I: pbuilder: network access will be disabled during build I: Current time: Thu May 7 12:49:35 -12 2020 I: pbuilder-time-stamp: 1588898975 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [maffilter_1.3.1+dfsg-1.dsc] I: copying [./maffilter_1.3.1+dfsg.orig.tar.xz] I: copying [./maffilter_1.3.1+dfsg-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Aug 23 08:10:02 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./maffilter_1.3.1+dfsg-1.dsc dpkg-source: info: extracting maffilter in maffilter-1.3.1+dfsg dpkg-source: info: unpacking maffilter_1.3.1+dfsg.orig.tar.xz dpkg-source: info: unpacking maffilter_1.3.1+dfsg-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), cmake, texinfo, libbpp-phyl-omics-dev (>= 2.4.1), libboost-iostreams-dev (>= 1.54.0), zlib1g-dev, libbz2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on texinfo; however: Package texinfo is not installed. pbuilder-satisfydepends-dummy depends on libbpp-phyl-omics-dev (>= 2.4.1); however: Package libbpp-phyl-omics-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev (>= 1.54.0); however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-iostreams-dev{a} libboost-iostreams1.67-dev{a} libboost-regex1.67-dev{a} libboost-regex1.67.0{a} libboost1.67-dev{a} libbpp-core-dev{a} libbpp-core4{a} libbpp-phyl-dev{a} libbpp-phyl-omics-dev{a} libbpp-phyl-omics3{a} libbpp-phyl12{a} libbpp-seq-dev{a} libbpp-seq-omics-dev{a} libbpp-seq-omics3{a} libbpp-seq12{a} libbsd0{a} libbz2-dev{a} libcroco3{a} libcurl4{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libgssapi-krb5-2{a} libicu-dev{a} libicu63{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.4-2{a} libldap-common{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libprocps7{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libssl1.1{a} libtext-unidecode-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml2{a} lsb-base{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} tex-common{a} texinfo{a} ucf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libsasl2-modules libwww-perl libxml-sax-expat-perl lynx psmisc publicsuffix shared-mime-info wget xdg-user-dirs 0 packages upgraded, 85 newly installed, 0 to remove and 0 not upgraded. Need to get 59.4 MB of archives. After unpacking 366 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://deb.debian.org/debian buster/main i386 ucf all 3.0038+nmu1 [69.0 kB] Get: 9 http://deb.debian.org/debian buster/main i386 tex-common all 6.11 [53.1 kB] Get: 10 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 11 http://deb.debian.org/debian buster/main i386 libprocps7 i386 2:3.3.15-2 [62.7 kB] Get: 12 http://deb.debian.org/debian buster/main i386 lsb-base all 10.2019051400 [28.4 kB] Get: 13 http://deb.debian.org/debian buster/main i386 procps i386 2:3.3.15-2 [259 kB] Get: 14 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u1 [242 kB] Get: 15 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u1 [124 kB] Get: 16 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u1 [66.3 kB] Get: 17 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 18 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 19 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 20 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 21 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 22 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 23 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 24 http://deb.debian.org/debian buster/main i386 cmake-data all 3.13.4-1 [1476 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6 [8443 kB] Get: 26 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 27 http://deb.debian.org/debian buster/main i386 libarchive13 i386 3.3.3-4+deb10u1 [351 kB] Get: 28 http://deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 29 http://deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3 [68.6 kB] Get: 30 http://deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3 [126 kB] Get: 31 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u2 [1538 kB] Get: 32 http://deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3 [396 kB] Get: 33 http://deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3 [168 kB] Get: 34 http://deb.debian.org/debian buster/main i386 libsasl2-modules-db i386 2.1.27+dfsg-1+deb10u1 [70.1 kB] Get: 35 http://deb.debian.org/debian buster/main i386 libsasl2-2 i386 2.1.27+dfsg-1+deb10u1 [110 kB] Get: 36 http://deb.debian.org/debian buster/main i386 libldap-common all 2.4.47+dfsg-3+deb10u1 [89.6 kB] Get: 37 http://deb.debian.org/debian buster/main i386 libldap-2.4-2 i386 2.4.47+dfsg-3+deb10u1 [236 kB] Get: 38 http://deb.debian.org/debian buster/main i386 libnghttp2-14 i386 1.36.0-2+deb10u1 [90.3 kB] Get: 39 http://deb.debian.org/debian buster/main i386 libpsl5 i386 0.20.2-2 [54.4 kB] Get: 40 http://deb.debian.org/debian buster/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2 [64.2 kB] Get: 41 http://deb.debian.org/debian buster/main i386 libssh2-1 i386 1.8.0-2.1 [147 kB] Get: 42 http://deb.debian.org/debian buster/main i386 libcurl4 i386 7.64.0-4 [358 kB] Get: 43 http://deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2+deb10u1 [104 kB] Get: 44 http://deb.debian.org/debian buster/main i386 libjsoncpp1 i386 1.7.4-3 [85.0 kB] Get: 45 http://deb.debian.org/debian buster/main i386 librhash0 i386 1.3.8-1 [135 kB] Get: 46 http://deb.debian.org/debian buster/main i386 libuv1 i386 1.24.1-1 [116 kB] Get: 47 http://deb.debian.org/debian buster/main i386 cmake i386 3.13.4-1 [3747 kB] Get: 48 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 49 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 50 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 51 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 52 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 53 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 54 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 55 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u2 [1334 kB] Get: 56 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 57 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 58 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 59 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 60 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 61 http://deb.debian.org/debian buster/main i386 icu-devtools i386 63.1-6 [196 kB] Get: 62 http://deb.debian.org/debian buster/main i386 libboost1.67-dev i386 1.67.0-13+deb10u1 [8388 kB] Get: 63 http://deb.debian.org/debian buster/main i386 libboost-regex1.67.0 i386 1.67.0-13+deb10u1 [508 kB] Get: 64 http://deb.debian.org/debian buster/main i386 libicu-dev i386 63.1-6 [9374 kB] Get: 65 http://deb.debian.org/debian buster/main i386 libboost-regex1.67-dev i386 1.67.0-13+deb10u1 [561 kB] Get: 66 http://deb.debian.org/debian buster/main i386 libboost-iostreams1.67-dev i386 1.67.0-13+deb10u1 [258 kB] Get: 67 http://deb.debian.org/debian buster/main i386 libboost-iostreams-dev i386 1.67.0.1 [3632 B] Get: 68 http://deb.debian.org/debian buster/main i386 libbpp-core4 i386 2.4.1-3 [641 kB] Get: 69 http://deb.debian.org/debian buster/main i386 libbpp-core-dev i386 2.4.1-3 [998 kB] Get: 70 http://deb.debian.org/debian buster/main i386 libbpp-seq12 i386 2.4.1-3 [539 kB] Get: 71 http://deb.debian.org/debian buster/main i386 libbpp-phyl12 i386 2.4.1-2 [1670 kB] Get: 72 http://deb.debian.org/debian buster/main i386 libbpp-seq-dev i386 2.4.1-3 [794 kB] Get: 73 http://deb.debian.org/debian buster/main i386 libbpp-phyl-dev i386 2.4.1-2 [3054 kB] Get: 74 http://deb.debian.org/debian buster/main i386 libbpp-seq-omics3 i386 2.4.1-3 [239 kB] Get: 75 http://deb.debian.org/debian buster/main i386 libbpp-phyl-omics3 i386 2.4.1-1 [73.8 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libbpp-seq-omics-dev i386 2.4.1-3 [405 kB] Get: 77 http://deb.debian.org/debian buster/main i386 libbpp-phyl-omics-dev i386 2.4.1-1 [124 kB] Get: 78 http://deb.debian.org/debian buster/main i386 libbz2-dev i386 1.0.6-9.2~deb10u1 [31.2 kB] Get: 79 http://deb.debian.org/debian buster/main i386 libtext-unidecode-perl all 1.30-1 [103 kB] Get: 80 http://deb.debian.org/debian buster/main i386 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get: 81 http://deb.debian.org/debian buster/main i386 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get: 82 http://deb.debian.org/debian buster/main i386 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get: 83 http://deb.debian.org/debian buster/main i386 libxml-libxml-perl i386 2.0134+dfsg-1 [362 kB] Get: 84 http://deb.debian.org/debian buster/main i386 texinfo i386 6.5.0.dfsg.1-4+b1 [1425 kB] Get: 85 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Fetched 59.4 MB in 15s (3844 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../04-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../07-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../08-tex-common_6.11_all.deb ... Unpacking tex-common (6.11) ... Selecting previously unselected package libncurses6:i386. Preparing to unpack .../09-libncurses6_6.1+20181013-2+deb10u2_i386.deb ... Unpacking libncurses6:i386 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libprocps7:i386. Preparing to unpack .../10-libprocps7_2%3a3.3.15-2_i386.deb ... Unpacking libprocps7:i386 (2:3.3.15-2) ... Selecting previously unselected package lsb-base. Preparing to unpack .../11-lsb-base_10.2019051400_all.deb ... Unpacking lsb-base (10.2019051400) ... Selecting previously unselected package procps. Preparing to unpack .../12-procps_2%3a3.3.15-2_i386.deb ... Unpacking procps (2:3.3.15-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../13-libmagic-mgc_1%3a5.35-4+deb10u1_i386.