W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build I: Current time: Sat Aug 2 18:45:12 -12 2025 I: pbuilder-time-stamp: 1754203512 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/experimental-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [heudiconv_1.1.1-1.dsc] I: copying [./heudiconv_1.1.1.orig.tar.gz] I: copying [./heudiconv_1.1.1-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri May 10 11:00:02 2024 gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A gpgv: issuer "tchet@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./heudiconv_1.1.1-1.dsc: no acceptable signature found dpkg-source: info: extracting heudiconv in heudiconv-1.1.1 dpkg-source: info: unpacking heudiconv_1.1.1.orig.tar.gz dpkg-source: info: unpacking heudiconv_1.1.1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb-no-demand-on-etelemetry I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2648022/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='experimental' HOME='/root' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2648022' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jZN76gO0/pbuilderrc_iZSy --distribution experimental --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jZN76gO0/b1 --logfile b1/build.log heudiconv_1.1.1-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/sbin/chroot' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-22-cloud-arm64 #1 SMP Debian 6.1.94-1 (2024-06-21) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2648022/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-datalad, python3-filelock, python3-setuptools, python3-pytest, python3-nipype, dcm2niix, help2man, python3-dcmstack, python3-tinydb, python3-inotify, python3-duecredit, python3-dicom dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19802 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-datalad; however: Package python3-datalad is not installed. pbuilder-satisfydepends-dummy depends on python3-filelock; however: Package python3-filelock is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-nipype; however: Package python3-nipype is not installed. pbuilder-satisfydepends-dummy depends on dcm2niix; however: Package dcm2niix is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on python3-dcmstack; however: Package python3-dcmstack is not installed. pbuilder-satisfydepends-dummy depends on python3-tinydb; however: Package python3-tinydb is not installed. pbuilder-satisfydepends-dummy depends on python3-inotify; however: Package python3-inotify is not installed. pbuilder-satisfydepends-dummy depends on python3-duecredit; however: Package python3-duecredit is not installed. pbuilder-satisfydepends-dummy depends on python3-dicom; however: Package python3-dicom is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: 7zip{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} curl{a} dcm2niix{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} git{a} git-annex{a} git-man{a} groff-base{a} help2man{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcbor0.10{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} liberror-perl{a} libexpat1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} liblocale-gettext-perl{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libopenjp2-7{a} libpipeline1{a} libpopt0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtool{a} libturbojpeg0{a} libuchardet0{a} libxml2{a} libxslt1.1{a} libyaml-0-2{a} libyaml-cpp0.8{a} lsb-release{a} m4{a} man-db{a} media-types{a} netbase{a} openssh-client{a} openssl{a} patool{a} po-debconf{a} python3{a} python3-all{a} python3-annexremote{a} python3-appdirs{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-ci-info{a} python3-citeproc{a} python3-click{a} python3-colorama{a} python3-cryptography{a} python3-datalad{a} python3-dateutil{a} python3-dcmstack{a} python3-decorator{a} python3-deepdiff{a} python3-dipy{a} python3-dipy-lib{a} python3-distro{a} python3-distutils{a} python3-duecredit{a} python3-etelemetry{a} python3-fasteners{a} python3-filelock{a} python3-funcsigs{a} python3-gitlab{a} python3-h5py{a} python3-h5py-serial{a} python3-humanize{a} python3-idna{a} python3-importlib-metadata{a} python3-iniconfig{a} python3-inotify{a} python3-iso8601{a} python3-isodate{a} python3-jaraco.classes{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jeepney{a} python3-jsonpickle{a} python3-keyring{a} python3-keyrings.alt{a} python3-lib2to3{a} python3-lxml{a} python3-minimal{a} python3-monotonic{a} python3-more-itertools{a} python3-msgpack{a} python3-networkx{a} python3-nibabel{a} python3-nipype{a} python3-numpy{a} python3-ordered-set{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-pluggy{a} python3-prov{a} python3-psutil{a} python3-pycryptodome{a} python3-pydicom{a} python3-pyparsing{a} python3-pytest{a} python3-rdflib{a} python3-requests{a} python3-requests-toolbelt{a} python3-scipy{a} python3-secretstorage{a} python3-setuptools{a} python3-setuptools-scm{a} python3-simplejson{a} python3-six{a} python3-tinydb{a} python3-tqdm{a} python3-traits{a} python3-trx-python{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-zipp{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} rsync{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: aria2 bind9-host git-remote-gcrypt gnupg graphviz ipython3 javascript-common krb5-locales less libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lsof mayavi2 nocache pigz publicsuffix python3-boto3 python3-bottleneck python3-bs4 python3-clevercsv python3-cssselect python3-fuse python3-gdal python3-html5lib python3-httpretty python3-jinja2 python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-pydot python3-pydotplus python3-pygments python3-pygraphviz python3-pyperclip python3-sklearn python3-sparqlwrapper python3-tables python3-vcr python3-vtk9 python3-xvfbwrapper python3-yaml xauth 0 packages upgraded, 180 newly installed, 0 to remove and 0 not upgraded. Need to get 144 MB of archives. After unpacking 730 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-7 [14.8 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.4-1 [804 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.4-1 [1918 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.2-1 [26.5 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024a-4 [255 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-4 [69.3 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.4-1 [1886 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.4-1 [664 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.2-1 [9432 B] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.2-1 [27.5 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 libpython3.11-minimal arm64 3.11.9-1 [813 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 python3.11-minimal arm64 3.11.9-1 [1767 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libpopt0 arm64 1.19+dfsg-1+b1 [42.6 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 rsync arm64 3.3.0-1 [401 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.2.2-1 [1327 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-1 [197 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.1-9 [95.2 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.12.1-2 [1394 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240517-1 [88.9 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libcbor0.10 arm64 0.10.2-1.2 [27.2 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libfido2-1 arm64 1.15.0-1 [74.1 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-1 [32.0 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1 [22.8 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-1 [80.8 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get: 38 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-1 [307 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-1 [126 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 openssh-client arm64 1:9.7p1-6 [903 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 7zip arm64 24.07+dfsg-1 [1393 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-1 [723 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-6 [20.1 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-6 [55.3 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-1 [173 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.62.1-1 [71.2 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.0-5 [207 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.8.0-1 [411 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 curl arm64 8.8.0-1 [334 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libopenjp2-7 arm64 2.5.0-2+b3 [177 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libturbojpeg0 arm64 1:2.1.5-3 [210 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libyaml-cpp0.8 arm64 0.8.0+dfsg-6+b1 [119 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 dcm2niix arm64 1.0.20220720-1+b1 [221 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.16 [88.6 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 67 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg-3 [609 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-1 [1526 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.16 [891 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-distutils all 3.12.3-3.1 [131 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 68.1.2-2 [468 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20240422 [107 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.8.0-1 [405 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 liberror-perl all 0.17029-2 [29.0 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 git-man all 1:2.45.2-1 [2158 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 git arm64 1:2.45.2-1 [8513 