I: pbuilder: network access will be disabled during build I: Current time: Sat Aug 7 08:20:42 -12 2021 I: pbuilder-time-stamp: 1628367643 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc] I: copying [./mrtrix3_3.0~rc3+git135-g2b8e7d0c2.orig.tar.gz] I: copying [./mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jan 22 14:48:32 2019 -12 gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc dpkg-source: info: extracting mrtrix3 in mrtrix3-3.0~rc3+git135-g2b8e7d0c2 dpkg-source: info: unpacking mrtrix3_3.0~rc3+git135-g2b8e7d0c2.orig.tar.gz dpkg-source: info: unpacking mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_blend_python dpkg-source: info: applying changeset_7fb509cf35d5862f073faaa7e136e987486960d9.diff dpkg-source: info: applying changeset_1c1d3304791bd029bca744ff6634bfa4824f6938.diff dpkg-source: info: applying deb_run_tests dpkg-source: info: applying debian_build_cfg I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/4333/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='4333' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.CMLYscMkAF/pbuilderrc_fjTF --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.CMLYscMkAF/b1 --logfile b1/build.log mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled15-arm64 4.4.0-184-generic #214-Ubuntu SMP Wed Jun 3 11:41:03 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 6 02:49 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/4333/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9~), liboctave-dev, libgsl-dev | libgsl0-dev, libeigen3-dev, libqt4-opengl-dev, python, pkg-config, libgtkmm-2.4-dev, libgtkglext1-dev, imagemagick, matlab-support-dev, bc dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on liboctave-dev; however: Package liboctave-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev | libgsl0-dev; however: Package libgsl-dev is not installed. Package libgsl0-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt4-opengl-dev; however: Package libqt4-opengl-dev is not installed. pbuilder-satisfydepends-dummy depends on python; however: Package python is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libgtkmm-2.4-dev; however: Package libgtkmm-2.4-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtkglext1-dev; however: Package libgtkglext1-dev is not installed. pbuilder-satisfydepends-dummy depends on imagemagick; however: Package imagemagick is not installed. pbuilder-satisfydepends-dummy depends on matlab-support-dev; however: Package matlab-support-dev is not installed. pbuilder-satisfydepends-dummy depends on bc; however: Package bc is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} gir1.2-atk-1.0{a} gir1.2-freedesktop{a} gir1.2-gdkpixbuf-2.0{a} gir1.2-glib-2.0{a} gir1.2-gtk-2.0{a} gir1.2-harfbuzz-0.0{a} gir1.2-pango-1.0{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} imagemagick{a} imagemagick-6-common{a} imagemagick-6.q16{a} intltool-debian{a} libaec-dev{a} libaec0{a} libamd2{a} libarchive-zip-perl{a} libarpack2{a} libasound2{a} libasound2-data{a} libatk1.0-0{a} libatk1.0-data{a} libatk1.0-dev{a} libatkmm-1.6-1v5{a} libatkmm-1.6-dev{a} libaudio2{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas-dev{a} libblas3{a} libblkid-dev{a} libbsd0{a} libbtf1{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libcairomm-1.0-1v5{a} libcairomm-1.0-dev{a} libcamd2{a} libccolamd2{a} libcholmod3{a} libcolamd2{a} libcroco3{a} libcups2{a} libcurl3-gnutls{a} libcxsparse3{a} libdatrie1{a} libdbus-1-3{a} libde265-0{a} libdouble-conversion1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-etnaviv1{a} libdrm-freedreno1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm-tegra0{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libflac8{a} libfltk-gl1.3{a} libfltk1.3{a} libfontconfig1{a} libfontconfig1-dev{a} libfreetype6{a} libfreetype6-dev{a} libfribidi-dev{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf2.0-0{a} libgdk-pixbuf2.0-bin{a} libgdk-pixbuf2.0-common{a} libgdk-pixbuf2.0-dev{a} libgfortran-8-dev{a} libgfortran5{a} libgirepository-1.0-1{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libgl2ps1.4{a} libglapi-mesa{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglibmm-2.4-1v5{a} libglibmm-2.4-dev{a} libglpk40{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphicsmagick++-q16-12{a} libgraphicsmagick-q16-3{a} libgraphite2-3{a} libgraphite2-dev{a} libgsl-dev{a} libgsl23{a} libgslcblas0{a} libgssapi-krb5-2{a} libgtk2.0-0{a} libgtk2.0-common{a} libgtk2.0-dev{a} libgtkglext1{a} libgtkglext1-dev{a} libgtkmm-2.4-1v5{a} libgtkmm-2.4-dev{a} libgudev-1.0-0{a} libharfbuzz-dev{a} libharfbuzz-gobject0{a} libharfbuzz-icu0{a} libharfbuzz0b{a} libhdf5-103{a} libhdf5-cpp-103{a} libhdf5-dev{a} libheif1{a} libice-dev{a} libice6{a} libicu-dev{a} libicu63{a} libinput-bin{a} libinput10{a} libjack-jackd2-0{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libklu1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.4-2{a} libldap-common{a} libllvm7{a} liblqr-1-0{a} libltdl7{a} liblzo2-2{a} libmagic-mgc{a} libmagic1{a} libmagickcore-6.q16-6{a} libmagickwand-6.q16-6{a} libmetis5{a} libmng1{a} libmount-dev{a} libmpdec2{a} libmtdev1{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnuma1{a} liboctave-dev{a} liboctave6{a} libogg0{a} libopengl0{a} libopenjp2-7{a} libopus0{a} libpango-1.0-0{a} libpango1.0-dev{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpangomm-1.4-1v5{a} libpangomm-1.4-dev{a} libpangox-1.0-0{a} libpangox-1.0-dev{a} libpangoxft-1.0-0{a} libpcre16-3{a} libpcre2-16-0{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpng-dev{a} libpng16-16{a} libportaudio2{a} libpsl5{a} libpthread-stubs0-dev{a} libpython-stdlib{a} libpython2-stdlib{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libqhull7{a} libqrupdate1{a} libqscintilla2-qt5-13{a} libqscintilla2-qt5-l10n{a} libqt4-dbus{a} libqt4-declarative{a} libqt4-designer{a} libqt4-dev{a} libqt4-dev-bin{a} libqt4-help{a} libqt4-network{a} libqt4-opengl{a} libqt4-opengl-dev{a} libqt4-qt3support{a} libqt4-script{a} libqt4-scripttools{a} libqt4-sql{a} libqt4-svg{a} libqt4-test{a} libqt4-xml{a} libqt4-xmlpatterns{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5help5{a} libqt5network5{a} libqt5opengl5{a} libqt5printsupport5{a} libqt5sql5{a} libqt5widgets5{a} libqtcore4{a} libqtdbus4{a} libqtgui4{a} libreadline-dev{a} libreadline7{a} librsvg2-2{a} librsvg2-common{a} librtmp1{a} libsamplerate0{a} libsasl2-2{a} libsasl2-modules-db{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol1-dev{a} libsigc++-2.0-dev{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libsndfile1{a} libssh2-1{a} libssl1.1{a} libsuitesparseconfig5{a} libsz2{a} libtext-unidecode-perl{a} libthai-data{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libumfpack5{a} libvorbis0a{a} libvorbisenc2{a} libwacom-common{a} libwacom2{a} libwayland-client0{a} libwayland-server0{a} libwebp6{a} libwebpmux3{a} libwmf0.2-7{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb-dev{a} libx11-xcb1{a} libx265-165{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri2-0-dev{a} libxcb-dri3-0{a} libxcb-dri3-dev{a} libxcb-glx0{a} libxcb-glx0-dev{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present-dev{a} libxcb-present0{a} libxcb-randr0{a} libxcb-randr0-dev{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shape0{a} libxcb-shape0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb-sync-dev{a} libxcb-sync1{a} libxcb-util0{a} libxcb-xfixes0{a} libxcb-xfixes0-dev{a} libxcb-xinerama0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcomposite-dev{a} libxcomposite1{a} libxcursor-dev{a} libxcursor1{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi-dev{a} libxi6{a} libxinerama-dev{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml-libxml-perl{a} libxml-namespacesupport-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml2{a} libxml2-utils{a} libxmu-dev{a} libxmu-headers{a} libxmu6{a} libxrandr-dev{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence-dev{a} libxshmfence1{a} libxt-dev{a} libxt6{a} libxxf86vm-dev{a} libxxf86vm1{a} lsb-base{a} m4{a} man-db{a} matlab-support-dev{a} mesa-common-dev{a} mime-support{a} octave{a} octave-common{a} pango1.0-tools{a} pkg-config{a} po-debconf{a} python{a} python-minimal{a} python2{a} python2-minimal{a} python2.7{a} python2.7-minimal{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} qdbus{a} qt4-linguist-tools{a} qt4-qmake{a} qtchooser{a} qtcore4-l10n{a} readline-common{a} sensible-utils{a} shared-mime-info{a} tex-common{a} texinfo{a} ucf{a} uuid-dev{a} x11-common{a} x11proto-composite-dev{a} x11proto-core-dev{a} x11proto-damage-dev{a} x11proto-dev{a} x11proto-fixes-dev{a} x11proto-input-dev{a} x11proto-randr-dev{a} x11proto-xext-dev{a} x11proto-xf86vidmode-dev{a} x11proto-xinerama-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus default-jre-headless epstool fonts-freefont-otf ghostscript gnuplot-nox gnuplot-qt gnuplot-x11 gsfonts krb5-locales libarchive-cpio-perl libatlas3-base libgail-common libgpm2 libgtk2.0-bin libltdl-dev libmagickcore-6.q16-6-extra libmail-sendmail-perl libopenblas-base libpng-tools libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite libqt4-sql-sqlite2 libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 libsasl2-modules libwacom-bin libwww-perl libxml-sax-expat-perl lynx netpbm octave-doc pstoedit publicsuffix qt-at-spi qt5-gtk-platformtheme qttranslations5-l10n wget xdg-user-dirs 0 packages upgraded, 430 newly installed, 0 to remove and 0 not upgraded. Need to get 191 MB of archives. After unpacking 950 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 libpython2.7-minimal arm64 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 python2.7-minimal arm64 2.7.16-2+deb10u1 [1292 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 python2-minimal arm64 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 python-minimal arm64 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libpython2.7-stdlib arm64 2.7.16-2+deb10u1 [1890 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 python2.7 arm64 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 libpython2-stdlib arm64 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libpython-stdlib arm64 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 python2 arm64 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 python arm64 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 libfftw3-double3 arm64 3.3.8-2 [385 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 libpng16-16 arm64 1.6.36-6 [287 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 libfreetype6 arm64 2.9.1-3+deb10u1 [355 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 ucf all 3.0038+nmu1 [69.0 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 fontconfig-config all 2.13.1-2 [280 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 libfontconfig1 arm64 2.13.1-2 [343 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 libde265-0 arm64 1.0.3-1+b1 [205 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 libnuma1 arm64 2.0.12-1 [25.6 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 libx265-165 arm64 2.9-4 [536 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 libheif1 arm64 1.3.2-2~deb10u1 [114 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 libjbig0 arm64 2.1-3.1+b2 [27.8 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 libjpeg62-turbo arm64 1:1.5.2-2+b1 [115 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 liblcms2-2 arm64 2.9-3 [137 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 liblqr-1-0 arm64 0.4.2-2.1 [23.9 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 libltdl7 arm64 2.4.6-9 [389 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 libopenjp2-7 arm64 2.3.0-2+deb10u1 [148 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 libwebp6 arm64 0.6.1-2 [233 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 libtiff5 arm64 4.1.0+git191117-2~deb10u1 [259 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 libwebpmux3 arm64 0.6.1-2 [95.4 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 libxau6 arm64 1:1.0.8-1+b2 [19.3 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 libxcb1 arm64 1.13.1-2 [135 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 libx11-data all 2:1.6.7-1 [298 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 libx11-6 arm64 2:1.6.7-1 [735 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 libxext6 arm64 2:1.3.3-1+b2 [48.6 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 imagemagick-6-common all 8:6.9.10.23+dfsg-2.1 [200 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 libmagickcore-6.q16-6 arm64 8:6.9.10.23+dfsg-2.1 [1593 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 libmagickwand-6.q16-6 arm64 8:6.9.10.23+dfsg-2.1 [387 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 libpython3.7-minimal arm64 3.7.3-2+deb10u1 [588 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 python3.7-minimal arm64 3.7.3-2+deb10u1 [1404 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 python3-minimal arm64 3.7.3-1 [36.6 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 libmpdec2 arm64 2.4.2-2 [77.7 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 libpython3.7-stdlib arm64 3.7.3-2+deb10u1 [1640 kB] Get: 60 http://deb.debian.org/debian buster/main arm64 python3.7 arm64 3.7.3-2+deb10u1 [330 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 libpython3-stdlib arm64 3.7.3-1 [20.0 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 python3 arm64 3.7.3-1 [61.5 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 tex-common all 6.11 [53.1 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 65 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 69 http://deb.debian.org/debian buster/main arm64 shared-mime-info arm64 1.10-1 [764 kB] Get: 70 http://deb.debian.org/debian buster/main arm64 libgdk-pixbuf2.0-common all 2.38.1+dfsg-1 [316 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 libgdk-pixbuf2.0-0 arm64 2.38.1+dfsg-1 [166 kB] Get: 72 http://deb.debian.org/debian buster/main arm64 gtk-update-icon-cache arm64 3.24.5-1 [81.0 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 libpixman-1-0 arm64 0.36.0-1 [436 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libxcb-render0 arm64 1.13.1-2 [108 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libxcb-shm0 arm64 1.13.1-2 [99.3 kB] Get: 76 http://deb.debian.org/debian buster/main arm64 libxrender1 arm64 1:0.9.10-1 [30.4 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 libcairo2 arm64 1.16.0-4 [644 kB] Get: 78 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 79 http://deb.debian.org/debian buster/main arm64 fontconfig arm64 2.13.1-2 [405 kB] Get: 80 http://deb.debian.org/debian buster/main arm64 libfribidi0 arm64 1.0.5-3.1+deb10u1 [63.6 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 libthai-data all 0.1.28-2 [170 kB] Get: 82 http://deb.debian.org/debian buster/main arm64 libdatrie1 arm64 0.2.12-2 [38.6 kB] Get: 83 http://deb.debian.org/debian buster/main arm64 libthai0 arm64 0.1.28-2 [52.8 kB] Get: 84 http://deb.debian.org/debian buster/main arm64 libpango-1.0-0 arm64 1.42.4-8~deb10u1 [179 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 libgraphite2-3 arm64 1.3.13-7 [75.8 kB] Get: 86 http://deb.debian.org/debian buster/main arm64 libharfbuzz0b arm64 2.3.1-1 [1155 kB] Get: 87 http://deb.debian.org/debian buster/main arm64 libpangoft2-1.0-0 arm64 1.42.4-8~deb10u1 [65.7 kB] Get: 88 http://deb.debian.org/debian buster/main arm64 libpangocairo-1.0-0 arm64 1.42.4-8~deb10u1 [54.0 kB] Get: 89 http://deb.debian.org/debian buster/main arm64 librsvg2-2 arm64 2.44.10-2.1 [1048 kB] Get: 90 http://deb.debian.org/debian buster/main arm64 librsvg2-common arm64 2.44.10-2.1 [23.3 kB] Get: 91 http://deb.debian.org/debian buster/main arm64 adwaita-icon-theme all 3.30.1-1 [11.7 MB] Get: 92 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 93 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 94 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 95 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 96 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 97 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 98 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 99 http://deb.debian.org/debian buster/main arm64 bc arm64 1.07.1-2+b1 [104 kB] Get: 100 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 101 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 102 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 103 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 104 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 105 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 106 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 107 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 108 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 109 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 110 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 111 http://deb.debian.org/debian buster/main arm64 libgfortran5 arm64 8.3.0-6 [298 kB] Get: 112 http://deb.debian.org/debian buster/main arm64 libgfortran-8-dev arm64 8.3.0-6 [346 kB] Get: 113 http://deb.debian.org/debian buster/main arm64 gfortran-8 arm64 8.3.0-6 [7861 kB] Get: 114 http://deb.debian.org/debian buster/main arm64 gfortran arm64 4:8.3.0-1 [1420 B] Get: 115 http://deb.debian.org/debian buster/main arm64 libgirepository-1.0-1 arm64 1.58.3-2 [85.1 kB] Get: 116 http://deb.debian.org/debian buster/main arm64 gir1.2-glib-2.0 arm64 1.58.3-2 [143 kB] Get: 117 http://deb.debian.org/debian buster/main arm64 libatk1.0-data all 2.30.0-2 [145 kB] Get: 118 http://deb.debian.org/debian buster/main arm64 libatk1.0-0 arm64 2.30.0-2 [48.3 kB] Get: 119 http://deb.debian.org/debian buster/main arm64 gir1.2-atk-1.0 arm64 2.30.0-2 [25.3 kB] Get: 120 http://deb.debian.org/debian buster/main arm64 libcairo-gobject2 arm64 1.16.0-4 [124 kB] Get: 121 http://deb.debian.org/debian buster/main arm64 gir1.2-freedesktop arm64 1.58.3-2 [20.3 kB] Get: 122 http://deb.debian.org/debian buster/main arm64 gir1.2-gdkpixbuf-2.0 arm64 2.38.1+dfsg-1 [18.3 kB] Get: 123 http://deb.debian.org/debian buster/main arm64 libgtk2.0-common all 2.24.32-3 [2698 kB] Get: 124 http://deb.debian.org/debian buster/main arm64 libxft2 arm64 2.3.2-2 [51.3 kB] Get: 125 http://deb.debian.org/debian buster/main arm64 libpangoxft-1.0-0 arm64 1.42.4-8~deb10u1 [49.1 kB] Get: 126 http://deb.debian.org/debian buster/main arm64 gir1.2-pango-1.0 arm64 1.42.4-8~deb10u1 [55.8 kB] Get: 127 http://deb.debian.org/debian buster/main arm64 libavahi-common-data arm64 0.7-4+b1 [122 kB] Get: 128 http://deb.debian.org/debian buster/main arm64 libavahi-common3 arm64 0.7-4+b1 [53.5 kB] Get: 129 http://deb.debian.org/debian buster/main arm64 libdbus-1-3 arm64 1.12.16-1 [204 kB] Get: 130 http://deb.debian.org/debian buster/main arm64 libavahi-client3 arm64 0.7-4+b1 [56.8 kB] Get: 131 http://deb.debian.org/debian buster/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get: 132 http://deb.debian.org/debian buster/main arm64 libkrb5support0 arm64 1.17-3 [64.7 kB] Get: 133 http://deb.debian.org/debian buster/main arm64 libk5crypto3 arm64 1.17-3 [122 kB] Get: 134 http://deb.debian.org/debian buster/main arm64 libkrb5-3 arm64 1.17-3 [353 kB] Get: 135 http://deb.debian.org/debian buster/main arm64 libgssapi-krb5-2 arm64 1.17-3 [150 kB] Get: 136 http://deb.debian.org/debian buster/main arm64 libcups2 arm64 2.2.10-6+deb10u3 [310 kB] Get: 137 http://deb.debian.org/debian buster/main arm64 libxcomposite1 arm64 1:0.4.4-2 [16.1 kB] Get: 138 http://deb.debian.org/debian buster/main arm64 libxfixes3 arm64 1:5.0.3-1 [21.0 kB] Get: 139 http://deb.debian.org/debian buster/main arm64 libxcursor1 arm64 1:1.1.15-2 [36.0 kB] Get: 140 http://deb.debian.org/debian buster/main arm64 libxdamage1 arm64 1:1.1.4-3+b3 [14.8 kB] Get: 141 http://deb.debian.org/debian buster/main arm64 libxi6 arm64 2:1.7.9-1 [79.0 kB] Get: 142 http://deb.debian.org/debian buster/main arm64 libxinerama1 arm64 2:1.1.4-2 [17.7 kB] Get: 143 http://deb.debian.org/debian buster/main arm64 libxrandr2 arm64 2:1.5.1-1 [35.3 kB] Get: 144 http://deb.debian.org/debian buster/main arm64 libgtk2.0-0 arm64 2.24.32-3 [1676 kB] Get: 145 http://deb.debian.org/debian buster/main arm64 gir1.2-gtk-2.0 arm64 2.24.32-3 [213 kB] Get: 146 http://deb.debian.org/debian buster/main arm64 libharfbuzz-gobject0 arm64 2.3.1-1 [847 kB] Get: 147 http://deb.debian.org/debian buster/main arm64 gir1.2-harfbuzz-0.0 arm64 2.3.1-1 [853 kB] Get: 148 http://deb.debian.org/debian buster/main arm64 hdf5-helpers arm64 1.10.4+repack-10 [35.2 kB] Get: 149 http://deb.debian.org/debian buster/main arm64 icu-devtools arm64 63.1-6+deb10u1 [179 kB] Get: 150 http://deb.debian.org/debian buster/main arm64 imagemagick-6.q16 arm64 8:6.9.10.23+dfsg-2.1 [580 kB] Get: 151 http://deb.debian.org/debian buster/main arm64 imagemagick arm64 8:6.9.10.23+dfsg-2.1 [156 kB] Get: 152 http://deb.debian.org/debian buster/main arm64 libaec0 arm64 1.0.2-1 [18.8 kB] Get: 153 http://deb.debian.org/debian buster/main arm64 libsz2 arm64 1.0.2-1 [6456 B] Get: 154 http://deb.debian.org/debian buster/main arm64 libaec-dev arm64 1.0.2-1 [17.1 kB] Get: 155 http://deb.debian.org/debian buster/main arm64 libsuitesparseconfig5 arm64 1:5.4.0+dfsg-1 [20.7 kB] Get: 156 http://deb.debian.org/debian buster/main arm64 libamd2 arm64 1:5.4.0+dfsg-1 [30.7 kB] Get: 157 http://deb.debian.org/debian buster/main arm64 libblas3 arm64 3.8.0-2 [100 kB] Get: 158 http://deb.debian.org/debian buster/main arm64 liblapack3 arm64 3.8.0-2 [1489 kB] Get: 159 http://deb.debian.org/debian buster/main arm64 libarpack2 arm64 3.7.0-2 [81.7 kB] Get: 160 http://deb.debian.org/debian buster/main arm64 libasound2-data all 1.1.8-1 [59.6 kB] Get: 161 http://deb.debian.org/debian buster/main arm64 libasound2 arm64 1.1.8-1 [333 kB] Get: 162 http://deb.debian.org/debian buster/main arm64 pkg-config arm64 0.29-6 [62.2 kB] Get: 163 http://deb.debian.org/debian buster/main arm64 libffi-dev arm64 3.2.1-9 [155 kB] Get: 164 http://deb.debian.org/debian buster/main arm64 libglib2.0-data all 2.58.3-2+deb10u2 [1110 kB] Get: 165 http://deb.debian.org/debian buster/main arm64 libglib2.0-bin arm64 2.58.3-2+deb10u2 [122 kB] Get: 166 http://deb.debian.org/debian buster/main arm64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 167 http://deb.debian.org/debian buster/main arm64 python3-distutils all 3.7.3-1 [142 kB] Get: 168 http://deb.debian.org/debian buster/main arm64 libglib2.0-dev-bin arm64 2.58.3-2+deb10u2 [156 kB] Get: 169 http://deb.debian.org/debian buster/main arm64 uuid-dev arm64 2.33.1-0.1 [93.8 kB] Get: 170 http://deb.debian.org/debian buster/main arm64 libblkid-dev arm64 2.33.1-0.1 [229 kB] Get: 171 http://deb.debian.org/debian buster/main arm64 libmount-dev arm64 2.33.1-0.1 [238 kB] Get: 172 http://deb.debian.org/debian buster/main arm64 libpcre16-3 arm64 2:8.39-12 [236 kB] Get: 173 http://deb.debian.org/debian buster/main arm64 libpcre32-3 arm64 2:8.39-12 [230 kB] Get: 174 http://deb.debian.org/debian buster/main arm64 libpcrecpp0v5 arm64 2:8.39-12 [151 kB] Get: 175 http://deb.debian.org/debian buster/main arm64 libpcre3-dev arm64 2:8.39-12 [578 kB] Get: 176 http://deb.debian.org/debian buster/main arm64 libsepol1-dev arm64 2.8-1 [308 kB] Get: 177 http://deb.debian.org/debian buster/main arm64 libselinux1-dev arm64 2.8-1+b1 [163 kB] Get: 178 http://deb.debian.org/debian buster/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1 [210 kB] Get: 179 http://deb.debian.org/debian buster/main arm64 libglib2.0-dev arm64 2.58.3-2+deb10u2 [1509 kB] Get: 180 http://deb.debian.org/debian buster/main arm64 libatk1.0-dev arm64 2.30.0-2 [88.3 kB] Get: 181 http://deb.debian.org/debian buster/main arm64 libglibmm-2.4-1v5 arm64 2.58.0-2 [700 kB] Get: 182 http://deb.debian.org/debian buster/main arm64 libatkmm-1.6-1v5 arm64 2.28.0-2 [67.4 kB] Get: 183 http://deb.debian.org/debian buster/main arm64 libsigc++-2.0-dev arm64 2.10.1-2 [118 kB] Get: 184 http://deb.debian.org/debian buster/main arm64 libglibmm-2.4-dev arm64 2.58.0-2 [628 kB] Get: 185 http://deb.debian.org/debian buster/main arm64 libatkmm-1.6-dev arm64 2.28.0-2 [40.6 kB] Get: 186 http://deb.debian.org/debian buster/main arm64 lsb-base all 10.2019051400 [28.4 kB] Get: 187 http://deb.debian.org/debian buster/main arm64 x11-common all 1:7.7+19 [251 kB] Get: 188 http://deb.debian.org/debian buster/main arm64 libice6 arm64 2:1.0.9-2 [52.0 kB] Get: 189 http://deb.debian.org/debian buster/main arm64 libsm6 arm64 2:1.2.3-1 [34.0 kB] Get: 190 http://deb.debian.org/debian buster/main arm64 libxt6 arm64 1:1.1.5-1+b3 [175 kB] Get: 191 http://deb.debian.org/debian buster/main arm64 libaudio2 arm64 1.9.4-6 [73.4 kB] Get: 192 http://deb.debian.org/debian buster/main arm64 libblas-dev arm64 3.8.0-2 [105 kB] Get: 193 http://deb.debian.org/debian buster/main arm64 libbtf1 arm64 1:5.4.0+dfsg-1 [22.1 kB] Get: 194 http://deb.debian.org/debian buster/main arm64 liblzo2-2 arm64 2.10-0.1 [49.0 kB] Get: 195 http://deb.debian.org/debian buster/main arm64 libcairo-script-interpreter2 arm64 1.16.0-4 [157 kB] Get: 196 http://deb.debian.org/debian buster/main arm64 libexpat1-dev arm64 2.2.6-2+deb10u1 [128 kB] Get: 197 http://deb.debian.org/debian buster/main arm64 libpng-dev arm64 1.6.36-6 [297 kB] Get: 198 http://deb.debian.org/debian buster/main arm64 libfreetype6-dev arm64 2.9.1-3+deb10u1 [526 kB] Get: 199 http://deb.debian.org/debian buster/main arm64 libfontconfig1-dev arm64 2.13.1-2 [964 kB] Get: 200 http://deb.debian.org/debian buster/main arm64 xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get: 201 http://deb.debian.org/debian buster/main arm64 x11proto-dev all 2018.4-4 [251 kB] Get: 202 http://deb.debian.org/debian buster/main arm64 x11proto-core-dev all 2018.4-4 [3128 B] Get: 203 http://deb.debian.org/debian buster/main arm64 libxau-dev arm64 1:1.0.8-1+b2 [22.8 kB] Get: 204 http://deb.debian.org/debian buster/main arm64 libxdmcp-dev arm64 1:1.1.2-3 [41.2 kB] Get: 205 http://deb.debian.org/debian buster/main arm64 x11proto-input-dev all 2018.4-4 [3132 B] Get: 206 http://deb.debian.org/debian buster/main arm64 xtrans-dev all 1.3.5-1 [100 kB] Get: 207 http://deb.debian.org/debian buster/main arm64 libpthread-stubs0-dev arm64 0.4-1 [5336 B] Get: 208 http://deb.debian.org/debian buster/main arm64 libxcb1-dev arm64 1.13.1-2 [174 kB] Get: 209 http://deb.debian.org/debian buster/main arm64 libx11-dev arm64 2:1.6.7-1 [816 kB] Get: 210 http://deb.debian.org/debian buster/main arm64 libxrender-dev arm64 1:0.9.10-1 [38.8 kB] Get: 211 http://deb.debian.org/debian buster/main arm64 x11proto-xext-dev all 2018.4-4 [3128 B] Get: 212 http://deb.debian.org/debian buster/main arm64 libxext-dev arm64 2:1.3.3-1+b2 [104 kB] Get: 213 http://deb.debian.org/debian buster/main arm64 libice-dev arm64 2:1.0.9-2 [62.0 kB] Get: 214 http://deb.debian.org/debian buster/main arm64 libsm-dev arm64 2:1.2.3-1 [37.4 kB] Get: 215 http://deb.debian.org/debian buster/main arm64 libpixman-1-dev arm64 0.36.0-1 [453 kB] Get: 216 http://deb.debian.org/debian buster/main arm64 libxcb-render0-dev arm64 1.13.1-2 [113 kB] Get: 217 http://deb.debian.org/debian buster/main arm64 libxcb-shm0-dev arm64 1.13.1-2 [101 kB] Get: 218 http://deb.debian.org/debian buster/main arm64 libcairo2-dev arm64 1.16.0-4 [706 kB] Get: 219 http://deb.debian.org/debian buster/main arm64 libcairomm-1.0-1v5 arm64 1.12.2-4 [62.1 kB] Get: 220 http://deb.debian.org/debian buster/main arm64 libcairomm-1.0-dev arm64 1.12.2-4 [604 kB] Get: 221 http://deb.debian.org/debian buster/main arm64 libcamd2 arm64 1:5.4.0+dfsg-1 [31.8 kB] Get: 222 http://deb.debian.org/debian buster/main arm64 libccolamd2 arm64 1:5.4.0+dfsg-1 [34.2 kB] Get: 223 http://deb.debian.org/debian