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../14-libmagic1_1%3a5.35-4+deb10u1_i386.deb ... Unpacking libmagic1:i386 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../15-file_1%3a5.35-4+deb10u1_i386.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../16-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../17-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../18-m4_1.4.18-2_i386.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../19-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../20-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../21-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../22-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package cmake-data. Preparing to unpack .../23-cmake-data_3.13.4-1_all.deb ... Unpacking cmake-data (3.13.4-1) ... Selecting previously unselected package libicu63:i386. Preparing to unpack .../24-libicu63_63.1-6_i386.deb ... Unpacking libicu63:i386 (63.1-6) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../25-libxml2_2.9.4+dfsg1-7+b3_i386.deb ... Unpacking libxml2:i386 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libarchive13:i386. Preparing to unpack .../26-libarchive13_3.3.3-4+deb10u1_i386.deb ... Unpacking libarchive13:i386 (3.3.3-4+deb10u1) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../27-libkeyutils1_1.6-6_i386.deb ... Unpacking libkeyutils1:i386 (1.6-6) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../28-libkrb5support0_1.17-3_i386.deb ... Unpacking libkrb5support0:i386 (1.17-3) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../29-libk5crypto3_1.17-3_i386.deb ... Unpacking libk5crypto3:i386 (1.17-3) ... Selecting previously unselected package libssl1.1:i386. Preparing to unpack .../30-libssl1.1_1.1.1d-0+deb10u2_i386.deb ... Unpacking libssl1.1:i386 (1.1.1d-0+deb10u2) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../31-libkrb5-3_1.17-3_i386.deb ... Unpacking libkrb5-3:i386 (1.17-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../32-libgssapi-krb5-2_1.17-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.17-3) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../33-libsasl2-modules-db_2.1.27+dfsg-1+deb10u1_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../34-libsasl2-2_2.1.27+dfsg-1+deb10u1_i386.deb ... Unpacking libsasl2-2:i386 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../35-libldap-common_2.4.47+dfsg-3+deb10u1_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3+deb10u1) ... Selecting previously unselected package libldap-2.4-2:i386. Preparing to unpack .../36-libldap-2.4-2_2.4.47+dfsg-3+deb10u1_i386.deb ... Unpacking libldap-2.4-2:i386 (2.4.47+dfsg-3+deb10u1) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../37-libnghttp2-14_1.36.0-2+deb10u1_i386.deb ... Unpacking libnghttp2-14:i386 (1.36.0-2+deb10u1) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../38-libpsl5_0.20.2-2_i386.deb ... Unpacking libpsl5:i386 (0.20.2-2) ... 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Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../51-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../52-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../53-dwz_0.12-3_i386.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../54-libglib2.0-0_2.58.3-2+deb10u2_i386.deb ... Unpacking libglib2.0-0:i386 (2.58.3-2+deb10u2) ... Selecting previously unselected package libcroco3:i386. Preparing to unpack .../55-libcroco3_0.6.12-3_i386.deb ... Unpacking libcroco3:i386 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../56-gettext_0.19.8.1-9_i386.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../57-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../58-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../59-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../60-icu-devtools_63.1-6_i386.deb ... Unpacking icu-devtools (63.1-6) ... Selecting previously unselected package libboost1.67-dev:i386. Preparing to unpack .../61-libboost1.67-dev_1.67.0-13+deb10u1_i386.deb ... Unpacking libboost1.67-dev:i386 (1.67.0-13+deb10u1) ... Selecting previously unselected package libboost-regex1.67.0:i386. Preparing to unpack .../62-libboost-regex1.67.0_1.67.0-13+deb10u1_i386.deb ... Unpacking libboost-regex1.67.0:i386 (1.67.0-13+deb10u1) ... Selecting previously unselected package libicu-dev:i386. Preparing to unpack .../63-libicu-dev_63.1-6_i386.deb ... Unpacking libicu-dev:i386 (63.1-6) ... Selecting previously unselected package libboost-regex1.67-dev:i386. Preparing to unpack .../64-libboost-regex1.67-dev_1.67.0-13+deb10u1_i386.deb ... Unpacking libboost-regex1.67-dev:i386 (1.67.0-13+deb10u1) ... Selecting previously unselected package libboost-iostreams1.67-dev:i386. Preparing to unpack .../65-libboost-iostreams1.67-dev_1.67.0-13+deb10u1_i386.deb ... Unpacking libboost-iostreams1.67-dev:i386 (1.67.0-13+deb10u1) ... Selecting previously unselected package libboost-iostreams-dev:i386. Preparing to