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1+b1 [49.0 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 git-annex arm64 10.20240430-1 [16.1 MB] Get: 86 http://deb.debian.org/debian unstable/main arm64 help2man arm64 1.49.3 [198 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1 [22.1 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.1.0-2 [361 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1 [7664 B] Get: 91 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.3 [1035 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.3 [60.1 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 7.2.6-9 [150 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b1 [25.0 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b1 [10.3 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libpython3.11-stdlib arm64 3.11.9-1 [1775 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libxslt1.1 arm64 1.1.35-1+b1 [221 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 lsb-release all 12.1-1 [5912 B] Get: 102 http://deb.debian.org/debian unstable/main arm64 patool all 2.0.0-2 [39.3 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 python3.11 arm64 3.11.9-1 [602 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.12.2-1 [1060 B] Get: 105 http://deb.debian.org/debian unstable/main arm64 python3-annexremote all 1.6.4-2 [15.9 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2024.6.2-1 [157 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 python3-cffi-backend arm64 1.16.0-2+b2 [109 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 python3-ci-info all 0.3.0-1 [7584 B] Get: 112 http://deb.debian.org/debian unstable/main arm64 python3-lxml arm64 5.2.1-1 [1767 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 python3-citeproc all 0.6.0-3 [96.7 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-1 [72.9 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.19.2-2 [10.2 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 python3-importlib-metadata all 8.0.0-1 [19.4 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 python3-click all 8.1.7-1 [94.0 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 python3-cryptography arm64 42.0.5-2 [1050 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 python3-distro all 1.9.0-1 [20.3 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 python3-monotonic all 1.6-2 [5728 B] Get: 122 http://deb.debian.org/debian unstable/main arm64 python3-fasteners all 0.18-2 [14.0 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.6-2.1 [38.6 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 python3-requests-toolbelt all 1.0.0-2 [40.0 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 python3-gitlab all 1:4.3.0-1 [72.8 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 python3-humanize all 4.9.0-1 [52.0 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 python3-iso8601 all 1.0.2-1 [15.7 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 4.3.0-1 [7616 B] Get: 131 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.3.0-1 [62.0 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.0.0-1 [10.6 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 python3-jeepney all 0.8.0-3 [34.0 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 python3-secretstorage all 3.3.3-3 [16.1 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.classes all 3.2.1-4 [7232 B] Get: 136 http://deb.debian.org/debian unstable/main arm64 python3-keyring all 25.2.1-1 [53.7 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 python3-pycryptodome arm64 3.20.0+dfsg-1 [1070 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 python3-keyrings.alt all 5.0.1-1 [17.5 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 python3-msgpack arm64 1.0.3-3+b1 [87.4 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 python3-tqdm all 4.66.4-1 [90.8 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.0-1 [45.5 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 python3-datalad all 1.1.0-1 [888 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 python3-six all 1.16.0-6 [16.3 kB] Get: 144 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 python3-pydicom all 2.4.3-1 [1120 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:1.26.4+ds-10 [4221 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.12.0-2 [18.8 MB] Get: 149 http://deb.debian.org/debian unstable/main arm64 python3-nibabel all 5.2.1-2 [2659 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 python3-dcmstack all 0.9-3 [78.2 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 python3-jsonpickle all 3.2.2+dfsg-1 [43.4 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 python3-ordered-set all 4.1.0-1 [9628 B] Get: 153 http://deb.debian.org/debian unstable/main arm64 python3-deepdiff all 6.7.1-2 [65.6 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.11.0-2 [1441 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.11.0-2 [14.5 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 python3-trx-python all 0.2.9-1 [40.2 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 python3-tz all 2024.1-2 [30.9 kB] Get: 159 http://deb.debian.org/debian unstable/main arm64 python3-pandas-lib arm64 2.1.4+dfsg-8 [6609 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 python3-pandas all 2.1.4+dfsg-8 [3015 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 python3-dipy-lib arm64 1.9.0-5 [3376 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 python3-dipy all 1.9.0-5 [3474 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 python3-duecredit all 0.9.1-1.1 [66.7 kB] Get: 164 http://deb.debian.org/debian unstable/main arm64 python3-etelemetry all 0.3.1-1 [7244 B] Get: 165 http://deb.debian.org/debian unstable/main arm64 python3-filelock all 3.15.4-1 [12.6 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 python3-funcsigs all 1.0.2-5 [14.0 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 168 http://deb.debian.org/debian unstable/main arm64 python3-inotify all 0.2.10-5 [10.5 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 python3-isodate all 0.6.1-2 [24.9 kB] Get: 170 http://deb.debian.org/debian unstable/main arm64 python3-networkx all 3.2.1-4 [14.2 MB] Get: 171 http://deb.debian.org/debian unstable/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 python3-rdflib all 7.0.0-1 [444 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 python3-prov all 2.0.1-1 [95.1 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 python3-simplejson arm64 3.19.2-1+b1 [66.7 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 python3-traits arm64 6.4.3-1 [4821 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 python3-psutil arm64 5.9.8-2 [225 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 python3-nipype all 1.8.6-3 [1849 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.2.2-2 [248 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 python3-tinydb all 3.15.2-4 [20.8 kB] Fetched 144 MB in 1s (172 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19802 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package libpython3.12-minimal:arm64. Preparing to unpack .../libpython3.12-minimal_3.12.4-1_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.4-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.2-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.4-1_arm64.deb ... Unpacking python3.12-minimal (3.12.4-1) ... Setting up libpython3.12-minimal:arm64 (3.12.4-1) ... Setting up libexpat1:arm64 (2.6.2-1) ... Setting up python3.12-minimal (3.12.4-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20136 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.12.2-1_arm64.deb ... Unpacking python3-minimal (3.12.2-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../5-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package libpython3.12-stdlib:arm64. Preparing to unpack .../6-libpython3.12-stdlib_3.12.4-1_arm64.deb ... Unpacking libpython3.12-stdlib:arm64 (3.12.4-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../7-python3.12_3.12.4-1_arm64.deb ... Unpacking python3.12 (3.12.4-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../8-libpython3-stdlib_3.12.2-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.12.2-1) ... Setting up python3-minimal (3.12.2-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21138 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.2-1_arm64.deb ... Unpacking python3 (3.12.2-1) ... Selecting previously unselected package libpython3.11-minimal:arm64. Preparing to unpack .../001-libpython3.11-minimal_3.11.9-1_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.9-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../002-python3.11-minimal_3.11.9-1_arm64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Selecting previously unselected package libpopt0:arm64. Preparing to unpack .../003-libpopt0_1.19+dfsg-1+b1_arm64.deb ... Unpacking libpopt0:arm64 (1.19+dfsg-1+b1) ... Selecting previously unselected package rsync. Preparing to unpack .../004-rsync_3.3.0-1_arm64.deb ... Unpacking rsync (3.3.0-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../006-openssl_3.2.2-1_arm64.deb ... Unpacking openssl (3.2.