I: pbuilder: network access will be disabled during build I: Current time: Sat Oct 22 08:52:21 +14 2022 I: pbuilder-time-stamp: 1666378341 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [ncbi-vdb_2.9.3+dfsg-2.dsc] I: copying [./ncbi-vdb_2.9.3+dfsg.orig.tar.xz] I: copying [./ncbi-vdb_2.9.3+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jan 15 11:19:04 2019 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ncbi-vdb_2.9.3+dfsg-2.dsc dpkg-source: info: extracting ncbi-vdb in ncbi-vdb-2.9.3+dfsg dpkg-source: info: unpacking ncbi-vdb_2.9.3+dfsg.orig.tar.xz dpkg-source: info: unpacking ncbi-vdb_2.9.3+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debug_configure.patch dpkg-source: info: applying find_hdf5_serial.patch dpkg-source: info: applying find_ngs-sdk.patch dpkg-source: info: applying skip_failing_test.patch dpkg-source: info: applying fix_install_target.patch dpkg-source: info: applying use_debian_packaged_zlib.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying remove_-m64_flag.patch dpkg-source: info: applying add_-msse2.patch dpkg-source: info: applying use_debian_packaged_libmbedx.patch dpkg-source: info: applying mbedtls_ssl_init.patch dpkg-source: info: applying i386-uint64_msbit.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/60382/tmp/hooks/D01_modify_environment starting debug: Running on ionos6-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/60382/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/60382/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.0.3(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=fdb6328391c54fc6b2024789a806cc99 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=60382 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.gmTY7IhyQB/pbuilderrc_2U05 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.gmTY7IhyQB/b2 --logfile b2/build.log ncbi-vdb_2.9.3+dfsg-2.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 5.10.0-8-amd64 #1 SMP Debian 5.10.46-4 (2021-08-03) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1302248 Apr 18 2019 bash -rwxr-xr-x 3 root root 38280 Jul 11 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 11 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore -rwxr-xr-x 1 root root 38692 Mar 1 2019 cat -rwxr-xr-x 1 root root 75588 Mar 1 2019 chgrp -rwxr-xr-x 1 root root 63268 Mar 1 2019 chmod -rwxr-xr-x 1 root root 75588 Mar 1 2019 chown -rwxr-xr-x 1 root root 153732 Mar 1 2019 cp -rwxr-xr-x 1 root root 132820 Jan 18 2019 dash -rwxr-xr-x 1 root root 120676 Mar 1 2019 date -rwxr-xr-x 1 root root 92040 Mar 1 2019 dd -rwxr-xr-x 1 root root 100620 Mar 1 2019 df -rwxr-xr-x 1 root root 149736 Mar 1 2019 dir -rwxr-xr-x 1 root root 79412 Jan 10 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Mar 1 2019 echo -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep -rwxr-xr-x 1 root root 34532 Mar 1 2019 false -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 10 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 23 2020 fusermount -rwxr-xr-x 1 root root 206392 Jan 8 2019 grep -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 6 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 27 2018 hostname -rwxr-xr-x 1 root root 79752 Mar 1 2019 ln -rwxr-xr-x 1 root root 55400 Jul 27 2018 login -rwxr-xr-x 1 root root 149736 Mar 1 2019 ls -rwxr-xr-x 1 root root 112032 Jan 10 2019 lsblk -rwxr-xr-x 1 root root 87972 Mar 1 2019 mkdir -rwxr-xr-x 1 root root 79748 Mar 1 2019 mknod -rwxr-xr-x 1 root root 46916 Mar 1 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 10 2019 more -rwsr-xr-x 1 root root 50592 Jan 10 2019 mount -rwxr-xr-x 1 root root 13724 Jan 10 2019 mountpoint -rwxr-xr-x 1 root root 157832 Mar 1 2019 mv lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Mar 1 2019 pwd lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Mar 1 2019 readlink -rwxr-xr-x 1 root root 75588 Mar 1 2019 rm -rwxr-xr-x 1 root root 42756 Mar 1 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 22 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Oct 22 08:52 sh -> bash lrwxrwxrwx 1 root root 4 Oct 11 04:48 sh.distrib -> dash -rwxr-xr-x 1 root root 34532 Mar 1 2019 sleep -rwxr-xr-x 1 root root 79652 Mar 1 2019 stty -rwsr-xr-x 1 root root 71072 Jan 10 2019 su -rwxr-xr-x 1 root root 34564 Mar 1 2019 sync -rwxr-xr-x 1 root root 504024 Apr 24 2019 tar -rwxr-xr-x 1 root root 13860 Jan 22 2019 tempfile -rwxr-xr-x 1 root root 104292 Mar 1 2019 touch -rwxr-xr-x 1 root root 34532 Mar 1 2019 true -rwxr-xr-x 1 root root 17768 Apr 23 2020 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 10 2019 umount -rwxr-xr-x 1 root root 34532 Mar 1 2019 uname -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress -rwxr-xr-x 1 root root 149736 Mar 1 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 10 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 22 2019 which lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew I: user script /srv/workspace/pbuilder/60382/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), d-shlibs (>= 0.82), libbz2-dev, libxml2-dev, libhdf5-dev, libmagic-dev, libngs-sdk-dev, libngs-java, libmbedtls-dev, zlib1g-dev, default-jdk-headless dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs (>= 0.82); however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libmagic-dev; however: Package libmagic-dev is not installed. pbuilder-satisfydepends-dummy depends on libngs-sdk-dev; however: Package libngs-sdk-dev is not installed. pbuilder-satisfydepends-dummy depends on libngs-java; however: Package libngs-java is not installed. pbuilder-satisfydepends-dummy depends on libmbedtls-dev; however: Package libmbedtls-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on default-jdk-headless; however: Package default-jdk-headless is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} ca-certificates{a} ca-certificates-java{a} d-shlibs{a} debhelper{a} default-jdk-headless{a} default-jre-headless{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} java-common{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libasound2{a} libasound2-data{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbsd0{a} libbz2-dev{a} libcroco3{a} libcups2{a} libdbus-1-3{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103{a} libhdf5-cpp-103{a} libhdf5-dev{a} libicu-dev{a} libicu63{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblcms2-2{a} libmagic-dev{a} libmagic-mgc{a} libmagic1{a} libmbedcrypto3{a} libmbedtls-dev{a} libmbedtls12{a} libmbedx509-0{a} libncurses6{a} libngs-java{a} libngs-sdk-dev{a} libngs-sdk2{a} libnspr4{a} libnss3{a} libpcsclite1{a} libpipeline1{a} libpng16-16{a} libsigsegv2{a} libssl1.1{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} libxml2-dev{a} m4{a} man-db{a} openjdk-11-jdk-headless{a} openjdk-11-jre-headless{a} openssl{a} po-debconf{a} sensible-utils{a} ucf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl dbus krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 92 newly installed, 0 to remove and 0 not upgraded. Need to get 374 MB of archives. After unpacking 628 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2+deb10u1 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3+deb10u1 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u2 [242 kB] Get: 9 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u2 [124 kB] Get: 10 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u2 [66.4 kB] Get: 11 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 12 http://deb.debian.org/debian buster/main i386 ucf all 3.0038+nmu1 [69.0 kB] Get: 13 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 14 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 15 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 16 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 17 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 18 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 19 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u6 [1538 kB] Get: 20 http://deb.debian.org/debian buster/main i386 openssl i386 1.1.1d-0+deb10u6 [854 kB] Get: 21 http://deb.debian.org/debian buster/main i386 ca-certificates all 20200601~deb10u2 [166 kB] Get: 22 http://deb.debian.org/debian buster/main i386 java-common all 0.71 [14.4 kB] Get: 23 http://deb.debian.org/debian buster/main i386 libavahi-common-data i386 0.7-4+deb10u1 [122 kB] Get: 24 http://deb.debian.org/debian buster/main i386 libavahi-common3 i386 0.7-4+deb10u1 [56.1 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libdbus-1-3 i386 1.12.20-0+deb10u1 [227 kB] Get: 26 http://deb.debian.org/debian buster/main i386 libavahi-client3 i386 0.7-4+deb10u1 [60.3 kB] Get: 27 http://deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 28 http://deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3+deb10u1 [68.7 kB] Get: 29 http://deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3+deb10u1 [126 kB] Get: 30 http://deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3+deb10u1 [395 kB] Get: 31 http://deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3+deb10u1 [168 kB] Get: 32 http://deb.debian.org/debian buster/main i386 libcups2 i386 2.2.10-6+deb10u4 [338 kB] Get: 33 http://deb.debian.org/debian buster/main i386 liblcms2-2 i386 2.9-3 [156 kB] Get: 34 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo i386 1:1.5.2-2+deb10u1 [142 kB] Get: 35 http://deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2+deb10u1 [104 kB] Get: 36 http://deb.debian.org/debian buster/main i386 libpng16-16 i386 1.6.36-6 [301 kB] Get: 37 http://deb.debian.org/debian buster/main i386 libfreetype6 i386 2.9.1-3+deb10u2 [395 kB] Get: 38 http://deb.debian.org/debian buster/main i386 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 39 http://deb.debian.org/debian buster/main i386 fontconfig-config all 2.13.1-2 [280 kB] Get: 40 http://deb.debian.org/debian buster/main i386 libfontconfig1 i386 2.13.1-2 [357 kB] Get: 41 http://deb.debian.org/debian buster/main i386 libnspr4 i386 2:4.20-1 [122 kB] Get: 42 http://deb.debian.org/debian buster/main i386 libnss3 i386 2:3.42.1-1+deb10u3 [1239 kB] Get: 43 http://deb.debian.org/debian buster/main i386 libasound2-data all 1.1.8-1 [59.6 kB] Get: 44 http://deb.debian.org/debian buster/main i386 libasound2 i386 1.1.8-1 [382 kB] Get: 45 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u3 [1334 kB] Get: 46 http://deb.debian.org/debian buster/main i386 libgraphite2-3 i386 1.3.13-7 [84.0 kB] Get: 47 http://deb.debian.org/debian buster/main i386 libharfbuzz0b i386 2.3.1-1 [1209 kB] Get: 48 http://deb.debian.org/debian buster/main i386 libpcsclite1 i386 1.8.24-1 [60.0 kB] Get: 49 http://deb.debian.org/debian buster/main i386 openjdk-11-jre-headless i386 11.0.11+9-1~deb10u1 [36.8 MB] Get: 50 http://deb.debian.org/debian buster/main i386 default-jre-headless i386 2:1.11-71 [10.9 kB] Get: 51 http://deb.debian.org/debian buster/main i386 ca-certificates-java all 20190405 [15.7 kB] Get: 52 http://deb.debian.org/debian buster/main i386 d-shlibs all 0.84 [17.2 kB] Get: 53 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 54 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 55 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 56 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 57 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 58 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 59 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 60 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 61 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+deb10u2 [723 kB] Get: 62 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 63 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 64 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 65 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 66 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 67 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 68 http://deb.debian.org/debian buster/main i386 openjdk-11-jdk-headless i386 11.0.11+9-1~deb10u1 [291 MB] Get: 69 http://deb.debian.org/debian buster/main i386 default-jdk-headless i386 2:1.11-71 [1104 B] Get: 70 http://deb.debian.org/debian buster/main i386 hdf5-helpers i386 1.10.4+repack-10 [35.2 kB] Get: 71 http://deb.debian.org/debian buster/main i386 icu-devtools i386 63.1-6+deb10u1 [196 kB] Get: 72 http://deb.debian.org/debian buster/main i386 libaec0 i386 1.0.2-1 [22.6 kB] Get: 73 http://deb.debian.org/debian buster/main i386 libsz2 i386 1.0.2-1 [6720 B] Get: 74 http://deb.debian.org/debian buster/main i386 libaec-dev i386 1.0.2-1 [21.4 kB] Get: 75 http://deb.debian.org/debian buster/main i386 libbz2-dev i386 1.0.6-9.2~deb10u1 [31.2 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libgfortran5 i386 8.3.0-6 [549 kB] Get: 77 http://deb.debian.org/debian buster/main i386 libhdf5-103 i386 1.10.4+repack-10 [1310 kB] Get: 78 http://deb.debian.org/debian buster/main i386 libhdf5-cpp-103 i386 1.10.4+repack-10 [155 kB] Get: 79 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Get: 80 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo-dev i386 1:1.5.2-2+deb10u1 [227 kB] Get: 81 http://deb.debian.org/debian buster/main i386 libjpeg-dev all 1:1.5.2-2+deb10u1 [57.7 kB] Get: 82 http://deb.debian.org/debian buster/main i386 libhdf5-dev i386 1.10.4+repack-10 [2738 kB] Get: 83 http://deb.debian.org/debian buster/main i386 libicu-dev i386 63.1-6+deb10u1 [9377 kB] Get: 84 http://deb.debian.org/debian buster/main i386 libmagic-dev i386 1:5.35-4+deb10u2 [138 kB] Get: 85 http://deb.debian.org/debian buster/main i386 libmbedcrypto3 i386 2.16.0-1 [222 kB] Get: 86 http://deb.debian.org/debian buster/main i386 libmbedx509-0 i386 2.16.0-1 [93.0 kB] Get: 87 http://deb.debian.org/debian buster/main i386 libmbedtls12 i386 2.16.0-1 [133 kB] Get: 88 http://deb.debian.org/debian buster/main i386 libmbedtls-dev i386 2.16.0-1 [512 kB] Get: 89 http://deb.debian.org/debian buster/main i386 libngs-sdk2 i386 2.9.3-1 [65.2 kB] Get: 90 http://deb.debian.org/debian buster/main i386 libngs-sdk-dev i386 2.9.3-1 [122 kB] Get: 91 http://deb.debian.org/debian buster/main i386 libngs-java i386 2.9.3-1 [79.9 kB] Get: 92 http://deb.debian.org/debian buster/main i386 libxml2-dev i386 2.9.4+dfsg1-7+deb10u2 [845 kB] Fetched 374 MB in 8s (49.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2+deb10u1_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3+deb10u1_i386.deb ... Unpacking groff-base (1.22.4-3+deb10u1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../04-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.35-4+deb10u2_i386.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u2) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../08-libmagic1_1%3a5.35-4+deb10u2_i386.deb ... Unpacking libmagic1:i386 (1:5.35-4+deb10u2) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.35-4+deb10u2_i386.deb ... Unpacking file (1:5.35-4+deb10u2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package ucf. Preparing to unpack .../11-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../12-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.18-2_i386.