buster/main arm64 libcolamd2 arm64 1:5.4.0+dfsg-1 [29.2 kB] Get: 224 http://deb.debian.org/debian buster/main arm64 libmetis5 arm64 5.1.0.dfsg-5+b2 [146 kB] Get: 225 http://deb.debian.org/debian buster/main arm64 libcholmod3 arm64 1:5.4.0+dfsg-1 [281 kB] Get: 226 http://deb.debian.org/debian buster/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1+deb10u1 [69.3 kB] Get: 227 http://deb.debian.org/debian buster/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1+deb10u1 [105 kB] Get: 228 http://deb.debian.org/debian buster/main arm64 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 229 http://deb.debian.org/debian buster/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3+deb10u2 [216 kB] Get: 230 http://deb.debian.org/debian buster/main arm64 libnghttp2-14 arm64 1.36.0-2+deb10u1 [81.9 kB] Get: 231 http://deb.debian.org/debian buster/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get: 232 http://deb.debian.org/debian buster/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [55.7 kB] Get: 233 http://deb.debian.org/debian buster/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get: 234 http://deb.debian.org/debian buster/main arm64 libcurl3-gnutls arm64 7.64.0-4+deb10u1 [310 kB] Get: 235 http://deb.debian.org/debian buster/main arm64 libcxsparse3 arm64 1:5.4.0+dfsg-1 [69.1 kB] Get: 236 http://deb.debian.org/debian buster/main arm64 libdouble-conversion1 arm64 3.1.0-3 [36.0 kB] Get: 237 http://deb.debian.org/debian buster/main arm64 libdrm-common all 2.4.97-1 [13.8 kB] Get: 238 http://deb.debian.org/debian buster/main arm64 libdrm2 arm64 2.4.97-1 [39.5 kB] Get: 239 http://deb.debian.org/debian buster/main arm64 libdrm-amdgpu1 arm64 2.4.97-1 [26.6 kB] Get: 240 http://deb.debian.org/debian buster/main arm64 libdrm-radeon1 arm64 2.4.97-1 [30.0 kB] Get: 241 http://deb.debian.org/debian buster/main arm64 libdrm-nouveau2 arm64 2.4.97-1 [25.5 kB] Get: 242 http://deb.debian.org/debian buster/main arm64 libdrm-freedreno1 arm64 2.4.97-1 [27.8 kB] Get: 243 http://deb.debian.org/debian buster/main arm64 libdrm-tegra0 arm64 2.4.97-1 [15.8 kB] Get: 244 http://deb.debian.org/debian buster/main arm64 libdrm-etnaviv1 arm64 2.4.97-1 [21.0 kB] Get: 245 http://deb.debian.org/debian buster/main arm64 libdrm-dev arm64 2.4.97-1 [135 kB] Get: 246 http://deb.debian.org/debian buster/main arm64 libedit2 arm64 3.1-20181209-1 [91.2 kB] Get: 247 http://deb.debian.org/debian buster/main arm64 libwayland-server0 arm64 1.16.0-1 [31.8 kB] Get: 248 http://deb.debian.org/debian buster/main arm64 libgbm1 arm64 18.3.6-2+deb10u1 [67.1 kB] Get: 249 http://deb.debian.org/debian buster/main arm64 libglapi-mesa arm64 18.3.6-2+deb10u1 [74.8 kB] Get: 250 http://deb.debian.org/debian buster/main arm64 libwayland-client0 arm64 1.16.0-1 [25.9 kB] Get: 251 http://deb.debian.org/debian buster/main arm64 libx11-xcb1 arm64 2:1.6.7-1 [190 kB] Get: 252 http://deb.debian.org/debian buster/main arm64 libxcb-dri2-0 arm64 1.13.1-2 [101 kB] Get: 253 http://deb.debian.org/debian buster/main arm64 libxcb-dri3-0 arm64 1.13.1-2 [100 kB] Get: 254 http://deb.debian.org/debian buster/main arm64 libxcb-present0 arm64 1.13.1-2 [99.1 kB] Get: 255 http://deb.debian.org/debian buster/main arm64 libxcb-sync1 arm64 1.13.1-2 [102 kB] Get: 256 http://deb.debian.org/debian buster/main arm64 libxcb-xfixes0 arm64 1.13.1-2 [103 kB] Get: 257 http://deb.debian.org/debian buster/main arm64 libxshmfence1 arm64 1.3-1 [8712 B] Get: 258 http://deb.debian.org/debian buster/main arm64 libegl-mesa0 arm64 18.3.6-2+deb10u1 [130 kB] Get: 259 http://deb.debian.org/debian buster/main arm64 libeigen3-dev all 3.3.7-1 [850 kB] Get: 260 http://deb.debian.org/debian buster/main arm64 libevdev2 arm64 1.6.0+dfsg-1 [29.2 kB] Get: 261 http://deb.debian.org/debian buster/main arm64 libfftw3-long3 arm64 3.3.8-2 [526 kB] Get: 262 http://deb.debian.org/debian buster/main arm64 libfftw3-single3 arm64 3.3.8-2 [630 kB] Get: 263 http://deb.debian.org/debian buster/main arm64 libfftw3-bin arm64 3.3.8-2 [47.4 kB] Get: 264 http://deb.debian.org/debian buster/main arm64 libfftw3-dev arm64 3.3.8-2 [1455 kB] Get: 265 http://deb.debian.org/debian buster/main arm64 libogg0 arm64 1.3.2-1+b1 [18.4 kB] Get: 266 http://deb.debian.org/debian buster/main arm64 libflac8 arm64 1.3.2-3 [177 kB] Get: 267 http://deb.debian.org/debian buster/main arm64 libfltk1.3 arm64 1.3.4-9 [523 kB] Get: 268 http://deb.debian.org/debian buster/main arm64 libglvnd0 arm64 1.1.0-1 [42.4 kB] Get: 269 http://deb.debian.org/debian buster/main arm64 libxcb-glx0 arm64 1.13.1-2 [116 kB] Get: 270 http://deb.debian.org/debian buster/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b2 [20.1 kB] Get: 271 http://deb.debian.org/debian buster/main arm64 libllvm7 arm64 1:7.0.1-8 [10.8 MB] Get: 272 http://deb.debian.org/debian buster/main arm64 libsensors-config all 1:3.5.0-3 [31.6 kB] Get: 273 http://deb.debian.org/debian buster/main arm64 libsensors5 arm64 1:3.5.0-3 [51.8 kB] Get: 274 http://deb.debian.org/debian buster/main arm64 libgl1-mesa-dri arm64 18.3.6-2+deb10u1 [4910 kB] Get: 275 http://deb.debian.org/debian buster/main arm64 libglx-mesa0 arm64 18.3.6-2+deb10u1 [180 kB] Get: 276 http://deb.debian.org/debian buster/main arm64 libglx0 arm64 1.1.0-1 [29.0 kB] Get: 277 http://deb.debian.org/debian buster/main arm64 libgl1 arm64 1.1.0-1 [92.5 kB] Get: 278 http://deb.debian.org/debian buster/main arm64 libglu1-mesa arm64 9.0.0-2.1+b3 [146 kB] Get: 279 http://deb.debian.org/debian buster/main arm64 libfltk-gl1.3 arm64 1.3.4-9 [70.0 kB] Get: 280 http://deb.debian.org/debian buster/main arm64 libfribidi-dev arm64 1.0.5-3.1+deb10u1 [101 kB] Get: 281 http://deb.debian.org/debian buster/main arm64 libgdk-pixbuf2.0-bin arm64 2.38.1+dfsg-1 [24.0 kB] Get: 282 http://deb.debian.org/debian buster/main arm64 libgdk-pixbuf2.0-dev arm64 2.38.1+dfsg-1 [49.5 kB] Get: 283 http://deb.debian.org/debian buster/main arm64 mesa-common-dev arm64 18.3.6-2+deb10u1 [611 kB] Get: 284 http://deb.debian.org/debian buster/main arm64 libglvnd-core-dev arm64 1.1.0-1 [13.2 kB] Get: 285 http://deb.debian.org/debian buster/main arm64 libegl1 arm64 1.1.0-1 [32.8 kB] Get: 286 http://deb.debian.org/debian buster/main arm64 libgles1 arm64 1.1.0-1 [14.3 kB] Get: 287 http://deb.debian.org/debian buster/main arm64 libgles2 arm64 1.1.0-1 [19.8 kB] Get: 288 http://deb.debian.org/debian buster/main arm64 libopengl0 arm64 1.1.0-1 [34.4 kB] Get: 289 http://deb.debian.org/debian buster/main arm64 libglvnd-dev arm64 1.1.0-1 [5128 B] Get: 290 http://deb.debian.org/debian buster/main arm64 libx11-xcb-dev arm64 2:1.6.7-1 [192 kB] Get: 291 http://deb.debian.org/debian buster/main arm64 libxcb-dri3-dev arm64 1.13.1-2 [101 kB] Get: 292 http://deb.debian.org/debian buster/main arm64 libxcb-randr0 arm64 1.13.1-2 [110 kB] Get: 293 http://deb.debian.org/debian buster/main arm64 libxcb-randr0-dev arm64 1.13.1-2 [115 kB] Get: 294 http://deb.debian.org/debian buster/main arm64 libxcb-shape0 arm64 1.13.1-2 [99.6 kB] Get: 295 http://deb.debian.org/debian buster/main arm64 libxcb-shape0-dev arm64 1.13.1-2 [101 kB] Get: 296 http://deb.debian.org/debian buster/main arm64 libxcb-xfixes0-dev arm64 1.13.1-2 [106 kB] Get: 297 http://deb.debian.org/debian buster/main arm64 libxcb-sync-dev arm64 1.13.1-2 [105 kB] Get: 298 http://deb.debian.org/debian buster/main arm64 libxcb-present-dev arm64 1.13.1-2 [101 kB] Get: 299 http://deb.debian.org/debian buster/main arm64 libxshmfence-dev arm64 1.3-1 [8212 B] Get: 300 http://deb.debian.org/debian buster/main arm64 libxcb-dri2-0-dev arm64 1.13.1-2 [102 kB] Get: 301 http://deb.debian.org/debian buster/main arm64 libxcb-glx0-dev arm64 1.13.1-2 [122 kB] Get: 302 http://deb.debian.org/debian buster/main arm64 x11proto-fixes-dev all 1:2018.4-4 [3140 B] Get: 303 http://deb.debian.org/debian buster/main arm64 libxfixes-dev arm64 1:5.0.3-1 [23.2 kB] Get: 304 http://deb.debian.org/debian buster/main arm64 x11proto-damage-dev all 1:2018.4-4 [3140 B] Get: 305 http://deb.debian.org/debian buster/main arm64 libxdamage-dev arm64 1:1.1.4-3+b3 [14.8 kB] Get: 306 http://deb.debian.org/debian buster/main arm64 x11proto-xf86vidmode-dev all 2018.4-4 [3140 B] Get: 307 http://deb.debian.org/debian buster/main arm64 libxxf86vm-dev arm64 1:1.1.4-1+b2 [25.1 kB] Get: 308 http://deb.debian.org/debian buster/main arm64 libgl1-mesa-dev arm64 18.3.6-2+deb10u1 [48.0 kB] Get: 309 http://deb.debian.org/debian buster/main arm64 libgl2ps1.4 arm64 1.4.0+dfsg1-2 [33.5 kB] Get: 310 http://deb.debian.org/debian buster/main arm64 libglpk40 arm64 4.65-2 [336 kB] Get: 311 http://deb.debian.org/debian buster/main arm64 libglu1-mesa-dev arm64 9.0.0-2.1+b3 [186 kB] Get: 312 http://deb.debian.org/debian buster/main arm64 libwmf0.2-7 arm64 0.2.8.4-14 [152 kB] Get: 313 http://deb.debian.org/debian buster/main arm64 libgraphicsmagick-q16-3 arm64 1.4~hg15978-1+deb10u1 [1021 kB] Get: 314 http://deb.debian.org/debian buster/main arm64 libgraphicsmagick++-q16-12 arm64 1.4~hg15978-1+deb10u1 [123 kB] Get: 315 http://deb.debian.org/debian buster/main arm64 libgraphite2-dev arm64 1.3.13-7 [23.1 kB] Get: 316 http://deb.debian.org/debian buster/main arm64 libgslcblas0 arm64 2.5+dfsg-6 [69.5 kB] Get: 317 http://deb.debian.org/debian buster/main arm64 libgsl23 arm64 2.5+dfsg-6 [760 kB] Get: 318 http://deb.debian.org/debian buster/main arm64 libgsl-dev arm64 2.5+dfsg-6 [938 kB] Get: 319 http://deb.debian.org/debian buster/main arm64 libharfbuzz-icu0 arm64 2.3.1-1 [834 kB] Get: 320 http://deb.debian.org/debian buster/main arm64 libicu-dev arm64 63.1-6+deb10u1 [9062 kB] Get: 321 http://deb.debian.org/debian buster/main arm64 libharfbuzz-dev arm64 2.3.1-1 [1282 kB] Get: 322 http://deb.debian.org/debian buster/main arm64 libxft-dev arm64 2.3.2-2 [64.3 kB] Get: 323 http://deb.debian.org/debian buster/main arm64 pango1.0-tools arm64 1.42.4-8~deb10u1 [55.2 kB] Get: 324 http://deb.debian.org/debian buster/main arm64 libpango1.0-dev arm64 1.42.4-8~deb10u1 [139 kB] Get: 325 http://deb.debian.org/debian buster/main arm64 x11proto-xinerama-dev all 2018.4-4 [3132 B] Get: 326 http://deb.debian.org/debian buster/main arm64 libxinerama-dev arm64 2:1.1.4-2 [20.1 kB] Get: 327 http://deb.debian.org/debian buster/main arm64 libxi-dev arm64 2:1.7.9-1 [238 kB] Get: 328 http://deb.debian.org/debian buster/main arm64 x11proto-randr-dev all 2018.4-4 [3132 B] Get: 329 http://deb.debian.org/debian buster/main arm64 libxrandr-dev arm64 2:1.5.1-1 [43.7 kB] Get: 330 http://deb.debian.org/debian buster/main arm64 libxcursor-dev arm64 1:1.1.15-2 [44.5 kB] Get: 331 http://deb.debian.org/debian buster/main arm64 x11proto-composite-dev all 1:2018.4-4 [3140 B] Get: 332 http://deb.debian.org/debian buster/main arm64 libxcomposite-dev arm64 1:0.4.4-2 [19.9 kB] Get: 333 http://deb.debian.org/debian buster/main arm64 libxml2-utils arm64 2.9.4+dfsg1-7+b3 [98.0 kB] Get: 334 http://deb.debian.org/debian buster/main arm64 libgtk2.0-dev arm64 2.24.32-3 [2709 kB] Get: 335 http://deb.debian.org/debian buster/main arm64 libpangox-1.0-0 arm64 0.0.2-5+b2 [38.5 kB] Get: 336 http://deb.debian.org/debian buster/main arm64 libxmu6 arm64 2:1.1.2-2+b3 [57.8 kB] Get: 337 http://deb.debian.org/debian buster/main arm64 libgtkglext1 arm64 1.2.0-9 [81.1 kB] Get: 338 http://deb.debian.org/debian buster/main arm64 libpangox-1.0-dev arm64 0.0.2-5+b2 [41.5 kB] Get: 339 http://deb.debian.org/debian buster/main arm64 libxt-dev arm64 1:1.1.5-1+b3 [424 kB] Get: 340 http://deb.debian.org/debian buster/main arm64 libxmu-headers all 2:1.1.2-2 [51.9 kB] Get: 341 http://deb.debian.org/debian buster/main arm64 libxmu-dev arm64 2:1.1.2-2+b3 [65.5 kB] Get: 342 http://deb.debian.org/debian buster/main arm64 libgtkglext1-dev arm64 1.2.0-9 [368 kB] Get: 343 http://deb.debian.org/debian buster/main arm64 libpangomm-1.4-1v5 arm64 2.42.0-2 [57.0 kB] Get: 344 http://deb.debian.org/debian buster/main arm64 libgtkmm-2.4-1v5 arm64 1:2.24.5-4 [787 kB] Get: 345 http://deb.debian.org/debian buster/main arm64 libpangomm-1.4-dev arm64 2.42.0-2 [65.3 kB] Get: 346 http://deb.debian.org/debian buster/main arm64 libgtkmm-2.4-dev arm64 1:2.24.5-4 [611 kB] Get: 347 http://deb.debian.org/debian buster/main arm64 libgudev-1.0-0 arm64 232-2 [11.6 kB] Get: 348 http://deb.debian.org/debian buster/main arm64 libhdf5-103 arm64 1.10.4+repack-10 [1168 kB] Get: 349 http://deb.debian.org/debian buster/main arm64 libhdf5-cpp-103 arm64 1.10.4+repack-10 [132 kB] Get: 350 http://deb.debian.org/debian buster/main arm64 libjpeg62-turbo-dev arm64 1:1.5.2-2+b1 [186 kB] Get: 351 http://deb.debian.org/debian buster/main arm64 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get: 352 http://deb.debian.org/debian buster/main arm64 libhdf5-dev arm64 1.10.4+repack-10 [2683 kB] Get: 353 http://deb.debian.org/debian buster/main arm64 libwacom-common all 0.32-1 [39.1 kB] Get: 354 http://deb.debian.org/debian buster/main arm64 libwacom2 arm64 0.32-1 [17.9 kB] Get: 355 http://deb.debian.org/debian buster/main arm64 libinput-bin arm64 1.12.6-2 [16.9 kB] Get: 356 http://deb.debian.org/debian buster/main arm64 libmtdev1 arm64 1.1.5-1+b1 [21.3 kB] Get: 357 http://deb.debian.org/debian buster/main arm64 libinput10 arm64 1.12.6-2 [97.6 kB] Get: 358 http://deb.debian.org/debian buster/main arm64 libopus0 arm64 1.3-1 [171 kB] Get: 359 http://deb.debian.org/debian buster/main arm64 libsamplerate0 arm64 0.1.9-2 [942 kB] Get: 360 http://deb.debian.org/debian buster/main arm64 libjack-jackd2-0 arm64 1.9.12~dfsg-2 [286 kB] Get: 361 http://deb.debian.org/debian buster/main arm64 libklu1 arm64 1:5.4.0+dfsg-1 [71.8 kB] Get: 362 http://deb.debian.org/debian buster/main arm64 liblapack-dev arm64 3.8.0-2 [1524 kB] Get: 363 http://deb.debian.org/debian buster/main arm64 libmng1 arm64 1.0.10+dfsg-3.1+b5 [192 kB] Get: 364 http://deb.debian.org/debian buster/main arm64 libncurses-dev arm64 6.1+20181013-2+deb10u2 [324 kB] Get: 365 http://deb.debian.org/debian buster/main