I: pbuilder: network access will be disabled during build I: Current time: Sun Sep 5 15:23:52 -12 2021 I: pbuilder-time-stamp: 1630898632 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-sqt_0.8.0-3.dsc] I: copying [./python-sqt_0.8.0.orig.tar.gz] I: copying [./python-sqt_0.8.0-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sun Feb 3 20:21:22 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-sqt_0.8.0-3.dsc dpkg-source: info: extracting python-sqt in python-sqt-0.8.0 dpkg-source: info: unpacking python-sqt_0.8.0.orig.tar.gz dpkg-source: info: unpacking python-sqt_0.8.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixme_ignore_failing_test.patch dpkg-source: info: applying fixme_ignore_failing_test2.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15154/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15154' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.RZcBgnG5d7/pbuilderrc_8IWw --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.RZcBgnG5d7/b1 --logfile b1/build.log python-sqt_0.8.0-3.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled11-arm64 4.4.0-186-generic #216-Ubuntu SMP Wed Jul 1 05:35:21 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Sep 5 02:48 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/15154/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), dh-python, python3-all, python3-dev, python3-setuptools, cython3, python3-nose, python3-cutadapt, python3-pysam, python3-seaborn, python3-xopen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-nose; however: Package python3-nose is not installed. pbuilder-satisfydepends-dummy depends on python3-cutadapt; however: Package python3-cutadapt is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam; however: Package python3-pysam is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on python3-xopen; however: Package python3-xopen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdmainutils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbsd0{a} libcroco3{a} libcurl3-gnutls{a} libdeflate0{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libglib2.0-0{a} libgssapi-krb5-2{a} libhts2{a} libicu63{a} libjs-jquery{a} libjs-jquery-ui{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.4-2{a} libldap-common{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libpng16-16{a} libpsl5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.7{a} libpython3.7-dev{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libssl1.1{a} libtcl8.6{a} libtk8.6{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxss1{a} lsb-base{a} m4{a} man-db{a} mime-support{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-cutadapt{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-kiwisolver{a} python3-lib2to3{a} python3-matplotlib{a} python3-minimal{a} python3-nose{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-pyparsing{a} python3-pysam{a} python3-scipy{a} python3-seaborn{a} python3-setuptools{a} python3-six{a} python3-tk{a} python3-tz{a} python3-xopen{a} python3.7{a} python3.7-dev{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} ttf-bitstream-vera{a} ucf{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bs4 python3-html5lib python3-lxml python3-numexpr python3-patsy python3-pil python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 121 newly installed, 0 to remove and 0 not upgraded. Need to get 68.6 MB of archives. After unpacking 274 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 libpython3.7-minimal arm64 3.7.3-2+deb10u2 [588 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 python3.7-minimal arm64 3.7.3-2+deb10u2 [1404 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 python3-minimal arm64 3.7.3-1 [36.6 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 libmpdec2 arm64 2.4.2-2 [77.7 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libpython3.7-stdlib arm64 3.7.3-2+deb10u2 [1641 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 python3.7 arm64 3.7.3-2+deb10u2 [330 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 libpython3-stdlib arm64 3.7.3-1 [20.0 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 python3 arm64 3.7.3-1 [61.5 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 ucf all 3.0038+nmu1 [69.0 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 libtcl8.6 arm64 8.6.9+dfsg-2 [950 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 libpng16-16 arm64 1.6.36-6 [287 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 libfreetype6 arm64 2.9.1-3+deb10u1 [355 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 ttf-bitstream-vera all 1.10-8 [352 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 fontconfig-config all 2.13.1-2 [280 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 libfontconfig1 arm64 2.13.1-2 [343 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 libxau6 arm64 1:1.0.8-1+b2 [19.3 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 libxcb1 arm64 1.13.1-2 [135 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 libx11-data all 2:1.6.7-1 [298 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 libx11-6 arm64 2:1.6.7-1 [735 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 libxext6 arm64 2:1.3.3-1+b2 [48.6 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 libxrender1 arm64 1:0.9.10-1 [30.4 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 libxft2 arm64 