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. 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Preparing to unpack .../21-java-common_0.71_all.deb ... Unpacking java-common (0.71) ... Selecting previously unselected package libavahi-common-data:i386. Preparing to unpack .../22-libavahi-common-data_0.7-4+deb10u1_i386.deb ... Unpacking libavahi-common-data:i386 (0.7-4+deb10u1) ... Selecting previously unselected package libavahi-common3:i386. Preparing to unpack .../23-libavahi-common3_0.7-4+deb10u1_i386.deb ... Unpacking libavahi-common3:i386 (0.7-4+deb10u1) ... Selecting previously unselected package libdbus-1-3:i386. Preparing to unpack .../24-libdbus-1-3_1.12.20-0+deb10u1_i386.deb ... Unpacking libdbus-1-3:i386 (1.12.20-0+deb10u1) ... Selecting previously unselected package libavahi-client3:i386. Preparing to unpack .../25-libavahi-client3_0.7-4+deb10u1_i386.deb ... Unpacking libavahi-client3:i386 (0.7-4+deb10u1) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../26-libkeyutils1_1.6-6_i386.deb ... Unpacking libkeyutils1:i386 (1.6-6) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../27-libkrb5support0_1.17-3+deb10u1_i386.deb ... Unpacking libkrb5support0:i386 (1.17-3+deb10u1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../28-libk5crypto3_1.17-3+deb10u1_i386.deb ... Unpacking libk5crypto3:i386 (1.17-3+deb10u1) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../29-libkrb5-3_1.17-3+deb10u1_i386.deb ... Unpacking libkrb5-3:i386 (1.17-3+deb10u1) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../30-libgssapi-krb5-2_1.17-3+deb10u1_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.17-3+deb10u1) ... Selecting previously unselected package libcups2:i386. Preparing to unpack .../31-libcups2_2.2.10-6+deb10u4_i386.deb ... Unpacking libcups2:i386 (2.2.10-6+deb10u4) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../32-liblcms2-2_2.9-3_i386.deb ... Unpacking liblcms2-2:i386 (2.9-3) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../33-libjpeg62-turbo_1%3a1.5.2-2+deb10u1_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:1.5.2-2+deb10u1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../34-libexpat1_2.2.6-2+deb10u1_i386.deb ... Unpacking libexpat1:i386 (2.2.6-2+deb10u1) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../35-libpng16-16_1.6.36-6_i386.deb ... Unpacking libpng16-16:i386 (1.6.36-6) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../36-libfreetype6_2.9.1-3+deb10u2_i386.deb ... Unpacking libfreetype6:i386 (2.9.1-3+deb10u2) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../37-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. 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Unpacking default-jre-headless (2:1.11-71) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../50-ca-certificates-java_20190405_all.deb ... Unpacking ca-certificates-java (20190405) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../51-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../52-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../53-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../54-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../55-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../56-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../57-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../58-dwz_0.12-3_i386.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libicu63:i386. Preparing to unpack .../59-libicu63_63.1-6+deb10u1_i386.deb ... Unpacking libicu63:i386 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../60-libxml2_2.9.4+dfsg1-7+deb10u2_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-7+deb10u2) ... Selecting previously unselected package libcroco3:i386. Preparing to unpack .../61-libcroco3_0.6.12-3_i386.deb ... Unpacking libcroco3:i386 (0.6.12-3) ... Selecting previously unselected package libncurses6:i386. Preparing to unpack .../62-libncurses6_6.1+20181013-2+deb10u2_i386.deb ... Unpacking libncurses6:i386 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package gettext. Preparing to unpack .../63-gettext_0.19.8.1-9_i386.