: 121 http://deb.debian.org/debian trixie/main amd64 libfftw3-double3 amd64 3.3.10-1+b2 [779 kB] Get: 122 http://deb.debian.org/debian trixie/main amd64 libfftw3-long3 amd64 3.3.10-1+b2 [344 kB] Get: 123 http://deb.debian.org/debian trixie/main amd64 libfftw3-quad3 amd64 3.3.10-1+b2 [608 kB] Get: 124 http://deb.debian.org/debian trixie/main amd64 libfftw3-single3 amd64 3.3.10-1+b2 [806 kB] Get: 125 http://deb.debian.org/debian trixie/main amd64 libfftw3-bin amd64 3.3.10-1+b2 [52.3 kB] Get: 126 http://deb.debian.org/debian trixie/main amd64 libfftw3-dev amd64 3.3.10-1+b2 [2125 kB] Get: 127 http://deb.debian.org/debian trixie/main amd64 libgdsii0 amd64 0.2+ds.1-1+b1 [31.7 kB] Get: 128 http://deb.debian.org/debian trixie/main amd64 libgdsii-dev amd64 0.2+ds.1-1+b1 [35.8 kB] Get: 129 http://deb.debian.org/debian trixie/main amd64 libgslcblas0 amd64 2.7.1+dfsg-6+b1 [107 kB] Get: 130 http://deb.debian.org/debian trixie/main amd64 libgsl27 amd64 2.7.1+dfsg-6+b1 [934 kB] Get: 131 http://deb.debian.org/debian trixie/main amd64 libgsl-dev amd64 2.7.1+dfsg-6+b1 [1146 kB] Get: 132 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 133 http://deb.debian.org/debian trixie/main amd64 libharminv3 amd64 1.4.2-1 [18.0 kB] Get: 134 http://deb.debian.org/debian trixie/main amd64 libharminv-dev amd64 1.4.2-1 [15.8 kB] Get: 135 http://deb.debian.org/debian trixie/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.3 [1241 kB] Get: 136 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-3.3 [63.3 kB] Get: 137 http://deb.debian.org/debian trixie/main amd64 libhwloc15 amd64 2.10.0-1+b1 [161 kB] Get: 138 http://deb.debian.org/debian trixie/main amd64 libmunge2 amd64 0.5.15-4 [19.8 kB] Get: 139 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get: 140 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get: 141 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get: 142 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 143 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get: 144 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get: 145 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 146 http://deb.debian.org/debian trixie/main amd64 libxnvctrl0 amd64 535.171.04-1 [13.8 kB] Get: 147 http://deb.debian.org/debian trixie/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get: 148 http://deb.debian.org/debian trixie/main amd64 libhwloc-plugins amd64 2.10.0-1+b1 [18.0 kB] Get: 149 http://deb.debian.org/debian trixie/main amd64 libpmix2t64 amd64 5.0.2-3 [652 kB] Get: 150 http://deb.debian.org/debian trixie/main amd64 libucx0 amd64 1.16.0+ds-5 [1109 kB] Get: 151 http://deb.debian.org/debian trixie/main amd64 libopenmpi3t64 amd64 4.1.6-13.2 [2428 kB] Get: 152 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-103-1t64 amd64 1.10.10+repack-3.3 [1301 kB] Get: 153 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-cpp-103-1t64 amd64 1.10.10+repack-3.3 [131 kB] Get: 154 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-fortran-102t64 amd64 1.10.10+repack-3.3 [90.1 kB] Get: 155 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-hl-100t64 amd64 1.10.10+repack-3.3 [63.5 kB] Get: 156 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-hl-fortran-100t64 amd64 1.10.10+repack-3.3 [40.6 kB] Get: 157 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-hl-cpp-100t64 amd64 1.10.10+repack-3.3 [21.3 kB] Get: 158 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3.1 [918 kB] Get: 159 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get: 160 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3 [290 kB] Get: 161 http://deb.debian.org/debian trixie/main amd64 libjpeg-dev amd64 1:2.1.5-3 [71.9 kB] Get: 162 http://deb.debian.org/debian trixie/main amd64 libssl-dev amd64 3.2.1-3 [2699 kB] Get: 163 http://deb.debian.org/debian trixie/main amd64 openmpi-common all 4.1.6-13.2 [169 kB] Get: 164 http://deb.debian.org/debian trixie/main amd64 libnl-3-dev amd64 3.7.0-0.3 [99.4 kB] Get: 165 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-dev amd64 3.7.0-0.3 [199 kB] Get: 166 http://deb.debian.org/debian trixie/main amd64 libibverbs-dev amd64 50.0-2+b1 [642 kB] Get: 167 http://deb.debian.org/debian trixie/main amd64 libnuma-dev amd64 2.0.18-1 [36.2 kB] Get: 168 http://deb.debian.org/debian trixie/main amd64 libhwloc-dev amd64 2.10.0-1+b1 [250 kB] Get: 169 http://deb.debian.org/debian trixie/main amd64 libpmix-dev amd64 5.0.2-3 [3940 kB] Get: 170 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 171 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 172 http://deb.debian.org/debian trixie/main amd64 openmpi-bin amd64 4.1.6-13.2 [226 kB] Get: 173 http://deb.debian.org/debian trixie/main amd64 libopenmpi-dev amd64 4.1.6-13.2 [972 kB] Get: 174 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-dev amd64 1.10.10+repack-3.3 [2705 kB] Get: 175 http://deb.debian.org/debian trixie/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 176 http://deb.debian.org/debian trixie/main amd64 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 177 http://deb.debian.org/debian trixie/main amd64 liblapack-dev amd64 3.12.0-3 [4880 kB] Get: 178 http://deb.debian.org/debian trixie/main amd64 liblzf1 amd64 3.6-4+b1 [10.4 kB] Get: 179 http://deb.debian.org/debian trixie/main amd64 libpython3.11t64 amd64 3.11.9-1 [1960 kB] Get: 180 http://deb.debian.org/debian trixie/main amd64 libpython3.11-dev amd64 3.11.9-1 [4513 kB] Get: 181 http://deb.debian.org/debian trixie/main amd64 libpython3-dev amd64 3.11.8-1 [9560 B] Get: 182 http://deb.debian.org/debian trixie/main amd64 python3.11-dev amd64 3.11.9-1 [501 kB] Get: 183 http://deb.debian.org/debian trixie/main amd64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 184 http://deb.debian.org/debian trixie/main amd64 python3-distutils all 3.12.3-1 [131 kB] Get: 185 http://deb.debian.org/debian trixie/main amd64 python3-dev amd64 3.11.8-1 [26.1 kB] Get: 186 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 187 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-8 [5466 kB] Get: 188 http://deb.debian.org/debian trixie/main amd64 python3-h5py-serial amd64 3.10.0-1+b3 [1400 kB] Get: 189 http://deb.debian.org/debian trixie/main amd64 python3-h5py all 3.10.0-1 [14.4 kB] Get: 190 http://deb.debian.org/debian trixie/main amd64 quilt all 0.68-1 [437 kB] Get: 191 http://deb.debian.org/debian trixie/main amd64 swig amd64 4.2.1-1 [1437 kB] Fetched 161 MB in 1s (113 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19698 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20014 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-3_all.deb ... Unpacking tzdata (2024a-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../5-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21006 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_amd64.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package sensible-utils. 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Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libncurses-dev:amd64 (6.4+20240414-1) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libgsl-dev (2.7.1+dfsg-6+b1) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-2+b1) ... Setting up libtool (2.4.7-7) ... Setting up libfftw3-bin (3.3.10-1+b2) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-8.1+b3) ... Setting up libgdsii-dev:amd64 (0.2+ds.1-1+b1) ... Setting up libedit2:amd64 (3.1-20230828-1+b1) ... Setting up libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-8.1+b3) ... Setting up libaec-dev:amd64 (1.1.3-1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3) ... Setting up quilt (0.68-1) ... Setting up gfortran-13-x86-64-linux-gnu (13.2.0-24) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up pkgconf:amd64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.18-1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-7+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:amd64 (1:17.0.6-11) ... Setting up gfortran-13 (13.2.0-24) ... Setting up liblapack-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up libharminv3 (1.4.2-1) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-8.1+b3) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libdrm2:amd64 (2.4.120-2) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3) ... Setting up groff-base (1.23.0-4) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libhwloc-dev:amd64 (2.10.0-1+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Setting up libharminv-dev (1.4.2-1) ... Setting up libfftw3-dev:amd64 (3.3.10-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libibverbs1:amd64 (50.0-2+b1) ... Setting up libcurl4t64:amd64 (8.7.1-3) ... Setting up ibverbs-providers:amd64 (50.0-2+b1) ... Setting up guile-3.0-libs:amd64 (3.0.9-1+b2) ... Setting up openssh-client (1:9.7p1-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up libpython3.11t64:amd64 (3.11.9-1) ... Setting up libctl7t64:amd64 (4.5.1-2.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libreadline-dev:amd64 (8.2-4) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:13.2.0-7) ... Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:amd64 (535.171.04-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3) ... Setting up libcurl4-openssl-dev:amd64 (8.7.1-3) ... Setting up libpython3.11-dev:amd64 (3.11.9-1) ... Setting up libevent-dev (2.1.12-stable-8.1+b3) ... Setting up librdmacm1t64:amd64 (50.0-2+b1) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up guile-3.0 (3.0.9-1+b2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/guile/3.0/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up libhsakmt1:amd64 (5.7.0-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libfabric1:amd64 (1.17.0-3+b1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:amd64 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libibverbs-dev:amd64 (50.0-2+b1) ... Setting up libhwloc-plugins:amd64 (2.10.0-1+b1) ... Setting up libpmix2t64:amd64 (5.0.2-3) ... Setting up libhsa-runtime64-1 (5.7.1-2) ... Setting up guile-3.0-dev (3.0.9-1+b2) ... update-alternatives: using /usr/bin/guile-config-3.0 to provide /usr/bin/guile-config (guile-config) in auto mode update-alternatives: using /usr/share/aclocal/guile-3.0.m4 to provide /usr/share/aclocal/guile.m4 (guile-autoconf-macros) in auto mode Setting up python3-lib2to3 (3.12.3-1) ... Setting up libpmix-dev:amd64 (5.0.2-3) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... Setting up libctl-dev:amd64 (4.5.1-2.1) ... Setting up libamdhip64-5 (5.7.1-3) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-numpy (1:1.26.4+ds-8) ... Setting up libucx0:amd64 (1.16.0+ds-5) ... Setting up python3-h5py-serial (3.10.0-1+b3) ... Setting up python3-h5py (3.10.0-1) ... Setting up libopenmpi3t64:amd64 (4.1.6-13.2) ... Setting up openmpi-bin (4.1.6-13.2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-openmpi-fortran-102t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-openmpi-cpp-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libopenmpi-dev:amd64 (4.1.6-13.2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-hl-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-openmpi-hl-fortran-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-openmpi-hl-cpp-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-openmpi-dev (1.10.10+repack-3.3) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Processing triggers for libc-bin (2.38-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.33-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/meep-openmpi-1.25.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../meep-openmpi_1.25.0-2_source.changes dpkg-buildpackage: info: source package meep-openmpi dpkg-buildpackage: info: source version 1.25.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Thorsten Alteholz dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' # we do not need this anymore rm -f tests/latest_output dh_clean make[1]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' debian/rules build dh build --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:74: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:74: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... m4/ax_mpi.m4:69: AX_MPI is expanded from... configure.ac:74: the top level configure.ac:64: installing './compile' configure.ac:109: installing './config.guess' configure.ac:109: installing './config.sub' configure.ac:12: installing './install-sh' configure.ac:12: installing './missing' libpympb/Makefile.am: installing './depcomp' python/Makefile.am:234: installing './py-compile' parallel-tests: installing './test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' F77=gfortran dh_auto_configure -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes --enable-maintainer-mode ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --with-mpi=yes --enable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-gcc... none checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking dependency style of x86_64-linux-gnu-g++... none checking for mpic++... mpic++ checking for MPI_Init... yes checking for mpi.h... yes checking for extra flag needed to combine stdio.h and mpi.h... none checking whether mpic++ supports C++11 features by default... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for C++ compiler vendor... gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-file... no checking for file... file checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpic++ -E checking for ld used by mpic++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpic++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking for x86_64-linux-gnu-g77... gfortran checking whether the compiler supports GNU Fortran 77... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl_intel_lp64... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for pkg-config... /usr/bin/pkg-config checking for harminv >= 1.1... yes checking HARMINV_CFLAGS... checking HARMINV_LIBS... -lharminv checking for mpb.h... no checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking for H5Pcreate... yes checking for hdf5.h... yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for mpirun... mpirun checking for guile-config... guile-config checking if linking to guile works... yes checking for libguile.h... yes checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking for ctl.h... yes checking whether libctl version is at least 4.2.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking for libGDSII.h... yes checking for libGDSIIExists in -lGDSII... yes checking for libGDSII::GetLayers... no checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes checking whether to catch and ignore SIGFPE signals... no checking for sys/time.h... yes checking for immintrin.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for jn... yes checking for C/C++ restrict keyword... no checking for swig... swig checking for python... no checking for python2... no checking for python3... /usr/bin/python3 checking for python version... 3.11 checking for python platform... linux checking for GNU default python prefix... ${prefix} checking for GNU default python exec_prefix... ${exec_prefix} checking for python script directory (pythondir)... ${PYTHON_PREFIX}/lib/python3.11/site-packages checking for python extension module directory (pyexecdir)... ${PYTHON_EXEC_PREFIX}/lib/python3.11/site-packages checking for Python include directory... /usr/include/python3.11 checking for Python.h... yes checking for Numpy include directory... /usr/lib/python3/dist-packages/numpy/core/include checking for numpy/arrayobject.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating scheme/Makefile config.status: creating scheme/meep.scm config.status: creating libpympb/Makefile config.status: creating python/Makefile config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating src/support/Makefile config.status: creating tests/Makefile config.status: creating src/meep/meep-config.h config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' make all-recursive make[2]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' Making all in src make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make sphere_quad (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o sphere-quad.o sphere-quad.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../src/sphere_quad) > sphere-quad.h make all-recursive make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' Making all in support make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o mt19937ar.lo mt19937ar.c libtool: compile: x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c mt19937ar.c -fPIC -DPIC -o .libs/mt19937ar.o libtool: compile: x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c mt19937ar.c -fPIC -DPIC -o mt19937ar.o >/dev/null 2>&1 /bin/sh ../../libtool --tag=CC --mode=link x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libsupport.la mt19937ar.lo -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-ar cr .libs/libsupport.a .libs/mt19937ar.o libtool: link: x86_64-linux-gnu-ranlib .libs/libsupport.a libtool: link: ( cd ".libs" && rm -f "libsupport.la" && ln -s "../libsupport.la" "libsupport.la" ) make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o array_slice.lo array_slice.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o anisotropic_averaging.lo anisotropic_averaging.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o bands.lo bands.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o boundaries.lo boundaries.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o bicgstab.lo bicgstab.