2.3.2-2 [51.3 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 lsb-base all 10.2019051400 [28.4 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 x11-common all 1:7.7+19 [251 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 libxss1 arm64 1:1.2.3-1 [17.8 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 libtk8.6 arm64 8.6.9-2 [728 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-4 [493 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 blt arm64 2.5.3+dfsg-4 [14.8 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 cython3 arm64 0.29.2-2 [1259 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 60 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 65 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 69 http://deb.debian.org/debian buster/main arm64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 70 http://deb.debian.org/debian buster/main arm64 python3-distutils all 3.7.3-1 [142 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 dh-python all 3.20190308 [99.3 kB] Get: 72 http://deb.debian.org/debian buster/main arm64 fonts-lyx all 2.3.2-1 [199 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 libgfortran5 arm64 8.3.0-6 [298 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libblas3 arm64 3.8.0-2 [100 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get: 76 http://deb.debian.org/debian buster/main arm64 libkrb5support0 arm64 1.17-3 [64.7 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 libk5crypto3 arm64 1.17-3 [122 kB] Get: 78 http://deb.debian.org/debian buster/main arm64 libkrb5-3 arm64 1.17-3 [353 kB] Get: 79 http://deb.debian.org/debian buster/main arm64 libgssapi-krb5-2 arm64 1.17-3 [150 kB] Get: 80 http://deb.debian.org/debian buster/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1+deb10u1 [69.3 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1+deb10u1 [105 kB] Get: 82 http://deb.debian.org/debian buster/main arm64 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 83 http://deb.debian.org/debian buster/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3+deb10u2 [216 kB] Get: 84 http://deb.debian.org/debian buster/main arm64 libnghttp2-14 arm64 1.36.0-2+deb10u1 [81.9 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get: 86 http://deb.debian.org/debian buster/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [55.7 kB] Get: 87 http://deb.debian.org/debian buster/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get: 88 http://deb.debian.org/debian buster/main arm64 libcurl3-gnutls arm64 7.64.0-4+deb10u1 [310 kB] Get: 89 http://deb.debian.org/debian buster/main arm64 libdeflate0 arm64 1.2-1 [51.4 kB] Get: 90 http://deb.debian.org/debian buster/main arm64 libexpat1-dev arm64 2.2.6-2+deb10u1 [128 kB] Get: 91 http://deb.debian.org/debian buster/main arm64 libhts2 arm64 1.9-11 [277 kB] Get: 92 http://deb.debian.org/debian buster/main arm64 libjs-jquery all 3.3.1~dfsg-3 [332 kB] Get: 93 http://deb.debian.org/debian buster/main arm64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get: 94 http://deb.debian.org/debian buster/main arm64 liblapack3 arm64 3.8.0-2 [1489 kB] Get: 95 http://deb.debian.org/debian buster/main arm64 libpython3.7 arm64 3.7.3-2+deb10u2 [1371 kB] Get: 96 http://deb.debian.org/debian buster/main arm64 libpython3.7-dev arm64 3.7.3-2+deb10u2 [2380 kB] Get: 97 http://deb.debian.org/debian buster/main arm64 libpython3-dev arm64 3.7.3-1 [20.1 kB] Get: 98 http://deb.debian.org/debian buster/main arm64 python-matplotlib-data all 3.0.2-2 [4138 kB] Get: 99 http://deb.debian.org/debian buster/main arm64 python3-all arm64 3.7.3-1 [1068 B] Get: 100 http://deb.debian.org/debian buster/main arm64 python3-pkg-resources all 40.8.0-1 [153 kB] Get: 101 http://deb.debian.org/debian buster/main arm64 python3-xopen all 0.5.0-2 [8320 B] Get: 102 http://deb.debian.org/debian buster/main arm64 python3-cutadapt arm64 1.18-1 [159 kB] Get: 103 http://deb.debian.org/debian buster/main arm64 python3-six all 1.12.0-1 [15.7 kB] Get: 104 http://deb.debian.org/debian buster/main arm64 python3-cycler all 0.10.0-1 [7556 B] Get: 105 http://deb.debian.org/debian buster/main arm64 python3-dateutil all 2.7.3-3 [64.5 kB] Get: 106 http://deb.debian.org/debian buster/main arm64 python3-decorator all 4.3.0-1.1 [14.5 kB] Get: 107 http://deb.debian.org/debian buster/main arm64 python3.7-dev arm64 3.7.3-2+deb10u2 [509 kB] Get: 108 http://deb.debian.org/debian buster/main arm64 python3-dev arm64 3.7.3-1 [1264 B] Get: 109 http://deb.debian.org/debian buster/main arm64 python3-kiwisolver arm64 1.0.1-2+b1 [62.9 kB] Get: 110 http://deb.debian.org/debian buster/main arm64 python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB] Get: 111 http://deb.debian.org/debian buster/main arm64 python3-numpy arm64 1:1.16.2-1 [1991 kB] Get: 112 http://deb.debian.org/debian buster/main arm64 python3-matplotlib arm64 3.0.2-2 [5310 kB] Get: 113 http://deb.debian.org/debian buster/main arm64 python3-nose all 1.3.7-4 [132 kB] Get: 114 http://deb.debian.org/debian buster/main arm64 python3-tz all 2019.1-1 [27.1 kB] Get: 115 http://deb.debian.org/debian buster/main arm64 python3-pandas-lib arm64 0.23.3+dfsg-3 [2677 kB] Get: 116 http://deb.debian.org/debian buster/main arm64 python3-pandas all 0.23.3+dfsg-3 [1750 kB] Get: 117 http://deb.debian.org/debian buster/main arm64 python3-pysam arm64 0.15.2+ds-2 [1423 kB] Get: 118 http://deb.debian.org/debian buster/main arm64 python3-scipy arm64 1.1.0-7 [9306 kB] Get: 119 http://deb.debian.org/debian buster/main arm64 python3-tk arm64 3.7.3-1 [97.4 kB] Get: 120 http://deb.debian.org/debian buster/main arm64 python3-seaborn all 0.9.0-1 [158 kB] Get: 121 http://deb.debian.org/debian buster/main arm64 python3-setuptools all 40.8.0-1 [306 kB] Fetched 68.6 MB in 9s (7790 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../1-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../2-libuchardet0_0.0.6-3_arm64.deb ... 