arm64 libqrupdate1 arm64 1.1.2-3 [31.5 kB] Get: 366 http://deb.debian.org/debian buster/main arm64 libumfpack5 arm64 1:5.4.0+dfsg-1 [197 kB] Get: 367 http://deb.debian.org/debian buster/main arm64 liboctave6 arm64 4.4.1-5 [6295 kB] Get: 368 http://deb.debian.org/debian buster/main arm64 libportaudio2 arm64 19.6.0-1 [54.9 kB] Get: 369 http://deb.debian.org/debian buster/main arm64 libqhull7 arm64 2015.2-4 [175 kB] Get: 370 http://deb.debian.org/debian buster/main arm64 libqscintilla2-qt5-l10n all 2.10.4+dfsg-2.1 [53.7 kB] Get: 371 http://deb.debian.org/debian buster/main arm64 libpcre2-16-0 arm64 10.32-5 [176 kB] Get: 372 http://deb.debian.org/debian buster/main arm64 libqt5core5a arm64 5.11.3+dfsg1-1+deb10u3 [1796 kB] Get: 373 http://deb.debian.org/debian buster/main arm64 libqt5dbus5 arm64 5.11.3+dfsg1-1+deb10u3 [217 kB] Get: 374 http://deb.debian.org/debian buster/main arm64 libqt5network5 arm64 5.11.3+dfsg1-1+deb10u3 [631 kB] Get: 375 http://deb.debian.org/debian buster/main arm64 libxcb-icccm4 arm64 0.4.1-1.1 [26.9 kB] Get: 376 http://deb.debian.org/debian buster/main arm64 libxcb-util0 arm64 0.3.8-3+b2 [22.5 kB] Get: 377 http://deb.debian.org/debian buster/main arm64 libxcb-image0 arm64 0.4.0-1+b2 [23.2 kB] Get: 378 http://deb.debian.org/debian buster/main arm64 libxcb-keysyms1 arm64 0.4.0-1+b2 [16.0 kB] Get: 379 http://deb.debian.org/debian buster/main arm64 libxcb-render-util0 arm64 0.3.9-1+b1 [17.5 kB] Get: 380 http://deb.debian.org/debian buster/main arm64 libxcb-xinerama0 arm64 1.13.1-2 [98.9 kB] Get: 381 http://deb.debian.org/debian buster/main arm64 libxcb-xkb1 arm64 1.13.1-2 [122 kB] Get: 382 http://deb.debian.org/debian buster/main arm64 xkb-data all 2.26-2 [681 kB] Get: 383 http://deb.debian.org/debian buster/main arm64 libxkbcommon0 arm64 0.8.2-1 [118 kB] Get: 384 http://deb.debian.org/debian buster/main arm64 libxkbcommon-x11-0 arm64 0.8.2-1 [39.0 kB] Get: 385 http://deb.debian.org/debian buster/main arm64 libqt5gui5 arm64 5.11.3+dfsg1-1+deb10u3 [2577 kB] Get: 386 http://deb.debian.org/debian buster/main arm64 libqt5widgets5 arm64 5.11.3+dfsg1-1+deb10u3 [2141 kB] Get: 387 http://deb.debian.org/debian buster/main arm64 libqt5printsupport5 arm64 5.11.3+dfsg1-1+deb10u3 [210 kB] Get: 388 http://deb.debian.org/debian buster/main arm64 libqscintilla2-qt5-13 arm64 2.10.4+dfsg-2.1 [952 kB] Get: 389 http://deb.debian.org/debian buster/main arm64 libqt5sql5 arm64 5.11.3+dfsg1-1+deb10u3 [139 kB] Get: 390 http://deb.debian.org/debian buster/main arm64 libqt5help5 arm64 5.11.3-4 [142 kB] Get: 391 http://deb.debian.org/debian buster/main arm64 libqt5opengl5 arm64 5.11.3+dfsg1-1+deb10u3 [153 kB] Get: 392 http://deb.debian.org/debian buster/main arm64 libvorbis0a arm64 1.3.6-2 [86.9 kB] Get: 393 http://deb.debian.org/debian buster/main arm64 libvorbisenc2 arm64 1.3.6-2 [80.0 kB] Get: 394 http://deb.debian.org/debian buster/main arm64 libsndfile1 arm64 1.0.28-6 [246 kB] Get: 395 http://deb.debian.org/debian buster/main arm64 libtext-unidecode-perl all 1.30-1 [103 kB] Get: 396 http://deb.debian.org/debian buster/main arm64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get: 397 http://deb.debian.org/debian buster/main arm64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get: 398 http://deb.debian.org/debian buster/main arm64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get: 399 http://deb.debian.org/debian buster/main arm64 libxml-libxml-perl arm64 2.0134+dfsg-1 [334 kB] Get: 400 http://deb.debian.org/debian buster/main arm64 texinfo arm64 6.5.0.dfsg.1-4+b1 [1427 kB] Get: 401 http://deb.debian.org/debian buster/main arm64 octave-common all 4.4.1-5 [4365 kB] Get: 402 http://deb.debian.org/debian buster/main arm64 octave arm64 4.4.1-5 [1963 kB] Get: 403 http://deb.debian.org/debian buster/main arm64 libreadline-dev arm64 7.0-5 [128 kB] Get: 404 http://deb.debian.org/debian buster/main arm64 liboctave-dev arm64 4.4.1-5 [756 kB] Get: 405 http://deb.debian.org/debian buster/main arm64 qtcore4-l10n all 4:4.8.7+dfsg-18 [662 kB] Get: 406 http://deb.debian.org/debian buster/main arm64 libqtcore4 arm64 4:4.8.7+dfsg-18 [1503 kB] Get: 407 http://deb.debian.org/debian buster/main arm64 libqt4-xml arm64 4:4.8.7+dfsg-18 [136 kB] Get: 408 http://deb.debian.org/debian buster/main arm64 libqtdbus4 arm64 4:4.8.7+dfsg-18 [209 kB] Get: 409 http://deb.debian.org/debian buster/main arm64 qtchooser arm64 66-2 [24.9 kB] Get: 410 http://deb.debian.org/debian buster/main arm64 qdbus arm64 4:4.8.7+dfsg-18 [74.2 kB] Get: 411 http://deb.debian.org/debian buster/main arm64 libqt4-dbus arm64 4:4.8.7+dfsg-18 [53.8 kB] Get: 412 http://deb.debian.org/debian buster/main arm64 libqt4-network arm64 4:4.8.7+dfsg-18 [541 kB] Get: 413 http://deb.debian.org/debian buster/main arm64 libqt4-script arm64 4:4.8.7+dfsg-18 [694 kB] Get: 414 http://deb.debian.org/debian buster/main arm64 libqt4-sql arm64 4:4.8.7+dfsg-18 [139 kB] Get: 415 http://deb.debian.org/debian buster/main arm64 libqt4-xmlpatterns arm64 4:4.8.7+dfsg-18 [969 kB] Get: 416 http://deb.debian.org/debian buster/main arm64 libqtgui4 arm64 4:4.8.7+dfsg-18 [3736 kB] Get: 417 http://deb.debian.org/debian buster/main arm64 libqt4-declarative arm64 4:4.8.7+dfsg-18 [1027 kB] Get: 418 http://deb.debian.org/debian buster/main arm64 libqt4-designer arm64 4:4.8.7+dfsg-18 [3513 kB] Get: 419 http://deb.debian.org/debian buster/main arm64 libqt4-qt3support arm64 4:4.8.7+dfsg-18 [999 kB] Get: 420 http://deb.debian.org/debian buster/main arm64 libqt4-dev-bin arm64 4:4.8.7+dfsg-18 [1584 kB] Get: 421 http://deb.debian.org/debian buster/main arm64 libqt4-help arm64 4:4.8.7+dfsg-18 [233 kB] Get: 422 http://deb.debian.org/debian buster/main arm64 libqt4-scripttools arm64 4:4.8.7+dfsg-18 [259 kB] Get: 423 http://deb.debian.org/debian buster/main arm64 libqt4-svg arm64 4:4.8.7+dfsg-18 [170 kB] Get: 424 http://deb.debian.org/debian buster/main arm64 libqt4-test arm64 4:4.8.7+dfsg-18 [104 kB] Get: 425 http://deb.debian.org/debian buster/main arm64 qt4-linguist-tools arm64 4:4.8.7+dfsg-18 [820 kB] Get: 426 http://deb.debian.org/debian buster/main arm64 qt4-qmake arm64 4:4.8.7+dfsg-18 [1160 kB] Get: 427 http://deb.debian.org/debian buster/main arm64 libqt4-dev arm64 4:4.8.7+dfsg-18 [868 kB] Get: 428 http://deb.debian.org/debian buster/main arm64 libqt4-opengl arm64 4:4.8.7+dfsg-18 [321 kB] Get: 429 http://deb.debian.org/debian buster/main arm64 libqt4-opengl-dev arm64 4:4.8.7+dfsg-18 [70.1 kB] Get: 430 http://deb.debian.org/debian buster/main arm64 matlab-support-dev all 0.0.21 [7348 B] Fetched 191 MB in 17s (11.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_arm64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:arm64. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. 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Preparing to unpack .../14-libreadline7_7.0-5_arm64.deb ... Unpacking libreadline7:arm64 (7.0-5) ... Selecting previously unselected package libpython2.7-stdlib:arm64. Preparing to unpack .../15-libpython2.7-stdlib_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-stdlib:arm64. Preparing to unpack .../17-libpython2-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython2-stdlib:arm64 (2.7.16-1) ... Selecting previously unselected package libpython-stdlib:arm64. Preparing to unpack .../18-libpython-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython-stdlib:arm64 (2.7.16-1) ... Setting up libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20631 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_arm64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20664 files and directories currently installed.) Preparing to unpack .../00-python_2.7.16-1_arm64.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package libfftw3-double3:arm64. Preparing to unpack .../01-libfftw3-double3_3.3.8-2_arm64.deb ... Unpacking libfftw3-double3:arm64 (3.3.8-2) ... Selecting previously unselected package libpng16-16:arm64. Preparing to unpack .../02-libpng16-16_1.6.36-6_arm64.deb ... Unpacking libpng16-16:arm64 (1.6.36-6) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../03-libfreetype6_2.9.1-3+deb10u1_arm64.deb ... Unpacking libfreetype6:arm64 (2.9.1-3+deb10u1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../04-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../06-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../07-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../08-libfontconfig1_2.13.1-2_arm64.deb ... Unpacking libfontconfig1:arm64 (2.13.1-2) ... Selecting previously unselected package libde265-0:arm64. Preparing to unpack .../09-libde265-0_1.0.3-1+b1_arm64.deb ... Unpacking libde265-0:arm64 (1.0.3-1+b1) ... Selecting previously unselected package libnuma1:arm64. Preparing to unpack .../10-libnuma1_2.0.12-1_arm64.deb ... Unpacking libnuma1:arm64 (2.0.12-1) ... Selecting previously unselected package libx265-165:arm64. Preparing to unpack .../11-libx265-165_2.9-4_arm64.deb ... Unpacking libx265-165:arm64 (2.9-4) ... Selecting previously unselected package libheif1:arm64. Preparing to unpack .../12-libheif1_1.3.2-2~deb10u1_arm64.deb ... Unpacking libheif1:arm64 (1.3.2-2~deb10u1) ... Selecting previously unselected package libjbig0:arm64. Preparing to unpack .../13-libjbig0_2.1-3.1+b2_arm64.deb ... Unpacking libjbig0:arm64 (2.1-3.1+b2) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../14-libjpeg62-turbo_1%3a1.5.2-2+b1_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:1.5.2-2+b1) ... Selecting previously unselected package liblcms2-2:arm64. Preparing to unpack .../15-liblcms2-2_2.9-3_arm64.deb ... Unpacking liblcms2-2:arm64 (2.9-3) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../16-libglib2.0-0_2.58.3-2+deb10u2_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... Selecting previously unselected package liblqr-1-0:arm64. Preparing to unpack .../17-liblqr-1-0_0.4.2-2.1_arm64.deb ... Unpacking liblqr-1-0:arm64 (0.4.2-2.1) ... Selecting previously unselected package libltdl7:arm64. Preparing to unpack .../18-libltdl7_2.4.6-9_arm64.deb ... Unpacking libltdl7:arm64 (2.4.6-9) ... Selecting previously unselected package libopenjp2-7:arm64. Preparing to unpack .../19-libopenjp2-7_2.3.0-2+deb10u1_arm64.deb ... Unpacking libopenjp2-7:arm64 (2.3.0-2+deb10u1) ... Selecting previously unselected package libwebp6:arm64. Preparing to unpack .../20-libwebp6_0.6.1-2_arm64.deb ... Unpacking libwebp6:arm64 (0.6.1-2) ... Selecting previously unselected package libtiff5:arm64. Preparing to unpack .../21-libtiff5_4.1.0+git191117-2~deb10u1_arm64.deb ... Unpacking libtiff5:arm64 (4.1.0+git191117-2~deb10u1) ... Selecting previously unselected package libwebpmux3:arm64. Preparing to unpack .../22-libwebpmux3_0.6.1-2_arm64.deb ... Unpacking libwebpmux3:arm64 (0.6.1-2) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../23-libxau6_1%3a1.0.8-1+b2_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../24-libxdmcp6_1%3a1.1.2-3_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../25-libxcb1_1.13.1-2_arm64.deb ... Unpacking libxcb1:arm64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../26-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../27-libx11-6_2%3a1.6.7-1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.6.7-1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../28-libxext6_2%3a1.3.3-1+b2_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.3-1+b2) ... Selecting previously unselected package libicu63:arm64. Preparing to unpack .../29-libicu63_63.1-6+deb10u1_arm64.deb ... Unpacking libicu63:arm64 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../30-libxml2_2.9.4+dfsg1-7+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package imagemagick-6-common. Preparing to unpack .../31-imagemagick-6-common_8%3a6.9.10.23+dfsg-2.1_all.deb ... Unpacking imagemagick-6-common (8:6.9.10.23+dfsg-2.1) ... Selecting previously unselected package libmagickcore-6.q16-6:arm64. Preparing to unpack .../32-libmagickcore-6.q16-6_8%3a6.9.10.23+dfsg-2.1_arm64.deb ... Unpacking libmagickcore-6.q16-6:arm64 (8:6.9.10.23+dfsg-2.1) ... Selecting previously unselected package libmagickwand-6.q16-6:arm64. Preparing to unpack .../33-libmagickwand-6.q16-6_8%3a6.9.10.23+dfsg-2.1_arm64.deb ... Unpacking libmagickwand-6.q16-6:arm64 (8:6.9.10.23+dfsg-2.1) ... Selecting previously unselected package libpython3.7-minimal:arm64. Preparing to unpack .../34-libpython3.7-minimal_3.7.3-2+deb10u1_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.3-2+deb10u1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../35-python3.7-minimal_3.7.3-2+deb10u1_arm64.deb ... Unpacking python3.7-minimal (3.7.3-2+deb10u1) ... Setting up libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Setting up libpython3.7-minimal:arm64 (3.7.3-2+deb10u1) ... Setting up libexpat1:arm64 (2.2.6-2+deb10u1) ... Setting up python3.7-minimal (3.7.3-2+deb10u1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21828 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.7.3-1_arm64.deb ... Unpacking python3-minimal (3.7.3-1) ... Selecting previously unselected package libmpdec2:arm64. Preparing to unpack .../libmpdec2_2.4.2-2_arm64.deb ... 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Setting up libsasl2-2:arm64 (2.1.27+dfsg-1+deb10u1) ... Setting up libgfortran5:arm64 (8.3.0-6) ... Setting up libmtdev1:arm64 (1.1.5-1+b1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1) ... Setting up libatk1.0-data (2.30.0-2) ... Setting up libnuma1:arm64 (2.0.12-1) ... Setting up liblqr-1-0:arm64 (0.4.2-2.1) ... Setting up sensible-utils (0.0.12) ... Setting up libxshmfence1:arm64 (1.3-1) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libasound2:arm64 (1.1.8-1) ... Setting up libopenjp2-7:arm64 (2.3.0-2+deb10u1) ... Setting up libthai-data (0.1.28-2) ... Setting up libgirepository-1.0-1:arm64 (1.58.3-2) ... Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up libgtk2.0-common (2.24.32-3) ... Setting up libatk1.0-0:arm64 (2.30.0-2) ... Setting up libkrb5-3:arm64 (1.17-3) ... Setting up libtiff5:arm64 (4.1.0+git191117-2~deb10u1) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up libde265-0:arm64 (1.0.3-1+b1) ... Setting up libsamplerate0:arm64 (0.1.9-2) ... Setting up libwebpmux3:arm64 (0.6.1-2) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libdrm-common (2.4.97-1) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up libevdev2:arm64 (1.6.0+dfsg-1) ... Setting up readline-common (7.0-5) ... Setting up libicu-dev:arm64 (63.1-6+deb10u1) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up libdouble-conversion1:arm64 (3.1.0-3) ... Setting up libsuitesparseconfig5:arm64 (1:5.4.0+dfsg-1) ... Setting up libgudev-1.0-0:arm64 (232-2) ... Setting up qtchooser (66-2) ... Setting up libsz2:arm64 (1.0.2-1) ... Setting up libvorbisenc2:arm64 (1.3.6-2) ... Setting up libreadline7:arm64 (7.0-5) ... Setting up qtcore4-l10n (4:4.8.7+dfsg-18) ... Setting up libwacom-common (0.32-1) ... Setting up libxkbcommon0:arm64 (0.8.2-1) ... Setting up matlab-support-dev (0.0.21) ... Setting up libwayland-client0:arm64 (1.16.0-1) ... Setting up libmng1:arm64 (1.0.10+dfsg-3.1+b5) ... Setting up x11proto-dev (2018.4-4) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libglibmm-2.4-1v5:arm64 (2.58.0-2) ... Setting up libblkid-dev:arm64 (2.33.1-0.1) ... Setting up libgfortran-8-dev:arm64 (8.3.0-6) ... Setting up libamd2:arm64 (1:5.4.0+dfsg-1) ... Setting up libice6:arm64 (2:1.0.9-2) ... Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libpython3.7-stdlib:arm64 (3.7.3-2+deb10u1) ... Setting up libncurses-dev:arm64 (6.1+20181013-2+deb10u2) ... Setting up libxcb1:arm64 (1.13.1-2) ... Setting up libgsl-dev (2.5+dfsg-6) ... Setting up libxcb-xfixes0:arm64 (1.13.1-2) ... Setting up libxau-dev:arm64 (1:1.0.8-1+b2) ... Setting up libcolamd2:arm64 (1:5.4.0+dfsg-1) ... Setting up libice-dev:arm64 (2:1.0.9-2) ... Setting up libtool (2.4.6-9) ... Setting up libxcb-render0:arm64 (1.13.1-2) ... Setting up libxshmfence-dev:arm64 (1.3-1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libx265-165:arm64 (2.9-4) ... Setting up libpcre3-dev:arm64 (2:8.39-12) ... Setting up x11proto-randr-dev (2018.4-4) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libfribidi-dev:arm64 (1.0.5-3.1+deb10u1) ... Setting up libxcb-glx0:arm64 (1.13.1-2) ... Setting up libedit2:arm64 (3.1-20181209-1) ... Setting up libheif1:arm64 (1.3.2-2~deb10u1) ... Setting up libpng-dev:arm64 (1.6.36-6) ... Setting up libxcb-keysyms1:arm64 (0.4.0-1+b2) ... Setting up libaec-dev:arm64 (1.0.2-1) ... Setting up libxcb-shape0:arm64 (1.13.1-2) ... Setting up libavahi-common3:arm64 (0.7-4+b1) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up bc (1.07.1-2+b1) ... Setting up libglib2.0-bin (2.58.3-2+deb10u2) ... Setting up libldap-2.4-2:arm64 (2.4.47+dfsg-3+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-render-util0:arm64 (0.3.9-1+b1) ... Setting up libxcb-shm0:arm64 (1.13.1-2) ... Setting up libxcb-icccm4:arm64 (0.4.1-1.1) ... Setting up libxcb-util0:arm64 (0.3.8-3+b2) ... Setting up libreadline-dev:arm64 (7.0-5) ... Setting up x11proto-xinerama-dev (2018.4-4) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libbtf1:arm64 (1:5.4.0+dfsg-1) ... Setting up libxcb-xkb1:arm64 (1.13.1-2) ... Setting up libxcb-image0:arm64 (0.4.0-1+b2) ... Setting up libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Setting up libxcb-present0:arm64 (1.13.1-2) ... Setting up libsigc++-2.0-dev:arm64 (2.10.1-2) ... Setting up libthai0:arm64 (0.1.28-2) ... Setting up libcamd2:arm64 (1:5.4.0+dfsg-1) ... Setting up libxdmcp-dev:arm64 (1:1.1.2-3) ... Setting up libblas3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb-xinerama0:arm64 (1.13.1-2) ... Setting up x11proto-damage-dev (1:2018.4-4) ... Setting up x11proto-composite-dev (1:2018.4-4) ... Setting up libfreetype6:arm64 (2.9.1-3+deb10u1) ... Setting up libglpk40:arm64 (4.65-2) ... Setting up libxcb-sync1:arm64 (1.13.1-2) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up shared-mime-info (1.10-1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libxkbcommon-x11-0:arm64 (0.8.2-1) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up libgssapi-krb5-2:arm64 (1.17-3) ... Setting up x11proto-input-dev (2018.4-4) ... Setting up libcroco3:arm64 (0.6.12-3) ... Setting up qt4-qmake (4:4.8.7+dfsg-18) ... Setting up libqtcore4:arm64 (4:4.8.7+dfsg-18) ... Setting up ucf (3.0038+nmu1) ... Setting up gir1.2-glib-2.0:arm64 (1.58.3-2) ... Setting up libqt5core5a:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up autoconf (2.69-11) ... Setting up libxcb-dri2-0:arm64 (1.13.1-2) ... Setting up x11proto-xf86vidmode-dev (2018.4-4) ... Setting up libjack-jackd2-0:arm64 (1.9.12~dfsg-2) ... Setting up x11proto-xext-dev (2018.4-4) ... Setting up libdrm2:arm64 (2.4.97-1) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libklu1:arm64 (1:5.4.0+dfsg-1) ... Setting up libqt5dbus5:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up libccolamd2:arm64 (1:5.4.0+dfsg-1) ... Setting up libxcb-randr0:arm64 (1.13.1-2) ... Setting up libllvm7:arm64 (1:7.0.1-8) ... Setting up libx11-6:arm64 (2:1.6.7-1) ... Setting up libharfbuzz0b:arm64 (2.3.1-1) ... Setting up libcxsparse3:arm64 (1:5.4.0+dfsg-1) ... Setting up libsndfile1:arm64 (1.0.28-6) ... Setting up libatkmm-1.6-1v5:arm64 (2.28.0-2) ... Setting up libxml2-utils (2.9.4+dfsg1-7+b3) ... Setting up x11proto-fixes-dev (1:2018.4-4) ... Setting up libwacom2:arm64 (0.32-1) ... Setting up libxcomposite1:arm64 (1:0.4.4-2) ... Setting up libsm6:arm64 (2:1.2.3-1) ... Setting up libfftw3-dev:arm64 (3.3.8-2) ... Setting up libavahi-client3:arm64 (0.7-4+b1) ... Setting up libmount-dev:arm64 (2.33.1-0.1) ... Setting up libblas-dev:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up libpython3-stdlib:arm64 (3.7.3-1) ... Setting up libdrm-amdgpu1:arm64 (2.4.97-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:arm64 (1.13.1-2) ... Setting up python3.7 (3.7.3-2+deb10u1) ... Setting up libportaudio2:arm64 (19.6.0-1) ... Setting up liblapack3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libdrm-nouveau2:arm64 (2.4.97-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libharfbuzz-icu0:arm64 (2.3.1-1) ... Setting up libdrm-etnaviv1:arm64 (2.4.97-1) ... Setting up libxcb1-dev:arm64 (1.13.1-2) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up libgbm1:arm64 (18.3.6-2+deb10u1) ... Setting up libwmf0.2-7:arm64 (0.2.8.4-14) ... Setting up libpython2-stdlib:arm64 (2.7.16-1) ... Setting up gir1.2-atk-1.0:arm64 (2.30.0-2) ... Setting up libsm-dev:arm64 (2:1.2.3-1) ... Setting up libselinux1-dev:arm64 (2.8-1+b1) ... Setting up libdrm-radeon1:arm64 (2.4.97-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libgl1-mesa-dri:arm64 (18.3.6-2+deb10u1) ... Setting up libhdf5-cpp-103:arm64 (1.10.4+repack-10) ... Setting up libarpack2:arm64 (3.7.0-2) ... Setting up libx11-dev:arm64 (2:1.6.7-1) ... Setting up libxext6:arm64 (2:1.3.3-1+b2) ... Setting up libxcb-dri3-dev:arm64 (1.13.1-2) ... Setting up libcurl3-gnutls:arm64 (7.64.0-4+deb10u1) ... Setting up python3 (3.7.3-1) ... Setting up libharfbuzz-gobject0:arm64 (2.3.1-1) ... Setting up libqrupdate1:arm64 (1.1.2-3) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gir1.2-harfbuzz-0.0:arm64 (2.3.1-1) ... Setting up python2 (2.7.16-1) ... Setting up libqt5network5:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up libfreetype6-dev:arm64 (2.9.1-3+deb10u1) ... Setting up libxxf86vm1:arm64 (1:1.1.4-1+b2) ... Setting up libinput-bin (1.12.6-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libqt4-sql:arm64 (4:4.8.7+dfsg-18) ... Setting up libqt5sql5:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libxcb-shm0-dev:arm64 (1.13.1-2) ... Setting up libpython-stdlib:arm64 (2.7.16-1) ... Setting up libqt4-xml:arm64 (4:4.8.7+dfsg-18) ... Setting up libegl-mesa0:arm64 (18.3.6-2+deb10u1) ... Setting up libxcb-dri2-0-dev:arm64 (1.13.1-2) ... Setting up libqt4-test:arm64 (4:4.8.7+dfsg-18) ... Setting up libxfixes3:arm64 (1:5.0.3-1) ... Setting up libgdk-pixbuf2.0-0:arm64 (2.38.1+dfsg-1) ... Setting up libxinerama1:arm64 (2:1.1.4-2) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up liblapack-dev:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up libxrandr2:arm64 (2:1.5.1-1) ... Setting up libdrm-freedreno1:arm64 (2.4.97-1) ... Setting up libgraphicsmagick-q16-3 (1.4~hg15978-1+deb10u1) ... Setting up libxcb-render0-dev:arm64 (1.13.1-2) ... Setting up libxcb-glx0-dev:arm64 (1.13.1-2) ... Setting up libxt6:arm64 (1:1.1.5-1+b3) ... Setting up libaudio2:arm64 (1.9.4-6) ... Setting up libdrm-tegra0:arm64 (2.4.97-1) ... Setting up libxcb-shape0-dev:arm64 (1.13.1-2) ... Setting up libxext-dev:arm64 (2:1.3.3-1+b2) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libcups2:arm64 (2.2.10-6+deb10u3) ... Setting up libgdk-pixbuf2.0-bin (2.38.1+dfsg-1) ... Setting up libegl1:arm64 (1.1.0-1) ... Setting up libxcb-sync-dev:arm64 (1.13.1-2) ... Setting up libgraphicsmagick++-q16-12 (1.4~hg15978-1+deb10u1) ... Setting up libxcb-xfixes0-dev:arm64 (1.13.1-2) ... Setting up libfontconfig1:arm64 (2.13.1-2) ... Setting up libqtdbus4:arm64 (4:4.8.7+dfsg-18) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python (2.7.16-1) ... Setting up libxrender-dev:arm64 (1:0.9.10-1) ... Setting up libcholmod3:arm64 (1:5.4.0+dfsg-1) ... Setting up python3-distutils (3.7.3-1) ... Setting up libglib2.0-dev-bin (2.58.3-2+deb10u2) ... Setting up libinput10:arm64 (1.12.6-2) ... Setting up gtk-update-icon-cache (3.24.5-1) ... Setting up libx11-xcb-dev:arm64 (2:1.6.7-1) ... Setting up fontconfig (2.13.1-2) ... Regenerating fonts cache... done. Setting up libdrm-dev:arm64 (2.4.97-1) ... Setting up libxft2:arm64 (2.3.2-2) ... Setting up libxmu-headers (2:1.1.2-2) ... Setting up libxmu6:arm64 (2:1.1.2-2+b3) ... Setting up libfontconfig1-dev:arm64 (2.13.1-2) ... Setting up libxdamage1:arm64 (1:1.1.4-3+b3) ... Setting up libxi6:arm64 (2:1.7.9-1) ... Setting up libqt4-network:arm64 (4:4.8.7+dfsg-18) ... Setting up gir1.2-gdkpixbuf-2.0:arm64 (2.38.1+dfsg-1) ... Setting up qt4-linguist-tools (4:4.8.7+dfsg-18) ... Setting up po-debconf (1.0.21) ... Setting up libxxf86vm-dev:arm64 (1:1.1.4-1+b2) ... Setting up libxcursor1:arm64 (1:1.1.15-2) ... Setting up libpango-1.0-0:arm64 (1.42.4-8~deb10u1) ... Setting up libcairo2:arm64 (1.16.0-4) ... Setting up libcairomm-1.0-1v5:arm64 (1.12.2-4) ... Setting up libxfixes-dev:arm64 (1:5.0.3-1) ... Setting up libmagickcore-6.q16-6:arm64 (8:6.9.10.23+dfsg-2.1) ... Setting up libxrandr-dev:arm64 (2:1.5.1-1) ... Setting up libumfpack5:arm64 (1:5.4.0+dfsg-1) ... Setting up libglib2.0-dev:arm64 (2.58.3-2+deb10u2) ... Setting up libxcb-randr0-dev:arm64 (1.13.1-2) ... Setting up libxt-dev:arm64 (1:1.1.5-1+b3) ... Setting up libqt4-xmlpatterns:arm64 (4:4.8.7+dfsg-18) ... Setting up libglibmm-2.4-dev:arm64 (2.58.0-2) ... Setting up libxcb-present-dev:arm64 (1.13.1-2) ... Setting up libxinerama-dev:arm64 (2:1.1.4-2) ... Setting up texinfo (6.5.0.dfsg.1-4+b1) ... Setting up qdbus (4:4.8.7+dfsg-18) ... Setting up libqt4-script:arm64 (4:4.8.7+dfsg-18) ... Setting up libmagickwand-6.q16-6:arm64 (8:6.9.10.23+dfsg-2.1) ... Setting up mesa-common-dev:arm64 (18.3.6-2+deb10u1) ... Setting up libcairo-gobject2:arm64 (1.16.0-4) ... Setting up libpangoft2-1.0-0:arm64 (1.42.4-8~deb10u1) ... Setting up libxi-dev:arm64 (2:1.7.9-1) ... Setting up libatk1.0-dev:arm64 (2.30.0-2) ... Setting up libpangocairo-1.0-0:arm64 (1.42.4-8~deb10u1) ... Setting up libxft-dev:arm64 (2.3.2-2) ... Setting up libxdamage-dev:arm64 (1:1.1.4-3+b3) ... Setting up libqtgui4:arm64 (4:4.8.7+dfsg-18) ... Setting up libcairo-script-interpreter2:arm64 (1.16.0-4) ... Setting up libharfbuzz-dev:arm64 (2.3.1-1) ... Setting up gir1.2-freedesktop:arm64 (1.58.3-2) ... Setting up libglx-mesa0:arm64 (18.3.6-2+deb10u1) ... Setting up libpangox-1.0-0:arm64 (0.0.2-5+b2) ... Setting up libpangoxft-1.0-0:arm64 (1.42.4-8~deb10u1) ... Setting up libglx0:arm64 (1.1.0-1) ... Setting up libqt4-declarative:arm64 (4:4.8.7+dfsg-18) ... Setting up libxcomposite-dev:arm64 (1:0.4.4-2) ... Setting up libxcursor-dev:arm64 (1:1.1.15-2) ... Setting up libfltk1.3:arm64 (1.3.4-9) ... Setting up libqt4-help:arm64 (4:4.8.7+dfsg-18) ... Setting up pango1.0-tools (1.42.4-8~deb10u1) ... Setting up libqt4-designer:arm64 (4:4.8.7+dfsg-18) ... Setting up libxmu-dev:arm64 (2:1.1.2-2+b3) ... Setting up libgdk-pixbuf2.0-dev:arm64 (2.38.1+dfsg-1) ... Setting up libqt4-qt3support:arm64 (4:4.8.7+dfsg-18) ... Setting up librsvg2-2:arm64 (2.44.10-2.1) ... Setting up gir1.2-pango-1.0:arm64 (1.42.4-8~deb10u1) ... Setting up libgl1:arm64 (1.1.0-1) ... Setting up libqt4-scripttools:arm64 (4:4.8.7+dfsg-18) ... Setting up libqt4-svg:arm64 (4:4.8.7+dfsg-18) ... Setting up libqt4-dbus:arm64 (4:4.8.7+dfsg-18) ... Setting up librsvg2-common:arm64 (2.44.10-2.1) ... Setting up libpangomm-1.4-1v5:arm64 (2.42.0-2) ... Setting up imagemagick-6.q16 (8:6.9.10.23+dfsg-2.1) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up libatkmm-1.6-dev:arm64 (2.28.0-2) ... Setting up libqt4-opengl:arm64 (4:4.8.7+dfsg-18) ... Setting up libcairo2-dev:arm64 (1.16.0-4) ... Setting up libglu1-mesa:arm64 (9.0.0-2.1+b3) ... Setting up libqt4-dev-bin (4:4.8.7+dfsg-18) ... Setting up libfltk-gl1.3:arm64 (1.3.4-9) ... Setting up libqt5gui5:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up libglvnd-dev:arm64 (1.1.0-1) ... Setting up libqt5widgets5:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up libqt5help5:arm64 (5.11.3-4) ... Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ... Setting up liboctave6:arm64 (4.4.1-5) ... Setting up libqt5printsupport5:arm64 (5.11.3+dfsg1-1+deb10u3) ... Setting up libcairomm-1.0-dev:arm64 (1.12.2-4) ... Setting up adwaita-icon-theme (3.30.1-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libpango1.0-dev:arm64 (1.42.4-8~deb10u1) ... Setting up imagemagick (8:6.9.10.23+dfsg-2.1) ... Setting up libqscintilla2-qt5-13 (2.10.4+dfsg-2.1) ... 