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat 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fields.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o fields_dump.lo fields_dump.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c array_slice.cpp -fPIC -DPIC -o .libs/array_slice.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c boundaries.cpp -fPIC -DPIC -o .libs/boundaries.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c casimir.cpp -fPIC -DPIC -o .libs/casimir.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c bands.cpp -fPIC -DPIC -o .libs/bands.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c fields.cpp -fPIC -DPIC -o .libs/fields.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c cw_fields.cpp -fPIC -DPIC -o .libs/cw_fields.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c dft.cpp -fPIC -DPIC -o .libs/dft.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c bicgstab.cpp -fPIC -DPIC -o .libs/bicgstab.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o .libs/dft_ldos.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c fields_dump.cpp -fPIC -DPIC -o .libs/fields_dump.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o .libs/anisotropic_averaging.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o .libs/energy_and_flux.o dft.cpp:269: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 269 | PLOOP_OVER_IVECS(fc->gv, is, ie, idx) { | libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c bands.cpp -fPIC -DPIC -o bands.o >/dev/null 2>&1 boundaries.cpp: In member function 'meep::ivec meep::fields::ilattice_vector(meep::direction) const': boundaries.cpp:120:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 120 | switch (d) { | ^~~~~~ boundaries.cpp:128:5: note: here 128 | case D3: | ^~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-DPIC -o cw_fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c fields.cpp -fPIC -DPIC -o fields.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c array_slice.cpp -fPIC -DPIC -o array_slice.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 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loop_in_chunks.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c loop_in_chunks.cpp -fPIC -DPIC -o .libs/loop_in_chunks.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o h5fields.lo h5fields.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 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-DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o initialize.lo initialize.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c initialize.cpp -fPIC -DPIC -o .libs/initialize.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o integrate.lo integrate.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c integrate.cpp -fPIC -DPIC -o .libs/integrate.o In file included from /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/lib/x86_64-linux-gnu/openmpi/include/mpi.h:2911, from fix_boundary_sources.cpp:11: /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o anisotropic_averaging.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c dft.cpp -fPIC -DPIC -o dft.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c boundaries.cpp -fPIC -DPIC -o boundaries.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c initialize.cpp -fPIC -DPIC -o initialize.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c integrate.cpp -fPIC -DPIC -o integrate.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o material_data.lo material_data.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o monitor.lo monitor.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c material_data.cpp -fPIC -DPIC -o .libs/material_data.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c monitor.cpp -fPIC -DPIC -o .libs/monitor.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c fix_boundary_sources.cpp -fPIC -DPIC -o fix_boundary_sources.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c integrate2.cpp -fPIC -DPIC -o integrate2.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o mympi.lo mympi.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c mympi.cpp -fPIC -DPIC -o .libs/mympi.o monitor.cpp: In member function 'std::complex meep::structure_chunk::get_chi1inv_at_pt(meep::component, meep::direction, int, double) const': monitor.cpp:327:19: warning: 'comp_list' may be used uninitialized [-Wmaybe-uninitialized] 327 | component cc = comp_list[com_it]; | ^~ monitor.cpp:274:15: note: 'comp_list' declared here 274 | component comp_list[3]; | ^~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c material_data.cpp -fPIC -DPIC -o material_data.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o multilevel-atom.lo multilevel-atom.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o near2far.lo near2far.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o output_directory.lo output_directory.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o .libs/multilevel-atom.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c near2far.cpp -fPIC -DPIC -o .libs/near2far.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c output_directory.cpp -fPIC -DPIC -o .libs/output_directory.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o random.lo random.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o sources.lo sources.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c sources.cpp -fPIC -DPIC -o .libs/sources.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c monitor.cpp -fPIC -DPIC -o monitor.o >/dev/null 2>&1 In file included from /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/lib/x86_64-linux-gnu/openmpi/include/mpi.h:2911, from mympi.cpp:32: /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o step.lo step.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step.cpp -fPIC -DPIC -o .libs/step.o step.cpp:144: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 144 | CHUNK_OPENMP | In file included from sources.cpp:27: meep_internals.hpp: In constructor 'meep::src_vol::src_vol(meep::component, meep::src_time*, std::vector&&, std::vector >&&, bool)': meep_internals.hpp:82:38: warning: 'meep::src_vol::amp' will be initialized after [-Wreorder] 82 | std::vector > amp; // amplitudes | ^~~ meep_internals.hpp:78:8: warning: 'bool meep::src_vol::needs_boundary_fix' [-Wreorder] 78 | bool needs_boundary_fix; // whether fix_boundary_sources needs calling | ^~~~~~~~~~~~~~~~~~ sources.cpp:168:1: warning: when initialized here [-Wreorder] 168 | src_vol::src_vol(component cc, src_time *st, std::vector &&ind, | ^~~~~~~ output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:115:35: warning: '-out' directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 115 | snprintf(outdirname, buflen, "%s-out", basename); | ^~~~ In file included from /usr/include/stdio.h:964, from output_directory.cpp:18: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'const char* meep::make_output_directory(const char*, const char*)' at output_directory.cpp:115:11: /usr/include/x86_64-linux-gnu/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 5 and 304 bytes into a destination of size 300 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:124:36: warning: '%s' directive output may be truncated writing up to 299 bytes into a region of size between 0 and 299 [-Wformat-truncation=] 124 | snprintf(outsrcname, buflen, "%s/%s", outdirname, sourcename); | ^~ ~~~~~~~~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'const char* meep::make_output_directory(const char*, const char*)' at output_directory.cpp:124:11: /usr/include/x86_64-linux-gnu/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 2 and 600 bytes into a destination of size 300 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:120:39: warning: '-out-' directive output may be truncated writing 5 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 120 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~ output_directory.cpp:120:36: note: directive argument in the range [0, 2147483647] 120 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~~~~~~~ In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'const char* meep::make_output_directory(const char*, const char*)' at output_directory.cpp:120:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 7 and 315 bytes into a destination of size 300 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o step_db.lo step_db.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c output_directory.cpp -fPIC -DPIC -o output_directory.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step_db.cpp -fPIC -DPIC -o .libs/step_db.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c random.cpp -fPIC -DPIC -o random.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o stress.lo stress.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c stress.cpp -fPIC -DPIC -o .libs/stress.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o structure.lo structure.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c structure.cpp -fPIC -DPIC -o .libs/structure.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o multilevel-atom.o >/dev/null 2>&1 mympi.cpp: In function 'void meep::abort(const char*, ...)': mympi.cpp:242:12: warning: ignoring return value of 'int vasprintf(char**, const char*, __va_list_tag*)' declared with attribute 'warn_unused_result' [-Wunused-result] 242 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ mympi.cpp: In function 'void meep::_do_master_printf(FILE*, meep_printf_callback_func, const char*, __va_list_tag*)': mympi.cpp:686:16: warning: ignoring return value of 'int vasprintf(char**, const char*, __va_list_tag*)' declared with attribute 'warn_unused_result' [-Wunused-result] 686 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o structure_dump.lo structure_dump.cpp /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o susceptibility.lo susceptibility.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c structure_dump.cpp -fPIC -DPIC -o .libs/structure_dump.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c susceptibility.cpp -fPIC -DPIC -o .libs/susceptibility.o susceptibility.cpp:228: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 228 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | susceptibility.cpp:242: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 242 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | susceptibility.cpp:252: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 252 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o time.lo time.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c time.cpp -fPIC -DPIC -o .libs/time.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o update_eh.lo update_eh.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c update_eh.cpp -fPIC -DPIC -o .libs/update_eh.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c near2far.cpp -fPIC -DPIC -o near2far.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step.cpp -fPIC -DPIC -o step.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o mpb.lo mpb.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c mympi.cpp -fPIC -DPIC -o mympi.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step_db.cpp -fPIC -DPIC -o step_db.o >/dev/null 2>&1 structure_dump.cpp: In member function 'void meep::structure::dump(const char*, bool)': structure_dump.cpp:296:46: warning: '_' directive output may be truncated writing 1 byte into a region of size between 0 and 9 [-Wformat-truncation=] 296 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^ structure_dump.cpp:296:31: note: using the range [-2147483648, 2147483647] for directive argument 296 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:964, from structure_dump.cpp:22: In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void meep::structure::dump(const char*, bool)' at structure_dump.cpp:296:19: /usr/include/x86_64-linux-gnu/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 14 and 43 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c update_eh.cpp -fPIC -DPIC -o update_eh.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o update_pols.lo update_pols.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c susceptibility.cpp -fPIC -DPIC -o susceptibility.o >/dev/null 2>&1 structure_dump.cpp: In member function 'void meep::structure::load(const char*, bool)': structure_dump.cpp:748:44: warning: '%d' directive output may be truncated writing between 1 and 2 bytes into a region of size between 1 and 10 [-Wformat-truncation=] 748 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~ structure_dump.cpp:748:31: note: directive argument in the range [0, 19] 748 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ structure_dump.cpp:748:31: note: directive argument in the range [0, 4] In function 'int snprintf(char*, size_t, const char*, ...)', inlined from 'void meep::structure::load(const char*, bool)' at structure_dump.cpp:748:19: /usr/include/x86_64-linux-gnu/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 14 and 24 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o vec.lo vec.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c vec.cpp -fPIC -DPIC -o .libs/vec.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c structure_dump.cpp -fPIC -DPIC -o structure_dump.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o step_generic.lo step_generic.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step_generic.cpp -fPIC -DPIC -o .libs/step_generic.o step_generic.cpp:91: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 91 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:97: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 97 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:104: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 104 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:109: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 109 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] -= dtdx * (g1[i + s1] - g1[i]); } | step_generic.cpp:118: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 118 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:128: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 128 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:138: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 138 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:146: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 146 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:162: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 162 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:172: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 172 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:182: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 182 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:189: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 189 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:202: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 202 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:216: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 216 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:229: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 229 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:239: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 239 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:267: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 267 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:279: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 279 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:290: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 290 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:298: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 298 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:309: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 309 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:317: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 317 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:327: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 327 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i] * cndinv[i]; } | step_generic.cpp:330: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 330 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i]; } | step_generic.cpp:392: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 392 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:407: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 407 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:419: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 419 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:431: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 431 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:447: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 447 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:460: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 460 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:473: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 473 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:484: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 484 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:494: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 494 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:506: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 506 