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../64-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../65-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../66-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package openjdk-11-jdk-headless:i386. Preparing to unpack .../67-openjdk-11-jdk-headless_11.0.11+9-1~deb10u1_i386.deb ... Unpacking openjdk-11-jdk-headless:i386 (11.0.11+9-1~deb10u1) ... Selecting previously unselected package default-jdk-headless. Preparing to unpack .../68-default-jdk-headless_2%3a1.11-71_i386.deb ... Unpacking default-jdk-headless (2:1.11-71) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../69-hdf5-helpers_1.10.4+repack-10_i386.deb ... Unpacking hdf5-helpers (1.10.4+repack-10) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../70-icu-devtools_63.1-6+deb10u1_i386.deb ... Unpacking icu-devtools (63.1-6+deb10u1) ... Selecting previously unselected package libaec0:i386. Preparing to unpack .../71-libaec0_1.0.2-1_i386.deb ... Unpacking libaec0:i386 (1.0.2-1) ... Selecting previously unselected package libsz2:i386. Preparing to unpack .../72-libsz2_1.0.2-1_i386.deb ... Unpacking libsz2:i386 (1.0.2-1) ... Selecting previously unselected package libaec-dev:i386. Preparing to unpack .../73-libaec-dev_1.0.2-1_i386.deb ... Unpacking libaec-dev:i386 (1.0.2-1) ... Selecting previously unselected package libbz2-dev:i386. Preparing to unpack .../74-libbz2-dev_1.0.6-9.2~deb10u1_i386.deb ... Unpacking libbz2-dev:i386 (1.0.6-9.2~deb10u1) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../75-libgfortran5_8.3.0-6_i386.deb ... Unpacking libgfortran5:i386 (8.3.0-6) ... Selecting previously unselected package libhdf5-103:i386. Preparing to unpack .../76-libhdf5-103_1.10.4+repack-10_i386.deb ... Unpacking libhdf5-103:i386 (1.10.4+repack-10) ... Selecting previously unselected package libhdf5-cpp-103:i386. Preparing to unpack .../77-libhdf5-cpp-103_1.10.4+repack-10_i386.deb ... Unpacking libhdf5-cpp-103:i386 (1.10.4+repack-10) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../78-zlib1g-dev_1%3a1.2.11.dfsg-1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Selecting previously unselected package libjpeg62-turbo-dev:i386. Preparing to unpack .../79-libjpeg62-turbo-dev_1%3a1.5.2-2+deb10u1_i386.deb ... Unpacking libjpeg62-turbo-dev:i386 (1:1.5.2-2+deb10u1) ... Selecting previously unselected package libjpeg-dev. Preparing to unpack .../80-libjpeg-dev_1%3a1.5.2-2+deb10u1_all.deb ... Unpacking libjpeg-dev (1:1.5.2-2+deb10u1) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../81-libhdf5-dev_1.10.4+repack-10_i386.deb ... Unpacking libhdf5-dev (1.10.4+repack-10) ... Selecting previously unselected package libicu-dev:i386. Preparing to unpack .../82-libicu-dev_63.1-6+deb10u1_i386.deb ... Unpacking libicu-dev:i386 (63.1-6+deb10u1) ... Selecting previously unselected package libmagic-dev:i386. Preparing to unpack .../83-libmagic-dev_1%3a5.35-4+deb10u2_i386.deb ... Unpacking libmagic-dev:i386 (1:5.35-4+deb10u2) ... Selecting previously unselected package libmbedcrypto3:i386. Preparing to unpack .../84-libmbedcrypto3_2.16.0-1_i386.deb ... Unpacking libmbedcrypto3:i386 (2.16.0-1) ... Selecting previously unselected package libmbedx509-0:i386. Preparing to unpack .../85-libmbedx509-0_2.16.0-1_i386.deb ... Unpacking libmbedx509-0:i386 (2.16.0-1) ... Selecting previously unselected package libmbedtls12:i386. Preparing to unpack .../86-libmbedtls12_2.16.0-1_i386.deb ... Unpacking libmbedtls12:i386 (2.16.0-1) ... Selecting previously unselected package libmbedtls-dev:i386. Preparing to unpack .../87-libmbedtls-dev_2.16.0-1_i386.deb ... Unpacking libmbedtls-dev:i386 (2.16.0-1) ... Selecting previously unselected package libngs-sdk2. Preparing to unpack .../88-libngs-sdk2_2.9.3-1_i386.deb ... Unpacking libngs-sdk2 (2.9.3-1) ... Selecting previously unselected package libngs-sdk-dev. Preparing to unpack .../89-libngs-sdk-dev_2.9.3-1_i386.deb ... Unpacking libngs-sdk-dev (2.9.3-1) ... Selecting previously unselected package libngs-java. Preparing to unpack .../90-libngs-java_2.9.3-1_i386.deb ... Unpacking libngs-java (2.9.3-1) ... Selecting previously unselected package libxml2-dev:i386. Preparing to unpack .../91-libxml2-dev_2.9.4+dfsg1-7+deb10u2_i386.deb ... Unpacking libxml2-dev:i386 (2.9.4+dfsg1-7+deb10u2) ... Setting up libexpat1:i386 (2.2.6-2+deb10u1) ... Setting up libpipeline1:i386 (1.5.1-2) ... Setting up libgraphite2-3:i386 (1.3.13-7) ... Setting up liblcms2-2:i386 (2.9-3) ... Setting up libkeyutils1:i386 (1.6-6) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up java-common (0.71) ... Setting up libmagic-mgc (1:5.35-4+deb10u2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:i386 (2.58.3-2+deb10u3) ... No schema files found: doing nothing. Setting up libssl1.1:i386 (1.1.1d-0+deb10u6) ... Setting up libmagic1:i386 (1:5.35-4+deb10u2) ... Setting up libngs-sdk2 (2.9.3-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u2) ... Setting up libmagic-dev:i386 (1:5.35-4+deb10u2) ... Setting up libaec0:i386 (1.0.2-1) ... Setting up libicu63:i386 (63.1-6+deb10u1) ... Setting up libkrb5support0:i386 (1.17-3+deb10u1) ... Setting up libasound2-data (1.1.8-1) ... Setting up autotools-dev (20180224.1) ... Setting up libjpeg62-turbo:i386 (1:1.5.2-2+deb10u1) ... Setting up libjpeg62-turbo-dev:i386 (1:1.5.2-2+deb10u1) ... Setting up libnspr4:i386 (2:4.20-1) ... Setting up libavahi-common-data:i386 (0.7-4+deb10u1) ... Setting up libncurses6:i386 (6.1+20181013-2+deb10u2) ... Setting