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Unpacking libexpat1:arm64 (2.2.6-2+deb10u1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../9-python3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7-minimal (3.7.3-2+deb10u2) ... Setting up libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Setting up libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Setting up libexpat1:arm64 (2.2.6-2+deb10u1) ... Setting up python3.7-minimal (3.7.3-2+deb10u2) ... Selecting previously unselected package python3-minimal. (Reading database ... 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Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:arm64. Preparing to unpack .../4-libreadline7_7.0-5_arm64.deb ... Unpacking libreadline7:arm64 (7.0-5) ... Selecting previously unselected package libpython3.7-stdlib:arm64. Preparing to unpack .../5-libpython3.7-stdlib_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7. Preparing to unpack .../6-python3.7_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7 (3.7.3-2+deb10u2) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../7-libpython3-stdlib_3.7.3-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.7.3-1) ... Setting up python3-minimal (3.7.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20524 files and directories currently installed.) Preparing to unpack .../000-python3_3.7.3-1_arm64.deb ... Unpacking python3 (3.7.3-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../003-libmagic1_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.19.8.1-9_arm64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package ucf. Preparing to unpack .../006-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../007-libsigsegv2_2.12-2_arm64.deb ... Unpacking libsigsegv2:arm64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../008-m4_1.4.18-2_arm64.deb ... Unpacking m4 (1.4.18-2) ... 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Selecting previously unselected package lsb-base. Preparing to unpack .../027-lsb-base_10.2019051400_all.deb ... Unpacking lsb-base (10.2019051400) ... Selecting previously unselected package x11-common. Preparing to unpack .../028-x11-common_1%3a7.7+19_all.deb ... Unpacking x11-common (1:7.7+19) ... Selecting previously unselected package libxss1:arm64. Preparing to unpack .../029-libxss1_1%3a1.2.3-1_arm64.deb ... Unpacking libxss1:arm64 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:arm64. Preparing to unpack .../030-libtk8.6_8.6.9-2_arm64.deb ... Unpacking libtk8.6:arm64 (8.6.9-2) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../031-tk8.6-blt2.5_2.5.3+dfsg-4_arm64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4) ... Selecting previously unselected package blt. Preparing to unpack .../032-blt_2.5.3+dfsg-4_arm64.deb ... Unpacking blt (2.5.3+dfsg-4) ... Selecting previously unselected package cython3. Preparing to unpack .../033-cython3_0.29.2-2_arm64.deb ... Unpacking cython3 (0.29.2-2) ... Selecting previously unselected package libtool. Preparing to unpack .../034-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../035-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../036-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../037-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../038-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../039-libelf1_0.176-1.1_arm64.deb ... Unpacking libelf1:arm64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../040-dwz_0.12-3_arm64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../041-libglib2.0-0_2.58.3-2+deb10u2_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... Selecting previously unselected package libicu63:arm64. Preparing to unpack .../042-libicu63_63.1-6+deb10u1_arm64.deb ... Unpacking libicu63:arm64 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../043-libxml2_2.9.4+dfsg1-7+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libcroco3:arm64. Preparing to unpack .../044-libcroco3_0.6.12-3_arm64.deb ... Unpacking libcroco3:arm64 (0.6.12-3) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../045-libncurses6_6.1+20181013-2+deb10u2_arm64.deb ... Unpacking libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package gettext. Preparing to unpack .../046-gettext_0.19.8.1-9_arm64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../047-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../048-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../049-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../050-python3-lib2to3_3.7.3-1_all.deb ... Unpacking python3-lib2to3 (3.7.3-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../051-python3-distutils_3.7.3-1_all.deb ... Unpacking python3-distutils (3.7.3-1) ... Selecting previously unselected package dh-python. Preparing to unpack .../052-dh-python_3.20190308_all.deb ... Unpacking dh-python (3.20190308) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../053-fonts-lyx_2.3.2-1_all.deb ... Unpacking fonts-lyx (2.3.2-1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../054-libgfortran5_8.3.0-6_arm64.deb ... Unpacking libgfortran5:arm64 (8.3.0-6) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../055-libblas3_3.8.0-2_arm64.deb ... Unpacking libblas3:arm64 (3.8.0-2) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../056-libkeyutils1_1.6-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6-6) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../057-libkrb5support0_1.17-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.17-3) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../058-libk5crypto3_1.17-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.17-3) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../059-libkrb5-3_1.17-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.17-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../060-libgssapi-krb5-2_1.17-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.17-3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../061-libsasl2-modules-db_2.1.27+dfsg-1+deb10u1_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../062-libsasl2-2_2.1.27+dfsg-1+deb10u1_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../063-libldap-common_2.4.47+dfsg-3+deb10u2_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3+deb10u2) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../064-libldap-2.4-2_2.4.47+dfsg-3+deb10u2_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.47+dfsg-3+deb10u2) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../065-libnghttp2-14_1.36.0-2+deb10u1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.36.0-2+deb10u1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../066-libpsl5_0.20.2-2_arm64.deb ... Unpacking libpsl5:arm64 (0.20.2-2) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../067-librtmp1_2.4+20151223.gitfa8646d.1-2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... 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Setting up lsb-base (10.2019051400) ... Setting up libxau6:arm64 (1:1.0.8-1+b2) ... Setting up libkeyutils1:arm64 (1.6-6) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up mime-support (3.62) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.2-1) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libnghttp2-14:arm64 (1.36.0-2+deb10u1) ... Setting up libmagic1:arm64 (1:5.35-4+deb10u1) ... Setting up libdeflate0:arm64 (1.2-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u2) ... Setting up libicu63:arm64 (63.1-6+deb10u1) ... Setting up libkrb5support0:arm64 (1.17-3) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1+deb10u1) ... Setting up autotools-dev (20180224.1) ... Setting up libexpat1-dev:arm64 (2.2.6-2+deb10u1) ... Setting up libx11-data (2:1.6.7-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up libpng16-16:arm64 (1.6.36-6) ... Setting up libtcl8.6:arm64 (8.6.9+dfsg-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libk5crypto3:arm64 (1.17-3) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1+deb10u1) ... Setting up libgfortran5:arm64 (8.3.0-6) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up libkrb5-3:arm64 (1.17-3) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up python-matplotlib-data (3.0.2-2) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up libreadline7:arm64 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Setting up libxcb1:arm64 (1.13.1-2) ... Setting up libpython3.7:arm64 (3.7.3-2+deb10u2) ... Setting up libtool (2.4.6-9) ... Setting up libpython3.7-dev:arm64 (3.7.3-2+deb10u2) ... Setting up libldap-2.4-2:arm64 (2.4.47+dfsg-3+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up libblas3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libfreetype6:arm64 (2.9.1-3+deb10u1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-3) ... Setting up libcroco3:arm64 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:arm64 (2:1.6.7-1) ... Setting up libpython3-stdlib:arm64 (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up liblapack3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up libpython3-dev:arm64 (3.7.3-1) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libxext6:arm64 (2:1.3.3-1+b2) ... Setting up libcurl3-gnutls:arm64 (7.64.0-4+deb10u1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python3.7-dev (3.7.3-2+deb10u2) ... Setting up python3-tz (2019.1-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-six (1.12.0-1) ... Setting up python3-decorator (4.3.0-1.1) ... Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-cycler (0.10.0-1) ... Setting up cython3 (0.29.2-2) ... Setting up python3-dateutil (2.7.3-3) ... Setting up libxss1:arm64 (1:1.2.3-1) ... Setting up libfontconfig1:arm64 (2.13.1-2) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python3-pkg-resources (40.8.0-1) ... Setting up python3-distutils (3.7.3-1) ... Setting up dh-python (3.20190308) ... Setting up libxft2:arm64 (2.3.2-2) ... Setting up python3-setuptools (40.8.0-1) ... Setting up libhts2:arm64 (1.9-11) ... Setting up po-debconf (1.0.21) ... Setting up libtk8.6:arm64 (8.6.9-2) ... Setting up python3-all (3.7.3-1) ... Setting up python3-nose (1.3.7-4) ... Setting up python3-xopen (0.5.0-2) ... Setting up python3-cutadapt (1.18-1) ... Setting up python3-dev (3.7.3-1) ... Setting up python3-kiwisolver (1.0.1-2+b1) ... Setting up python3-numpy (1:1.16.2-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4) ... Setting up python3-matplotlib (3.0.2-2) ... Setting up python3-pysam (0.15.2+ds-2) ... Setting up python3-scipy (1.1.0-7) ... Setting up blt (2.5.3+dfsg-4) ... Setting up python3-pandas-lib (0.23.3+dfsg-3) ... Setting up python3-tk:arm64 (3.7.3-1) ... Setting up python3-pandas (0.23.3+dfsg-3) ... Setting up python3-seaborn (0.9.0-1) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/python-sqt-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package python-sqt dpkg-buildpackage: info: source version 0.8.