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:517: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 517 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:526: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 526 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:535: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 535 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:548: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 548 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:558: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 558 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:568: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 568 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:576: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 576 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:583: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 583 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] = g[i]; } | /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meepgeom.lo meepgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c meepgeom.cpp -fPIC -DPIC -o .libs/meepgeom.o libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 meepgeom.cpp:2959: warning: ignoring '#pragma unroll ' [-Wunknown-pragmas] 2959 | #pragma unroll | /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o .libs/GDSIIgeom.o /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o .libs/step_generic_stride1.o step_generic_stride1.cpp:93: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 93 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:93: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:99: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 99 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:99: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:106: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 106 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:106: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:111: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 111 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] -= dtdx * (g1[i + s1] - g1[i]); } | step_generic_stride1.cpp:111: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:120: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 120 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:120: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:130: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 130 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:130: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:140: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 140 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:140: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:148: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 148 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:148: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:164: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 164 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:164: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:174: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 174 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:174: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:184: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 184 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:184: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:191: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 191 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:191: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:204: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 204 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:204: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:218: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 218 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:218: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:231: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 231 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:231: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:241: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 241 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:241: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:269: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 269 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:269: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:281: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 281 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:281: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:292: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 292 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:292: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:300: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 300 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:300: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:311: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:319: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 319 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:319: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:329: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 329 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i] * cndinv[i]; } | step_generic_stride1.cpp:329: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:332: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 332 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i]; } | step_generic_stride1.cpp:332: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:394: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 394 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:394: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:409: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 409 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:409: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:421: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 421 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:421: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:433: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 433 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:433: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:449: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 449 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:449: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:462: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 462 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:462: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:475: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 475 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:475: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:486: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 486 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:486: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:496: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 496 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:496: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:508: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 508 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:508: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:519: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 519 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:519: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:528: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 528 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:528: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:537: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 537 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:537: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:550: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 550 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:550: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:560: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 560 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:560: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:570: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 570 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:570: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:578: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 578 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:578: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] step_generic_stride1.cpp:585: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 585 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] = g[i]; } | step_generic_stride1.cpp:585: warning: ignoring '#pragma omp simd' [-Wunknown-pragmas] meepgeom.cpp: In copy constructor 'meep_geom::geom_epsilon::geom_epsilon(const meep_geom::geom_epsilon&)': meepgeom.cpp:711:1: warning: base class 'class meep::material_function' should be explicitly initialized in the copy constructor [-Wextra] 711 | geom_epsilon::geom_epsilon(const geom_epsilon &geps1) { | ^~~~~~~~~~~~ meepgeom.cpp: In function 'std::complex meep_geom::get_material_gradient(const meep::vec&, meep::component, meep::component, std::complex, double, geom_epsilon*, meep::grid_volume&, double, double*, int)': meepgeom.cpp:2685:46: warning: unused variable 'dA_du' [-Wunused-variable] 2685 | std::complex row_1[3], row_2[3], dA_du[3]; | ^~~~~ meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient(double*, size_t, size_t, std::vector, std::vector, double*, double, meep::grid_volume&, meep::volume&, geom_epsilon*, double)': meepgeom.cpp:2838:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 2838 | for (int i = 0; i < ng * nf; i++) { | ~~^~~~~~~~~ meepgeom.cpp:2854:44: warning: format '%d' expects argument of type 'int', but argument 2 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] 2854 | meep::abort("Supplied frequencies %d don't match dft frequencies %d\n", nf, | ~^ ~~ | | | | int size_t {aka long unsigned int} | %ld meepgeom.cpp:2854:75: warning: format '%d' expects argument of type 'int', but argument 3 has type 'std::vector::size_type' {aka 'long unsigned int'} [-Wformat=] 2854 | meep::abort("Supplied frequencies %d don't match dft frequencies %d\n", nf, | ~^ | | | int | %ld 2855 | current_adjoint_chunk->omega.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | std::vector::size_type {aka long unsigned int} meepgeom.cpp:2861:44: warning: format '%d' expects argument of type 'int', but argument 2 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] 2861 | meep::abort("Supplied frequencies %d don't match dft frequencies %d\n", nf, | ~^ ~~ | | | | int size_t {aka long unsigned int} | %ld meepgeom.cpp:2861:75: warning: format '%d' expects argument of type 'int', but argument 3 has type 'std::vector::size_type' {aka 'long unsigned int'} [-Wformat=] 2861 | meep::abort("Supplied frequencies %d don't match dft frequencies %d\n", nf, | ~^ | | | int | %ld 2862 | current_forward_chunk->omega.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | std::vector::size_type {aka long unsigned int} meepgeom.cpp:2895:49: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 2895 | if ((num_f_chunks == 0) || (cur_chunk >= num_f_chunks)) continue; | ~~~~~~~~~~^~~~~~~~~~~~~~~ meepgeom.cpp:2962:35: warning: comparison of integer expressions of different signedness: 'ptrdiff_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 2962 | fwd1 = ((fwd1_idx >= fwd_chunk->N) || (fwd1_idx < 0)) | ~~~~~~~~~^~~~~~~~~~~~~~~ meepgeom.cpp:2966:35: warning: comparison of integer expressions of different signedness: 'ptrdiff_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 2966 | fwd2 = ((fwd2_idx >= fwd_chunk->N) || (fwd2_idx < 0)) | ~~~~~~~~~^~~~~~~~~~~~~~~ meepgeom.cpp:3000:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3000 | for (int ii = 0; ii < adjoint_dft_chunks[i].size(); ii++) { | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meepgeom.cpp:2832:88: warning: unused parameter 'where' [-Wunused-parameter] 2832 | double scalegrad, meep::grid_volume &gv, meep::volume &where, | ~~~~~~~~~~~~~~^~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c structure.cpp -fPIC -DPIC -o structure.o >/dev/null 2>&1 meepgeom.cpp: In function 'std::complex meep_geom::cond_cmp(meep::component, const meep::vec&, double, geom_epsilon*)': meepgeom.cpp:2617:1: warning: control reaches end of non-void function [-Wreturn-type] 2617 | } | ^ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 meepgeom.cpp: In function 'void meep_geom::material_grids_addgradient_point(double*, vector3, double, geom_epsilon*, meep::component, meep::component, std::complex, std::complex, double, meep::grid_volume&, double)': meepgeom.cpp:2824:28: warning: 'kind' may be used uninitialized [-Wmaybe-uninitialized] 2824 | add_interpolate_weights(p.x, p.y, p.z, vcur, sz.x, sz.y, sz.z, 1, scalegrad, ucur, kind, uval, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2825 | vector3_to_vec(p), geps, adjoint_c, forward_c, fwd, adj, freq, gv, tol); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meepgeom.cpp:2760:7: note: 'kind' was declared here 2760 | int kind; | ^~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c meepgeom.cpp -fPIC -DPIC -o meepgeom.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmeep.la -rpath /usr/lib/x86_64-linux-gnu array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo fields_dump.lo fix_boundary_sources.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo material_data.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo meepgeom.lo GDSIIgeom.lo step_generic_stride1.lo support/libsupport.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/13/crtbeginS.o .libs/array_slice.o .libs/anisotropic_averaging.o .libs/bands.o .libs/boundaries.o .libs/bicgstab.o .libs/casimir.o .libs/cw_fields.o .libs/dft.o .libs/dft_ldos.o .libs/energy_and_flux.o .libs/fields.o .libs/fields_dump.o .libs/fix_boundary_sources.o .libs/loop_in_chunks.o .libs/h5fields.o .libs/h5file.o .libs/initialize.o .libs/integrate.o .libs/integrate2.o .libs/material_data.o .libs/monitor.o .libs/mympi.o .libs/multilevel-atom.o .libs/near2far.o .libs/output_directory.o .libs/random.o .libs/sources.o .libs/step.o .libs/step_db.o .libs/stress.o .libs/structure.o .libs/structure_dump.o .libs/susceptibility.o .libs/time.o .libs/update_eh.o .libs/mpb.o .libs/update_pols.o .libs/vec.o .libs/step_generic.o .libs/meepgeom.o .libs/GDSIIgeom.o .libs/step_generic_stride1.o -Wl,--whole-archive support/.libs/libsupport.a -Wl,--no-whole-archive -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -lfftw3 -lgfortran -lquadmath -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/13/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,libmeep.so.30 -o .libs/libmeep.so.30.0.0 libtool: link: (cd ".libs" && rm -f "libmeep.so.30" && ln -s "libmeep.so.30.0.0" "libmeep.so.30") libtool: link: (cd ".libs" && rm -f "libmeep.so" && ln -s "libmeep.so.30.0.0" "libmeep.so") libtool: link: (cd .libs/libmeep.lax/libsupport.a && x86_64-linux-gnu-ar x "/build/reproducible-path/meep-openmpi-1.25.0/src/support/.libs/libsupport.a") libtool: link: x86_64-linux-gnu-ar cr .libs/libmeep.a array_slice.o anisotropic_averaging.o bands.o boundaries.o bicgstab.o casimir.o cw_fields.o dft.o dft_ldos.o energy_and_flux.o fields.o fields_dump.o fix_boundary_sources.o loop_in_chunks.o h5fields.o h5file.o initialize.o integrate.o integrate2.o material_data.o monitor.o mympi.o multilevel-atom.o near2far.o output_directory.o random.o sources.o step.o step_db.o stress.o structure.o structure_dump.o susceptibility.o time.o update_eh.o mpb.o update_pols.o vec.o step_generic.o meepgeom.o GDSIIgeom.o step_generic_stride1.o .libs/libmeep.lax/libsupport.a/mt19937ar.o libtool: link: x86_64-linux-gnu-ranlib .libs/libmeep.a libtool: link: rm -fr .libs/libmeep.lax libtool: link: ( cd ".libs" && rm -f "libmeep.la" && ln -s "../libmeep.la" "libmeep.la" ) make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' Making all in tests make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' Making all in scheme make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' gen-ctl-io --cxx --header -o ctl-io.h meep.scm /usr/share/libctl gen-ctl-io --cxx --swig -o ctl-io.i meep.scm /usr/share/libctl (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; perl -pe 's/^ *class +([A-Za-z_0-9:]*)( *| *:[^{]*){.*$/%rename(meep_\1) meep::\1;/' ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | grep "%rename" | sed '/meep_fields_chunk/d ; /meep_comms_manager/d ; /meep_comms_key_hash_fn/d ; /meep_timing_scope/d' | sort -u; echo; grep -hv typedef ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/(inline|const|extern|static) +//g' | perl -pe 's/^[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%rename(meep_\1) meep::\1;/' | grep "%rename" | sed '/choose_chunkdivision/d ; /meep_create_comms_manager/d' | sort -u; ) > meep_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; for f in ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp; do egrep "^enum" $f | perl -pe 's/enum +([A-Za-z_0-9:]+).*$/\1/g' | while read enum; do cat $f | tr -d '\n' | perl -pe 's/.*enum +'${enum}' *{([^}]*)}.*/\1/g' | perl -pe 's/= *[0-9]+//g' |tr -d ' \t' | tr ',' '\n' | perl -pe 's/^(.