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Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package mrtrix3 dpkg-buildpackage: info: source version 3.0~rc3+git135-g2b8e7d0c2-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Yaroslav Halchenko dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./build clean find . -name '*.pyc' -delete rm clean \ config configure.log build.log \ core/version.cpp lib/mrtrix3/_version.py src/exec_version.cpp rm: cannot remove 'clean': No such file or directory rm: cannot remove 'config': No such file or directory rm: cannot remove 'configure.log': No such file or directory rm: cannot remove 'core/version.cpp': No such file or directory rm: cannot remove 'lib/mrtrix3/_version.py': No such file or directory rm: cannot remove 'src/exec_version.cpp': No such file or directory make[1]: [debian/rules:69: override_dh_clean] Error 1 (ignored) dh_clean make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' debian/rules build make: 'build' is up to date. fakeroot debian/rules binary dh binary dh_update_autotools_config debian/rules override_dh_auto_configure make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./configure -openmp # -debug MRtrix build type requested: release version with openmp Detecting OS: linux Looking for compiler [clang++]: not found Looking for compiler [g++]: g++ (Debian 8.3.0-6) 8.3.0 Checking for C++11 compliance: ok Checking shared library generation: ok Detecting pointer size: 64 bit Detecting byte order: little-endian Checking for variable-length array support: ok Checking for non-POD variable-length array support: ok Checking for ::max_align_t: 16 bytes Checking for std::max_align_t: 16 bytes Checking for Eigen3 library: 3.3.7 Checking for zlib compression library: 1.2.11 Checking for "JSON for Modern C++" requirements: ok Checking for TIFF library: not found - TIFF support disabled Checking for FFTW library: fftw-3.3.8 Checking for OpenMP support: ok Checking for Qt moc: moc (version 4.8.7) Checking for Qt qmake: qmake (version 4.8.7) Checking for Qt rcc: rcc (version 4.8.7) Checking for Qt: 4.8.7 writing configuration to file './config': ok make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' debian/rules override_dh_auto_build make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./build -verbose active config is default reading configuration from "config"... getting git version in folder "."... not found getting git version in folder "."... not found version file "./core/version.cpp" is out of date - updating getting git version in folder "."... not found version file "./src/exec_version.cpp" is out of date - updating compiling TODO list... building targets: bin/warpinvert bin/warpinit bin/warpcorrect bin/warpconvert bin/warp2metric bin/voxel2mesh bin/voxel2fixel bin/vectorstats bin/tsfvalidate bin/tsfthreshold bin/tsfsmooth bin/tsfmult bin/tsfinfo bin/tsfdivide bin/transformconvert bin/transformcompose bin/transformcalc bin/tensor2metric bin/tcktransform bin/tckstats bin/tcksift2 bin/tcksift bin/tcksample bin/tckresample bin/tckmap bin/tckinfo bin/tckglobal bin/tckgen bin/tckedit bin/tckdfc bin/tckconvert bin/tck2fixel bin/tck2connectome bin/shview bin/shconv bin/shbasis bin/sh2response bin/sh2power bin/sh2peaks bin/sh2amp bin/peaks2amp bin/mtnormalise bin/mrview bin/mrtransform bin/mrthreshold bin/mrstats bin/mrresize bin/mrregister bin/mrpad bin/mrmetric bin/mrmath bin/mrinfo bin/mrhistogram bin/mrhistmatch bin/mrfilter bin/mredit bin/mrdump bin/mrdegibbs bin/mrcrop bin/mrconvert bin/mrclusterstats bin/mrcheckerboardmask bin/mrcat bin/mrcalc bin/mraverageheader bin/meshfilter bin/meshconvert bin/mesh2voxel bin/maskfilter bin/maskdump bin/labelconvert bin/label2mesh bin/label2colour bin/fod2fixel bin/fod2dec bin/fixelreorient bin/fixelcrop bin/fixelcorrespondence bin/fixelconvert bin/fixelcfestats bin/fixel2voxel bin/fixel2tsf bin/fixel2sh bin/dwinormalise bin/dwiextract bin/dwidenoise bin/dwi2tensor bin/dwi2mask bin/dwi2fod bin/dwi2adc bin/dirstat bin/dirsplit bin/dirorder bin/dirmerge bin/dirgen bin/dirflip bin/dcminfo bin/dcmedit bin/connectomestats bin/connectome2tck bin/amp2sh bin/amp2response bin/afdconnectivity bin/5ttedit bin/5ttcheck bin/5tt2vis bin/5tt2gmwmi TODO list contains 505 items launching 8 threads g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/labelconvert.cpp -o tmp/cmd/labelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/method.cpp -o tmp/src/dwi/tractography/tracking/method.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/file.cpp -o tmp/src/dwi/directions/file.o moc src/gui/opengl/lighting.h -o tmp/src/gui/opengl/lighting_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/version.cpp -o tmp/core/version.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcalc.cpp -o tmp/cmd/mrcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/projection.cpp -o tmp/src/gui/projection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdump.cpp -o tmp/cmd/mrdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/tree.cpp -o tmp/core/file/dicom/tree.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/rigid.cpp -o tmp/src/registration/transform/rigid.o moc src/gui/shview/render_window.h -o tmp/src/gui/shview/render_window_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/upsampler.cpp -o tmp/src/dwi/tractography/resampling/upsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirstat.cpp -o tmp/cmd/dirstat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/shapes/cylinder.cpp -o tmp/src/gui/shapes/cylinder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrconvert.cpp -o tmp/cmd/mrconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapper.cpp -o tmp/src/dwi/tractography/mapping/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwiextract.cpp -o tmp/cmd/dwiextract.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/set.cpp -o tmp/src/dwi/directions/set.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/dict.cpp -o tmp/core/file/dicom/dict.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/app.cpp -o tmp/core/app.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/twi_stats.cpp -o tmp/src/dwi/tractography/mapping/twi_stats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong 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-DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/matrix_list.cpp -o tmp/src/gui/mrview/tool/connectome/matrix_list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksample.cpp -o tmp/cmd/tcksample.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/tractography/tractography.cpp -o tmp/src/gui/mrview/tool/tractography/tractography.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o moc src/gui/mrview/tool/tractography/tractogram.h -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/vertex_transform.cpp -o tmp/src/surface/filter/vertex_transform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/nifti2_gz.cpp -o tmp/core/formats/nifti2_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/tfce.cpp -o tmp/src/stats/tfce.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrhistogram.cpp -o tmp/cmd/mrhistogram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include cmd/mrview.cpp -o tmp/cmd/mrview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2amp.cpp -o tmp/cmd/sh2amp.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/nifti1_utils.cpp -o tmp/core/file/nifti1_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/fixed_num_points.cpp -o tmp/src/dwi/tractography/resampling/fixed_num_points.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpconvert.cpp -o tmp/cmd/warpconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/dicom.cpp -o tmp/core/formats/dicom.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/dialog/image_properties_moc.cpp -o tmp/src/gui/dialog/image_properties_moc.o ( 1/505) [CC] tmp/cmd/labelconvert.o ( 2/505) [CC] tmp/src/dwi/tractography/tracking/method.o ( 3/505) [CC] tmp/src/dwi/directions/file.o ( 4/505) [MOC] tmp/src/gui/opengl/lighting_moc.cpp ( 6/505) [CC] tmp/core/version.o ( 5/505) [CC] tmp/cmd/mrcalc.o ( 7/505) [CC] tmp/src/gui/projection.o ( 8/505) [CC] tmp/cmd/mrdump.o ( 9/505) [CC] tmp/core/file/dicom/tree.o ( 10/505) [CC] tmp/src/registration/transform/rigid.o ( 11/505) [MOC] tmp/src/gui/shview/render_window_moc.cpp ( 12/505) [CC] tmp/src/dwi/tractography/resampling/upsampler.o ( 13/505) [CC] tmp/cmd/dirstat.o ( 14/505) [CC] tmp/src/gui/shapes/cylinder.o ( 15/505) [CC] tmp/cmd/mrconvert.o ( 16/505) [CC] tmp/src/dwi/tractography/mapping/mapper.o ( 17/505) [CC] tmp/cmd/dwiextract.o ( 18/505) [CC] tmp/src/dwi/directions/set.o ( 19/505) [CC] tmp/core/file/dicom/dict.o ( 20/505) [CC] tmp/core/app.o ( 21/505) [CC] tmp/src/dwi/tractography/mapping/twi_stats.o ( 22/505) [CC] tmp/cmd/tsfmult.o ( 23/505) [CC] tmp/cmd/warpinvert.o ( 24/505) [CC] tmp/core/formats/xds.o ( 25/505) [MOC] tmp/src/gui/mrview/tool/odf/preview_moc.cpp ( 26/505) [CC] tmp/src/connectome/lut.o ( 27/505) [MOC] tmp/src/gui/mrview/tool/screen_capture_moc.cpp ( 28/505) [CC] tmp/src/gui/mrview/tool/screen_capture_moc.o ( 29/505) [CC] tmp/cmd/shview.o ( 30/505) [CC] tmp/src/gui/mrview/mode/volume.o ( 31/505) [MOC] tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp ( 32/505) [MOC] tmp/src/gui/mrview/tool/view_moc.cpp ( 33/505) [CC] tmp/src/gui/mrview/tool/odf/item.o ( 34/505) [CC] tmp/src/gui/gui.o ( 35/505) [CC] tmp/cmd/mrcheckerboardmask.o ( 36/505) [CC] tmp/src/gui/mrview/tool/base.o ( 37/505) [CC] tmp/src/surface/freesurfer.o ( 38/505) [CC] tmp/core/phase_encoding.o ( 39/505) [MOC] tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp ( 40/505) [CC] tmp/src/surface/mesh_multi.o ( 41/505) [CC] tmp/cmd/mrthreshold.o ( 42/505) [CC] tmp/core/image_io/ram.o ( 43/505) [CC] tmp/src/gui/mrview/tool/fixel/base_fixel.o ( 44/505) [CC] tmp/cmd/tckmap.o ( 45/505) [MOC] tmp/src/gui/dialog/image_properties_moc.cpp ( 46/505) [CC] tmp/src/registration/transform/initialiser.o ( 47/505) [CC] tmp/core/math/SH.o ( 48/505) [CC] tmp/src/gui/mrview/adjust_button.o ( 49/505) [CC] tmp/src/gui/mrview/tool/connectome/node.o ( 50/505) [CC] tmp/src/gui/color_button.o ( 51/505) [CC] tmp/cmd/5ttedit.o ( 52/505) [CC] tmp/src/dwi/tractography/roi.o ( 53/505) [CC] tmp/cmd/dirgen.o ( 54/505) [CC] tmp/src/gui/mrview/tool/connectome/matrix_list.o ( 55/505) [CC] tmp/cmd/tcksample.o ( 56/505) [CC] tmp/src/gui/mrview/tool/tractography/tractography.o ( 57/505) [CC] tmp/cmd/mrclusterstats.o ( 58/505) [MOC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp ( 59/505) [CC] tmp/src/dwi/fmls.o ( 60/505) [CC] tmp/src/surface/filter/vertex_transform.o ( 61/505) [CC] tmp/core/formats/nifti2_gz.o ( 62/505) [CC] tmp/src/stats/tfce.o ( 63/505) [CC] tmp/cmd/mrhistogram.o ( 64/505) [CC] tmp/cmd/mrview.o ( 65/505) [CC] tmp/cmd/sh2amp.o ( 66/505) [CC] tmp/core/file/nifti1_utils.o ( 67/505) [CC] tmp/src/dwi/tractography/resampling/fixed_num_points.o ( 68/505) [CC] tmp/cmd/warpconvert.o ( 69/505) [CC] tmp/core/formats/dicom.o ( 70/505) [CC] tmp/src/gui/dialog/image_properties_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/nifti1_utils.cpp -o tmp/core/file/nifti1_utils.o: core/file/nifti1_utils.cpp: In function 'void MR::File::NIfTI1::write(nifti_1_header&, const MR::Header&, bool)': core/file/nifti1_utils.cpp:301:17: warning: 'char* strncpy(char*, const char*, size_t)' specified bound 18 equals destination size [-Wstringop-truncation] strncpy ( (char*) &NH.db_name, comments.size() ? comments[0].c_str() : "untitled\0\0\0\0\0\0\0\0\0\0\0", 18); ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/maskdump.cpp -o tmp/cmd/maskdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/meshfilter.cpp -o tmp/cmd/meshfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/dialog/report_exception.cpp -o tmp/src/gui/dialog/report_exception.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/editing.cpp -o tmp/src/dwi/tractography/editing/editing.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5ttcheck.cpp -o tmp/cmd/5ttcheck.o rcc icons/shview.qrc -o tmp/src/gui/shview/icons.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/particlegrid.cpp -o tmp/src/dwi/tractography/GT/particlegrid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/dialog/dialog.cpp -o tmp/src/gui/dialog/dialog.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/endpoints.cpp -o tmp/src/dwi/tractography/resampling/endpoints.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdegibbs.cpp -o tmp/cmd/mrdegibbs.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/smooth.cpp -o tmp/src/surface/filter/smooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/rng.cpp -o tmp/src/dwi/tractography/rng.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/displayable.cpp -o tmp/src/gui/mrview/displayable.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 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tmp/core/file/dicom/select_cmdline.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift.cpp -o tmp/cmd/tcksift.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/shview/render_window.cpp -o tmp/src/gui/shview/render_window.