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py clean running clean removing '/build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-sqt.substvars debian/files rm -fr -- debian/python3-sqt/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build --test-nose -i python{version} -p 3.7 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/utils.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/region.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/reads.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/qualtrim.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/math.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/intervaltree.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/dna.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/compat.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/colorspace.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/cigar.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/args.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/ansicolor.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/align.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/_version.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/_codons.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/__main__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt copying sqt/__init__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt creating /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/sff.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/gtf.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/fasta.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/bam.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io copying sqt/io/__init__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io creating /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/translate.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/simreads.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/samsetop.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/samfixn.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/readlenhisto.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/readcov.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/randomseq.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/qualityguess.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/qgramfreq.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/mutate.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/histogram.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fixbam64.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastxmod.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastastats.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastagrep.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/fastaextract.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/cutvect.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/coverage.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/compare_sequences.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/checkvcfref.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/checkfastqpe.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/chars.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/bamstats.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/bameof.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/bam2fastq.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/align.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/addadapt.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands copying sqt/commands/__init__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands UPDATING /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py set /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py to '0.8.0' running build_ext Compiling sqt/_helpers.pyx because it changed. [1/1] Cythonizing sqt/_helpers.pyx building 'sqt._helpers' extension creating build creating build/temp.linux-arm64-3.7 creating build/temp.linux-arm64-3.7/sqt aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -ffile-prefix-map=/build/python-sqt-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c sqt/_helpers.c -o build/temp.linux-arm64-3.7/sqt/_helpers.o sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’: sqt/_helpers.c:6524:40: warning: array subscript has type ‘char’ [-Wchar-subscripts] __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]); ^ sqt/_helpers.c:6533:40: warning: array subscript has type ‘char’ [-Wchar-subscripts] __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]); ^ sqt/_helpers.c:6542:40: warning: array subscript has type ‘char’ [-Wchar-subscripts] __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]); ^ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/python-sqt-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.7/sqt/_helpers.o -o /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-sqt-0.8.0/sqt/_helpers.pyx tree = Parsing.p_module(s, pxd, full_module_name) debian/rules override_dh_auto_test make[1]: Entering directory '/build/python-sqt-0.8.0' LC_ALL=C.UTF-8 dh_auto_test pybuild --test --test-nose -i python{version} -p 3.7 I: pybuild base:217: cd /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build; python3.7 -m nose -v tests tests.testalign.test_edit_distance ... ok tests.testalign.test_edit_distance_bytes ... ok tests.testalign.test_edit_distance_banded ... ok tests.testalign.test_global_alignment ... ok tests.testalign.test_consensus ... ok tests.testalign.test_hamming_distance ... ok tests.testalign.test_hamming_distance_incorrect_length ... ok tests.testcigar.test_parse ... ok tests.testcigar.test_cigar_class ... ok tests.testcigar.test_parse_error_1 ... ok tests.testcigar.test_parse_error_2 ... ok tests.testcigar.test_parse_error_3 ... ok tests.testcigar.test_elements ... ok tests.testcigar.test_length ... ok tests.testcigar.test_concat ... ok tests.testcigar.test_split_at_element ... ok tests.testcigar.test_reference_to_query_position ... ok tests.testcigar.test_clipping ... ok tests.testcolorspace.test_encode ... ok tests.testcolorspace.test_decode ... ok tests.testdna.test_complement_string ... ok tests.testdna.test_complement_bytes ... ok tests.testdna.test_n_intervals ... ok tests.testdna.test_intervals_complement ... ok tests.testdna.test_amino_acid_regex ... ok tests.testdna.test_nt_to_aa ... ok tests.testfasta.test_fastqwriter ... ok tests.testfasta.test_fastqwriter_twoheaders ... ok tests.testfasta.test_fastawriter ... ok tests.testfasta.test_fastawriter_linelength ... ok tests.testfasta.test_fastawriter_sequence ... ok tests.testfasta.test_fastawriter_contextmanager ... ok tests.testfasta.test_fastareader ... ok tests.testfasta.test_fastareader_upper ... ok tests.testfasta.test_fastareader_lower ... ok tests.testfasta.test_fastareader_binary ... ok tests.testfasta.test_sequence_reader ... ok tests.testfasta.test_fastareader_contextmanager ... ok tests.testfasta.test_fastq_header ... ok tests.testindexedfasta.test_indexedfasta_contextmanager ... ok tests.testindexedfasta.test_indexedfasta ... ok tests.testindexedfasta.test_all_regions ... ok tests.testintervaltree.test_intervaltree ... ok tests.testmedian.test_median ... ok tests.testregion.test_region ... ok ---------------------------------------------------------------------- Ran 45 tests in 33.509s OK make[1]: Leaving directory '/build/python-sqt-0.8.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-sqt.substvars rm -fr -- debian/.debhelper/generated/python3-sqt/ debian/python3-sqt/ debian/tmp/ dh_auto_install -O--buildsystem=pybuild install -d /build/python-sqt-0.8.0/debian/python3-sqt pybuild --install --test-nose -i python{version} -p 3.7 --dest-dir /build/python-sqt-0.8.0/debian/python3-sqt I: pybuild base:217: /usr/bin/python3 setup.py install --root /build/python-sqt-0.8.0/debian/python3-sqt running install running build running build_py UPDATING /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py set /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py to '0.8.0' running build_ext running install_lib creating /build/python-sqt-0.8.0/debian/python3-sqt/usr creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7 creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_version.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/region.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/math.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/intervaltree.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/dna.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/colorspace.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/utils.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/align.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/cigar.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/_codons.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/compat.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/args.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/_version.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__pycache__/__init__.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/__init__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/addadapt.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/align.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bam2fastq.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bameof.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/bamstats.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/chars.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/checkfastqpe.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/checkvcfref.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/compare_sequences.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/coverage.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/cutvect.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastaextract.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastagrep.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastastats.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fastxmod.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/fixbam64.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/histogram.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/mutate.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/qgramfreq.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/qualityguess.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/randomseq.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/readcov.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/readlenhisto.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/samfixn.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/samsetop.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/simreads.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/commands/translate.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/gtf.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/fasta.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/__pycache__/__init__.cpython-37.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/__init__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/bam.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/fasta.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/gtf.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/io/sff.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__init__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/__main__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/_codons.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/align.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/ansicolor.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/args.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/cigar.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/colorspace.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/compat.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/dna.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/intervaltree.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/math.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/qualtrim.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/reads.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/region.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.7_sqt/build/sqt/utils.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/_version.py to _version.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/align.py to align.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bameof.py to bameof.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/chars.py to chars.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/coverage.py to coverage.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/histogram.py to histogram.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/mutate.py to mutate.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/readcov.py to readcov.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/simreads.py to simreads.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/commands/translate.py to translate.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/bam.py to bam.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/fasta.py to fasta.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/gtf.py to gtf.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/io/sff.py to sff.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/__main__.py to __main__.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/_codons.py to _codons.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/align.py to align.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/ansicolor.py to ansicolor.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/args.py to args.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/cigar.py to cigar.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/colorspace.py to colorspace.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/compat.py to compat.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/dna.py to dna.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/intervaltree.py to intervaltree.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/math.py to math.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/qualtrim.py to qualtrim.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/reads.py to reads.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/region.py to region.cpython-37.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt/utils.py to utils.cpython-37.pyc running install_egg_info running egg_info creating sqt.egg-info writing sqt.egg-info/PKG-INFO writing dependency_links to sqt.egg-info/dependency_links.txt writing entry points to sqt.egg-info/entry_points.txt writing requirements to sqt.egg-info/requires.txt writing top-level names to sqt.egg-info/top_level.txt writing manifest file 'sqt.egg-info/SOURCES.txt' reading manifest file 'sqt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'sqt.egg-info/SOURCES.txt' Copying sqt.egg-info to /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.7/dist-packages/sqt-0.