*)$/'"%rename(meep_${enum}_\1) meep::\1;/g"; echo; done; done;) > meep_enum_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; grep -h friend ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/^ *friend +[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%ignore \1;/' | grep "%ignore" | sort -u;) > meep_swig_bug_workaround.i (perl -pe 's/%rename\(([A-Za-z0-9_]*)\) *([A-Za-z0-9:_]*);$/(define \2 (\1))/' meep_enum_renames.i | perl -pe 's/[A-Za-z0-9:_]*:://g' | perl -pe 's/_/-/g' | perl -pe 's,//,;,'; echo "(define Centered Dielectric)") > meep-enums.scm ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; compiled /build/reproducible-path/meep-openmpi-1.25.0/debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl/base/include.scm.go swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; compiled /build/reproducible-path/meep-openmpi-1.25.0/debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl/base/include.scm.go cp -f /usr/share/libctl/base/main.c main.cpp cp -f /usr/share/libctl/utils/geom.c geom.cpp gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl patch -p0 meep_wrap.cxx < ./meep_wrap.patch patching file meep_wrap.cxx Hunk #1 succeeded at 813 (offset 62 lines). sed -i.bak '/(SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob))/ s/swig_collectable_tag, smob)/swig_collectable_tag, smob) || SCM_SMOB_PREDICATE((swig_collectable_tag \& ~0xff00), (smob))/' meep_wrap.cxx; make all-am make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meep-meep.o `test -f 'meep.cpp' || echo './'`meep.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meep-structure.o `test -f 'structure.cpp' || echo './'`structure.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meep-meep_wrap.o `test -f 'meep_wrap.cxx' || echo './'`meep_wrap.cxx mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meep-main.o `test -f 'main.cpp' || echo './'`main.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meep-geom.o `test -f 'geom.cpp' || echo './'`geom.cpp mpic++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.25.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -I/usr/include/guile/3.0 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp geom.cpp:22: warning: "_GNU_SOURCE" redefined 22 | #define _GNU_SOURCE | : note: this is the location of the previous definition In file included from ctl-io.h:7, from main.cpp:37: main.cpp: In function 'void main_entry(void*, int, char**)': main.cpp:194:31: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:202:44: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:205:45: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ctl-io.h:7, from ctl-io.cpp:7: ctl-io.cpp: In function 'void ctlio::export_external_functions()': ctl-io.cpp:2229:38: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2229 | gh_new_procedure("square-basis-aux", (SCM (*)()) square_basis_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2230:51: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2230 | gh_new_procedure("range-overlap-with-object-aux", (SCM (*)()) range_overlap_with_object_aux, 5, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2231:55: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2231 | gh_new_procedure("display-geometric-object-info-aux", (SCM (*)()) display_geometric_object_info_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2232:51: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2232 | gh_new_procedure("point-in-periodic-object?-aux", (SCM (*)()) point_in_periodic_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2233:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2233 | gh_new_procedure("normal-to-object-aux", (SCM (*)()) normal_to_object_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2234:42: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] 2234 | gh_new_procedure("point-in-object?-aux", (SCM (*)()) point_in_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ geom.cpp: In function 'vector3 normal_to_prism(ctlio::prism*, vector3)': geom.cpp:2357:11: warning: variable 'axisp' set but not used [-Wunused-but-set-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ In function 'bool get_front_object(const meep::volume&, geom_box_tree, vector3&, const ctlio::geometric_object**, vector3&, ctlio::material_type&, ctlio::material_type&)', inlined from 'virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)' at structure.cpp:618:40: structure.cpp:581:10: warning: 'mat1' may be used uninitialized [-Wmaybe-uninitialized] 581 | mat2 = mat1; | ~~~~~^~~~~~ structure.cpp: In member function 'virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)': structure.cpp:509:17: note: 'mat1' declared here 509 | material_type mat1, mat2; | ^~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_0(int, scm_unused_struct**)': meep_wrap.cxx:36013:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36013 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:36016:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36016 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_1(int, scm_unused_struct**)': meep_wrap.cxx:36078:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36078 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:36081:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36081 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_2(int, scm_unused_struct**)': meep_wrap.cxx:36142:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36142 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:36145:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 36145 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/.libs/libmeep.so -lctl -lguile-3.0 -lgc -lpthread -ldl -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' Making all in python make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' swig -Wextra -I../src -I../libpympb -I.. -outdir . -c++ -nofastunpack -python -o meep-python.cxx ./meep.i ../src/meep.hpp:1633: Warning 362: operator= ignored cp meep.py __init__.py echo "__version__ = '1.25.0'" >> __init__.py if [[ "4.2.1" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi make all-am make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' /bin/sh ../libtool --tag=CXX --mode=compile mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cxx' || echo './'`meep-python.cxx libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c meep-python.cxx -fPIC -DPIC -o .libs/_meep_la-meep-python.o meep-python.cxx: In function 'meep::structure* create_structure(vector3, std::vector, std::vector, std::vector, std::vector, std::vector, meep::grid_volume&, const meep::boundary_region&, const meep::symmetry&, int, double, bool, double, int, geometric_object_list, vector3, bool, meep_geom::material_type, meep_geom::absorber_list, meep_geom::material_type_list, bool, bool, meep::structure*, bool, const meep::binary_partition*)': meep-python.cxx:7486:62: warning: unused parameter 'alist' [-Wunused-parameter] 7486 | meep_geom::absorber_list alist, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ meep-python.cxx:7487:67: warning: unused parameter 'extra_materials' [-Wunused-parameter] 7487 | meep_geom::material_type_list extra_materials, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ meep-python.cxx:7489:42: warning: unused parameter 'set_materials' [-Wunused-parameter] 7489 | bool set_materials, | ~~~~~^~~~~~~~~~~~~ meep-python.cxx: In function 'meep_geom::geom_epsilon* _set_materials(meep::structure*, vector3, meep::grid_volume&, bool, double, int, geometric_object_list, vector3, bool, meep_geom::material_type, meep_geom::absorber_list, meep_geom::material_type_list, bool, bool, meep_geom::geom_epsilon*, bool, const meep::binary_partition*)': meep-python.cxx:7533:29: warning: unused parameter 'cell_size' [-Wunused-parameter] 7533 | vector3 cell_size, | ~~~~~~~~^~~~~~~~~ meep-python.cxx:7534:40: warning: unused parameter 'gv' [-Wunused-parameter] 7534 | meep::grid_volume &gv, | ~~~~~~~~~~~~~~~~~~~^~ meep-python.cxx:7547:26: warning: unused parameter 'output_chunk_costs' [-Wunused-parameter] 7547 | bool output_chunk_costs, | ~~~~~^~~~~~~~~~~~~~~~~~ meep-python.cxx:7548:51: warning: unused parameter 'my_bp' [-Wunused-parameter] 7548 | const meep::binary_partition *my_bp) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ meep-python.cxx: In function 'PyObject* _wrap_abort__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:25523:87: warning: unused parameter 'varargs' [-Wunused-parameter] 25523 | SWIGINTERN PyObject *_wrap_abort__varargs__(PyObject *self, PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_abort(PyObject*, PyObject*)': meep-python.cxx:25556:44: warning: unused parameter 'self' [-Wunused-parameter] 25556 | SWIGINTERN PyObject *_wrap_abort(PyObject *self, PyObject *args) { | ~~~~~~~~~~^~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:125649:95: warning: unused parameter 'varargs' [-Wunused-parameter] 125649 | SWIGINTERN PyObject *_wrap_master_printf__varargs__(PyObject *self, PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf(PyObject*, PyObject*)': meep-python.cxx:125682:52: warning: unused parameter 'self' [-Wunused-parameter] 125682 | SWIGINTERN PyObject *_wrap_master_printf(PyObject *self, PyObject *args) { | ~~~~~~~~~~^~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf_stderr__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:125696:102: warning: unused parameter 'varargs' [-Wunused-parameter] 125696 | SWIGINTERN PyObject *_wrap_master_printf_stderr__varargs__(PyObject *self, PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_printf_stderr(PyObject*, PyObject*)': meep-python.cxx:125729:59: warning: unused parameter 'self' [-Wunused-parameter] 125729 | SWIGINTERN PyObject *_wrap_master_printf_stderr(PyObject *self, PyObject *args) { | ~~~~~~~~~~^~~~ meep-python.cxx: In function 'PyObject* _wrap_debug_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:125743:94: warning: unused parameter 'varargs' [-Wunused-parameter] 125743 | SWIGINTERN PyObject *_wrap_debug_printf__varargs__(PyObject *self, PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_debug_printf(PyObject*, PyObject*)': meep-python.cxx:125776:51: warning: unused parameter 'self' [-Wunused-parameter] 125776 | SWIGINTERN PyObject *_wrap_debug_printf(PyObject *self, PyObject *args) { | ~~~~~~~~~~^~~~ meep-python.cxx: In function 'PyObject* _wrap_master_fprintf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cxx:125790:96: warning: unused parameter 'varargs' [-Wunused-parameter] 125790 | SWIGINTERN PyObject *_wrap_master_fprintf__varargs__(PyObject *self, PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function 'PyObject* _wrap_master_fprintf(PyObject*, PyObject*)': meep-python.cxx:125832:53: warning: unused parameter 'self' [-Wunused-parameter] 125832 | SWIGINTERN PyObject *_wrap_master_fprintf(PyObject *self, PyObject *args) { | ~~~~~~~~~~^~~~ In file included from meep-python.cxx:4060: typemap_utils.cpp: At global scope: typemap_utils.cpp:115:18: warning: 'PyObject* py_volume_object()' defined but not used [-Wunused-function] 115 | static PyObject *py_volume_object() { | ^~~~~~~~~~~~~~~~ libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c meep-python.cxx -fPIC -DPIC -o _meep_la-meep-python.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -module -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.11/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/13/crtbeginS.o .libs/_meep_la-meep-python.o -Wl,-rpath -Wl,/build/reproducible-path/meep-openmpi-1.25.0/src/.libs ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lquadmath -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/13/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,_meep.so.30 -o .libs/_meep.so.30.0.0 libtool: link: (cd ".libs" && rm -f "_meep.so.30" && ln -s "_meep.so.30.0.0" "_meep.so.30") libtool: link: (cd ".libs" && rm -f "_meep.so" && ln -s "_meep.so.30.0.0" "_meep.so") libtool: link: x86_64-linux-gnu-ar cr .libs/_meep.a _meep_la-meep-python.o libtool: link: x86_64-linux-gnu-ranlib .libs/_meep.a libtool: link: ( cd ".libs" && rm -f "_meep.la" && ln -s "../_meep.la" "_meep.la" ) mkdir -p meep/adjoint cp __init__.py ./binary_partition_utils.py ./chunk_balancer.py ./geom.py ./simulation.py ./source.py ./timing_measurements.py ./visualization.py ./materials.py ./verbosity_mgr.py .libs/_meep.so meep cp ./adjoint/__init__.py ./adjoint/basis.py ./adjoint/objective.py ./adjoint/optimization_problem.py ./adjoint/filters.py ./adjoint/filter_source.py ./adjoint/connectivity.py ./adjoint/wrapper.py ./adjoint/utils.py meep/adjoint make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' cp -f ./meep-pkgconfig meep.pc make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' make[2]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' make[1]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' echo amd64 amd64 if [ "amd64" = "armel" ] || \ [ "amd64" = "riscv64" ] || \ [ "amd64" = "mipsel" ] || \ [ "amd64" = "mips64el" ] || \ [ "amd64" = "hurd-i386" ] ; then \ echo "Do not make tests on this architecture" ;\ else \ echo "Do make tests on this architecture" ;\ make check; \ find; \ cat tests/test-suite.log; \ fi Do make tests on this architecture make[2]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' Making check in src make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make check-recursive make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' Making check in support make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' Making check in tests make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make aniso_disp bench bragg_transmission convergence_cyl_waveguide cylindrical dump_load flux harmonics integrate known_results near2far one_dimensional physical stress_tensor symmetry three_d two_dimensional 2D_convergence h5test pml pw-source-ll ring-ll cyl-ellipsoid-ll absorber-1d-ll array-slice-ll user-defined-material dft-fields gdsII-3d bend-flux-ll array-metadata make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o aniso_disp.o aniso_disp.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o aniso_disp aniso_disp.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/aniso_disp aniso_disp.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o bench.o bench.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o bench bench.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/bench bench.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o bragg_transmission.o bragg_transmission.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o bragg_transmission bragg_transmission.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/bragg_transmission bragg_transmission.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o convergence_cyl_waveguide.o convergence_cyl_waveguide.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/convergence_cyl_waveguide convergence_cyl_waveguide.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o cylindrical.o cylindrical.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now 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-Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/bend-flux-ll bend-flux-ll.