unpack .../66-libboost-iostreams-dev_1.67.0.1_i386.deb ... Unpacking libboost-iostreams-dev:i386 (1.67.0.1) ... Selecting previously unselected package libbpp-core4:i386. Preparing to unpack .../67-libbpp-core4_2.4.1-3_i386.deb ... Unpacking libbpp-core4:i386 (2.4.1-3) ... Selecting previously unselected package libbpp-core-dev. Preparing to unpack .../68-libbpp-core-dev_2.4.1-3_i386.deb ... Unpacking libbpp-core-dev (2.4.1-3) ... Selecting previously unselected package libbpp-seq12:i386. Preparing to unpack .../69-libbpp-seq12_2.4.1-3_i386.deb ... Unpacking libbpp-seq12:i386 (2.4.1-3) ... Selecting previously unselected package libbpp-phyl12:i386. Preparing to unpack .../70-libbpp-phyl12_2.4.1-2_i386.deb ... Unpacking libbpp-phyl12:i386 (2.4.1-2) ... Selecting previously unselected package libbpp-seq-dev. Preparing to unpack .../71-libbpp-seq-dev_2.4.1-3_i386.deb ... Unpacking libbpp-seq-dev (2.4.1-3) ... Selecting previously unselected package libbpp-phyl-dev:i386. Preparing to unpack .../72-libbpp-phyl-dev_2.4.1-2_i386.deb ... Unpacking libbpp-phyl-dev:i386 (2.4.1-2) ... Selecting previously unselected package libbpp-seq-omics3:i386. Preparing to unpack .../73-libbpp-seq-omics3_2.4.1-3_i386.deb ... Unpacking libbpp-seq-omics3:i386 (2.4.1-3) ... Selecting previously unselected package libbpp-phyl-omics3:i386. Preparing to unpack .../74-libbpp-phyl-omics3_2.4.1-1_i386.deb ... Unpacking libbpp-phyl-omics3:i386 (2.4.1-1) ... Selecting previously unselected package libbpp-seq-omics-dev. Preparing to unpack .../75-libbpp-seq-omics-dev_2.4.1-3_i386.deb ... Unpacking libbpp-seq-omics-dev (2.4.1-3) ... Selecting previously unselected package libbpp-phyl-omics-dev. Preparing to unpack .../76-libbpp-phyl-omics-dev_2.4.1-1_i386.deb ... Unpacking libbpp-phyl-omics-dev (2.4.1-1) ... Selecting previously unselected package libbz2-dev:i386. Preparing to unpack .../77-libbz2-dev_1.0.6-9.2~deb10u1_i386.deb ... Unpacking libbz2-dev:i386 (1.0.6-9.2~deb10u1) ... Selecting previously unselected package libtext-unidecode-perl. Preparing to unpack .../78-libtext-unidecode-perl_1.30-1_all.deb ... Unpacking libtext-unidecode-perl (1.30-1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../79-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../80-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../81-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../82-libxml-libxml-perl_2.0134+dfsg-1_i386.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package texinfo. Preparing to unpack .../83-texinfo_6.5.0.dfsg.1-4+b1_i386.deb ... Unpacking texinfo (6.5.0.dfsg.1-4+b1) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../84-zlib1g-dev_1%3a1.2.11.dfsg-1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Setting up libboost1.67-dev:i386 (1.67.0-13+deb10u1) ... Setting up libexpat1:i386 (2.2.6-2+deb10u1) ... Setting up libpipeline1:i386 (1.5.1-2) ... Setting up lsb-base (10.2019051400) ... Setting up libkeyutils1:i386 (1.6-6) ... Setting up libpsl5:i386 (0.20.2-2) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:i386 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up libssl1.1:i386 (1.1.1d-0+deb10u2) ... Setting up libprocps7:i386 (2:3.3.15-2) ... Setting up libnghttp2-14:i386 (1.36.0-2+deb10u1) ... Setting up libmagic1:i386 (1:5.35-4+deb10u1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u1) ... Setting up libicu63:i386 (63.1-6) ... Setting up libkrb5support0:i386 (1.17-3) ... Setting up libsasl2-modules-db:i386 (2.1.27+dfsg-1+deb10u1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up autotools-dev (20180224.1) ... Setting up libuv1:i386 (1.24.1-1) ... Setting up libbpp-core4:i386 (2.4.1-3) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2) ... Setting up libncurses6:i386 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:i386 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up icu-devtools (63.1-6) ... Setting up libk5crypto3:i386 (1.17-3) ... Setting up libsasl2-2:i386 (2.1.27+dfsg-1+deb10u1) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Setting up sensible-utils (0.0.12) ... Setting up librhash0:i386 (1.3.8-1) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libssh2-1:i386 (1.8.0-2.1) ... Setting up cmake-data (3.13.4-1) ... Setting up libkrb5-3:i386 (1.17-3) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up libbpp-seq12:i386 (2.4.1-3) ... Setting up libbsd0:i386 (0.9.1-2) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up libicu-dev:i386 (63.1-6) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+b3) ... Setting up libjsoncpp1:i386 (1.7.4-3) ... Setting up libbz2-dev:i386 (1.0.6-9.2~deb10u1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libbpp-phyl12:i386 (2.4.1-2) ... Setting up libboost-regex1.67.0:i386 (1.67.0-13+deb10u1) ... Setting up libbpp-seq-omics3:i386 (2.4.1-3) ... Setting up libtool (2.4.6-9) ... Setting up libarchive13:i386 (3.3.3-4+deb10u1) ... Setting up libboost-regex1.67-dev:i386 (1.67.0-13+deb10u1) ... Setting up libldap-2.4-2:i386 (2.4.47+dfsg-3+deb10u1) ... Setting up m4 (1.4.18-2) ... Setting up libbpp-core-dev (2.4.1-3) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:i386 (1.17-3) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libbpp-phyl-omics3:i386 (2.4.1-1) ... Setting up libcurl4:i386 (7.64.0-4) ... Setting up libboost-iostreams1.67-dev:i386 (1.67.0-13+deb10u1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libbpp-seq-dev (2.4.1-3) ... Setting up gettext (0.19.8.1-9) ... Setting up libboost-iostreams-dev:i386 (1.67.0.1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libbpp-phyl-dev:i386 (2.4.1-2) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libbpp-seq-omics-dev (2.4.1-3) ... Setting up cmake (3.13.4-1) ... Setting up libbpp-phyl-omics-dev (2.4.1-1) ... Setting up po-debconf (1.0.21) ... Setting up texinfo (6.5.0.dfsg.1-4+b1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.1.1) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/maffilter-1.3.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package maffilter dpkg-buildpackage: info: source version 1.3.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Julien Dutheil dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/maffilter-1.3.1+dfsg' dh_auto_configure -- -DCMAKE_BUILD_TYPE=RelWithDebInfo cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DCMAKE_BUILD_TYPE=RelWithDebInfo .. -- The CXX compiler identification is GNU 8.3.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found /bin/gzip compression program, using file extension .gz -- bpp-core 4.1.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-core.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-seq.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-seq-omics 3.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-seq-omics.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-seq-omics.so.3.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-phyl.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- bpp-phyl-omics 3.0.0 found: -- static lib: /usr/lib/i386-linux-gnu/libbpp-phyl-omics.a -- shared lib: /usr/lib/i386-linux-gnu/libbpp-phyl-omics.so.3.0.0 -- includes: /usr/include -- Boost version: 1.67.0 -- Found the following Boost libraries: -- iostreams -- regex -- Boost libraries found here: includes: /usr/include dynamic libraries: /usr/lib/i386-linux-gnu/libboost_iostreams.so;/usr/lib/i386-linux-gnu/libboost_regex.so -- Library z found here: includes: /usr/include dynamic libraries: /usr/lib/i386-linux-gnu/libz.so -- Library bz2 found here: includes: /usr/include dynamic libraries: /usr/lib/i386-linux-gnu/libbz2.so -- Found /usr/bin/makeinfo: 'info' and 'html' target enabled (builds info/html doc) -- Found texi2dvi: 'pdf' target enabled (builds pdf doc) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg' dh_auto_build cd obj-i686-linux-gnu && make -j10 make[1]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/maffilter-1.3.1+dfsg -B/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/CMakeFiles /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/depend make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/MafFilter /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter/CMakeFiles/maffilter.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/man /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/man /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/man/CMakeFiles/man.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/doc /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc/CMakeFiles/info.dir/DependInfo.cmake --color= Scanning dependencies of target maffilter make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target info Scanning dependencies of target man make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/build make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' [ 12%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/MafFilter.cpp.o [ 25%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter && /usr/bin/c++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/MafFilter.