up libdbus-1-3:i386 (1.12.20-0+deb10u1) ... Setting up libsigsegv2:i386 (2.12-2) ... Setting up libpng16-16:i386 (1.6.36-6) ... Setting up autopoint (0.19.8.1-9) ... Setting up icu-devtools (63.1-6+deb10u1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up d-shlibs (0.84) ... Setting up libngs-sdk-dev (2.9.3-1) ... Setting up libpcsclite1:i386 (1.8.24-1) ... Setting up libk5crypto3:i386 (1.17-3+deb10u1) ... Setting up libgfortran5:i386 (8.3.0-6) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libasound2:i386 (1.1.8-1) ... Setting up libmbedcrypto3:i386 (2.16.0-1) ... Setting up libkrb5-3:i386 (1.17-3+deb10u1) ... Setting up libngs-java (2.9.3-1) ... Setting up openssl (1.1.1d-0+deb10u6) ... Setting up libbsd0:i386 (0.9.1-2+deb10u1) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up libicu-dev:i386 (63.1-6+deb10u1) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+deb10u2) ... Setting up libsz2:i386 (1.0.2-1) ... Setting up libbz2-dev:i386 (1.0.6-9.2~deb10u1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libtool (2.4.6-9) ... Setting up libmbedx509-0:i386 (2.16.0-1) ... Setting up libmbedtls12:i386 (2.16.0-1) ... Setting up libaec-dev:i386 (1.0.2-1) ... Setting up libavahi-common3:i386 (0.7-4+deb10u1) ... Setting up libjpeg-dev (1:1.5.2-2+deb10u1) ... Setting up m4 (1.4.18-2) ... Setting up libnss3:i386 (2:3.42.1-1+deb10u3) ... Setting up libmbedtls-dev:i386 (2.16.0-1) ... Setting up ca-certificates (20200601~deb10u2) ... Updating certificates in /etc/ssl/certs... 137 added, 0 removed; done. Setting up libxml2-dev:i386 (2.9.4+dfsg1-7+deb10u2) ... Setting up libfreetype6:i386 (2.9.1-3+deb10u2) ... Setting up libhdf5-103:i386 (1.10.4+repack-10) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:i386 (1.17-3+deb10u1) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3+deb10u1) ... Setting up libharfbuzz0b:i386 (2.3.1-1) ... Setting up libavahi-client3:i386 (0.7-4+deb10u1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libhdf5-cpp-103:i386 (1.10.4+repack-10) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libcups2:i386 (2.2.10-6+deb10u4) ... Setting up libfontconfig1:i386 (2.13.1-2) ... Setting up po-debconf (1.0.21) ... Setting up dh-autoreconf (19) ... Setting up default-jre-headless (2:1.11-71) ... Setting up openjdk-11-jre-headless:i386 (11.0.11+9-1~deb10u1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode OpenJDK Client VM warning: Ignoring option PermSize; support was removed in 8.0 Setting up debhelper (12.1.1) ... Setting up openjdk-11-jdk-headless:i386 (11.0.11+9-1~deb10u1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jdk-headless (2:1.11-71) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up ca-certificates-java (20190405) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:DigiCert_Global_Root_G3.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:DST_Root_CA_X3.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:GTS_Root_R1.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:EC-ACC.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:Certigna.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:ISRG_Root_X1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:Taiwan_GRCA.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:AffirmTrust_Premium.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:Izenpe.com.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:thawte_Primary_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:GeoTrust_Universal_CA.pem Adding debian:AffirmTrust_Networking.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:ACCVRAIZ1.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:LuxTrust_Global_Root_2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:GTS_Root_R2.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:GTS_Root_R4.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Certigna_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:thawte_Primary_Root_CA_-_G2.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:GeoTrust_Primary_Certification_Authority.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:GeoTrust_Global_CA.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:TrustCor_ECA-1.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:Secure_Global_CA.pem Adding debian:thawte_Primary_Root_CA_-_G3.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:SecureTrust_CA.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:SecureSign_RootCA11.