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -c -o array-metadata.o array-metadata.cpp /bin/sh ../libtool --tag=CXX --mode=link mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o array-metadata array-metadata.o ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o .libs/array-metadata array-metadata.o ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make check-TESTS make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' PASS: aniso_disp PASS: bench PASS: bragg_transmission PASS: convergence_cyl_waveguide PASS: cylindrical PASS: dump_load PASS: flux PASS: harmonics PASS: integrate PASS: known_results PASS: near2far PASS: one_dimensional PASS: physical PASS: stress_tensor PASS: symmetry PASS: three_d PASS: two_dimensional PASS: 2D_convergence PASS: h5test PASS: pml ============================================================================ Testsuite summary for meep 1.25.0 ============================================================================ # TOTAL: 20 # PASS: 20 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' Making check in scheme make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make check-am make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' Making check in python make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make check-am make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make check-TESTS make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[6]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' FAIL: tests/test_3rd_harm_1d.py FAIL: tests/test_absorber_1d.py FAIL: tests/test_adjoint_solver.py FAIL: tests/test_adjoint_utils.py FAIL: tests/test_adjoint_cyl.py FAIL: tests/test_adjoint_jax.py FAIL: tests/test_antenna_radiation.py FAIL: tests/test_array_metadata.py FAIL: tests/test_bend_flux.py FAIL: tests/test_binary_partition_utils.py FAIL: tests/test_cavity_arrayslice.py FAIL: tests/test_cavity_farfield.py FAIL: tests/test_chunk_balancer.py FAIL: tests/test_chunk_layout.py FAIL: tests/test_chunks.py FAIL: tests/test_conductivity.py FAIL: tests/test_cyl_ellipsoid.py FAIL: tests/test_dft_energy.py FAIL: tests/test_dft_fields.py FAIL: tests/test_divide_mpi_processes.py FAIL: tests/test_dump_load.py FAIL: tests/test_eigfreq.py FAIL: tests/test_faraday_rotation.py FAIL: tests/test_field_functions.py FAIL: tests/test_force.py FAIL: tests/test_fragment_stats.py FAIL: tests/test_gaussianbeam.py FAIL: tests/test_geom.py FAIL: tests/test_get_point.py FAIL: tests/test_get_epsilon_grid.py FAIL: tests/test_holey_wvg_bands.py FAIL: tests/test_holey_wvg_cavity.py FAIL: tests/test_integrated_source.py FAIL: tests/test_ldos.py FAIL: tests/test_material_grid.py FAIL: tests/test_materials_library.py FAIL: tests/test_medium_evaluations.py FAIL: tests/test_multilevel_atom.py FAIL: tests/test_n2f_periodic.py FAIL: tests/test_oblique_source.py FAIL: tests/test_physical.py FAIL: tests/test_prism.py FAIL: tests/test_pw_source.py FAIL: tests/test_refl_angular.py FAIL: tests/test_ring.py FAIL: tests/test_ring_cyl.py FAIL: tests/test_simulation.py FAIL: tests/test_special_kz.py FAIL: tests/test_source.py FAIL: tests/test_timing_measurements.py FAIL: tests/test_user_defined_material.py FAIL: tests/test_visualization.py ============================================================================ Testsuite summary for meep 1.25.0 ============================================================================ # TOTAL: 52 # PASS: 0 # SKIP: 0 # XFAIL: 0 # FAIL: 52 # XPASS: 0 # ERROR: 0 ============================================================================ See python/test-suite.log ============================================================================ make[6]: *** [Makefile:1119: test-suite.log] Error 1 make[6]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[5]: *** [Makefile:1227: check-TESTS] Error 2 make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[4]: *** [Makefile:1292: check-am] Error 2 make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[3]: *** [Makefile:1294: check] Error 2 make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[2]: *** [Makefile:518: check-recursive] Error 1 make[2]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' . ./.sourcery.yaml ./.gitattributes ./AUTHORS ./configure.ac ./configure ./compile ./autom4te.cache ./autom4te.cache/traces.0 ./autom4te.cache/traces.1 ./autom4te.cache/traces.2 ./autom4te.cache/traces.3 ./autom4te.cache/output.3 ./autom4te.cache/output.0 ./autom4te.cache/output.1 ./autom4te.cache/requests ./autom4te.cache/output.2 ./libtool ./py-compile ./src ./src/material_data.lo ./src/structure_dump.cpp ./src/structure_dump.o ./src/fields.cpp ./src/near2far.cpp ./src/integrate2.lo ./src/structure.cpp ./src/anisotropic_averaging.o ./src/h5fields.lo ./src/dft.o ./src/update_pols.cpp ./src/random.lo 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./scheme/meep-ctl-const.hpp ./scheme/geom.cpp ./scheme/meep.i ./scheme/meep_op_renames.i ./scheme/meep_wrap.patch ./scheme/examples ./scheme/examples/parallel-wvgs-force.ctl ./scheme/examples/polarization_grating.ctl ./scheme/examples/binary_grating.ctl ./scheme/examples/refl-angular-kz2d.ctl ./scheme/examples/ring-cyl.ctl ./scheme/examples/solve-cw.ctl ./scheme/examples/absorbed-power-density.ctl ./scheme/examples/bend-flux.ctl ./scheme/examples/oblique-planewave.ctl ./scheme/examples/straight-waveguide.ctl ./scheme/examples/ring.ctl ./scheme/examples/mie-scattering.ctl ./scheme/examples/zone-plate.ctl ./scheme/examples/perturbation-theory-2d.ctl ./scheme/examples/cherenkov-radiation.ctl ./scheme/examples/differential-cross-section.ctl ./scheme/examples/parallel-wvgs-mpb.ctl ./scheme/examples/holey-wvg-bands.ctl ./scheme/examples/3rd-harm-1d.ctl ./scheme/examples/perturbation-theory.ctl ./scheme/examples/refl-angular.ctl ./scheme/examples/wvg_src.ctl ./scheme/examples/binary_grating_oblique.ctl ./scheme/examples/metasurface_lens_phasemap.ctl ./scheme/examples/cylinder-cross-section.ctl ./scheme/examples/mode-coeffs.ctl ./scheme/examples/holey-wvg-cavity.ctl ./scheme/examples/group-velocity.ctl ./scheme/examples/mode-decomposition.ctl ./scheme/examples/bent-waveguide.ctl ./scheme/examples/binary_grating_phasemap.ctl ./scheme/examples/chirped-pulse.ctl ./scheme/examples/pw-source.ctl ./scheme/examples/oblique-source.ctl ./scheme/examples/metal-cavity-ldos.ctl ./scheme/examples/faraday-rotation.ctl ./scheme/examples/metasurface_lens_farfield.ctl ./scheme/examples/material-dispersion.ctl ./scheme/examples/gaussian-beam.ctl ./scheme/examples/antenna-radiation.ctl ./scheme/examples/finite_grating.ctl ./scheme/examples/refl-quartz.ctl ./scheme/examples/multilevel-atom.ctl ./scheme/examples/binary_grating_n2f.ctl ./scheme/examples/stochastic-emitter.ctl ./scheme/examples/cavity-farfield.ctl ./scheme/meep-geom.o ./scheme/meep_enum_renames.i ./scheme/meep_swig_bug_workaround.i ./scheme/meep-main.o ./scheme/meep_wrap.cxx ./scheme/meep-meep.o ./scheme/ctl-io.h ./scheme/meep_wrap.cxx.bak ./scheme/Makefile ./scheme/Makefile.in ./scheme/ctl-io.i ./scheme/meep-enums.scm ./scheme/meep_wrap.cxx.orig ./scheme/meep_renames.i ./scheme/casimir.scm ./scheme/Makefile.am ./scheme/meep.cpp ./scheme/ctl-io.cpp ./scheme/meep-structure.o ./scheme/main.cpp ./scheme/meep.scm.in ./scheme/.libs ./scheme/.libs/meep ./scheme/meep-ctl-io.o ./scheme/meep.scm ./scheme/meep-meep_wrap.o ./scheme/meep ./ltmain.sh ./config.log ./.github ./.github/dependabot.yml ./.github/workflows ./.github/workflows/pre-commit.yml ./.github/workflows/build-san.yml ./.github/workflows/build-ci.yml ./meep.pc ./test-driver ./debian ./debian/copyright ./debian/libmeep-openmpi30.install ./debian/python3-meep-openmpi.prerm ./debian/libmeep-openmpi-dev.install ./debian/.debhelper ./debian/.debhelper/generated ./debian/.debhelper/generated/_source ./debian/.debhelper/generated/_source/home ./debian/.debhelper/generated/_source/home/.cache ./debian/.debhelper/generated/_source/home/.cache/guile ./debian/.debhelper/generated/_source/home/.cache/guile/ccache ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6 ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl/base ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl/base/include.scm.go ./debian/meep-openmpi.docs ./debian/libmeep-openmpi30.lintian-overrides ./debian/python3-meep-openmpi.postinst ./debian/autoreconf.after ./debian/docs ./debian/meep-openmpi.manpages ./debian/meep-openmpi.1 ./debian/autoreconf.before ./debian/changelog ./debian/source ./debian/source/format ./debian/source/lintian-overrides ./debian/README.source ./debian/patches ./debian/patches/i386-fix.patch ./debian/patches/series ./debian/python3-meep-openmpi.install ./debian/meep-openmpi.install ./debian/control ./debian/watch ./debian/not-installed ./debian/rules ./contrib ./contrib/build-meep.sh ./TODO ./aclocal.m4 ./index.md ./python ./python/timing_measurements.py ./python/binary_partition_utils.py ./python/meep.i ./python/vec.i ./python/_meep_la-meep-python.o ./python/geom.py ./python/meep-python.hpp ./python/_meep_la-meep-python.lo ./python/examples ./python/examples/wvg-src.py ./python/examples/mie_scattering.ipynb ./python/examples/mode-decomposition.ipynb ./python/examples/oblique-source.py ./python/examples/3rd-harm-1d.ipynb ./python/examples/finite_grating.ipynb ./python/examples/stochastic_emitter.py ./python/examples/eps_fit_lorentzian.py ./python/examples/planar_cavity_ldos.py ./python/examples/antenna-radiation.py ./python/examples/metal-cavity-ldos.py ./python/examples/antenna-radiation.ipynb ./python/examples/bent-waveguide.ipynb ./python/examples/binary_grating_oblique.py ./python/examples/multilevel-atom.py ./python/examples/faraday-rotation.py ./python/examples/straight-waveguide.ipynb ./python/examples/pw-source.py ./python/examples/bent-waveguide.py ./python/examples/bend-flux.py ./python/examples/mode-decomposition.py ./python/examples/binary_grating_phasemap.py ./python/examples/cavity_arrayslice.py ./python/examples/stochastic_emitter_line.py ./python/examples/straight-waveguide.py ./python/examples/cherenkov-radiation.py ./python/examples/parallel-wvgs-force.ipynb ./python/examples/perturbation_theory.ipynb ./python/examples/oblique-source.ipynb ./python/examples/metal-cavity-ldos.ipynb ./python/examples/perturbation_theory.py ./python/examples/mpb_bragg_sine.py ./python/examples/cylinder_cross_section.py ./python/examples/absorbed_power_density.ipynb ./python/examples/bend-flux.ipynb ./python/examples/parallel-wvgs-mpb.py ./python/examples/refl-angular.ipynb ./python/examples/chirped_pulse.py ./python/examples/mpb_honey_rods.py ./python/examples/coupler.gds ./python/examples/finite_grating.py ./python/examples/stochastic_emitter.ipynb ./python/examples/zone_plate.ipynb ./python/examples/stochastic_emitter_reciprocity.py ./python/examples/extraction_eff_ldos.py ./python/examples/holey-wvg-cavity.ipynb ./python/examples/refl-quartz.ipynb ./python/examples/ring-cyl.py ./python/examples/metasurface_lens.ipynb ./python/examples/ring_gds.py ./python/examples/parallel-wvgs-force.py ./python/examples/differential_cross_section.ipynb ./python/examples/solve-cw.py ./python/examples/coupler.ipynb ./python/examples/mie_scattering.py ./python/examples/antenna_pec_ground_plane.py ./python/examples/cavity-farfield.py ./python/examples/binary_grating_n2f.py ./python/examples/absorbed_power_density.py ./python/examples/mpb_tri_holes.py ./python/examples/mpb_tutorial.py ./python/examples/diffracted_planewave.py ./python/examples/mpb_bragg.py ./python/examples/ring.py ./python/examples/cylinder_cross_section.ipynb ./python/examples/grating2d_triangular_lattice.py ./python/examples/mpb_strip.py ./python/examples/refl-angular.py ./python/examples/adjoint_optimization ./python/examples/adjoint_optimization/Fourier-Bend.ipynb ./python/examples/adjoint_optimization/02-Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/06-Near2Far-Epigraph.ipynb ./python/examples/adjoint_optimization/05-Near2Far.ipynb ./python/examples/adjoint_optimization/Bend Minimax.ipynb ./python/examples/adjoint_optimization/04-Splitter.ipynb ./python/examples/adjoint_optimization/Fourier-Metalens.ipynb ./python/examples/adjoint_optimization/03-Filtered_Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints ./python/examples/adjoint_optimization/.ipynb_checkpoints/06-Near2Far-Epigraph-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/04-Splitter-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/02-Waveguide_Bend-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/05-Near2Far-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/Bend Minimax-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/03-Filtered_Waveguide_Bend-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/01-Introduction-checkpoint.ipynb ./python/examples/adjoint_optimization/01-Introduction.ipynb ./python/examples/polarization_grating.py ./python/examples/mpb_diamond.py ./python/examples/coupler.py ./python/examples/ring.ipynb ./python/examples/absorber-1d.py ./python/examples/solve-cw.ipynb ./python/examples/oblique-planewave.py ./python/examples/holey-wvg-cavity.py ./python/examples/refl-quartz.py ./python/examples/binary_grating_oblique.ipynb ./python/examples/mpb_hole_slab.py ./python/examples/mpb_sq_rods.py ./python/examples/media ./python/examples/media/oblique-source-normal.mp4 ./python/examples/media/visualization_normalize.mp4 ./python/examples/media/straight_waveguide.mp4 ./python/examples/media/oblique-source-eig.mp4 ./python/examples/media/bent_waveguide.mp4 ./python/examples/media/ring_large.mp4 ./python/examples/media/ring_mid.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.1896.mp4 ./python/examples/media/holey-wvg-bands-0.1-0.4811.mp4 ./python/examples/media/visualization_demo.gif ./python/examples/media/ring_simple.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.3175.mp4 ./python/examples/media/visualization_demo.mp4 ./python/examples/media/hole-wvg-cavity.mp4 ./python/examples/media/holey-wvg-bands-0.25-0.2506.mp4 ./python/examples/media/hole-wvg-cavity-res.mp4 ./python/examples/media/visualization_out_plane.mp4 ./python/examples/media/holey-wvg-bands-0.3-0.8838.mp4 ./python/examples/mpb_tri_rods.py ./python/examples/cavity-farfield.ipynb ./python/examples/differential_cross_section.py ./python/examples/holey-wvg-bands.ipynb ./python/examples/mpb_data_analysis.py ./python/examples/phase_in_material.py ./python/examples/3rd-harm-1d.py ./python/examples/polarization_grating.ipynb ./python/examples/gaussian-beam.py ./python/examples/refl-angular-kz2d.py ./python/examples/oblique-planewave.ipynb ./python/examples/binary_grating_n2f.ipynb ./python/examples/metasurface_lens.py ./python/examples/ring-mode-overlap.py ./python/examples/binary_grating.py ./python/examples/material-dispersion.py ./python/examples/binary_grating_phasemap.ipynb ./python/examples/mpb_line_defect.py ./python/examples/binary_grating.ipynb ./python/examples/perturbation_theory_2d.py ./python/examples/README.md ./python/examples/holey-wvg-bands.py ./python/examples/zone_plate.py ./python/examples/cyl-ellipsoid.py ./python/meep.py ./python/requirements.txt ./python/verbosity_mgr.py ./python/simulation.py ./python/adjoint ./python/adjoint/basis.py ./python/adjoint/wrapper.py ./python/adjoint/utils.py ./python/adjoint/connectivity.py ./python/adjoint/__init__.py ./python/adjoint/filters.py ./python/adjoint/optimization_problem.py ./python/adjoint/filter_source.py ./python/adjoint/objective.py ./python/visualization.py ./python/Makefile ./python/chunk_balancer.py ./python/Makefile.in ./python/materials.py ./python/mpb_data.py ./python/solver.py ./python/mpb.i ./python/tests ./python/tests/test_mpb.py ./python/tests/test_geom.trs ./python/tests/test_ring_cyl.py ./python/tests/test_cyl_ellipsoid.py ./python/tests/test_cavity_arrayslice.py ./python/tests/test_adjoint_cyl.trs ./python/tests/test_oblique_source.log ./python/tests/test_ldos.log ./python/tests/test_field_functions.trs ./python/tests/test_refl_angular.py ./python/tests/test_adjoint_cyl.log ./python/tests/test_force.log ./python/tests/test_visualization.log ./python/tests/test_get_point.py ./python/tests/test_chunk_balancer.py ./python/tests/test_eigfreq.trs ./python/tests/test_holey_wvg_bands.log ./python/tests/test_n2f_periodic.trs ./python/tests/test_force.trs ./python/tests/test_special_kz.trs ./python/tests/test_adjoint_utils.log ./python/tests/test_cavity_arrayslice.log ./python/tests/test_divide_mpi_processes.log ./python/tests/test_faraday_rotation.log ./python/tests/test_get_point.log ./python/tests/test_conductivity.py ./python/tests/test_fragment_stats.trs ./python/tests/test_medium_evaluations.log ./python/tests/test_cavity_farfield.trs ./python/tests/test_pw_source.trs ./python/tests/test_medium_evaluations.py ./python/tests/test_medium_evaluations.trs ./python/tests/test_multilevel_atom.py ./python/tests/test_integrated_source.py ./python/tests/test_antenna_radiation.log ./python/tests/test_materials_library.trs ./python/tests/test_adjoint_jax.trs ./python/tests/test_chunk_layout.trs ./python/tests/test_adjoint_utils.py ./python/tests/test_chunks.log ./python/tests/test_chunks.py ./python/tests/test_timing_measurements.py ./python/tests/test_user_defined_material.py ./python/tests/test_dft_energy.log ./python/tests/test_mode_decomposition.py ./python/tests/test_bend_flux.py ./python/tests/test_cyl_ellipsoid.trs ./python/tests/test_dft_fields.log ./python/tests/test_cavity_arrayslice.trs ./python/tests/test_ldos.py ./python/tests/test_3rd_harm_1d.log ./python/tests/test_material_grid.py ./python/tests/test_user_defined_material.trs ./python/tests/test_material_grid.log ./python/tests/test_mode_coeffs.py ./python/tests/test_ring_cyl.log ./python/tests/test_conductivity.log ./python/tests/test_binary_partition_utils.py ./python/tests/test_source.trs ./python/tests/test_diffracted_planewave.py ./python/tests/test_integrated_source.trs ./python/tests/test_faraday_rotation.trs ./python/tests/data ./python/tests/data/tutorial-d.k16.b08.te.h5 ./python/tests/data/diamond-dpwr.k06.b05.h5 ./python/tests/data/cavity_arrayslice_1d.npy ./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 ./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 ./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b02.te.h5 ./python/tests/data/nonconvex_prism_vertices3.npz ./python/tests/data/cavity-farfield.h5 ./python/tests/data/tutorial-te-eigenvectors-3-3.h5 ./python/tests/data/tutorial-b.k16.b08.te.h5 ./python/tests/data/cavity-farfield-4-freqs.h5 ./python/tests/data/tutorial-te-eigenvectors-8-1.