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../007-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../008-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../009-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../010-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../011-gettext-base_0.22.5-1_arm64.deb ... Unpacking gettext-base (0.22.5-1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../012-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../013-groff-base_1.23.0-4_arm64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../014-bsdextrautils_2.40.1-9_arm64.deb ... Unpacking bsdextrautils (2.40.1-9) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../015-libpipeline1_1.5.7-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../016-man-db_2.12.1-2_arm64.deb ... Unpacking man-db (2.12.1-2) ... Selecting previously unselected package libedit2:arm64. Preparing to unpack .../017-libedit2_3.1-20240517-1_arm64.deb ... Unpacking libedit2:arm64 (3.1-20240517-1) ... Selecting previously unselected package libcbor0.10:arm64. Preparing to unpack .../018-libcbor0.10_0.10.2-1.2_arm64.deb ... Unpacking libcbor0.10:arm64 (0.10.2-1.2) ... Selecting previously unselected package libfido2-1:arm64. Preparing to unpack .../019-libfido2-1_1.15.0-1_arm64.deb ... Unpacking libfido2-1:arm64 (1.15.0-1) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../020-libkrb5support0_1.21.3-1_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-1) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../021-libcom-err2_1.47.1-1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../022-libk5crypto3_1.21.3-1_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-1) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../023-libkeyutils1_1.6.3-3_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../024-libkrb5-3_1.21.3-1_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-1) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../025-libgssapi-krb5-2_1.21.3-1_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../026-openssh-client_1%3a9.7p1-6_arm64.deb ... Unpacking openssh-client (1:9.7p1-6) ... Selecting previously unselected package 7zip. Preparing to unpack .../027-7zip_24.07+dfsg-1_arm64.deb ... Unpacking 7zip (24.07+dfsg-1) ... Selecting previously unselected package m4. Preparing to unpack .../028-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../029-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../030-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../031-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../032-autopoint_0.22.5-1_all.deb ... Unpacking autopoint (0.22.5-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../033-libbrotli1_1.1.0-2+b3_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../034-libsasl2-modules-db_2.1.28+dfsg1-6_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../035-libsasl2-2_2.1.28+dfsg1-6_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../036-libldap-2.5-0_2.5.18+dfsg-1_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.18+dfsg-1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../037-libnghttp2-14_1.62.1-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.62.1-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../038-libpsl5t64_0.21.2-1.1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../039-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../040-libssh2-1t64_1.11.0-5_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.0-5) ... Selecting previously unselected package libcurl4t64:arm64. Preparing to unpack .../041-libcurl4t64_8.8.0-1_arm64.deb ... Unpacking libcurl4t64:arm64 (8.8.0-1) ... Selecting previously unselected package curl. Preparing to unpack .../042-curl_8.8.0-1_arm64.deb ... Unpacking curl (8.8.0-1) ... Selecting previously unselected package libopenjp2-7:arm64. Preparing to unpack .../043-libopenjp2-7_2.5.0-2+b3_arm64.deb ... Unpacking libopenjp2-7:arm64 (2.5.0-2+b3) ... Selecting previously unselected package libturbojpeg0:arm64. Preparing to unpack .../044-libturbojpeg0_1%3a2.1.5-3_arm64.deb ... Unpacking libturbojpeg0:arm64 (1:2.1.5-3) ... Selecting previously unselected package libyaml-cpp0.8:arm64. Preparing to unpack .../045-libyaml-cpp0.8_0.8.0+dfsg-6+b1_arm64.deb ... Unpacking libyaml-cpp0.8:arm64 (0.8.0+dfsg-6+b1) ... Selecting previously unselected package dcm2niix. Preparing to unpack .../046-dcm2niix_1.0.20220720-1+b1_arm64.deb ... Unpacking dcm2niix (1.0.20220720-1+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../047-libdebhelper-perl_13.16_all.deb ... Unpacking libdebhelper-perl (13.16) ... Selecting previously unselected package libtool. Preparing to unpack .../048-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../049-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../050-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../051-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../052-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../053-libelf1t64_0.191-1+b1_arm64.deb ... Unpacking libelf1t64:arm64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../054-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../055-libicu72_72.1-4+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-4+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../056-libxml2_2.12.7+dfsg-3_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg-3) ... Selecting previously unselected package gettext. Preparing to unpack .../057-gettext_0.22.5-1_arm64.deb ... Unpacking gettext (0.22.5-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../058-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../059-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../060-debhelper_13.16_all.deb ... Unpacking debhelper (13.16) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../061-python3-pkg-resources_68.1.2-2_all.deb ... Unpacking python3-pkg-resources (68.1.2-2) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../062-python3-lib2to3_3.12.3-3.1_all.deb ... Unpacking python3-lib2to3 (3.12.3-3.1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../063-python3-distutils_3.12.3-3.1_all.deb ... Unpacking python3-distutils (3.12.3-3.1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../064-python3-setuptools_68.1.2-2_all.deb ... Unpacking python3-setuptools (68.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../065-dh-python_6.20240422_all.deb ... Unpacking dh-python (6.20240422) ... Selecting previously unselected package libcurl3t64-gnutls:arm64. Preparing to unpack .../066-libcurl3t64-gnutls_8.8.0-1_arm64.deb ... Unpacking libcurl3t64-gnutls:arm64 (8.8.0-1) ... Selecting previously unselected package liberror-perl. Preparing to unpack .../067-liberror-perl_0.17029-2_all.deb ... Unpacking liberror-perl (0.17029-2) ... Selecting previously unselected package git-man. Preparing to unpack .../068-git-man_1%3a2.45.2-1_all.deb ... Unpacking git-man (1:2.45.2-1) ... Selecting previously unselected package git. Preparing to unpack .../069-git_1%3a2.45.2-1_arm64.deb ... Unpacking git (1:2.45.2-1) ... Selecting previously unselected package libyaml-0-2:arm64. Preparing to unpack .../070-libyaml-0-2_0.2.5-1+b1_arm64.deb ... Unpacking libyaml-0-2:arm64 (0.2.5-1+b1) ... Selecting previously unselected package git-annex. Preparing to unpack .../071-git-annex_10.20240430-1_arm64.deb ... Unpacking git-annex (10.20240430-1) ... Selecting previously unselected package help2man. Preparing to unpack .../072-help2man_1.49.3_arm64.deb ... Unpacking help2man (1.49.3) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../073-libaec0_1.1.3-1_arm64.deb ... Unpacking libaec0:arm64 (1.1.3-1) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../074-libblas3_3.12.0-3_arm64.deb ... Unpacking libblas3:arm64 (3.12.0-3) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../075-libgfortran5_14.1.0-2_arm64.deb ... Unpacking libgfortran5:arm64 (14.1.0-2) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../076-libsz2_1.1.3-1_arm64.deb ... Unpacking libsz2:arm64 (1.1.3-1) ... Selecting previously unselected package libhdf5-103-1t64:arm64. Preparing to unpack .../077-libhdf5-103-1t64_1.10.10+repack-3.3_arm64.deb ... Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-3.3) ... Selecting previously unselected package libhdf5-hl-100t64:arm64. Preparing to unpack .../078-libhdf5-hl-100t64_1.10.10+repack-3.3_arm64.deb ... Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-3.3) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../079-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../080-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../081-libjs-sphinxdoc_7.2.6-9_all.deb ... Unpacking libjs-sphinxdoc (7.2.6-9) ... Selecting previously unselected package liblapack3:arm64. Preparing to unpack .../082-liblapack3_3.12.0-3_arm64.deb ... Unpacking liblapack3:arm64 (3.12.0-3) ... Selecting previously unselected package liblbfgsb0:arm64. Preparing to unpack .../083-liblbfgsb0_3.0+dfsg.4-1+b1_arm64.deb ... Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ... Selecting previously unselected package liblzf1:arm64. Preparing to unpack .../084-liblzf1_3.6-4+b1_arm64.deb ... Unpacking liblzf1:arm64 (3.6-4+b1) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../085-libpython3.11-stdlib_3.11.9-1_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.9-1) ... Selecting previously unselected package libxslt1.1:arm64. Preparing to unpack .../086-libxslt1.1_1.1.35-1+b1_arm64.deb ... Unpacking libxslt1.1:arm64 (1.1.35-1+b1) ... Selecting previously unselected package lsb-release. Preparing to unpack .../087-lsb-release_12.1-1_all.deb ... Unpacking lsb-release (12.1-1) ... Selecting previously unselected package patool. Preparing to unpack .../088-patool_2.0.0-2_all.deb ... Unpacking patool (2.0.0-2) ... Selecting previously unselected package python3.11. Preparing to unpack .../089-python3.11_3.11.9-1_arm64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package python3-all. Preparing to unpack .../090-python3-all_3.12.2-1_arm64.deb ... Unpacking python3-all (3.12.2-1) ... Selecting previously unselected package python3-annexremote. Preparing to unpack .../091-python3-annexremote_1.6.4-2_all.deb ... Unpacking python3-annexremote (1.6.4-2) ... Selecting previously unselected package python3-appdirs. Preparing to unpack .../092-python3-appdirs_1.4.4-4_all.deb ... Unpacking python3-appdirs (1.4.4-4) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../093-python3-certifi_2024.6.2-1_all.deb ... Unpacking python3-certifi (2024.6.2-1) ... Selecting previously unselected package python3-cffi-backend:arm64. Preparing to unpack .../094-python3-cffi-backend_1.16.0-2+b2_arm64.deb ... Unpacking python3-cffi-backend:arm64 (1.16.0-2+b2) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../095-python3-chardet_5.2.0+dfsg-1_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-1) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../096-python3-charset-normalizer_3.3.2-1_all.deb ... Unpacking python3-charset-normalizer (3.3.2-1) ... Selecting previously unselected package python3-ci-info. Preparing to unpack .../097-python3-ci-info_0.3.0-1_all.deb ... Unpacking python3-ci-info (0.3.0-1) ... Selecting previously unselected package python3-lxml:arm64. Preparing to unpack .../098-python3-lxml_5.2.1-1_arm64.deb ... Unpacking python3-lxml:arm64 (5.2.1-1) ... Selecting previously unselected package python3-citeproc. Preparing to unpack .../099-python3-citeproc_0.6.0-3_all.deb ... Unpacking python3-citeproc (0.6.0-3) ... Selecting previously unselected package python3-colorama. Preparing to unpack .../100-python3-colorama_0.4.6-4_all.deb ... Unpacking python3-colorama (0.4.6-4) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../101-python3-typing-extensions_4.12.2-1_all.deb ... Unpacking python3-typing-extensions (4.12.2-1) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../102-python3-zipp_3.19.2-2_all.deb ... Unpacking python3-zipp (3.19.2-2) ... Selecting previously unselected package python3-importlib-metadata. Preparing to unpack .../103-python3-importlib-metadata_8.0.0-1_all.deb ... Unpacking python3-importlib-metadata (8.0.0-1) ... Selecting previously unselected package python3-click. Preparing to unpack .../104-python3-click_8.1.7-1_all.deb ... Unpacking python3-click (8.1.7-1) ... Selecting previously unselected package python3-cryptography. Preparing to unpack .../105-python3-cryptography_42.0.5-2_arm64.deb ... Unpacking python3-cryptography (42.0.5-2) ... Selecting previously unselected package python3-distro. Preparing to unpack .../106-python3-distro_1.9.0-1_all.deb ... Unpacking python3-distro (1.9.0-1) ... Selecting previously unselected package python3-monotonic. Preparing to unpack .../107-python3-monotonic_1.6-2_all.deb ... Unpacking python3-monotonic (1.6-2) ... Selecting previously unselected package python3-fasteners. Preparing to unpack .../108-python3-fasteners_0.18-2_all.deb ... Unpacking python3-fasteners (0.18-2) ... Selecting previously unselected package python3-idna. Preparing to unpack .../109-python3-idna_3.6-2.1_all.deb ... Unpacking python3-idna (3.6-2.1) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../110-python3-urllib3_2.0.7-2_all.deb ... Unpacking python3-urllib3 (2.0.7-2) ... Selecting previously unselected package python3-requests. Preparing to unpack .../111-python3-requests_2.32.3+dfsg-1_all.deb ... Unpacking python3-requests (2.32.3+dfsg-1) ... Selecting previously unselected package python3-requests-toolbelt. Preparing to unpack .../112-python3-requests-toolbelt_1.0.0-2_all.deb ... Unpacking python3-requests-toolbelt (1.0.0-2) ... Selecting previously unselected package python3-gitlab. Preparing to unpack .../113-python3-gitlab_1%3a4.3.0-1_all.deb ... Unpacking python3-gitlab (1:4.3.0-1) ... Selecting previously unselected package python3-humanize. Preparing to unpack .../114-python3-humanize_4.9.0-1_all.deb ... Unpacking python3-humanize (4.9.0-1) ... Selecting previously unselected package python3-iso8601. Preparing to unpack .../115-python3-iso8601_1.0.2-1_all.deb ... Unpacking python3-iso8601 (1.0.2-1) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../116-python3-jaraco.context_4.3.0-1_all.deb ... Unpacking python3-jaraco.context (4.3.0-1) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../117-python3-more-itertools_10.3.0-1_all.deb ... Unpacking python3-more-itertools (10.3.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../118-python3-jaraco.functools_4.0.0-1_all.deb ... Unpacking python3-jaraco.functools (4.0.0-1) ... Selecting previously unselected package python3-jeepney. Preparing to unpack .../119-python3-jeepney_0.8.0-3_all.deb ... Unpacking python3-jeepney (0.8.0-3) ... Selecting previously unselected package python3-secretstorage. Preparing to unpack .../120-python3-secretstorage_3.3.3-3_all.deb ... Unpacking python3-secretstorage (3.3.3-3) ... Selecting previously unselected package python3-jaraco.classes. Preparing to unpack .../121-python3-jaraco.classes_3.2.1-4_all.deb ... Unpacking python3-jaraco.classes (3.2.1-4) ... Selecting previously unselected package python3-keyring. Preparing to unpack .../122-python3-keyring_25.2.1-1_all.deb ... Unpacking python3-keyring (25.2.1-1) ... Selecting previously unselected package python3-pycryptodome. Preparing to unpack .../123-python3-pycryptodome_3.20.0+dfsg-1_arm64.deb ... Unpacking python3-pycryptodome (3.20.0+dfsg-1) ... Selecting previously unselected package python3-keyrings.alt. Preparing to unpack .../124-python3-keyrings.alt_5.0.1-1_all.deb ... Unpacking python3-keyrings.alt (5.0.1-1) ... Selecting previously unselected package python3-msgpack. Preparing to unpack .../125-python3-msgpack_1.0.3-3+b1_arm64.deb ... Unpacking python3-msgpack (1.0.3-3+b1) ... Selecting previously unselected package python3-tqdm. Preparing to unpack .../126-python3-tqdm_4.66.4-1_all.deb ... Unpacking python3-tqdm (4.66.4-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../127-python3-packaging_24.0-1_all.deb ... Unpacking python3-packaging (24.0-1) ... Selecting previously unselected package python3-datalad. Preparing to unpack .../128-python3-datalad_1.1.0-1_all.deb ... Unpacking python3-datalad (1.1.0-1) ... Selecting previously unselected package python3-six. Preparing to unpack .../129-python3-six_1.16.0-6_all.deb ... Unpacking python3-six (1.16.0-6) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../130-python3-dateutil_2.9.0-2_all.deb ... Unpacking python3-dateutil (2.9.0-2) ... Selecting previously unselected package python3-pydicom. Preparing to unpack .../131-python3-pydicom_2.4.3-1_all.deb ... Unpacking python3-pydicom (2.4.3-1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../132-python3-numpy_1%3a1.26.4+ds-10_arm64.deb ... Unpacking python3-numpy (1:1.26.4+ds-10) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../133-python3-decorator_5.1.1-5_all.deb ... Unpacking python3-decorator (5.1.1-5) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../134-python3-scipy_1.12.0-2_arm64.deb ... Unpacking python3-scipy (1.12.0-2) ... Selecting previously unselected package python3-nibabel. Preparing to unpack .../135-python3-nibabel_5.2.1-2_all.deb ... Unpacking python3-nibabel (5.2.1-2) ... Selecting previously unselected package python3-dcmstack. Preparing to unpack .../136-python3-dcmstack_0.9-3_all.deb ... Unpacking python3-dcmstack (0.9-3) ... Selecting previously unselected package python3-jsonpickle. Preparing to unpack .../137-python3-jsonpickle_3.2.2+dfsg-1_all.deb ... Unpacking python3-jsonpickle (3.2.2+dfsg-1) ... Selecting previously unselected package python3-ordered-set. Preparing to unpack .../138-python3-ordered-set_4.1.0-1_all.deb ... Unpacking python3-ordered-set (4.1.0-1) ... Selecting previously unselected package python3-deepdiff. Preparing to unpack .../139-python3-deepdiff_6.7.1-2_all.deb ... Unpacking python3-deepdiff (6.7.1-2) ... Selecting previously unselected package python3-h5py-serial. Preparing to unpack .../140-python3-h5py-serial_3.11.0-2_arm64.deb ... Unpacking python3-h5py-serial (3.11.0-2) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../141-python3-h5py_3.11.0-2_all.deb ... Unpacking python3-h5py (3.11.0-2) ... Selecting previously unselected package python3-setuptools-scm. Preparing to unpack .../142-python3-setuptools-scm_8.1.0-1_all.deb ... Unpacking python3-setuptools-scm (8.1.0-1) ... Selecting previously unselected package python3-trx-python. Preparing to unpack .../143-python3-trx-python_0.2.9-1_all.deb ... Unpacking python3-trx-python (0.2.9-1) ... Selecting previously unselected package python3-tz. Preparing to unpack .../144-python3-tz_2024.1-2_all.deb ... Unpacking python3-tz (2024.1-2) ... Selecting previously unselected package python3-pandas-lib:arm64. Preparing to unpack .../145-python3-pandas-lib_2.1.4+dfsg-8_arm64.deb ... Unpacking python3-pandas-lib:arm64 (2.1.4+dfsg-8) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../146-python3-pandas_2.1.4+dfsg-8_all.deb ... Unpacking python3-pandas (2.1.4+dfsg-8) ... Selecting previously unselected package python3-dipy-lib:arm64. Preparing to unpack .../147-python3-dipy-lib_1.9.0-5_arm64.deb ... Unpacking python3-dipy-lib:arm64 (1.9.0-5) ... Selecting previously unselected package python3-dipy. Preparing to unpack .../148-python3-dipy_1.9.0-5_all.deb ... Unpacking python3-dipy (1.9.0-5) ... Selecting previously unselected package python3-duecredit. Preparing to unpack .../149-python3-duecredit_0.9.1-1.1_all.deb ... Unpacking python3-duecredit (0.9.1-1.1) ... Selecting previously unselected package python3-etelemetry. Preparing to unpack .../150-python3-etelemetry_0.3.1-1_all.deb ... Unpacking python3-etelemetry (0.3.1-1) ... Selecting previously unselected package python3-filelock. Preparing to unpack .../151-python3-filelock_3.15.4-1_all.deb ... Unpacking python3-filelock (3.15.4-1) ... Selecting previously unselected package python3-funcsigs. Preparing to unpack .../152-python3-funcsigs_1.0.2-5_all.deb ... Unpacking python3-funcsigs (1.0.2-5) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../153-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-inotify. Preparing