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/MafFilter.cpp cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter && /usr/bin/c++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/OutputAsFeaturesMafIterator.cpp [ 37%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o [ 50%] Generating info page cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter && /usr/bin/c++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/TreeBuildingSystemCallMafIterator.cpp cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc && /usr/bin/makeinfo --no-split -o /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc/maffilter.info /build/maffilter-1.3.1+dfsg/doc/maffilter.texi [ 62%] Building CXX object MafFilter/CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter && /usr/bin/c++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -o CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o -c /build/maffilter-1.3.1+dfsg/MafFilter/SystemCallMafIterator.cpp [ 75%] Compressing manpage maffilter.1 cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/man && /bin/gzip -c -n -9 /build/maffilter-1.3.1+dfsg/man/maffilter.1 > /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/man/maffilter.1.gz make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' [ 75%] Built target man [ 87%] Compressing info page cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc && /bin/gzip -c -n -9 /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc/maffilter.info > /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc/maffilter.info.gz make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' [ 87%] Built target info [100%] Linking CXX executable maffilter cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter && /usr/bin/cmake -E cmake_link_script CMakeFiles/maffilter.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -Wall -Weffc++ -Wshadow -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/maffilter.dir/MafFilter.cpp.o CMakeFiles/maffilter.dir/OutputAsFeaturesMafIterator.cpp.o CMakeFiles/maffilter.dir/SystemCallMafIterator.cpp.o CMakeFiles/maffilter.dir/TreeBuildingSystemCallMafIterator.cpp.o -o maffilter /usr/lib/i386-linux-gnu/libbpp-phyl-omics.so.3.0.0 -lboost_iostreams -lboost_regex -lz -lbz2 /usr/lib/i386-linux-gnu/libbpp-seq-omics.so.3.0.0 /usr/lib/i386-linux-gnu/libbpp-phyl.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/i386-linux-gnu/libbpp-core.so.4.1.0 make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' [100%] Built target maffilter make[2]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install cd obj-i686-linux-gnu && make -j10 install DESTDIR=/build/maffilter-1.3.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/maffilter-1.3.1+dfsg -B/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/CMakeFiles /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/depend make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/man /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/man /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/man/CMakeFiles/man.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/doc /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/doc/CMakeFiles/info.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' cd /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/maffilter-1.3.1+dfsg /build/maffilter-1.3.1+dfsg/MafFilter /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/MafFilter/CMakeFiles/maffilter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Nothing to be done for 'man/CMakeFiles/man.dir/build'. make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Nothing to be done for 'doc/CMakeFiles/info.dir/build'. make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make -f MafFilter/CMakeFiles/maffilter.dir/build.make MafFilter/CMakeFiles/maffilter.dir/build make[3]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[3]: Nothing to be done for 'MafFilter/CMakeFiles/maffilter.dir/build'. make[3]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' [ 12%] Built target man [ 37%] Built target info [100%] Built target maffilter make[2]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/maffilter-1.3.1+dfsg/debian/tmp/usr/bin/maffilter -- Installing: /build/maffilter-1.3.1+dfsg/debian/tmp/usr/share/info/maffilter.info.gz -- Installing: /build/maffilter-1.3.1+dfsg/debian/tmp/usr/share/man/man1/maffilter.1.gz make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg/obj-i686-linux-gnu' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/maffilter-1.3.1+dfsg' dh_fixperms find debian/*/usr/share -name "*.bpp" -executable -exec chmod -x \{\} \; make[1]: Leaving directory '/build/maffilter-1.3.1+dfsg' dh_missing dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/maffilter/usr/bin/maffilter was not linked against libboost_regex.so.1.67.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/maffilter/usr/bin/maffilter was not linked against libbz2.so.1.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/maffilter/usr/bin/maffilter was not linked against libz.so.1 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'maffilter-dbgsym' in '../maffilter-dbgsym_1.3.1+dfsg-1_i386.deb'. dpkg-deb: building package 'maffilter-examples' in '../maffilter-examples_1.3.1+dfsg-1_all.deb'. dpkg-deb: building package 'maffilter' in '../maffilter_1.3.1+dfsg-1_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../maffilter_1.3.1+dfsg-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3576 and its subdirectories I: Current time: Thu May 7 12:59:23 -12 2020 I: pbuilder-time-stamp: 1588899563