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 ./python/tests/data/subpixel_avg-epsilon.h5 ./python/tests/data/tutorial-h.k16.b08.te.h5 ./python/tests/data/tutorial-epsilon.h5 ./python/tests/data/bragg-h.k01.b08.y.tm.h5 ./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 ./python/tests/data/spiral.gds ./python/tests/data/tutorial-e.k16.b08.te.h5 ./python/tests/data/tutorial-e.k16.b08.z.tm.h5 ./python/tests/data/tutorial-mu.h5 ./python/tests/data/tutorial-C.k16.b08.te.h5 ./python/tests/data/converted-diamond-dpwr.k06.b05.h5 ./python/tests/data/tutorial-flux.v.k11.b08.te.h5 ./python/tests/data/strip-flux.v.k01.b04.x.h5 ./python/tests/data/eps_input_file_test.h5 ./python/tests/data/tutorial-te-eigenvectors.h5 ./python/tests/data/convex_prism_vertices.npz ./python/tests/data/nonconvex_prism_vertices2.npz ./python/tests/data/amp_func_file.h5 ./python/tests/data/nonconvex_prism_vertices1.npz ./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 ./python/tests/data/cavity_arrayslice_2d.npy ./python/tests/data/tutorial-d.k01.b02.te.h5 ./python/tests/data/bend-flux.gds ./python/tests/data/line-defect-e.k04.b12.z.tm.h5 ./python/tests/test_cavity_farfield.py ./python/tests/test_source.py ./python/tests/test_bend_flux.log ./python/tests/test_refl_angular.log ./python/tests/test_chunk_balancer.log ./python/tests/test_prism.trs ./python/tests/test_fragment_stats.py ./python/tests/test_force.py ./python/tests/test_timing_measurements.trs ./python/tests/test_holey_wvg_bands.py ./python/tests/test_field_functions.log ./python/tests/test_dft_energy.py ./python/tests/test_get_epsilon_grid.log ./python/tests/test_ring.trs ./python/tests/test_multilevel_atom.log ./python/tests/test_array_metadata.log ./python/tests/test_absorber_1d.trs ./python/tests/test_physical.py ./python/tests/test_simulation.trs ./python/tests/test_antenna_radiation.trs ./python/tests/test_physical.log ./python/tests/test_holey_wvg_bands.trs ./python/tests/test_adjoint_cyl.py ./python/tests/test_chunk_layout.py ./python/tests/test_holey_wvg_cavity.log ./python/tests/test_special_kz.py ./python/tests/test_ring.py ./python/tests/test_adjoint_utils.trs ./python/tests/test_physical.trs ./python/tests/test_oblique_source.py ./python/tests/test_fragment_stats.log ./python/tests/test_gaussianbeam.log ./python/tests/test_cyl_ellipsoid.log ./python/tests/test_array_metadata.trs ./python/tests/test_n2f_periodic.log ./python/tests/utils.py ./python/tests/test_geom.py ./python/tests/test_bend_flux.trs ./python/tests/test_material_dispersion.py ./python/tests/test_prism.py ./python/tests/test_holey_wvg_cavity.py ./python/tests/test_kdom.py ./python/tests/test_prism.log ./python/tests/test_cavity_farfield.log ./python/tests/test_faraday_rotation.py ./python/tests/test_refl_angular.trs ./python/tests/test_dft_fields.py ./python/tests/test_dft_energy.trs ./python/tests/test_adjoint_solver.trs ./python/tests/test_absorber_1d.log ./python/tests/test_adjoint_solver.log ./python/tests/test_array_metadata.py ./python/tests/test_chunks.trs ./python/tests/test_3rd_harm_1d.py ./python/tests/test_adjoint_jax.log ./python/tests/test_eigfreq.py ./python/tests/test_adjoint_jax.py ./python/tests/test_3rd_harm_1d.trs ./python/tests/test_divide_mpi_processes.trs ./python/tests/test_absorber_1d.py ./python/tests/test_dft_fields.trs ./python/tests/test_get_epsilon_grid.py ./python/tests/test_dump_load.trs ./python/tests/test_gaussianbeam.trs ./python/tests/test_materials_library.py ./python/tests/test_get_epsilon_grid.trs ./python/tests/test_visualization.trs ./python/tests/test_dump_load.log ./python/tests/test_materials_library.log ./python/tests/test_integrated_source.log ./python/tests/test_simulation.log ./python/tests/test_timing_measurements.log ./python/tests/test_material_grid.trs ./python/tests/test_antenna_radiation.py ./python/tests/test_special_kz.log ./python/tests/test_simulation.py ./python/tests/test_binary_partition_utils.trs ./python/tests/test_ldos.trs ./python/tests/test_adjoint_solver.py ./python/tests/test_ring_cyl.trs ./python/tests/test_pw_source.py ./python/tests/test_conductivity.trs ./python/tests/test_source.log ./python/tests/test_geom.log ./python/tests/test_verbosity_mgr.py ./python/tests/test_wvg_src.py ./python/tests/test_field_functions.py ./python/tests/test_chunk_layout.log ./python/tests/test_n2f_periodic.py ./python/tests/test_holey_wvg_cavity.trs ./python/tests/test_dispersive_eigenmode.py ./python/tests/test_eigfreq.log ./python/tests/__pycache__ ./python/tests/__pycache__/utils.cpython-311.pyc ./python/tests/test_gaussianbeam.py ./python/tests/test_binary_grating.py ./python/tests/test_visualization.py ./python/tests/test_oblique_source.trs ./python/tests/test_pw_source.log ./python/tests/test_divide_mpi_processes.py ./python/tests/test_multilevel_atom.trs ./python/tests/test_get_point.trs ./python/tests/test_user_defined_material.log ./python/tests/test_dump_load.py ./python/tests/test_binary_partition_utils.log ./python/tests/test_ring.log ./python/tests/test_chunk_balancer.trs ./python/Makefile.am ./python/meep-python.cxx ./python/typemap_utils.cpp ./python/__init__.py ./python/numpy.i ./python/.libs ./python/.libs/_meep_la-meep-python.o ./python/.libs/_meep.so.30.0.0 ./python/.libs/_meep.so ./python/.libs/_meep.lai ./python/.libs/_meep.a ./python/.libs/_meep.la ./python/.libs/_meep.so.30 ./python/_meep.la ./python/test-suite.log ./python/source.py ./python/meep ./python/meep/timing_measurements.py ./python/meep/binary_partition_utils.py ./python/meep/geom.py ./python/meep/verbosity_mgr.py ./python/meep/simulation.py ./python/meep/adjoint ./python/meep/adjoint/basis.py ./python/meep/adjoint/wrapper.py ./python/meep/adjoint/utils.py ./python/meep/adjoint/connectivity.py ./python/meep/adjoint/__init__.py ./python/meep/adjoint/filters.py ./python/meep/adjoint/optimization_problem.py ./python/meep/adjoint/filter_source.py ./python/meep/adjoint/objective.py ./python/meep/visualization.py ./python/meep/chunk_balancer.py ./python/meep/_meep.so ./python/meep/materials.py ./python/meep/__init__.py ./python/meep/__pycache__ ./python/meep/__pycache__/__init__.cpython-311.pyc ./python/meep/__pycache__/verbosity_mgr.cpython-311.pyc ./python/meep/__pycache__/geom.cpython-311.pyc ./python/meep/__pycache__/source.cpython-311.pyc ./python/meep/__pycache__/simulation.cpython-311.pyc ./python/meep/source.py ./install-sh ./version.sh ./tests ./tests/aniso_disp ./tests/array-slice-ll ./tests/physical.o ./tests/2D_convergence.log ./tests/near2far.cpp ./tests/symmetry.cpp ./tests/near2far.log ./tests/physical.trs ./tests/two_dimensional.log ./tests/flux.trs ./tests/known_results.cpp ./tests/bend-flux-ll ./tests/bench.log ./tests/array-metadata.cpp ./tests/one_dimensional.cpp ./tests/three_d.cpp ./tests/bench.cpp ./tests/cylindrical.o ./tests/two_dimensional ./tests/harmonics.o ./tests/gdsII-3d.cpp ./tests/near2far.o ./tests/h5test.cpp ./tests/convergence_cyl_waveguide.log ./tests/cyl-ellipsoid-ll.cpp ./tests/cylindrical.cpp ./tests/physical ./tests/h5test.o ./tests/convergence_cyl_waveguide ./tests/ring-ll.o ./tests/two_dimensional.o ./tests/three_d ./tests/flux.o ./tests/flux ./tests/gdsII-3d.o ./tests/one_dimensional.trs ./tests/bench.o ./tests/stress_tensor.o ./tests/pml.o ./tests/absorber-1d-ll.cpp ./tests/array-slice-ll-ref.h5 ./tests/ring-ll ./tests/dump_load.cpp ./tests/near2far ./tests/aniso_disp.o ./tests/pw-source-ll.cpp ./tests/bragg_transmission.o ./tests/bragg_transmission.log ./tests/aniso_disp.cpp ./tests/physical.log ./tests/symmetry.trs ./tests/stress_tensor.cpp ./tests/integrate.cpp ./tests/three_d.log ./tests/cyl-ellipsoid-ll.o ./tests/one_dimensional ./tests/stress_tensor ./tests/known_results.o ./tests/2D_convergence.cpp ./tests/array-slice-ll.o ./tests/one_dimensional.log ./tests/cylindrical.trs ./tests/bragg_transmission.cpp ./tests/aniso_disp.log ./tests/dft-fields ./tests/bragg_transmission.trs ./tests/dump_load.log ./tests/integrate.o ./tests/pw-source-ll.o ./tests/Makefile ./tests/integrate.log ./tests/absorber-1d-ll ./tests/h5test ./tests/Makefile.in ./tests/physical.cpp ./tests/known_results.trs ./tests/harmonics ./tests/user-defined-material.cpp ./tests/2D_convergence.o ./tests/2D_convergence.trs ./tests/harmonics.cpp ./tests/symmetry.log 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./tests/user-defined-material ./tests/cyl-ellipsoid-eps-ref.h5 ./tests/gdsII-3d ./tests/cylindrical ./doc ./doc/meep-logos.svg ./doc/docs ./doc/docs/mathjaxhelper.js ./doc/docs/Introduction.md ./doc/docs/Acknowledgements.md ./doc/docs/Synchronizing_the_Magnetic_and_Electric_Fields.md ./doc/docs/Chunks_and_Symmetry.md ./doc/docs/The_Run_Function_Is_Not_A_Loop.md ./doc/docs/Replacements.vim ./doc/docs/Build_From_Source.md ./doc/docs/FAQ.md ./doc/docs/Eigensolver_Math.md ./doc/docs/C++_Developer_Information.md ./doc/docs/Python_User_Interface.md.in ./doc/docs/License_and_Copyright.md ./doc/docs/Python_Tutorials ./doc/docs/Python_Tutorials/Basics.md ./doc/docs/Python_Tutorials/Third_Harmonic_Generation.md ./doc/docs/Python_Tutorials/GDSII_Import.md ./doc/docs/Python_Tutorials/Custom_Source.md ./doc/docs/Python_Tutorials/Cylindrical_Coordinates.md ./doc/docs/Python_Tutorials/Adjoint_Solver.md ./doc/docs/Python_Tutorials/Local_Density_of_States.md 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./doc/docs/Guile_and_Scheme_Information.md ./doc/docs/Exploiting_Symmetry.md ./doc/docs/Yee_Lattice.md ./doc/docs/css ./doc/docs/css/extra.css ./doc/docs/Scheme_Tutorials ./doc/docs/Scheme_Tutorials/Basics.md ./doc/docs/Scheme_Tutorials/Third_Harmonic_Generation.md ./doc/docs/Scheme_Tutorials/Custom_Source.md ./doc/docs/Scheme_Tutorials/Cylindrical_Coordinates.md ./doc/docs/Scheme_Tutorials/Local_Density_of_States.md ./doc/docs/Scheme_Tutorials/Material_Dispersion.md ./doc/docs/Scheme_Tutorials/Frequency_Domain_Solver.md ./doc/docs/Scheme_Tutorials/Multilevel_Atomic_Susceptibility.md ./doc/docs/Scheme_Tutorials/Near_to_Far_Field_Spectra.md ./doc/docs/Scheme_Tutorials/Casimir_Forces.md ./doc/docs/Scheme_Tutorials/Gyrotropic_Media.md ./doc/docs/Scheme_Tutorials/Mode_Decomposition.md ./doc/docs/Scheme_Tutorials/Eigenmode_Source.md ./doc/docs/Scheme_Tutorials/Optical_Forces.md ./doc/docs/Scheme_Tutorials/Resonant_Modes_and_Transmission_in_a_Waveguide_Cavity.md ./doc/docs/Developer_Codes ./doc/docs/Developer_Codes/WriteChunkInfo.cpp ./doc/docs/Developer_Codes/Makefile.manual ./doc/docs/Perfectly_Matched_Layer.md ./doc/docs/Field_Functions.md ./doc/docs/mdx_math.py ./doc/docs/index.md ./doc/docs/Materials.md ./doc/docs/setup.py ./doc/docs/Subpixel_Smoothing.md ./doc/docs/Mode_Decomposition.md ./doc/docs/Installation.md ./doc/docs/Download.md ./doc/docs/Units_and_Nonlinearity.md ./doc/docs/C++_Tutorial.md ./doc/docs/2d_Cell_Special_kz.md ./doc/requirements.txt ./doc/_api_snippets ./doc/_api_snippets/class_template.md ./doc/_api_snippets/function_template.md ./doc/_api_snippets/method_template.md ./doc/generate_py_api.py ./doc/README.md ./Makefile.am ./NEWS.md ./add_type_hints.xonsh ./meep-pkgconfig ./missing ./config.status ./COPYRIGHT ./mkdocs.yml ./.pc ./.pc/i386-fix.patch ./.pc/i386-fix.patch/src ./.pc/i386-fix.patch/src/mympi.cpp ./.pc/.quilt_patches ./.pc/applied-patches ./.pc/.version ./.pc/.quilt_series ./README.md ======================================= meep 1.25.0: tests/test-suite.log ======================================= # TOTAL: 20 # PASS: 20 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 make[1]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with autoreconf dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' dh_installchangelogs NEWS.md dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' Making install in src make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make install-recursive make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' Making install in support make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[6]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src/support' make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[6]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/src' /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libmeep.so.30.0.0 /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.so.30.0.0 libtool: install: (cd /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmeep.so.30.0.0 libmeep.so.30 || { rm -f libmeep.so.30 && ln -s libmeep.so.30.0.0 libmeep.so.30; }; }) libtool: install: (cd /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmeep.so.30.0.0 libmeep.so || { rm -f libmeep.so && ln -s libmeep.so.30.0.0 libmeep.so; }; }) libtool: install: /usr/bin/install -c .libs/libmeep.lai /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.la libtool: install: /usr/bin/install -c .libs/libmeep.a /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a libtool: install: chmod 644 /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a libtool: install: x86_64-linux-gnu-ranlib /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/include' /usr/bin/install -c -m 644 meep.hpp '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/include' /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 meep/mympi.hpp meep/vec.hpp meep/meep-config.h meepgeom.hpp material_data.hpp adjust_verbosity.hpp '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/include/meep' make[6]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/src' Making install in tests make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/tests' Making install in scheme make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make install-am make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/bin' /bin/sh ../libtool --mode=install /usr/bin/install -c meep '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/bin' libtool: warning: '../src/libmeep.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/meep /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/bin/meep /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/share/meep' /usr/bin/install -c -m 644 meep.scm meep-enums.scm casimir.scm materials.scm '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/share/meep' make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/scheme' Making install in python make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make install-am make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[5]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' /bin/sh ../libtool --mode=install /usr/bin/install -c _meep.la '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' libtool: warning: relinking '_meep.la' libtool: install: (cd /build/reproducible-path/meep-openmpi-1.25.0/python; /bin/sh "/build/reproducible-path/meep-openmpi-1.25.0/libtool" --tag CXX --mode=relink mpic++ -g -O2 -ffile-prefix-map=/build/reproducible-path/meep-openmpi-1.25.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -W -module -version-info 30:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o _meep.la -rpath /usr/lib/python3.11/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lm -lquadmath -inst-prefix-dir /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp) libtool: relink: mpic++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/13/crtbeginS.o .libs/_meep_la-meep-python.o -L/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lmeep -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/13 -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/13/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/13/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lfftw3 -lgfortran -lquadmath -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/13/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -Wl,-soname -Wl,_meep.so.30 -o .libs/_meep.so.30.0.0 libtool: install: /usr/bin/install -c .libs/_meep.so.30.0.0T /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30.0.0 libtool: install: (cd /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep && { ln -s -f _meep.so.30.0.0 _meep.so.30 || { rm -f _meep.so.30 && ln -s _meep.so.30.0.0 _meep.so.30; }; }) libtool: install: (cd /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep && { ln -s -f _meep.so.30.0.0 _meep.so || { rm -f _meep.so && ln -s _meep.so.30.0.0 _meep.so; }; }) libtool: install: /usr/bin/install -c .libs/_meep.lai /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.la libtool: install: /usr/bin/install -c .libs/_meep.a /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.a libtool: install: chmod 644 /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.a libtool: install: x86_64-linux-gnu-ranlib /build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.a libtool: warning: remember to run 'libtool --finish /usr/lib/python3.11/site-packages/meep' /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint' /usr/bin/install -c -m 644 ./adjoint/__init__.py ./adjoint/basis.py ./adjoint/objective.py ./adjoint/optimization_problem.py ./adjoint/filters.py ./adjoint/filter_source.py ./adjoint/connectivity.py ./adjoint/wrapper.py ./adjoint/utils.py '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint' Byte-compiling python modules... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.pyconnectivity.pywrapper.pyutils.py Byte-compiling python modules (optimized versions) ... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.pyconnectivity.pywrapper.pyutils.py /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' /usr/bin/install -c -m 644 __init__.py ./binary_partition_utils.py ./chunk_balancer.py ./geom.py ./simulation.py ./source.py ./timing_measurements.py ./visualization.py ./materials.py ./verbosity_mgr.py '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/python3.11/site-packages/meep' Byte-compiling python modules... __init__.pybinary_partition_utils.pychunk_balancer.pygeom.pysimulation.pysource.pytiming_measurements.pyvisualization.pymaterials.pyverbosity_mgr.py Byte-compiling python modules (optimized versions) ... __init__.pybinary_partition_utils.pychunk_balancer.pygeom.pysimulation.pysource.pytiming_measurements.pyvisualization.pymaterials.pyverbosity_mgr.py make install-data-hook make[6]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[6]: Nothing to be done for 'install-data-hook'. make[6]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[5]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0/python' make[3]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' make[4]: Entering directory '/build/reproducible-path/meep-openmpi-1.25.0' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 meep.pc '/build/reproducible-path/meep-openmpi-1.25.