to unpack .../154-python3-inotify_0.2.10-5_all.deb ... Unpacking python3-inotify (0.2.10-5) ... Selecting previously unselected package python3-isodate. Preparing to unpack .../155-python3-isodate_0.6.1-2_all.deb ... Unpacking python3-isodate (0.6.1-2) ... Selecting previously unselected package python3-networkx. Preparing to unpack .../156-python3-networkx_3.2.1-4_all.deb ... Unpacking python3-networkx (3.2.1-4) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../157-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) ... Selecting previously unselected package python3-rdflib. Preparing to unpack .../158-python3-rdflib_7.0.0-1_all.deb ... Unpacking python3-rdflib (7.0.0-1) ... Selecting previously unselected package python3-prov. Preparing to unpack .../159-python3-prov_2.0.1-1_all.deb ... Unpacking python3-prov (2.0.1-1) ... Selecting previously unselected package python3-simplejson. Preparing to unpack .../160-python3-simplejson_3.19.2-1+b1_arm64.deb ... Unpacking python3-simplejson (3.19.2-1+b1) ... Selecting previously unselected package python3-traits. Preparing to unpack .../161-python3-traits_6.4.3-1_arm64.deb ... Unpacking python3-traits (6.4.3-1) ... Selecting previously unselected package python3-psutil. Preparing to unpack .../162-python3-psutil_5.9.8-2_arm64.deb ... Unpacking python3-psutil (5.9.8-2) ... Selecting previously unselected package python3-nipype. Preparing to unpack .../163-python3-nipype_1.8.6-3_all.deb ... Unpacking python3-nipype (1.8.6-3) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../164-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../165-python3-pytest_8.2.2-2_all.deb ... Unpacking python3-pytest (8.2.2-2) ... Selecting previously unselected package python3-tinydb. Preparing to unpack .../166-python3-tinydb_3.15.2-4_all.deb ... Unpacking python3-tinydb (3.15.2-4) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:arm64 (1.5.7-2) ... Setting up libkeyutils1:arm64 (1.6.3-3) ... Setting up libicu72:arm64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-9) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libcbor0.10:arm64 (0.10.2-1.2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:arm64 (0.2.5-1+b1) ... Setting up libyaml-cpp0.8:arm64 (0.8.0+dfsg-6+b1) ... Setting up libdebhelper-perl (13.16) ... Setting up libbrotli1:arm64 (1.1.0-2+b3) ... Setting up libedit2:arm64 (3.1-20240517-1) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up libpsl5t64:arm64 (0.21.2-1.1) ... Setting up libnghttp2-14:arm64 (1.62.1-1) ... Setting up gettext-base (0.22.5-1) ... Setting up m4 (1.4.19-4) ... Setting up 7zip (24.07+dfsg-1) ... Setting up libcom-err2:arm64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libturbojpeg0:arm64 (1:2.1.5-3) ... Setting up libaec0:arm64 (1.1.3-1) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up libkrb5support0:arm64 (1.21.3-1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Aug 3 06:45:57 UTC 2025. Universal Time is now: Sun Aug 3 06:45:57 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up liberror-perl (0.17029-2) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up liblzf1:arm64 (3.6-4+b1) ... Setting up autopoint (0.22.5-1) ... Setting up libk5crypto3:arm64 (1.21.3-1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:arm64 (14.1.0-2) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up libopenjp2-7:arm64 (2.5.0-2+b3) ... Setting up git-man (1:2.45.2-1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:arm64 (1.21.3-1) ... Setting up libpython3.11-minimal:arm64 (3.11.9-1) ... Setting up libssh2-1t64:arm64 (1.11.0-5) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up lsb-release (12.1-1) ... Setting up libfido2-1:arm64 (1.15.0-1) ... Setting up openssl (3.2.2-1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:arm64 (2.12.7+dfsg-3) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up libsz2:arm64 (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libpopt0:arm64 (1.19+dfsg-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.11-minimal (3.11.9-1) ... Setting up liblapack3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.22.5-1) ... Setting up libtool (2.4.7-7) ... Setting up dcm2niix (1.0.20220720-1+b1) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libgssapi-krb5-2:arm64 (1.21.3-1) ... Setting up libjs-sphinxdoc (7.2.6-9) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up libxslt1.1:arm64 (1.1.35-1+b1) ... Setting up rsync (3.3.0-1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:arm64 (3.12.4-1) ... Setting up libcurl4t64:arm64 (8.8.0-1) ... Setting up openssh-client (1:9.7p1-6) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.9-1) ... Setting up python3.12 (3.12.4-1) ... Setting up libcurl3t64-gnutls:arm64 (8.8.0-1) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up git (1:2.45.2-1) ... Setting up curl (8.8.0-1) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-3.3) ... Setting up libpython3-stdlib:arm64 (3.12.2-1) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up debhelper (13.16) ... Setting up python3 (3.12.2-1) ... Setting up python3-zipp (3.19.2-2) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-monotonic (1.6-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-simplejson (3.19.2-1+b1) ... Setting up python3-isodate (0.6.1-2) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.0-1) ... Setting up python3-iso8601 (1.0.2-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.6.2-1) ... Setting up python3-funcsigs (1.0.2-5) ... Setting up python3-idna (3.6-2.1) ... Setting up python3-typing-extensions (4.12.2-1) ... Setting up python3-fasteners (0.18-2) ... Setting up python3-jeepney (0.8.0-3) ... Setting up python3-ci-info (0.3.0-1) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-inotify (0.2.10-5) ... Setting up python3-lxml:arm64 (5.2.1-1) ... Setting up python3-rdflib (7.0.0-1) ... Setting up git-annex (10.20240430-1) ... Setting up python3-pydicom (2.4.3-1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up python3-msgpack (1.0.3-3+b1) ... Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-cffi-backend:arm64 (1.16.0-2+b2) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up python3-more-itertools (10.3.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-filelock (3.15.4-1) ... Setting up python3-jsonpickle (3.2.2+dfsg-1) ... Setting up python3-jaraco.classes (3.2.1-4) ... Setting up patool (2.0.0-2) ... Setting up python3-annexremote (1.6.4-2) ... Setting up python3-importlib-metadata (8.0.0-1) ... Setting up python3-jaraco.functools (4.0.0-1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-distro (1.9.0-1) ... Setting up python3-traits (6.4.3-1) ... Setting up python3-jaraco.context (4.3.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-citeproc (0.6.0-3) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (8.2.2-2) ... Setting up python3-pycryptodome (3.20.0+dfsg-1) ... Setting up python3-tqdm (4.66.4-1) ... Setting up python3-tinydb (3.15.2-4) ... Setting up python3-all (3.12.2-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-click (8.1.7-1) ... Setting up python3-networkx (3.2.1-4) ... Setting up python3-setuptools-scm (8.1.0-1) ... Setting up python3-prov (2.0.1-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-cryptography (42.0.5-2) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-10) ... Setting up python3-humanize (4.9.0-1) ... Setting up dh-python (6.20240422) ... Setting up python3-deepdiff (6.7.1-2) ... Setting up python3-scipy (1.12.0-2) ... Setting up python3-requests-toolbelt (1.0.0-2) ... Setting up python3-duecredit (0.9.1-1.1) ... Setting up python3-pandas-lib:arm64 (2.1.4+dfsg-8) ... Setting up python3-h5py-serial (3.11.0-2) ... Setting up python3-etelemetry (0.3.1-1) ... Setting up python3-dipy-lib:arm64 (1.9.0-5) ... Setting up python3-pandas (2.1.4+dfsg-8) ... Setting up python3-secretstorage (3.3.3-3) ... Setting up python3-nibabel (5.2.1-2) ... Setting up python3-h5py (3.11.0-2) ... Setting up python3-keyring (25.2.1-1) ... Setting up python3-gitlab (1:4.3.0-1) ... Setting up python3-trx-python (0.2.9-1) ... Setting up python3-dipy (1.9.0-5) ... /usr/lib/python3/dist-packages/dipy/reconst/qti.py:19: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:57: SyntaxWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:91: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:137: SyntaxWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:187: SyntaxWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:222: SyntaxWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:280: SyntaxWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). /usr/lib/python3/dist-packages/dipy/reconst/qti.py:323: SyntaxWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:395: SyntaxWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:761: SyntaxWarning: invalid escape sequence '\l' """Mean diffusivity. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:783: SyntaxWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:805: SyntaxWarning: invalid escape sequence '\m' """Shear variance. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:827: SyntaxWarning: invalid escape sequence '\m' """Total isotropic variance. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:863: SyntaxWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with /usr/lib/python3/dist-packages/dipy/reconst/qti.py:886: SyntaxWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:909: SyntaxWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:934: SyntaxWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:953: SyntaxWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:979: SyntaxWarning: invalid escape sequence '\s' """Fractional anisotropy. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:998: SyntaxWarning: invalid escape sequence '\m' """Microscopic orientation coherence. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:1036: SyntaxWarning: invalid escape sequence '\m' """Bulk kurtosis. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:1061: SyntaxWarning: invalid escape sequence '\m' """Shear kurtosis. /usr/lib/python3/dist-packages/dipy/reconst/qti.py:1086: SyntaxWarning: invalid escape sequence '\m' """Microscopic kurtosis. Setting up python3-dcmstack (0.9-3) ... Setting up python3-keyrings.alt (5.0.1-1) ... Setting up python3-nipype (1.8.6-3) ... /usr/lib/python3/dist-packages/nipype/interfaces/io.py:1402: SyntaxWarning: invalid escape sequence '\w' field_name = re.match("\w+", field_name).group() /usr/lib/python3/dist-packages/nipype/interfaces/utility/base.py:232: SyntaxWarning: invalid escape sequence '\w' """Change the name of a file based on a mapped format string. Setting up python3-datalad (1.1.0-1) ... Processing triggers for libc-bin (2.38-13) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/heudiconv-1.1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../heudiconv_1.1.1-1_source.changes dpkg-buildpackage: info: source package heudiconv dpkg-buildpackage: info: source version 1.1.1-1 dpkg-buildpackage: info: source distribution experimental dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.11 3.12" I: pybuild base:311: python3.11 setup.py clean running clean removing '/build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/heudiconv.substvars debian/files rm -fr -- debian/heudiconv/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules execute_after_dh_clean make[1]: Entering directory '/build/reproducible-path/heudiconv-1.1.1' # Ahhhhhhh! rm -rf .pybuild build .pytest_cache/ rm -rf heudiconv.egg-info/ make[1]: Leaving directory '/build/reproducible-path/heudiconv-1.1.1' debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.11 3.12" I: pybuild base:311: python3.11 setup.py config running config I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.11 3.12" I: pybuild base:311: /usr/bin/python3.11 setup.py build running build running build_py creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/info.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/utils.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/queue.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/parser.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/main.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/due.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/dicoms.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/convert.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/_version.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv copying heudiconv/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/utils.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_utils.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_tarballs.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_regression.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_queue.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_monitor.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_main.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_heuristics.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_dicoms.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_convert.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_archives.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/conftest.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/anonymize_script.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests copying heudiconv/tests/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/uc_bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_reproin.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_b0dwi_for_fmap.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/studyforrest_phase2.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/reproin.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/multires_7Tbold.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/example.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall_custom.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/cmrr_heuristic.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_with_ses.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_PhoenixReport.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_ME.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/banda-bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/heuristics creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/external copying heudiconv/external/dlad.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/external copying heudiconv/external/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/external creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/cli copying heudiconv/cli/run.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/cli copying heudiconv/cli/monitor.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/cli copying heudiconv/cli/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/cli creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/test_dlad.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/external/tests copying heudiconv/py.typed -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/phantom.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/axasc35.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/MRI_102TD_PHA_S.MR.Chen_Matthews_1.3.1.2022.11.16.15.50.20.357.31204541.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00003.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00002.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/b0dwiForFmap creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm copying heudiconv/tests/data/01-fmap_acq-3mm/1.3.12.2.1107.5.2.43.66112.2016101409263663466202201.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/01-anat-scout copying heudiconv/tests/data/01-anat-scout/0001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/01-anat-scout creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/Phoenix creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument copying heudiconv/tests/data/Phoenix/99+PhoenixDocument/99+PhoenixDocument+00001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/Phoenix/01+AA/01+AA+00001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/sample_nifti_params.txt -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/sample_nifti.nii.gz -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/data I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/info.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/utils.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/queue.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/parser.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/main.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/due.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/dicoms.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/convert.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/_version.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/utils.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_utils.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_tarballs.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_regression.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_queue.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_monitor.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_main.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_heuristics.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_dicoms.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_convert.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_archives.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/conftest.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/anonymize_script.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/uc_bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_reproin.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_b0dwi_for_fmap.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/studyforrest_phase2.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/reproin.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/multires_7Tbold.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/example.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall_custom.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/cmrr_heuristic.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_with_ses.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_PhoenixReport.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_ME.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/banda-bids.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external copying heudiconv/external/dlad.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external copying heudiconv/external/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli copying heudiconv/cli/run.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli copying heudiconv/cli/monitor.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli copying heudiconv/cli/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/test_dlad.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/__init__.py -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external/tests copying heudiconv/py.typed -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/phantom.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/axasc35.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/MRI_102TD_PHA_S.MR.Chen_Matthews_1.3.1.2022.11.16.15.50.20.357.31204541.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00003.