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing sqt script to /build/python-sqt-0.8.0/debian/python3-sqt/usr/bin dh_installdocs -O--buildsystem=pybuild install -d debian/python3-sqt/usr/share/doc/python3-sqt install -d debian/.debhelper/generated/python3-sqt install -p -m0644 debian/README.Debian debian/python3-sqt/usr/share/doc/python3-sqt/README.Debian install -p -m0644 debian/copyright debian/python3-sqt/usr/share/doc/python3-sqt/copyright dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-sqt/usr/share/doc/python3-sqt/changelog.Debian dh_installman -O--buildsystem=pybuild install -d debian/python3-sqt/usr/share/man/man1/ install -p -m0644 ./debian/sqt.1 debian/python3-sqt/usr/share/man/man1/sqt.1 man -l --recode UTF-8 ./debian/python3-sqt/usr/share/man/man1/sqt.1 > debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new mv debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new debian/python3-sqt/usr/share/man/man1/sqt.1 chmod 0644 -- debian/python3-sqt/usr/share/man/man1/sqt.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 3.20190308 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7) D: dh_python3 debhelper:153: source=python-sqt, binary packages=['python3-sqt'] D: dh_python3 dh_python3:183: processing package python3-sqt... D: dh_python3 fs:49: moving files from debian/python3-sqt/usr/lib/python3.7/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/ D: dh_python3 tools:232: invoking: /usr/bin/python3.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' D: dh_python3 fs:260: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-sqt D: dh_python3 pydist:138: trying to find dependency for cutadapt (python=None) D: dh_python3 pydist:138: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:138: trying to find dependency for pysam!=0.9.0 (python=None) D: dh_python3 pydist:138: trying to find dependency for seaborn (python=None) D: dh_python3 pydist:138: trying to find dependency for xopen (python=None) D: dh_python3 depends:272: D={'python3-xopen', 'python3-cutadapt', 'python3 (>= 3.7~)', 'python3-seaborn', 'python3-matplotlib', 'python3-pysam', 'python3 (<< 3.8)', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/python3-sqt chmod a-x usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1 gzip -9nf usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1 cd '/build/python-sqt-0.8.0' dh_fixperms -O--buildsystem=pybuild find debian/python3-sqt -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-sqt ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-sqt/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-sqt/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-sqt/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-sqt/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_dwz -O--buildsystem=pybuild dwz -q -- debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so dh_strip -O--buildsystem=pybuild install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c3/cff1aec1096ca26db96f92c3ad819a07c2e225.debug chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c3/cff1aec1096ca26db96f92c3ad819a07c2e225.debug chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c3/cff1aec1096ca26db96f92c3ad819a07c2e225.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/c3/cff1aec1096ca26db96f92c3ad819a07c2e225.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc ln -s python3-sqt debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc/python3-sqt-dbgsym dh_makeshlibs -O--buildsystem=pybuild rm -f debian/python3-sqt/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=pybuild install -d debian/python3-sqt/DEBIAN dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-37m-aarch64-linux-gnu.so was not linked against libpthread.so.0 (it uses none of the library's symbols) dh_installdeb -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/postinst cat debian/python3-sqt.postinst.debhelper >> debian/python3-sqt/DEBIAN/postinst chmod 0755 -- debian/python3-sqt/DEBIAN/postinst chown 0:0 -- debian/python3-sqt/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/prerm cat debian/python3-sqt.prerm.debhelper >> debian/python3-sqt/DEBIAN/prerm chmod 0755 -- debian/python3-sqt/DEBIAN/prerm chown 0:0 -- debian/python3-sqt/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-sqt.substvars echo misc:Pre-Depends= >> debian/python3-sqt.substvars install -d debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/.debhelper/python3-sqt/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-sqt-dbgsym "-DDepends=python3-sqt (= \${binary:Version})" "-DDescription=debug symbols for python3-sqt" -DBuild-Ids=c3cff1aec1096ca26db96f92c3ad819a07c2e225 -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/python3-sqt -UMulti-Arch dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/python3-sqt/DEBIAN/control chown 0:0 -- debian/python3-sqt/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/python3-sqt >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-sqt/DEBIAN/md5sums chown 0:0 -- debian/python3-sqt/DEBIAN/md5sums cd debian/.debhelper/python3-sqt/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/python3-sqt .. dpkg-deb --build debian/.debhelper/python3-sqt/dbgsym-root .. dpkg-deb: building package 'python3-sqt-dbgsym' in '../python3-sqt-dbgsym_0.8.0-3_arm64.deb'. dpkg-deb: building package 'python3-sqt' in '../python3-sqt_0.8.0-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-sqt_0.8.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15154 and its subdirectories I: Current time: Sun Sep 5 15:27:10 -12 2021 I: pbuilder-time-stamp: 1630898830