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mesh2voxel.cpp -o tmp/cmd/mesh2voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o ~~~~~~~~~~ ( 71/505) [CC] tmp/cmd/maskdump.o ( 72/505) [CC] tmp/cmd/meshfilter.o ( 73/505) [CC] 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tmp/core/file/dicom/element.o (115/505) [CC] tmp/src/dwi/tractography/editing/worker.o (116/505) [CC] tmp/cmd/tsfthreshold.o (117/505) [CC] tmp/src/gui/mrview/combo_box_error.o (118/505) [CC] tmp/cmd/meshconvert.o (119/505) [CC] tmp/src/registration/nonlinear.o (120/505) [CC] tmp/src/gui/mrview/tool/fixel/legacy.o (121/505) [CC] tmp/cmd/amp2response.o (122/505) [CC] tmp/core/file/name_parser.o (123/505) [CC] tmp/cmd/tck2connectome.o (124/505) [CC] tmp/src/dwi/tractography/tracking/write_kernel.o (125/505) [CC] tmp/src/dwi/tractography/seeding/list.o (126/505) [CC] tmp/cmd/maskfilter.o (127/505) [CC] tmp/core/stats.o (128/505) [CC] tmp/src/gui/mrview/gui_image.o (129/505) [CC] tmp/src/dwi/tractography/mapping/mapping.o (130/505) [CC] tmp/src/gui/mrview/window.o (131/505) [CC] tmp/cmd/mrresize.o (132/505) [CC] tmp/cmd/tsfvalidate.o (133/505) [CC] tmp/src/gui/mrview/volume.o (134/505) [CC] tmp/src/gui/mrview/tool/connectome/shaders.o (135/505) [CC] tmp/src/gui/cursor.o (136/505) [CC] tmp/src/gui/mrview/tool/connectome/file_data_vector.o (137/505) [CC] tmp/src/dwi/tractography/tracking/tractography.o (138/505) [CC] tmp/src/dwi/tractography/SIFT/sifter.o (139/505) [CC] tmp/src/gui/mrview/mode/slice.o (140/505) [CC] tmp/core/file/dicom/patient.o (141/505) [CC] tmp/src/gui/mrview/tool/connectome/connectome.o (142/505) [CC] tmp/core/formats/mrtrix.o (143/505) [CC] tmp/cmd/tckdfc.o (144/505) [CC] tmp/cmd/5tt2gmwmi.o (145/505) [CC] tmp/cmd/warpinit.o (146/505) [CC] tmp/src/gui/dialog/image_properties.o (147/505) [MOC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp (148/505) [CC] tmp/cmd/tckresample.o (149/505) [CC] tmp/src/dwi/tractography/GT/externalenergy.o (150/505) [CC] tmp/src/surface/algo/mesh2image.o (151/505) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file.o (152/505) [CC] tmp/core/file/dicom/select_cmdline.o (153/505) [CC] tmp/cmd/tcksift.o (154/505) [CC] tmp/src/gui/shview/render_window.o (155/505) [CC] tmp/cmd/mesh2voxel.o (156/505) [CC] tmp/src/connectome/enhance.o (g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/scalar.cpp -o tmp/src/surface/scalar.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem 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-DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2response.cpp -o tmp/cmd/sh2response.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5tt2vis.cpp -o tmp/cmd/5tt2vis.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/node_list.cpp -o tmp/src/gui/mrview/tool/connectome/node_list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelconvert.cpp -o tmp/cmd/fixelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. 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with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfdivide.cpp -o tmp/cmd/tsfdivide.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/signal_handler.cpp -o tmp/core/signal_handler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/overlay.cpp -o tmp/src/gui/mrview/tool/overlay.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/shells.cpp -o tmp/src/dwi/shells.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat 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-DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/lighting_dock_moc.cpp -o tmp/src/gui/lighting_dock_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/json_utils.cpp -o tmp/core/file/json_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/mmap.cpp -o tmp/core/file/mmap.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckconvert.cpp -o tmp/cmd/tckconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/linear.cpp -o tmp/src/registration/linear.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcalc.cpp -o tmp/cmd/transformcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcrop.cpp -o tmp/cmd/fixelcrop.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/mhsampler.cpp -o tmp/src/dwi/tractography/GT/mhsampler.o moc src/gui/mrview/tool/overlay.h -o tmp/src/gui/mrview/tool/overlay_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/overlay_moc.cpp -o tmp/src/gui/mrview/tool/overlay_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/opengl/gl.cpp -o tmp/src/gui/opengl/gl.o rcc icons/mrview.qrc -o tmp/src/gui/mrview/icons.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/mrtrix.cpp -o tmp/core/mrtrix.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with 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/usr/include/eigen3 src/dwi/tractography/properties.cpp -o tmp/src/dwi/tractography/properties.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/streamline_stats.cpp -o tmp/src/dwi/tractography/SIFT2/streamline_stats.o moc src/gui/mrview/tool/tractography/track_scalar_file.h -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem 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-pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcompose.cpp -o tmp/cmd/transformcompose.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/voxel2fixel.cpp -o tmp/cmd/voxel2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem 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-ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/colourmap_observers.cpp -o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/icons.cpp -o tmp/src/gui/mrview/icons.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2voxel.cpp -o tmp/cmd/fixel2voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp -o tmp/src/gui/mrview/tool/connectome/node_list_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckedit.cpp -o tmp/cmd/tckedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/sparse.cpp -o tmp/core/image_io/sparse.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/key_value.cpp -o tmp/core/file/key_value.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tck2fixel.cpp -o tmp/cmd/tck2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o moc src/gui/mrview/tool/connectome/selection.h -o tmp/src/gui/mrview/tool/connectome/selection_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/stride.cpp -o tmp/core/stride.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/nifti1_gz.cpp -o tmp/core/formats/nifti1_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/colourmap.cpp -o tmp/src/gui/mrview/colourmap.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/mgh.cpp -o tmp/core/file/mgh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/lighting_dock.cpp -o tmp/src/gui/lighting_dock.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/tck2nodes.cpp -o tmp/src/dwi/tractography/connectome/tck2nodes.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2fod.cpp -o tmp/cmd/dwi2fod.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfinfo.cpp -o tmp/cmd/tsfinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/arc.cpp -o tmp/src/dwi/tractography/resampling/arc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/selection.cpp -o tmp/src/gui/mrview/tool/connectome/selection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirmerge.cpp -o tmp/cmd/dirmerge.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/ram.cpp -o tmp/core/formats/ram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/thread.cpp -o tmp/core/thread.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/nifti_utils.cpp -o tmp/core/file/nifti_utils.o X_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/mesh.cpp -o tmp/src/surface/mesh.o: src/surface/mesh.cpp: In member function 'void MR::Surface::Mesh::save_stl(const string&, bool) const': src/surface/mesh.cpp:660:17: warning: 'char* strncpy(char*, const char*, size_t)' specified bound 80 equals destination size [-Wstringop-truncation] strncpy (header, string.c_str(), 80); ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ (242/505) [CC] tmp/src/exec_version.o (243/505) [MOC] tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp (244/505) [CC] tmp/src/gui/mrview/tool/fixel/fixel_moc.o (245/505) [CC] tmp/src/gui/dialog/list.o (246/505) [CC] tmp/src/gui/mrview/tool/roi_editor/item.o (247/505) [MOC] tmp/src/gui/dwi/render_frame_moc.cpp (248/505) [CC] tmp/src/gui/dwi/render_frame_moc.o (249/505) [CC] tmp/cmd/warpcorrect.o (250/505) [CC] tmp/core/image_io/scratch.o (251/505) [CC] tmp/cmd/dcmedit.o (252/505) [CC] tmp/core/file/dicom/mapper.o (253/505) [CC] tmp/core/formats/mgh.o (254/505) [CC] tmp/src/gui/mrview/mode/ortho_moc.o (255/505) [CC] tmp/cmd/fixelreorient.o (256/505) [MOC] tmp/src/gui/mrview/colourmap_button_moc.cpp (257/505) [CC] tmp/src/dwi/directions/mask.o (258/505) [CC] tmp/cmd/tckgen.o (259/505) [CC] tmp/src/dwi/tractography/resampling/downsampler.o (260/505) [CC] tmp/core/axes.o (261/505) [CC] tmp/core/file/tiff.o (262/505) [CC] tmp/core/datatype.o (263/505) [CC] tmp/core/header.o (264/505) [CC] tmp/src/dwi/tractography/algorithms/iFOD2.o (265/505) [CC] tmp/src/gui/shapes/halfsphere.o (266/505) [CC] tmp/cmd/label2colour.o (267/505) [MOC] tmp/src/gui/mrview/displayable_moc.cpp (268/505) [CC] tmp/src/gui/mrview/displayable_moc.o (269/505) [CC] tmp/cmd/mrtransform.o (270/505) [CC] tmp/src/gui/mrview/mode/lightbox_moc.o (271/505) [CC] tmp/src/gui/mrview/combo_box_error_moc.o (272/505) [CC] tmp/src/gui/mrview/colourmap_button_moc.o (273/505) [CC] tmp/core/math/stats/permutation.o (274/505) [CC] tmp/cmd/fixel2tsf.o (275/505) [CC] tmp/src/dwi/tractography/SIFT/proc_mask.o (276/505) [CC] tmp/core/image_io/fetch_store.o (277/505) [CC] tmp/src/dwi/tractography/SIFT/track_contribution.o (278/505) [CC] tmp/src/gui/mrview/tool/odf/preview_moc.o (279/505) [CC] tmp/src/dwi/tractography/SIFT/track_index_range.o (280/505) [CC] tmp/src/dwi/tractography/properties.o (281/505) [CC] tmp/src/dwi/tractography/SIFT2/streamline_stats.o (282/505) [MOC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp (283/505) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o (284/505) [CC] tmp/src/gui/dwi/render_frame.o (285/505) [CC] tmp/core/formats/analyse.o (286/505) [CC] tmp/core/algo/histogram.o (287/505) [CC] tmp/cmd/transformcompose.o (288/505) [CC] tmp/cmd/voxel2fixel.o (289/505) [CC] tmp/cmd/fixelcorrespondence.o (290/505) [CC] tmp/core/formats/tiff.o (291/505) [CC] tmp/src/dwi/tractography/SIFT2/reg_calculator.o (292/505) [CC] tmp/src/gui/mrview/tool/connectome/colourmap_observers.o (293/505) [CC] tmp/src/gui/mrview/icons.o (294/505) [CC] tmp/cmd/fixel2voxel.o (295/505) [CC] tmp/src/gui/mrview/tool/connectome/node_list_moc.o (296/505) [CC] tmp/cmd/tckedit.o (297/505) [CC] tmp/core/image_io/sparse.o (298/505) [CC] tmp/core/file/key_value.o (299/505) [CC] tmp/src/dwi/tractography/seeding/seeding.o (300/505) [CC] tmp/cmd/tck2fixel.o (301/505) [CC] tmp/src/dwi/tractography/seeding/dynamic.o (302/505) [MOC] tmp/src/gui/mrview/tool/connectome/selection_moc.cpp (303/505) [CC] tmp/core/stride.o (304/505) [CC] tmp/core/formats/nifti1_gz.o (305/505) [CC] tmp/src/gui/mrview/colourmap.o (306/505) [CC] tmp/core/file/mgh.o (307/505) [CC] tmp/src/gui/lighting_dock.o (308/505) [CC] tmp/src/dwi/tractography/connectome/tck2nodes.o (309/505) [CC] tmp/cmd/dwi2fod.o (310/505) [CC] tmp/cmd/tsfinfo.o (311/505) [CC] tmp/src/dwi/tractography/resampling/arc.o (312/505) [CC] tmp/src/gui/mrview/tool/connectome/selection.o (313/505) [CC] tmp/cmd/dirmerge.o (314/505) [CC] tmp/core/formats/ram.o (315/505) [CC] tmp/core/thread.o (316/505) [CC] tmp/core/file/nifti_utils.o (317g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/tractography/tractogram.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/dialog/file.cpp -o tmp/src/gui/dialog/file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tensor2metric.cpp -o tmp/cmd/tensor2metric.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/voxel2mesh.cpp -o tmp/cmd/voxel2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/directory.cpp -o tmp/src/gui/mrview/tool/fixel/directory.o moc src/gui/gui.h -o tmp/src/gui/gui_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/gui_moc.cpp -o tmp/src/gui/gui_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warp2metric.cpp -o tmp/cmd/warp2metric.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/pipe.cpp -o tmp/core/formats/pipe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/base.cpp -o tmp/src/surface/filter/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mrtrix_utils.cpp -o tmp/core/formats/mrtrix_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformconvert.cpp -o tmp/cmd/transformconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrpad.cpp -o tmp/cmd/mrpad.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fod2dec.cpp -o tmp/cmd/fod2dec.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cfe.cpp -o tmp/src/stats/cfe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrinfo.cpp -o tmp/cmd/mrinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/mode/ortho.cpp -o tmp/src/gui/mrview/mode/ortho.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcat.cpp -o tmp/cmd/mrcat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/odf/odf_moc.cpp -o tmp/src/gui/mrview/tool/odf/odf_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/label2mesh.cpp -o tmp/cmd/label2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/study.cpp -o tmp/core/file/dicom/study.o moc src/gui/color_button.h -o tmp/src/gui/color_button_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mraverageheader.cpp -o tmp/cmd/mraverageheader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/connectome.cpp -o tmp/src/dwi/tractography/connectome/connectome.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core 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-DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwidenoise.cpp -o tmp/cmd/dwidenoise.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/view.cpp -o tmp/src/gui/mrview/tool/view.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirorder.cpp -o tmp/cmd/dirorder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/mode/base.cpp -o tmp/src/gui/mrview/mode/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/resampling.cpp -o tmp/src/dwi/tractography/resampling/resampling.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/base.cpp -o tmp/core/image_io/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fod2fixel.cpp -o tmp/cmd/fod2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/amp2sh.cpp -o tmp/cmd/amp2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mredit.cpp -o tmp/cmd/mredit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cluster.cpp -o tmp/src/stats/cluster.