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00002.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm copying heudiconv/tests/data/01-fmap_acq-3mm/1.3.12.2.1107.5.2.43.66112.2016101409263663466202201.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-anat-scout copying heudiconv/tests/data/01-anat-scout/0001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-anat-scout creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument copying heudiconv/tests/data/Phoenix/99+PhoenixDocument/99+PhoenixDocument+00001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument creating /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/Phoenix/01+AA/01+AA+00001.dcm -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/sample_nifti_params.txt -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/sample_nifti.nii.gz -> /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.11 3.12" I: pybuild pybuild:308: cp -a heudiconv/tests /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/ I: pybuild base:311: cd /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build; python3.11 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero' ============================= test session starts ============================== platform linux -- Python 3.11.9, pytest-8.2.2, pluggy-1.5.0 rootdir: /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build configfile: pyproject.toml collected 116 items / 1 deselected / 115 selected heudiconv/tests/test_archives.py .......... [ 8%] heudiconv/tests/test_bids.py ..................................F. [ 40%] heudiconv/tests/test_convert.py .......... [ 48%] heudiconv/tests/test_dicoms.py .........ss [ 58%] heudiconv/tests/test_heuristics.py .ssss...... [ 67%] heudiconv/tests/test_main.py .....F........ [ 80%] heudiconv/tests/test_monitor.py ssss [ 83%] heudiconv/tests/test_queue.py ... [ 86%] heudiconv/tests/test_regression.py FFF. [ 89%] heudiconv/tests/test_tarballs.py . [ 90%] heudiconv/tests/test_utils.py ........... [100%] =================================== FAILURES =================================== _________________________ test_ME_mag_phase_conversion _________________________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffffb6505710> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-0/test_ME_mag_phase_conversion0') subID = 'MEGRE', heuristic = 'bids_ME.py' @pytest.mark.skipif(not have_datalad, reason="no datalad") def test_ME_mag_phase_conversion( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subID: str = "MEGRE", heuristic: str = "bids_ME.py", ) -> None: """Unit test for the case of multi-echo GRE data with magnitude and phase. The different echoes should be labeled automatically. """ monkeypatch.chdir(tmp_path) try: > datadir = fetch_data(tmp_path, f"dicoms/velasco/{subID}") /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/test_bids.py:1367: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.11/importlib/__init__.py:126: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError ___________________________ test_prepare_for_datalad ___________________________ tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-0/test_prepare_for_datalad0') def test_prepare_for_datalad(tmp_path: Path) -> None: pytest.importorskip("datalad", minversion=MIN_VERSION) studydir = tmp_path / "PI" / "study" studydir_ = str(studydir) os.makedirs(studydir_) populate_bids_templates(studydir_) > add_to_datalad(str(tmp_path), studydir_, None, None) heudiconv/tests/test_main.py:124: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ heudiconv/external/dlad.py:52: in add_to_datalad import datalad.api as dl /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.11/importlib/__init__.py:126: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError __________________ test_conversion[None-reproin.py-sid000143] __________________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffffb63a7a50> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-0/test_conversion_None_reproin_p0') subject = 'sid000143', heuristic = 'reproin.py', anon_cmd = None @pytest.mark.skipif(not have_datalad, reason="no datalad") @pytest.mark.parametrize("subject", ["sid000143"]) @pytest.mark.parametrize("heuristic", ["reproin.py"]) @pytest.mark.parametrize("anon_cmd", [None, "anonymize_script.py"]) def test_conversion( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subject: str, heuristic: str, anon_cmd: Optional[str], ) -> None: monkeypatch.chdir(tmp_path) try: > datadir = fetch_data( tmp_path, "dbic/QA", # path from datalad database root getpath=op.join("sourcedata", f"sub-{subject}"), ) /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/test_regression.py:41: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.11/importlib/__init__.py:126: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError __________ test_conversion[anonymize_script.py-reproin.py-sid000143] ___________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffffb65a1d90> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-0/test_conversion_anonymize_scri0') subject = 'sid000143', heuristic = 'reproin.py' anon_cmd = 'anonymize_script.py' @pytest.mark.skipif(not have_datalad, reason="no datalad") @pytest.mark.parametrize("subject", ["sid000143"]) @pytest.mark.parametrize("heuristic", ["reproin.py"]) @pytest.mark.parametrize("anon_cmd", [None, "anonymize_script.py"]) def test_conversion( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subject: str, heuristic: str, anon_cmd: Optional[str], ) -> None: monkeypatch.chdir(tmp_path) try: > datadir = fetch_data( tmp_path, "dbic/QA", # path from datalad database root getpath=op.join("sourcedata", f"sub-{subject}"), ) /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/test_regression.py:41: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.11/importlib/__init__.py:126: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError ________________________________ test_multiecho ________________________________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffffb60d84d0> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-0/test_multiecho0') subject = 'MEEPI', heuristic = 'bids_ME.py' @pytest.mark.skipif(not have_datalad, reason="no datalad") def test_multiecho( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subject: str = "MEEPI", heuristic: str = "bids_ME.py", ) -> None: monkeypatch.chdir(tmp_path) try: > datadir = fetch_data(tmp_path, "dicoms/velasco/MEEPI") /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/test_regression.py:109: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.11/importlib/__init__.py:126: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated import sre_parse ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated import sre_constants heudiconv/tests/test_convert.py::test_b0dwi_for_fmap heudiconv/tests/test_convert.py::test_b0dwi_for_fmap /usr/lib/python3/dist-packages/nipype/utils/filemanip.py:696: DeprecationWarning: 'locale.getdefaultlocale' is deprecated and slated for removal in Python 3.15. Use setlocale(), getencoding() and getlocale() instead. default_encoding = encoding or locale.getdefaultlocale()[1] or "UTF-8" heudiconv/tests/test_convert.py: 4 warnings heudiconv/tests/test_dicoms.py: 2 warnings heudiconv/tests/test_heuristics.py: 10 warnings heudiconv/tests/test_main.py: 2 warnings heudiconv/tests/test_regression.py: 4 warnings /usr/lib/python3/dist-packages/nipype/utils/subprocess.py:34: DeprecationWarning: 'locale.getdefaultlocale' is deprecated and slated for removal in Python 3.15. Use setlocale(), getencoding() and getlocale() instead. self.default_encoding = locale.getdefaultlocale()[1] or "UTF-8" heudiconv/tests/test_convert.py::test_b0dwi_for_fmap /usr/lib/python3/dist-packages/pydicom/valuerep.py:443: UserWarning: The value length (22) exceeds the maximum length of 16 allowed for VR SH. warnings.warn(msg) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ FAILED heudiconv/tests/test_bids.py::test_ME_mag_phase_conversion - ModuleNot... FAILED heudiconv/tests/test_main.py::test_prepare_for_datalad - ModuleNotFoun... FAILED heudiconv/tests/test_regression.py::test_conversion[None-reproin.py-sid000143] FAILED heudiconv/tests/test_regression.py::test_conversion[anonymize_script.py-reproin.py-sid000143] FAILED heudiconv/tests/test_regression.py::test_multiecho - ModuleNotFoundErr... ==== 5 failed, 100 passed, 10 skipped, 1 deselected, 27 warnings in 10.48s ===== E: pybuild pybuild:389: test: plugin distutils failed with: exit code=1: cd /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.11_heudiconv/build; python3.11 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero' I: pybuild pybuild:308: cp -a heudiconv/tests /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/ I: pybuild base:311: cd /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build; python3.12 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero' ============================= test session starts ============================== platform linux -- Python 3.12.4, pytest-8.2.2, pluggy-1.5.0 rootdir: /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build configfile: pyproject.toml collected 116 items / 1 deselected / 115 selected heudiconv/tests/test_archives.py .......... [ 8%] heudiconv/tests/test_bids.py ..................................F. [ 40%] heudiconv/tests/test_convert.py .......... [ 48%] heudiconv/tests/test_dicoms.py .........ss [ 58%] heudiconv/tests/test_heuristics.py .ssss...... [ 67%] heudiconv/tests/test_main.py .....F........ [ 80%] heudiconv/tests/test_monitor.py ssss [ 83%] heudiconv/tests/test_queue.py ... [ 86%] heudiconv/tests/test_regression.py FFF. [ 89%] heudiconv/tests/test_tarballs.py . [ 90%] heudiconv/tests/test_utils.py ........... [100%] =================================== FAILURES =================================== _________________________ test_ME_mag_phase_conversion _________________________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffff8ee6b0e0> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-1/test_ME_mag_phase_conversion0') subID = 'MEGRE', heuristic = 'bids_ME.py' @pytest.mark.skipif(not have_datalad, reason="no datalad") def test_ME_mag_phase_conversion( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subID: str = "MEGRE", heuristic: str = "bids_ME.py", ) -> None: """Unit test for the case of multi-echo GRE data with magnitude and phase. The different echoes should be labeled automatically. """ monkeypatch.chdir(tmp_path) try: > datadir = fetch_data(tmp_path, f"dicoms/velasco/{subID}") /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/test_bids.py:1367: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.12/importlib/__init__.py:90: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError ___________________________ test_prepare_for_datalad ___________________________ tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-1/test_prepare_for_datalad0') def test_prepare_for_datalad(tmp_path: Path) -> None: pytest.importorskip("datalad", minversion=MIN_VERSION) studydir = tmp_path / "PI" / "study" studydir_ = str(studydir) os.makedirs(studydir_) populate_bids_templates(studydir_) > add_to_datalad(str(tmp_path), studydir_, None, None) heudiconv/tests/test_main.py:124: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ heudiconv/external/dlad.py:52: in add_to_datalad import datalad.api as dl /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.12/importlib/__init__.py:90: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError __________________ test_conversion[None-reproin.py-sid000143] __________________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffff8ea6a750> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-1/test_conversion_None_reproin_p0') subject = 'sid000143', heuristic = 'reproin.py', anon_cmd = None @pytest.mark.skipif(not have_datalad, reason="no datalad") @pytest.mark.parametrize("subject", ["sid000143"]) @pytest.mark.parametrize("heuristic", ["reproin.py"]) @pytest.mark.parametrize("anon_cmd", [None, "anonymize_script.py"]) def test_conversion( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subject: str, heuristic: str, anon_cmd: Optional[str], ) -> None: monkeypatch.chdir(tmp_path) try: > datadir = fetch_data( tmp_path, "dbic/QA", # path from datalad database root getpath=op.join("sourcedata", f"sub-{subject}"), ) /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/test_regression.py:41: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.12/importlib/__init__.py:90: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError __________ test_conversion[anonymize_script.py-reproin.py-sid000143] ___________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffff8ec93aa0> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-1/test_conversion_anonymize_scri0') subject = 'sid000143', heuristic = 'reproin.py' anon_cmd = 'anonymize_script.py' @pytest.mark.skipif(not have_datalad, reason="no datalad") @pytest.mark.parametrize("subject", ["sid000143"]) @pytest.mark.parametrize("heuristic", ["reproin.py"]) @pytest.mark.parametrize("anon_cmd", [None, "anonymize_script.py"]) def test_conversion( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subject: str, heuristic: str, anon_cmd: Optional[str], ) -> None: monkeypatch.chdir(tmp_path) try: > datadir = fetch_data( tmp_path, "dbic/QA", # path from datalad database root getpath=op.join("sourcedata", f"sub-{subject}"), ) /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/test_regression.py:41: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.12/importlib/__init__.py:90: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError ________________________________ test_multiecho ________________________________ monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0xffff8ea6a750> tmp_path = PosixPath('/tmp/pytest-of-pbuilder1/pytest-1/test_multiecho0') subject = 'MEEPI', heuristic = 'bids_ME.py' @pytest.mark.skipif(not have_datalad, reason="no datalad") def test_multiecho( monkeypatch: pytest.MonkeyPatch, tmp_path: Path, subject: str = "MEEPI", heuristic: str = "bids_ME.py", ) -> None: monkeypatch.chdir(tmp_path) try: > datadir = fetch_data(tmp_path, "dicoms/velasco/MEEPI") /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/test_regression.py:109: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/utils.py:74: in fetch_data from datalad import api /usr/lib/python3/dist-packages/datalad/api.py:12: in from datalad.coreapi import * /usr/lib/python3/dist-packages/datalad/coreapi.py:42: in _generate_func_api() /usr/lib/python3/dist-packages/datalad/coreapi.py:35: in _generate_func_api mod = import_module(intfspec[0], package='datalad') /usr/lib/python3.12/importlib/__init__.py:90: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib/python3/dist-packages/datalad/local/addurls.py:58: in from datalad.support.s3 import get_versioned_url _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil; coding: utf-8 -*- # vi: set ft=python sts=4 ts=4 sw=4 et: ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ## # # See COPYING file distributed along with the datalad package for the # copyright and license terms. # ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##g """Variety of helpers to deal with AWS S3 Use as a script to generate test buckets via e.g. python -m datalad.support.s3 generate test1_dirs """ __docformat__ = 'restructuredtext' import mimetypes from pathlib import PurePath import re from urllib.request import urlopen, Request > import boto3 E ModuleNotFoundError: No module named 'boto3' /usr/lib/python3/dist-packages/datalad/support/s3.py:23: ModuleNotFoundError =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated import sre_parse ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated import sre_constants heudiconv/tests/test_archives.py::test_get_extracted_dicoms_single_session_is_none heudiconv/tests/test_archives.py::test_get_extracted_dicoms_multple_session_integers heudiconv/tests/test_archives.py::test_get_extracted_dicoms_multple_session_integers heudiconv/tests/test_archives.py::test_get_extracted_dicoms_from_archives[tar] heudiconv/tests/test_archives.py::test_get_extracted_dicoms_from_archives[gztar] heudiconv/tests/test_archives.py::test_get_extracted_dicoms_from_archives[bztar] heudiconv/tests/test_archives.py::test_get_extracted_dicoms_from_archives[xztar] heudiconv/tests/test_archives.py::test_get_extracted_dicoms_from_mixed_list /usr/lib/python3.12/shutil.py:1272: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. tarobj.extractall(extract_dir, filter=filter) heudiconv/tests/test_convert.py: 5 warnings heudiconv/tests/test_dicoms.py: 1 warning heudiconv/tests/test_heuristics.py: 10 warnings heudiconv/tests/test_main.py: 1 warning heudiconv/tests/test_regression.py: 2 warnings /usr/lib/python3/dist-packages/nipype/interfaces/base/support.py:76: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). self._runtime.startTime = dt.isoformat(dt.utcnow()) heudiconv/tests/test_convert.py::test_b0dwi_for_fmap heudiconv/tests/test_convert.py::test_b0dwi_for_fmap /usr/lib/python3/dist-packages/nipype/utils/filemanip.py:696: DeprecationWarning: 'locale.getdefaultlocale' is deprecated and slated for removal in Python 3.15. Use setlocale(), getencoding() and getlocale() instead. default_encoding = encoding or locale.getdefaultlocale()[1] or "UTF-8" heudiconv/tests/test_convert.py: 5 warnings heudiconv/tests/test_dicoms.py: 1 warning heudiconv/tests/test_heuristics.py: 10 warnings heudiconv/tests/test_main.py: 1 warning heudiconv/tests/test_regression.py: 2 warnings /usr/lib/python3/dist-packages/nipype/interfaces/base/support.py:84: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). self._runtime.endTime = dt.isoformat(dt.utcnow()) heudiconv/tests/test_convert.py: 4 warnings heudiconv/tests/test_dicoms.py: 2 warnings heudiconv/tests/test_heuristics.py: 10 warnings heudiconv/tests/test_main.py: 2 warnings heudiconv/tests/test_regression.py: 4 warnings /usr/lib/python3/dist-packages/nipype/utils/subprocess.py:34: DeprecationWarning: 'locale.getdefaultlocale' is deprecated and slated for removal in Python 3.15. Use setlocale(), getencoding() and getlocale() instead. self.default_encoding = locale.getdefaultlocale()[1] or "UTF-8" heudiconv/tests/test_convert.py::test_b0dwi_for_fmap /usr/lib/python3/dist-packages/pydicom/valuerep.py:443: UserWarning: The value length (22) exceeds the maximum length of 16 allowed for VR SH. warnings.warn(msg) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ FAILED heudiconv/tests/test_bids.py::test_ME_mag_phase_conversion - ModuleNot... FAILED heudiconv/tests/test_main.py::test_prepare_for_datalad - ModuleNotFoun... FAILED heudiconv/tests/test_regression.py::test_conversion[None-reproin.py-sid000143] FAILED heudiconv/tests/test_regression.py::test_conversion[anonymize_script.py-reproin.py-sid000143] FAILED heudiconv/tests/test_regression.py::test_multiecho - ModuleNotFoundErr... ==== 5 failed, 100 passed, 10 skipped, 1 deselected, 73 warnings in 10.58s ===== E: pybuild pybuild:389: test: plugin distutils failed with: exit code=1: cd /build/reproducible-path/heudiconv-1.1.1/.pybuild/cpython3_3.12_heudiconv/build; python3.12 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero' rm -fr -- /tmp/dh-xdg-rundir-jwFyaLzT dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.11 3.12" returned exit code 13 make: *** [debian/rules:19: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2648022 and its subdirectories