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' make[4]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' make[3]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' make[2]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' find . ./.sourcery.yaml ./.gitattributes ./AUTHORS ./configure.ac ./configure ./compile ./autom4te.cache ./autom4te.cache/traces.0 ./autom4te.cache/traces.1 ./autom4te.cache/traces.2 ./autom4te.cache/traces.3 ./autom4te.cache/output.3 ./autom4te.cache/output.0 ./autom4te.cache/output.1 ./autom4te.cache/requests ./autom4te.cache/output.2 ./libtool ./py-compile ./src ./src/material_data.lo ./src/structure_dump.cpp ./src/structure_dump.o ./src/fields.cpp ./src/near2far.cpp ./src/integrate2.lo ./src/structure.cpp ./src/anisotropic_averaging.o ./src/h5fields.lo ./src/dft.o ./src/update_pols.cpp ./src/random.lo ./src/energy_and_flux.o ./src/mympi.o ./src/dft.lo ./src/initialize.lo ./src/boundaries.lo ./src/h5file.cpp ./src/susceptibility.lo ./src/random.o ./src/meepgeom.cpp ./src/loop_in_chunks.cpp ./src/update_eh.lo ./src/near2far.o ./src/stress.cpp ./src/vec.lo ./src/cw_fields.cpp ./src/fields.o ./src/array_slice.o ./src/h5file.lo ./src/update_pols.o ./src/adjust_verbosity.hpp ./src/step_generic.o ./src/array_slice.cpp ./src/structure.lo ./src/boundaries.cpp ./src/output_directory.o ./src/bicgstab.lo ./src/susceptibility.cpp ./src/time.o ./src/fields.lo ./src/stress.lo ./src/casimir.lo ./src/vec.cpp ./src/step.lo ./src/step_generic_stride1.lo ./src/step.o ./src/dft.cpp ./src/material_data.o ./src/output_directory.cpp ./src/bicgstab.cpp ./src/fix_boundary_sources.lo ./src/initialize.cpp ./src/meep_internals.hpp ./src/fields_dump.cpp ./src/monitor.cpp ./src/integrate.cpp ./src/update_eh.o ./src/boundaries.o ./src/multilevel-atom.cpp ./src/fix_boundary_sources.o ./src/sphere_quad ./src/mympi.lo ./src/mpb.lo ./src/GDSIIgeom.o ./src/integrate.o ./src/Makefile ./src/monitor.o ./src/dft_ldos.cpp ./src/multilevel-atom.o ./src/Makefile.in ./src/energy_and_flux.lo ./src/step_generic_stride1.cpp ./src/h5file.o ./src/sphere-quad.o ./src/bicgstab.o ./src/dft_ldos.lo ./src/energy_and_flux.cpp ./src/update_eh.cpp ./src/h5fields.o ./src/vec.o ./src/bands.cpp ./src/fix_boundary_sources.cpp ./src/step_db.cpp ./src/step_db.lo ./src/bicgstab.hpp ./src/near2far.lo ./src/step_generic.cpp ./src/cw_fields.o ./src/GDSIIgeom.cpp ./src/step_db.o ./src/output_directory.lo ./src/GDSIIgeom.lo ./src/mpb.o ./src/meepgeom.o ./src/dft_ldos.o ./src/array_slice.lo ./src/material_data.hpp ./src/bands.lo ./src/step_generic.lo ./src/loop_in_chunks.lo ./src/update_pols.lo ./src/structure_dump.lo ./src/stress.o ./src/anisotropic_averaging.lo ./src/Makefile.am ./src/time.cpp ./src/sources.lo ./src/casimir.o ./src/casimir.cpp ./src/sphere-quad.h ./src/mpb.cpp ./src/material_data.cpp ./src/structure.o ./src/fields_dump.lo ./src/sources.o ./src/meepgeom.hpp ./src/random.cpp ./src/integrate2.o ./src/integrate.lo ./src/integrate2.cpp ./src/bands.o ./src/sources.cpp ./src/anisotropic_averaging.cpp ./src/.libs ./src/.libs/structure_dump.o ./src/.libs/libmeep.a ./src/.libs/anisotropic_averaging.o ./src/.libs/dft.o ./src/.libs/energy_and_flux.o ./src/.libs/mympi.o ./src/.libs/random.o ./src/.libs/near2far.o ./src/.libs/libmeep.lai ./src/.libs/fields.o ./src/.libs/array_slice.o ./src/.libs/update_pols.o ./src/.libs/step_generic.o ./src/.libs/output_directory.o ./src/.libs/time.o ./src/.libs/step.o ./src/.libs/material_data.o ./src/.libs/update_eh.o ./src/.libs/boundaries.o ./src/.libs/libmeep.so.30.0.0 ./src/.libs/fix_boundary_sources.o ./src/.libs/GDSIIgeom.o ./src/.libs/integrate.o ./src/.libs/monitor.o ./src/.libs/multilevel-atom.o ./src/.libs/h5file.o ./src/.libs/bicgstab.o ./src/.libs/h5fields.o ./src/.libs/vec.o ./src/.libs/libmeep.so ./src/.libs/cw_fields.o ./src/.libs/step_db.o ./src/.libs/mpb.o ./src/.libs/meepgeom.o ./src/.libs/dft_ldos.o ./src/.libs/stress.o ./src/.libs/casimir.o ./src/.libs/structure.o ./src/.libs/sources.o ./src/.libs/integrate2.o ./src/.libs/libmeep.so.30 ./src/.libs/bands.o ./src/.libs/loop_in_chunks.o ./src/.libs/step_generic_stride1.o ./src/.libs/susceptibility.o ./src/.libs/fields_dump.o ./src/.libs/libmeep.la ./src/.libs/initialize.o ./src/time.lo ./src/loop_in_chunks.o ./src/step_generic_stride1.o ./src/susceptibility.o ./src/meep.hpp ./src/mympi.cpp ./src/meepgeom.lo ./src/step.cpp ./src/meep ./src/meep/mympi.hpp ./src/meep/meep-config.h ./src/meep/meep-config.h.in ./src/meep/vec.hpp ./src/support ./src/support/libsupport.la ./src/support/mt19937ar.c ./src/support/Makefile ./src/support/Makefile.in ./src/support/mt19937ar.lo ./src/support/Makefile.am ./src/support/meep_mt.h ./src/support/.libs ./src/support/.libs/libsupport.la ./src/support/.libs/mt19937ar.o ./src/support/.libs/libsupport.a ./src/support/mt19937ar.o ./src/monitor.lo ./src/fields_dump.o ./src/cw_fields.lo ./src/libmeep.la ./src/h5fields.cpp ./src/multilevel-atom.lo ./src/initialize.o ./src/sphere-quad.cpp ./.flake8 ./config.h ./autogen.sh ./config.sub ./codecov.yml ./m4 ./m4/ax_gcc_archflag.m4 ./m4/ax_gcc_x86_cpuid.m4 ./m4/pkg.m4 ./m4/lt~obsolete.m4 ./m4/ax_check_compiler_flags.m4 ./m4/ax_blas.m4 ./m4/ax_cxx_maxopt.m4 ./m4/ltoptions.m4 ./m4/ax_cxx_compile_stdcxx.m4 ./m4/ltversion.m4 ./m4/ax_openmp.m4 ./m4/ax_lapack.m4 ./m4/ltsugar.m4 ./m4/libtool.m4 ./m4/ax_compiler_vendor.m4 ./m4/ax_mpi.m4 ./stamp-h1 ./monkeytype.sqlite3 ./.clang-format ./codemeta.json ./.mailmap ./config.guess ./.gitignore ./depcomp ./LICENSE ./meep-pkgconfig.in ./Makefile ./libpympb ./libpympb/Makefile ./libpympb/Makefile.in ./libpympb/pympb.cpp ./libpympb/pympb.hpp ./libpympb/Makefile.am ./Makefile.in ./.pre-commit-config.yaml ./.travis.yml ./config.h.in ./scheme ./scheme/meep-ctl.hpp ./scheme/materials.scm ./scheme/meep-ctl-swig.hpp ./scheme/structure.cpp ./scheme/meep-ctl-const.hpp ./scheme/geom.cpp ./scheme/meep.i ./scheme/meep_op_renames.i ./scheme/meep_wrap.patch ./scheme/examples ./scheme/examples/parallel-wvgs-force.ctl ./scheme/examples/polarization_grating.ctl ./scheme/examples/binary_grating.ctl ./scheme/examples/refl-angular-kz2d.ctl ./scheme/examples/ring-cyl.ctl ./scheme/examples/solve-cw.ctl ./scheme/examples/absorbed-power-density.ctl ./scheme/examples/bend-flux.ctl ./scheme/examples/oblique-planewave.ctl ./scheme/examples/straight-waveguide.ctl ./scheme/examples/ring.ctl ./scheme/examples/mie-scattering.ctl ./scheme/examples/zone-plate.ctl ./scheme/examples/perturbation-theory-2d.ctl ./scheme/examples/cherenkov-radiation.ctl ./scheme/examples/differential-cross-section.ctl ./scheme/examples/parallel-wvgs-mpb.ctl ./scheme/examples/holey-wvg-bands.ctl ./scheme/examples/3rd-harm-1d.ctl ./scheme/examples/perturbation-theory.ctl ./scheme/examples/refl-angular.ctl ./scheme/examples/wvg_src.ctl ./scheme/examples/binary_grating_oblique.ctl ./scheme/examples/metasurface_lens_phasemap.ctl ./scheme/examples/cylinder-cross-section.ctl ./scheme/examples/mode-coeffs.ctl ./scheme/examples/holey-wvg-cavity.ctl ./scheme/examples/group-velocity.ctl ./scheme/examples/mode-decomposition.ctl ./scheme/examples/bent-waveguide.ctl ./scheme/examples/binary_grating_phasemap.ctl ./scheme/examples/chirped-pulse.ctl ./scheme/examples/pw-source.ctl ./scheme/examples/oblique-source.ctl ./scheme/examples/metal-cavity-ldos.ctl ./scheme/examples/faraday-rotation.ctl ./scheme/examples/metasurface_lens_farfield.ctl ./scheme/examples/material-dispersion.ctl ./scheme/examples/gaussian-beam.ctl ./scheme/examples/antenna-radiation.ctl ./scheme/examples/finite_grating.ctl ./scheme/examples/refl-quartz.ctl ./scheme/examples/multilevel-atom.ctl ./scheme/examples/binary_grating_n2f.ctl ./scheme/examples/stochastic-emitter.ctl ./scheme/examples/cavity-farfield.ctl ./scheme/meep-geom.o ./scheme/meep_enum_renames.i ./scheme/meep_swig_bug_workaround.i ./scheme/meep-main.o ./scheme/meep_wrap.cxx ./scheme/meep-meep.o ./scheme/ctl-io.h ./scheme/meep_wrap.cxx.bak ./scheme/Makefile ./scheme/Makefile.in ./scheme/ctl-io.i ./scheme/meep-enums.scm ./scheme/meep_wrap.cxx.orig ./scheme/meep_renames.i ./scheme/casimir.scm ./scheme/Makefile.am ./scheme/meep.cpp ./scheme/ctl-io.cpp ./scheme/meep-structure.o ./scheme/main.cpp ./scheme/meep.scm.in ./scheme/.libs ./scheme/.libs/meep ./scheme/meep-ctl-io.o ./scheme/meep.scm ./scheme/meep-meep_wrap.o ./scheme/meep ./ltmain.sh ./config.log ./.github ./.github/dependabot.yml ./.github/workflows ./.github/workflows/pre-commit.yml ./.github/workflows/build-san.yml ./.github/workflows/build-ci.yml ./meep.pc ./test-driver ./debian ./debian/copyright ./debian/libmeep-openmpi30.install ./debian/python3-meep-openmpi.prerm ./debian/python3-meep-openmpi.debhelper.log ./debian/libmeep-openmpi-dev.install ./debian/libmeep-openmpi-dev.debhelper.log ./debian/.debhelper ./debian/.debhelper/generated ./debian/.debhelper/generated/meep-openmpi ./debian/.debhelper/generated/meep-openmpi/dh_installchangelogs.dch.trimmed ./debian/.debhelper/generated/python3-meep-openmpi ./debian/.debhelper/generated/python3-meep-openmpi/dh_installchangelogs.dch.trimmed ./debian/.debhelper/generated/_source ./debian/.debhelper/generated/_source/home ./debian/.debhelper/generated/_source/home/.cache ./debian/.debhelper/generated/_source/home/.cache/guile ./debian/.debhelper/generated/_source/home/.cache/guile/ccache ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6 ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl/base ./debian/.debhelper/generated/_source/home/.cache/guile/ccache/3.0-LE-8-4.6/usr/share/libctl/base/include.scm.go ./debian/.debhelper/generated/libmeep-openmpi30 ./debian/.debhelper/generated/libmeep-openmpi30/dh_installchangelogs.dch.trimmed ./debian/.debhelper/generated/libmeep-openmpi-dev ./debian/.debhelper/generated/libmeep-openmpi-dev/dh_installchangelogs.dch.trimmed ./debian/meep-openmpi ./debian/meep-openmpi/usr ./debian/meep-openmpi/usr/share ./debian/meep-openmpi/usr/share/doc ./debian/meep-openmpi/usr/share/doc/meep-openmpi ./debian/meep-openmpi/usr/share/doc/meep-openmpi/changelog ./debian/meep-openmpi/usr/share/doc/meep-openmpi/changelog.Debian ./debian/meep-openmpi.docs ./debian/libmeep-openmpi30.lintian-overrides ./debian/python3-meep-openmpi.postinst ./debian/autoreconf.after ./debian/docs ./debian/meep-openmpi.manpages ./debian/meep-openmpi.1 ./debian/autoreconf.before ./debian/changelog ./debian/source ./debian/source/format ./debian/source/lintian-overrides ./debian/python3-meep-openmpi ./debian/python3-meep-openmpi/usr ./debian/python3-meep-openmpi/usr/share ./debian/python3-meep-openmpi/usr/share/doc ./debian/python3-meep-openmpi/usr/share/doc/python3-meep-openmpi ./debian/python3-meep-openmpi/usr/share/doc/python3-meep-openmpi/changelog ./debian/python3-meep-openmpi/usr/share/doc/python3-meep-openmpi/changelog.Debian ./debian/debhelper-build-stamp ./debian/README.source ./debian/meep-openmpi.debhelper.log ./debian/patches ./debian/patches/i386-fix.patch ./debian/patches/series ./debian/python3-meep-openmpi.install ./debian/meep-openmpi.install ./debian/control ./debian/tmp ./debian/tmp/usr ./debian/tmp/usr/lib ./debian/tmp/usr/lib/python3.11 ./debian/tmp/usr/lib/python3.11/site-packages ./debian/tmp/usr/lib/python3.11/site-packages/meep ./debian/tmp/usr/lib/python3.11/site-packages/meep/timing_measurements.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/binary_partition_utils.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/geom.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30.0.0 ./debian/tmp/usr/lib/python3.11/site-packages/meep/verbosity_mgr.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/simulation.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/basis.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/wrapper.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/utils.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/connectivity.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__init__.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/filters.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/optimization_problem.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/filter_source.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__ ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/connectivity.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/__init__.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/basis.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filters.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/objective.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/basis.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/wrapper.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/utils.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/wrapper.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/optimization_problem.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/utils.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filter_source.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filters.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/objective.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/filter_source.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/__init__.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/__pycache__/connectivity.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/adjoint/objective.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/visualization.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/chunk_balancer.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so ./debian/tmp/usr/lib/python3.11/site-packages/meep/materials.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.a ./debian/tmp/usr/lib/python3.11/site-packages/meep/__init__.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.la ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__ ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/chunk_balancer.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/timing_measurements.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/__init__.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/binary_partition_utils.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/verbosity_mgr.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/geom.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/verbosity_mgr.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/binary_partition_utils.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/source.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/source.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/simulation.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/materials.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/simulation.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/geom.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/visualization.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/__init__.cpython-311.opt-1.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/timing_measurements.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/chunk_balancer.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/visualization.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/__pycache__/materials.cpython-311.pyc ./debian/tmp/usr/lib/python3.11/site-packages/meep/source.py ./debian/tmp/usr/lib/python3.11/site-packages/meep/_meep.so.30 ./debian/tmp/usr/lib/x86_64-linux-gnu ./debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a ./debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.so.30.0.0 ./debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.so ./debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig ./debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/meep.pc ./debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.so.30 ./debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.la ./debian/tmp/usr/bin ./debian/tmp/usr/bin/meep ./debian/tmp/usr/share ./debian/tmp/usr/share/meep ./debian/tmp/usr/share/meep/materials.scm ./debian/tmp/usr/share/meep/meep-enums.scm ./debian/tmp/usr/share/meep/casimir.scm ./debian/tmp/usr/share/meep/meep.scm ./debian/tmp/usr/include ./debian/tmp/usr/include/meep.hpp ./debian/tmp/usr/include/meep ./debian/tmp/usr/include/meep/adjust_verbosity.hpp ./debian/tmp/usr/include/meep/mympi.hpp ./debian/tmp/usr/include/meep/meep-config.h ./debian/tmp/usr/include/meep/material_data.hpp ./debian/tmp/usr/include/meep/meepgeom.hpp ./debian/tmp/usr/include/meep/vec.hpp ./debian/watch ./debian/libmeep-openmpi30.debhelper.log ./debian/libmeep-openmpi30 ./debian/libmeep-openmpi30/usr ./debian/libmeep-openmpi30/usr/share ./debian/libmeep-openmpi30/usr/share/doc ./debian/libmeep-openmpi30/usr/share/doc/libmeep-openmpi30 ./debian/libmeep-openmpi30/usr/share/doc/libmeep-openmpi30/changelog ./debian/libmeep-openmpi30/usr/share/doc/libmeep-openmpi30/changelog.Debian ./debian/libmeep-openmpi-dev ./debian/libmeep-openmpi-dev/usr ./debian/libmeep-openmpi-dev/usr/share ./debian/libmeep-openmpi-dev/usr/share/doc ./debian/libmeep-openmpi-dev/usr/share/doc/libmeep-openmpi-dev ./debian/libmeep-openmpi-dev/usr/share/doc/libmeep-openmpi-dev/changelog ./debian/libmeep-openmpi-dev/usr/share/doc/libmeep-openmpi-dev/changelog.Debian ./debian/not-installed ./debian/rules ./contrib ./contrib/build-meep.sh ./TODO ./aclocal.m4 ./index.md ./python ./python/timing_measurements.py ./python/binary_partition_utils.py ./python/meep.i ./python/vec.i ./python/_meep_la-meep-python.o ./python/geom.py ./python/meep-python.hpp ./python/_meep_la-meep-python.lo ./python/examples ./python/examples/wvg-src.py ./python/examples/mie_scattering.ipynb ./python/examples/mode-decomposition.ipynb ./python/examples/oblique-source.py ./python/examples/3rd-harm-1d.ipynb ./python/examples/finite_grating.ipynb ./python/examples/stochastic_emitter.py ./python/examples/eps_fit_lorentzian.py ./python/examples/planar_cavity_ldos.py ./python/examples/antenna-radiation.py ./python/examples/metal-cavity-ldos.py ./python/examples/antenna-radiation.ipynb ./python/examples/bent-waveguide.ipynb ./python/examples/binary_grating_oblique.py ./python/examples/multilevel-atom.py ./python/examples/faraday-rotation.py ./python/examples/straight-waveguide.ipynb ./python/examples/pw-source.py ./python/examples/bent-waveguide.py ./python/examples/bend-flux.py ./python/examples/mode-decomposition.py ./python/examples/binary_grating_phasemap.py ./python/examples/cavity_arrayslice.py ./python/examples/stochastic_emitter_line.py ./python/examples/straight-waveguide.py ./python/examples/cherenkov-radiation.py ./python/examples/parallel-wvgs-force.ipynb ./python/examples/perturbation_theory.ipynb ./python/examples/oblique-source.ipynb ./python/examples/metal-cavity-ldos.ipynb ./python/examples/perturbation_theory.py ./python/examples/mpb_bragg_sine.py ./python/examples/cylinder_cross_section.py ./python/examples/absorbed_power_density.ipynb ./python/examples/bend-flux.ipynb ./python/examples/parallel-wvgs-mpb.py ./python/examples/refl-angular.ipynb ./python/examples/chirped_pulse.py ./python/examples/mpb_honey_rods.py ./python/examples/coupler.gds ./python/examples/finite_grating.py ./python/examples/stochastic_emitter.ipynb ./python/examples/zone_plate.ipynb ./python/examples/stochastic_emitter_reciprocity.py ./python/examples/extraction_eff_ldos.py ./python/examples/holey-wvg-cavity.ipynb ./python/examples/refl-quartz.ipynb ./python/examples/ring-cyl.py ./python/examples/metasurface_lens.ipynb ./python/examples/ring_gds.py ./python/examples/parallel-wvgs-force.py ./python/examples/differential_cross_section.ipynb ./python/examples/solve-cw.py ./python/examples/coupler.ipynb ./python/examples/mie_scattering.py ./python/examples/antenna_pec_ground_plane.py ./python/examples/cavity-farfield.py ./python/examples/binary_grating_n2f.py ./python/examples/absorbed_power_density.py ./python/examples/mpb_tri_holes.py ./python/examples/mpb_tutorial.py ./python/examples/diffracted_planewave.py ./python/examples/mpb_bragg.py ./python/examples/ring.py ./python/examples/cylinder_cross_section.ipynb ./python/examples/grating2d_triangular_lattice.py ./python/examples/mpb_strip.py ./python/examples/refl-angular.py ./python/examples/adjoint_optimization ./python/examples/adjoint_optimization/Fourier-Bend.ipynb ./python/examples/adjoint_optimization/02-Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/06-Near2Far-Epigraph.ipynb ./python/examples/adjoint_optimization/05-Near2Far.ipynb ./python/examples/adjoint_optimization/Bend Minimax.ipynb ./python/examples/adjoint_optimization/04-Splitter.ipynb ./python/examples/adjoint_optimization/Fourier-Metalens.ipynb ./python/examples/adjoint_optimization/03-Filtered_Waveguide_Bend.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints ./python/examples/adjoint_optimization/.ipynb_checkpoints/06-Near2Far-Epigraph-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/04-Splitter-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/02-Waveguide_Bend-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/05-Near2Far-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/Bend Minimax-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/03-Filtered_Waveguide_Bend-checkpoint.ipynb ./python/examples/adjoint_optimization/.ipynb_checkpoints/01-Introduction-checkpoint.ipynb ./python/examples/adjoint_optimization/01-Introduction.ipynb ./python/examples/polarization_grating.py ./python/examples/mpb_diamond.py ./python/examples/coupler.py ./python/examples/ring.ipynb ./python/examples/absorber-1d.py ./python/examples/solve-cw.ipynb ./python/examples/oblique-planewave.py ./python/examples/holey-wvg-cavity.py ./python/examples/refl-quartz.py ./python/examples/binary_grating_oblique.ipynb ./python/examples/mpb_hole_slab.py ./python/examples/mpb_sq_rods.py ./python/examples/media ./python/examples/media/oblique-source-normal.mp4 ./python/examples/media/visualization_normalize.mp4 ./python/examples/media/straight_waveguide.mp4 ./python/examples/media/oblique-source-eig.mp4 ./python/examples/media/bent_waveguide.mp4 ./python/examples/media/ring_large.mp4 ./python/examples/media/ring_mid.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.1896.mp4 ./python/examples/media/holey-wvg-bands-0.1-0.4811.mp4 ./python/examples/media/visualization_demo.gif ./python/examples/media/ring_simple.mp4 ./python/examples/media/holey-wvg-bands-0.4-0.3175.mp4 ./python/examples/media/visualization_demo.mp4 ./python/examples/media/hole-wvg-cavity.mp4 ./python/examples/media/holey-wvg-bands-0.25-0.2506.mp4 ./python/examples/media/hole-wvg-cavity-res.mp4 ./python/examples/media/visualization_out_plane.mp4 ./python/examples/media/holey-wvg-bands-0.3-0.8838.mp4 ./python/examples/mpb_tri_rods.py ./python/examples/cavity-farfield.ipynb ./python/examples/differential_cross_section.py ./python/examples/holey-wvg-bands.ipynb ./python/examples/mpb_data_analysis.py ./python/examples/phase_in_material.py ./python/examples/3rd-harm-1d.py ./python/examples/polarization_grating.ipynb ./python/examples/gaussian-beam.py ./python/examples/refl-angular-kz2d.py ./python/examples/oblique-planewave.ipynb ./python/examples/binary_grating_n2f.ipynb ./python/examples/metasurface_lens.py ./python/examples/ring-mode-overlap.py ./python/examples/binary_grating.py ./python/examples/material-dispersion.py ./python/examples/binary_grating_phasemap.ipynb ./python/examples/mpb_line_defect.py ./python/examples/binary_grating.ipynb ./python/examples/perturbation_theory_2d.py ./python/examples/README.md ./python/examples/holey-wvg-bands.py ./python/examples/zone_plate.py ./python/examples/cyl-ellipsoid.py ./python/meep.py ./python/requirements.txt ./python/verbosity_mgr.py ./python/simulation.py ./python/adjoint ./python/adjoint/basis.py ./python/adjoint/wrapper.py ./python/adjoint/utils.py ./python/adjoint/connectivity.py ./python/adjoint/__init__.py ./python/adjoint/filters.py ./python/adjoint/optimization_problem.py ./python/adjoint/filter_source.py ./python/adjoint/objective.py ./python/visualization.py ./python/Makefile ./python/chunk_balancer.py ./python/Makefile.in ./python/materials.py ./python/mpb_data.py ./python/solver.py ./python/mpb.i ./python/tests ./python/tests/test_mpb.py ./python/tests/test_geom.trs ./python/tests/test_ring_cyl.py ./python/tests/test_cyl_ellipsoid.py ./python/tests/test_cavity_arrayslice.py ./python/tests/test_adjoint_cyl.trs ./python/tests/test_oblique_source.log ./python/tests/test_ldos.log ./python/tests/test_field_functions.trs ./python/tests/test_refl_angular.py ./python/tests/test_adjoint_cyl.log ./python/tests/test_force.log ./python/tests/test_visualization.log ./python/tests/test_get_point.py ./python/tests/test_chunk_balancer.py ./python/tests/test_eigfreq.trs ./python/tests/test_holey_wvg_bands.log ./python/tests/test_n2f_periodic.trs ./python/tests/test_force.trs ./python/tests/test_special_kz.trs ./python/tests/test_adjoint_utils.log ./python/tests/test_cavity_arrayslice.log ./python/tests/test_divide_mpi_processes.log ./python/tests/test_faraday_rotation.log ./python/tests/test_get_point.log ./python/tests/test_conductivity.py ./python/tests/test_fragment_stats.trs ./python/tests/test_medium_evaluations.log ./python/tests/test_cavity_farfield.trs ./python/tests/test_pw_source.trs ./python/tests/test_medium_evaluations.py ./python/tests/test_medium_evaluations.trs ./python/tests/test_multilevel_atom.py ./python/tests/test_integrated_source.py ./python/tests/test_antenna_radiation.log ./python/tests/test_materials_library.trs ./python/tests/test_adjoint_jax.trs ./python/tests/test_chunk_layout.trs ./python/tests/test_adjoint_utils.py ./python/tests/test_chunks.log ./python/tests/test_chunks.py ./python/tests/test_timing_measurements.py ./python/tests/test_user_defined_material.py ./python/tests/test_dft_energy.log ./python/tests/test_mode_decomposition.py ./python/tests/test_bend_flux.py ./python/tests/test_cyl_ellipsoid.trs ./python/tests/test_dft_fields.log ./python/tests/test_cavity_arrayslice.trs ./python/tests/test_ldos.py ./python/tests/test_3rd_harm_1d.log ./python/tests/test_material_grid.py ./python/tests/test_user_defined_material.trs ./python/tests/test_material_grid.log ./python/tests/test_mode_coeffs.py ./python/tests/test_ring_cyl.log ./python/tests/test_conductivity.log ./python/tests/test_binary_partition_utils.py ./python/tests/test_source.trs ./python/tests/test_diffracted_planewave.py ./python/tests/test_integrated_source.trs ./python/tests/test_faraday_rotation.trs ./python/tests/data ./python/tests/data/tutorial-d.k16.b08.te.h5 ./python/tests/data/diamond-dpwr.k06.b05.h5 ./python/tests/data/cavity_arrayslice_1d.npy ./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 ./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 ./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b02.te.h5 ./python/tests/data/nonconvex_prism_vertices3.npz ./python/tests/data/cavity-farfield.h5 ./python/tests/data/tutorial-te-eigenvectors-3-3.h5 ./python/tests/data/tutorial-b.k16.b08.te.h5 ./python/tests/data/cavity-farfield-4-freqs.h5 ./python/tests/data/tutorial-te-eigenvectors-8-1.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 ./python/tests/data/subpixel_avg-epsilon.h5 ./python/tests/data/tutorial-h.k16.b08.te.h5 ./python/tests/data/tutorial-epsilon.h5 ./python/tests/data/bragg-h.k01.b08.y.tm.h5 ./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 ./python/tests/data/spiral.gds ./python/tests/data/tutorial-e.k16.b08.te.h5 ./python/tests/data/tutorial-e.k16.b08.z.tm.h5 ./python/tests/data/tutorial-mu.h5 ./python/tests/data/tutorial-C.k16.b08.te.h5 ./python/tests/data/converted-diamond-dpwr.k06.b05.h5 ./python/tests/data/tutorial-flux.v.k11.b08.te.h5 ./python/tests/data/strip-flux.v.k01.b04.x.h5 ./python/tests/data/eps_input_file_test.h5 ./python/tests/data/tutorial-te-eigenvectors.h5 ./python/tests/data/convex_prism_vertices.npz ./python/tests/data/nonconvex_prism_vertices2.npz ./python/tests/data/amp_func_file.h5 ./python/tests/data/nonconvex_prism_vertices1.npz ./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 ./python/tests/data/cavity_arrayslice_2d.npy ./python/tests/data/tutorial-d.k01.b02.te.h5 ./python/tests/data/bend-flux.gds ./python/tests/data/line-defect-e.k04.b12.z.tm.h5 ./python/tests/test_cavity_farfield.py ./python/tests/test_source.py ./python/tests/test_bend_flux.log ./python/tests/test_refl_angular.log ./python/tests/test_chunk_balancer.log ./python/tests/test_prism.trs ./python/tests/test_fragment_stats.py ./python/tests/test_force.py ./python/tests/test_timing_measurements.trs ./python/tests/test_holey_wvg_bands.py ./python/tests/test_field_functions.log ./python/tests/test_dft_energy.py ./python/tests/test_get_epsilon_grid.log ./python/tests/test_ring.trs ./python/tests/test_multilevel_atom.log ./python/tests/test_array_metadata.log ./python/tests/test_absorber_1d.trs ./python/tests/test_physical.py ./python/tests/test_simulation.trs ./python/tests/test_antenna_radiation.trs ./python/tests/test_physical.log ./python/tests/test_holey_wvg_bands.trs ./python/tests/test_adjoint_cyl.py ./python/tests/test_chunk_layout.py ./python/tests/test_holey_wvg_cavity.log ./python/tests/test_special_kz.py ./python/tests/test_ring.py ./python/tests/test_adjoint_utils.trs ./python/tests/test_physical.trs ./python/tests/test_oblique_source.py ./python/tests/test_fragment_stats.log ./python/tests/test_gaussianbeam.log ./python/tests/test_cyl_ellipsoid.log ./python/tests/test_array_metadata.trs ./python/tests/test_n2f_periodic.log ./python/tests/utils.py ./python/tests/test_geom.py ./python/tests/test_bend_flux.trs ./python/tests/test_material_dispersion.py ./python/tests/test_prism.py ./python/tests/test_holey_wvg_cavity.py ./python/tests/test_kdom.py ./python/tests/test_prism.log ./python/tests/test_cavity_farfield.log ./python/tests/test_faraday_rotation.py ./python/tests/test_refl_angular.trs ./python/tests/test_dft_fields.py ./python/tests/test_dft_energy.trs ./python/tests/test_adjoint_solver.trs ./python/tests/test_absorber_1d.log ./python/tests/test_adjoint_solver.log ./python/tests/test_array_metadata.py ./python/tests/test_chunks.trs ./python/tests/test_3rd_harm_1d.py ./python/tests/test_adjoint_jax.log ./python/tests/test_eigfreq.py ./python/tests/test_adjoint_jax.py ./python/tests/test_3rd_harm_1d.trs ./python/tests/test_divide_mpi_processes.trs ./python/tests/test_absorber_1d.py ./python/tests/test_dft_fields.trs ./python/tests/test_get_epsilon_grid.py ./python/tests/test_dump_load.trs ./python/tests/test_gaussianbeam.trs ./python/tests/test_materials_library.py ./python/tests/test_get_epsilon_grid.trs ./python/tests/test_visualization.trs ./python/tests/test_dump_load.log ./python/tests/test_materials_library.log ./python/tests/test_integrated_source.log ./python/tests/test_simulation.log ./python/tests/test_timing_measurements.log ./python/tests/test_material_grid.trs ./python/tests/test_antenna_radiation.py ./python/tests/test_special_kz.log ./python/tests/test_simulation.py ./python/tests/test_binary_partition_utils.trs ./python/tests/test_ldos.trs ./python/tests/test_adjoint_solver.py ./python/tests/test_ring_cyl.trs ./python/tests/test_pw_source.py ./python/tests/test_conductivity.trs ./python/tests/test_source.log ./python/tests/test_geom.log ./python/tests/test_verbosity_mgr.py ./python/tests/test_wvg_src.py ./python/tests/test_field_functions.py ./python/tests/test_chunk_layout.log ./python/tests/test_n2f_periodic.py ./python/tests/test_holey_wvg_cavity.trs ./python/tests/test_dispersive_eigenmode.py ./python/tests/test_eigfreq.log ./python/tests/__pycache__ ./python/tests/__pycache__/utils.cpython-311.pyc ./python/tests/test_gaussianbeam.py ./python/tests/test_binary_grating.py ./python/tests/test_visualization.py ./python/tests/test_oblique_source.trs ./python/tests/test_pw_source.log ./python/tests/test_divide_mpi_processes.py ./python/tests/test_multilevel_atom.trs ./python/tests/test_get_point.trs ./python/tests/test_user_defined_material.log ./python/tests/test_dump_load.py ./python/tests/test_binary_partition_utils.log ./python/tests/test_ring.log ./python/tests/test_chunk_balancer.trs ./python/Makefile.am ./python/meep-python.cxx ./python/typemap_utils.cpp ./python/__init__.py ./python/numpy.i ./python/.libs ./python/.libs/_meep.so.30.0.0T ./python/.libs/_meep_la-meep-python.o ./python/.libs/_meep.so.30.0.0 ./python/.libs/_meep.so ./python/.libs/_meep.lai ./python/.libs/_meep.a ./python/.libs/_meep.la ./python/.libs/_meep.so.30 ./python/_meep.la ./python/test-suite.log ./python/source.py ./python/meep ./python/meep/timing_measurements.py ./python/meep/binary_partition_utils.py ./python/meep/geom.py ./python/meep/verbosity_mgr.py ./python/meep/simulation.py ./python/meep/adjoint ./python/meep/adjoint/basis.py ./python/meep/adjoint/wrapper.py ./python/meep/adjoint/utils.py ./python/meep/adjoint/connectivity.py ./python/meep/adjoint/__init__.py ./python/meep/adjoint/filters.py ./python/meep/adjoint/optimization_problem.py ./python/meep/adjoint/filter_source.py ./python/meep/adjoint/objective.py ./python/meep/visualization.py ./python/meep/chunk_balancer.py ./python/meep/_meep.so 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./add_type_hints.xonsh ./meep-pkgconfig ./missing ./config.status ./COPYRIGHT ./mkdocs.yml ./.pc ./.pc/i386-fix.patch ./.pc/i386-fix.patch/src ./.pc/i386-fix.patch/src/mympi.cpp ./.pc/.quilt_patches ./.pc/applied-patches ./.pc/.version ./.pc/.quilt_series ./README.md rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.a rm -f debian/tmp/usr/lib/python*/site-packages/meep/*.la rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyc rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyo rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.a rm -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.la rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/__pycache__/ rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/adjoint/__pycache__/ make[1]: Leaving directory '/build/reproducible-path/meep-openmpi-1.25.0' dh_install dh_installdocs dh_installchangelogs dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/python3-meep-openmpi/usr/lib/python3/dist-packages/meep/_meep.so.30.0.0 contains an unresolvable reference to symbol PyFloat_AsDouble: it's probably a plugin dpkg-shlibdeps: warning: 106 other similar warnings have been skipped (use -v to see them all) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'meep-openmpi-dbgsym' in '../meep-openmpi-dbgsym_1.25.0-2_amd64.deb'. dpkg-deb: building package 'meep-openmpi' in '../meep-openmpi_1.25.0-2_amd64.deb'. dpkg-deb: building package 'libmeep-openmpi30-dbgsym' in '../libmeep-openmpi30-dbgsym_1.25.0-2_amd64.deb'. dpkg-deb: building package 'libmeep-openmpi-dev' in '../libmeep-openmpi-dev_1.25.0-2_amd64.deb'. dpkg-deb: building package 'python3-meep-openmpi-dbgsym' in '../python3-meep-openmpi-dbgsym_1.25.0-2_amd64.deb'. dpkg-deb: building package 'libmeep-openmpi30' in '../libmeep-openmpi30_1.25.0-2_amd64.deb'. dpkg-deb: building package 'python3-meep-openmpi' in '../python3-meep-openmpi_1.25.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../meep-openmpi_1.25.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../meep-openmpi_1.25.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1873168/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1873168 and its subdirectories I: Current time: Wed May 8 04:49:38 +14 2024 I: pbuilder-time-stamp: 1715093378