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:GTS_Root_R3.pem done. Processing triggers for libc-bin (2.28-10) ... Processing triggers for ca-certificates (20200601~deb10u2) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package hostname: Name or service not known I: Running cd /build/ncbi-vdb-2.9.3+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-vdb_2.9.3+dfsg-2_source.changes dpkg-buildpackage: info: source package ncbi-vdb dpkg-buildpackage: info: source version 2.9.3+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg' if [ -e ngs-sdk/Makefile.config.linux.i686 ] ; then \ dh_auto_clean ; \ fi rm -rf ncbi-vdb/i386-linux-gnu make[1]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg' dh_clean debian/rules build make: 'build' is up to date. fakeroot debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg' # that's no standard configure script lacking support of default options # The build system shamelessly ignores those options like # --with-ngs-java-prefix=/usr/share/java # so we need to go with patches. The options are specified anyway. ln -s /usr/lib/jvm/default-java/include/jni.h libs/ngs-jni ln -s /usr/lib/jvm/default-java/include/linux/jni_md.h libs/ngs-jni ./configure --build=i386-linux-gnu --prefix=/usr --build-prefix=/build/ncbi-vdb-2.9.3+dfsg/debian/tmp/usr --with-ngs-sdk-prefix=/usr --with-debug --with-ngs-java-prefix=/usr/share/java Configuring NCBI-VDB package checking system type... Linux checking OS distributor... checking machine architecture... x86_64 checking for supported architecture... x86_64 (64 bits) is supported checking for supported OS... Linux (linux) is supported checking for supported tool chain... gcc tool chain is supported checking for g++... yes checking whether gcc accepts -Wno-array-bounds... yes checking whether g++ accepts -static-libstdc++... yes checking for fuse library... :1:10: fatal error: fuse.h: No such file or directory compilation terminated. running echo -e '#include \n int main() { fuse_get_context(); }\n' | gcc -xc -D_FILE_OFFSET_BITS=64 -I/usr/include - -lfuse no checking for hdf5 library... running echo -e '#include \n int main() { H5close (); }\n' | gcc -xc -I/usr/include - -lhdf5_serial -Wl,-Bdynamic -ldl -lm -lz yes HAVE_HDF5 = 1 HDF5_INCDIR = /usr/include checking for magic library... running echo -e '#include \n int main() { magic_open (0); }\n' | gcc -xc -I/usr/include - -lmagic yes HAVE_MAGIC = 1 MAGIC_INCDIR = /usr/include checking for xml2 library... running echo -e '#include \nint main() { xmlInitParser ( ); }\n' | gcc -xc -I/usr/include/libxml2 - -lxml2 yes HAVE_XML2 = 1 XML2_INCDIR = /usr/include/libxml2 checking for ngs-sdk package... includes... /usr libraries... checking /usr/lib/i386-linux-gnu/libngs-sdk.so /usr/lib/i386-linux-gnu includes: /usr/include libraries: /usr/lib/i386-linux-gnu checking for ngs-java package... jar... (seeking for ngs-java.jar in dir /usr/share/java)/usr/share/java/ngs-java.jar jar: /usr/share/java/ngs-java-2.9.3.jar configure: creating 'build/ld.linux.exe_cmd.sh' configure: creating 'build/Makefile.config.linux.x86_64' configure: creating 'Makefile.config' configure: creating 'reconfigure' build type: debug build prefix: /build/ncbi-vdb-2.9.3+dfsg/debian/tmp/usr/ncbi-vdb build output path: /build/ncbi-vdb-2.9.3+dfsg/debian/tmp/usr/ncbi-vdb/linux/gcc/x86_64/dbg includedir: /usr/include bindir: /usr/bin libdir: /usr/lib CC = gcc -c CPP = g++ configured with: "'--build=i386-linux-gnu' '--prefix=/usr' '--build-prefix=/build/ncbi-vdb-2.9.3+dfsg/debian/tmp/usr' '--with-ngs-sdk-prefix=/usr' '--with-debug' '--with-ngs-java-prefix=/usr/share/java'" # no idea how to convince configure script to use the correct include dir so patching result afterwards sed -i 's?HDF5_INCDIR = /usr/include?&/hdf5/serial?' build/Makefile.config* make[1]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg' debian/rules override_dh_auto_build make[1]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg' dh_auto_build --no-parallel make -j1 make[2]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg' make[3]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg/libs' make[4]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg/libs/kfc' make[5]: Entering directory '/build/ncbi-vdb-2.9.3+dfsg/debian/tmp/usr/ncbi-vdb/linux/gcc/x86_64/dbg/obj/libs/kfc' gcc -c -std=gnu11 -D_DEBUGGING -g -std=gnu11 -pedantic -DLINUX -DUNIX -D_GNU_SOURCE -D_REENTRANT -D_FILE_OFFSET_BITS=64 -DPKGNAME=linux64 -D_ARCH_BITS=__SIZEOF_POINTER__*__CHAR_BIT__ -DLIBPREFIX=lib -DSHLIBEXT=so -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/override -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/linux -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/unix -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64 -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/linux -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/unix -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/ext -I/usr/include -I. -MD -o refcount.pic.o -fPIC -Wall -Wno-long-long -Wno-variadic-macros -Wno-variadic-macros -fno-strict-aliasing -fstack-protector -Wa,--noexecstack -Wall -D_LIBRARY /build/ncbi-vdb-2.9.3+dfsg/libs/kfc/refcount.c -D__mod_name__=libs/kfc -D__file_name__=refcount -D__file_ext__=c gcc -c -std=gnu11 -D_DEBUGGING -g -std=gnu11 -pedantic -DLINUX -DUNIX -D_GNU_SOURCE -D_REENTRANT -D_FILE_OFFSET_BITS=64 -DPKGNAME=linux64 -D_ARCH_BITS=__SIZEOF_POINTER__*__CHAR_BIT__ -DLIBPREFIX=lib -DSHLIBEXT=so -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/override -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/linux -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/unix -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64 -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/linux -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/unix -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/ext -I/usr/include -I. -MD -o tstate.pic.o -fPIC -Wall -Wno-long-long -Wno-variadic-macros -Wno-variadic-macros -fno-strict-aliasing -fstack-protector -Wa,--noexecstack -Wall -D_LIBRARY /build/ncbi-vdb-2.9.3+dfsg/libs/kfc/tstate.c -D__mod_name__=libs/kfc -D__file_name__=tstate -D__file_ext__=c gcc -c -std=gnu11 -D_DEBUGGING -g -std=gnu11 -pedantic -DLINUX -DUNIX -D_GNU_SOURCE -D_REENTRANT -D_FILE_OFFSET_BITS=64 -DPKGNAME=linux64 -D_ARCH_BITS=__SIZEOF_POINTER__*__CHAR_BIT__ -DLIBPREFIX=lib -DSHLIBEXT=so -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/override -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/linux -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/unix -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64 -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/linux -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/unix -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/ext -I/usr/include -I. -MD -o sysrsrc.pic.o -fPIC -Wall -Wno-long-long -Wno-variadic-macros -Wno-variadic-macros -fno-strict-aliasing -fstack-protector -Wa,--noexecstack -Wall -D_LIBRARY /build/ncbi-vdb-2.9.3+dfsg/libs/kfc/unix/sysrsrc.c -D__mod_name__=libs/kfc -D__file_name__=sysrsrc -D__file_ext__=c gcc -c -std=gnu11 -D_DEBUGGING -g -std=gnu11 -pedantic -DLINUX -DUNIX -D_GNU_SOURCE -D_REENTRANT -D_FILE_OFFSET_BITS=64 -DPKGNAME=linux64 -D_ARCH_BITS=__SIZEOF_POINTER__*__CHAR_BIT__ -DLIBPREFIX=lib -DSHLIBEXT=so -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/override -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/linux -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/unix -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64 -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/linux -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/unix -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/ext -I/usr/include -I. -MD -o rsrc.pic.o -fPIC -Wall -Wno-long-long -Wno-variadic-macros -Wno-variadic-macros -fno-strict-aliasing -fstack-protector -Wa,--noexecstack -Wall -D_LIBRARY /build/ncbi-vdb-2.9.3+dfsg/libs/kfc/rsrc.c -D__mod_name__=libs/kfc -D__file_name__=rsrc -D__file_ext__=c gcc -c -std=gnu11 -D_DEBUGGING -g -std=gnu11 -pedantic -DLINUX -DUNIX -D_GNU_SOURCE -D_REENTRANT -D_FILE_OFFSET_BITS=64 -DPKGNAME=linux64 -D_ARCH_BITS=__SIZEOF_POINTER__*__CHAR_BIT__ -DLIBPREFIX=lib -DSHLIBEXT=so -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/override -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/linux -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc/unix -I/build/ncbi-vdb-2.9.3+dfsg/libs/kfc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64 -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/linux -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/os/unix -I/build/ncbi-vdb-2.9.3+dfsg/interfaces/ext -I/usr/include -I. -MD -o vtbl.pic.o -fPIC -Wall -Wno-long-long -Wno-variadic-macros -Wno-variadic-macros -fno-strict-aliasing -fstack-protector -Wa,--noexecstack -Wall -D_LIBRARY /build/ncbi-vdb-2.9.3+dfsg/libs/kfc/vtbl.c -D__mod_name__=libs/kfc -D__file_name__=vtbl -D__file_ext__=c /build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64/atomic.h: Assembler messages: /build/ncbi-vdb-2.9.3+dfsg/interfaces/cc/gcc/x86_64/atomic.h:112: Error: bad register name `%rsi' make[5]: *** [/build/ncbi-vdb-2.9.3+dfsg/build/Makefile.rules:47: vtbl.pic.o] Error 1 make[5]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg/debian/tmp/usr/ncbi-vdb/linux/gcc/x86_64/dbg/obj/libs/kfc' make[4]: *** [/build/ncbi-vdb-2.9.3+dfsg/build/Makefile.env:137: stdcompile] Error 2 make[4]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg/libs/kfc' make[3]: *** [Makefile:82: kfc] Error 2 make[3]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg/libs' make[2]: *** [Makefile:47: libs] Error 2 make[2]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg' dh_auto_build: make -j1 returned exit code 2 make[1]: *** [debian/rules:46: override_dh_auto_build] Error 2 make[1]: Leaving directory '/build/ncbi-vdb-2.9.3+dfsg' make: *** [debian/rules:26: binary] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: user script /srv/workspace/pbuilder/60382/tmp/hooks/C01_cleanup starting debug output: disk usage on i-capture-the-hostname at Fri Oct 21 18:53:13 UTC 2022 Filesystem Size Used Avail Use% Mounted on tmpfs 3.9G 0 3.9G 0% /dev/shm I: user script /srv/workspace/pbuilder/60382/tmp/hooks/C01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/60382 and its subdirectories