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/view_moc.cpp -o tmp/src/gui/mrview/tool/view_moc.o moc src/gui/mrview/adjust_button.h -o tmp/src/gui/mrview/adjust_button_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/adjust_button_moc.cpp -o tmp/src/gui/mrview/adjust_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/vectorstats.cpp -o tmp/cmd/vectorstats.o moc src/gui/mrview/spin_box.h -o tmp/src/gui/mrview/spin_box_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/spin_box_moc.cpp -o tmp/src/gui/mrview/spin_box_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectome2tck.cpp -o tmp/cmd/connectome2tck.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/peaks2amp.cpp -o tmp/cmd/peaks2amp.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/gz.cpp -o tmp/core/image_io/gz.o /505) [CC] tmp/src/gui/mrview/tool/tractography/tractogram.o (318/505) [CC] tmp/src/gui/dialog/file.o (319/505) [CC] tmp/cmd/tensor2metric.o (320/505) [CC] tmp/cmd/voxel2mesh.o (321/505) [CC] tmp/src/gui/mrview/tool/fixel/directory.o (322/505) [MOC] tmp/src/gui/gui_moc.cpp (323/505) [CC] tmp/src/gui/gui_moc.o (324/505) [CC] tmp/cmd/warp2metric.o (325/505) [CC] tmp/core/formats/pipe.o (326/505) [CC] tmp/src/dwi/tractography/SIFT2/fixel_updater.o (327/505) [CC] tmp/src/surface/filter/base.o (328/505) [CC] tmp/cmd/sh2peaks.o (329/505) [CC] tmp/cmd/afdconnectivity.o (330/505) [CC] tmp/core/formats/mrtrix_utils.o (331/505) [CC] tmp/cmd/transformconvert.o (332/505) [CC] tmp/cmd/mrpad.o (333/505) [CC] tmp/cmd/fod2dec.o (334/505) [CC] tmp/src/stats/cfe.o (335/505) [CC] tmp/cmd/mrinfo.o (336/505) [CC] tmp/src/gui/mrview/mode/ortho.o (337/505) [CC] tmp/cmd/mrcat.o (338/505) [CC] tmp/src/gui/mrview/tool/odf/odf_moc.o (339/505) [CC] tmp/cmd/label2mesh.o (340/505) [CC] tmp/src/dwi/tractography/GT/internalenergy.o (341/505) [CC] tmp/core/file/dicom/study.o (342/505) [MOC] tmp/src/gui/color_button_moc.cpp (343/505) [CC] tmp/cmd/mraverageheader.o (344/505) [CC] tmp/src/dwi/tractography/connectome/connectome.o (345/505) [CC] tmp/cmd/fixel2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o: src/dwi/tractography/GT/internalenergy.cpp: In member function 'MR::DWI::Tractography::GT::ParticleEnd MR::DWI::Tractography::GT::InternalEnergyComputer::pickNeighbour()': src/dwi/tractography/GT/internalenergy.cpp:103:18: warning: 'pe' may be used uninitialized in this function [-Wmaybe-uninitialized] return pe; ^~ (346/505) [CC] tmp/src/gui/mrview/tool/connectome/selection_moc.o (347/505) [CC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.o (348/505) [CC] tmp/core/formats/nifti2.o (349/505) [CC] tmp/src/gui/opengl/font.o (350/505) [CC] tmp/cmd/dwinormalise.o (351/505) [CC] tmp/src/surface/polygon.o (352/505) [CC] tmp/cmd/shbasis.o (353/505) [CC] tmp/cmd/dwi2mask.o (354/505) [CC] tmp/src/gui/mrview/tool/roi_editor/model.o (355/505) [CC] tmp/core/math/bessel.o (356/505) [CC] tmp/src/gui/mrview/tool/connectome/edge.o (357/505) [CC] tmp/src/gui/mrview/tool/odf/preview.o (358/505) [CC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.o (359/505) [CC] tmp/src/dwi/sdeconv/csd.o (360/505) [CC] tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o (361/505) [CC] tmp/src/connectome/connectome.o (362/505) [CC] tmp/src/gui/dialog/opengl.o (363/505) [CC] tmp/core/formats/mrtrix_gz.o (364/505) [CC] tmp/core/image_io/default.o (365/505) [CC] tmp/src/dwi/tractography/mapping/voxel.o (366/505) [CC] tmp/cmd/dwi2tensor.o (367/505) [CC] tmp/cmd/fixelcfestats.o (368/505) [CC] tmp/core/file/dicom/image.o (369/505) [CC] tmp/src/gui/mrview/tool/connectome/connectome_moc.o (370/505) [CC] tmp/src/gui/mrview/mode/lightbox.o (371/505) [CC] tmp/src/registration/transform/affine.o (372/505) [CC] tmp/cmd/dwidenoise.o (373/505) [CC] tmp/src/gui/mrview/tool/view.o (374/505) [CC] tmp/cmd/dirorder.o (375/505) [CC] tmp/src/gui/mrview/mode/base.o (376/505) [CC] tmp/src/dwi/tractography/resampling/resampling.o (377/505) [CC] tmp/core/image_io/base.o (378/505) [CC] tmp/cmd/fod2fixel.o (379/505) [CC] tmp/cmd/amp2sh.o (380/505) [CC] tmp/cmd/mredit.o (381/505) [CC] tmp/src/stats/cluster.o (382/505) [CC] tmp/src/gui/mrview/tool/view_moc.o (383/505) [MOC] tmp/src/gui/mrview/adjust_button_moc.cpp (384/505) [CC] tmp/src/gui/mrview/adjust_button_moc.o (385/505) [CC] tmp/cmd/vectorstats.o (386/505) [MOC] tmp/src/gui/mrview/spin_box_moc.cpp (387/505) [CC] tmp/src/gui/mrview/spin_box_moc.o (388/505) [CC] tmp/cmd/connectome2tck.o (389/505) [CC] tmp/cmd/peaks2amp.o (390/505) [CC] tmp/core/image_io/gz.o (391/505)g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/progressbar.cpp -o tmp/core/progressbar.o moc src/gui/mrview/window.h -o tmp/src/gui/mrview/window_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/window_moc.cpp -o tmp/src/gui/mrview/window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/quick_scan.cpp -o tmp/core/file/dicom/quick_scan.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/image4D.cpp -o tmp/src/gui/mrview/tool/fixel/image4D.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/opengl/gl_core_3_3.cpp -o tmp/src/gui/opengl/gl_core_3_3.o g++ tmp/core/exception.o tmp/core/formats/mgz.o tmp/core/file/json_utils.o tmp/core/stride.o tmp/core/file/dicom/dict.o tmp/core/file/mmap.o tmp/core/formats/mrtrix.o tmp/core/formats/pipe.o tmp/core/formats/nifti1.o tmp/core/image_io/scratch.o tmp/core/math/stats/permutation.o tmp/core/formats/mri.o tmp/core/image_io/fetch_store.o tmp/core/image_io/pipe.o tmp/core/formats/nifti1_gz.o tmp/core/formats/mgh.o tmp/core/image_io/base.o tmp/core/math/average_space.o tmp/core/version.o tmp/core/math/stats/glm.o tmp/core/file/mgh.o tmp/core/file/dicom/element.o tmp/core/formats/mrtrix_utils.o tmp/core/formats/analyse.o tmp/core/file/dicom/mapper.o tmp/core/formats/mrtrix_gz.o tmp/core/file/dicom/tree.o tmp/core/file/nifti2_utils.o tmp/core/algo/histogram.o tmp/core/formats/nifti2_gz.o tmp/core/axes.o tmp/core/signal_handler.o tmp/core/formats/ram.o tmp/core/adapter/reslice.o tmp/core/math/bessel.o tmp/core/file/tiff.o tmp/core/file/nifti1_utils.o tmp/core/datatype.o tmp/core/header.o tmp/core/image_io/ram.o tmp/core/image_io/mosaic.o tmp/core/file/dicom/select_cmdline.o tmp/core/formats/list.o tmp/core/image_io/sparse.o tmp/core/phase_encoding.o tmp/core/mrtrix.o tmp/core/file/name_parser.o tmp/core/image_io/tiff.o tmp/core/file/dicom/study.o tmp/core/file/key_value.o tmp/core/formats/nifti2.o tmp/core/app.o tmp/core/file/config.o tmp/core/thread.o tmp/core/formats/dicom.o tmp/core/image_io/gz.o tmp/core/progressbar.o tmp/core/file/nifti_utils.o tmp/core/bitset.o tmp/core/stats.o tmp/core/file/dicom/patient.o tmp/core/math/SH.o tmp/core/file/dicom/quick_scan.o tmp/core/formats/xds.o tmp/core/image_io/default.o tmp/core/file/ofstream.o tmp/core/formats/tiff.o tmp/core/formats/mrtrix_sparse_legacy.o tmp/core/file/dicom/series.o tmp/core/file/dicom/image.o -shared -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -o lib/libmrtrix.so g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -ffile-prefix-map=/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++ -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/color_button_moc.cpp -o tmp/src/gui/color_button_moc.o g++ tmp/src/exec_version.o tmp/cmd/transformcompose.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcompose g++ tmp/src/dwi/directions/file.o tmp/cmd/dirorder.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirorder g++ tmp/cmd/dirgen.o tmp/src/dwi/directions/file.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirgen g++ tmp/cmd/peaks2amp.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/peaks2amp g++ tmp/src/connectome/lut.o tmp/cmd/meshconvert.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/base.o tmp/src/surface/filter/vertex_transform.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/connectome/connectome.o tmp/src/surface/mesh_multi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshconvert g++ tmp/cmd/mrpad.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrpad g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/cmd/tck2fixel.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2fixel g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/cmd/afdconnectivity.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/afdconnectivity g++ tmp/cmd/mrstats.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrstats g++ tmp/cmd/warpconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpconvert g++ tmp/cmd/sh2power.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2power g++ tmp/src/exec_version.o tmp/cmd/mrhistmatch.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistmatch g++ tmp/cmd/mrthreshold.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrthreshold g++ tmp/src/dwi/directions/predefined.o tmp/cmd/fod2dec.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2dec g++ tmp/cmd/mrdump.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdump g++ tmp/cmd/shbasis.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shbasis g++ tmp/cmd/warp2metric.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warp2metric g++ tmp/src/exec_version.o tmp/cmd/fixel2sh.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2sh g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfthreshold.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfthreshold g++ tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/cmd/labelconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/labelconvert g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/mrmath.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmath g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/dwi2adc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2adc g++ tmp/cmd/mrcat.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcat g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tckconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckconvert g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/fixel2voxel.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2voxel g++ tmp/cmd/transformcalc.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcalc g++ tmp/cmd/maskfilter.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskfilter g++ tmp/cmd/warpinvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinvert g++ tmp/cmd/mrcalc.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcalc g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/base.o tmp/src/surface/filter/smooth.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/cmd/meshfilter.o tmp/src/surface/mesh_multi.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshfilter g++ tmp/src/dwi/tractography/roi.o tmp/cmd/5tt2vis.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2vis g++ tmp/cmd/mrfilter.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrfilter g++ tmp/cmd/maskdump.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskdump g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/cmd/fixel2tsf.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2tsf g++ tmp/src/dwi/directions/file.o tmp/cmd/dirmerge.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirmerge g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfdivide.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfdivide g++ tmp/src/stats/permtest.o tmp/cmd/vectorstats.o tmp/src/stats/permstack.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/vectorstats g++ tmp/src/exec_version.o tmp/cmd/warpinit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinit g++ tmp/src/exec_version.o tmp/cmd/voxel2fixel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2fixel g++ tmp/cmd/mredit.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mredit g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tsfsmooth.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfsmooth g++ tmp/src/dwi/directions/predefined.o tmp/cmd/fod2fixel.o tmp/src/exec_version.o tmp/src/dwi/directions/mask.o tmp/src/dwi/directions/set.o tmp/src/dwi/fmls.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2fixel g++ tmp/src/dwi/gradient.o tmp/cmd/mrconvert.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrconvert g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/cmd/tckdfc.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckdfc g++ tmp/src/dwi/directions/file.o tmp/src/exec_version.o tmp/cmd/dirflip.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirflip g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/weights.o tmp/cmd/tckstats.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckstats g++ tmp/src/gui/opengl/shader.o tmp/src/gui/dialog/report_exception.o tmp/src/gui/dwi/renderer.o tmp/src/gui/dialog/list.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/shapes/halfsphere.o tmp/src/gui/shview/render_window.o tmp/src/gui/shview/icons.o tmp/src/dwi/directions/set.o tmp/src/gui/opengl/lighting.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/dialog/dicom.o tmp/src/gui/color_button.o tmp/src/gui/dialog/dialog.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/opengl/gl.o tmp/src/gui/gui_moc.o tmp/src/dwi/directions/predefined.o tmp/src/gui/dialog/progress.o tmp/src/gui/projection.o tmp/cmd/shview.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/opengl/font.o tmp/src/gui/gui.o tmp/src/gui/lighting_dock.o tmp/src/exec_version.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/dialog/file.o tmp/src/gui/color_button_moc.o tmp/src/gui/shview/render_window_moc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -Wl,-O1 -L/usr/lib/aarch64-linux-gnu -L/usr/X11R6/lib -lQtSvg -lQtOpenGL -lQtGui -lQtCore -lGL -lpthread -o bin/shview g++ tmp/src/dwi/directions/file.o tmp/cmd/dirsplit.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirsplit g++ tmp/cmd/mrtransform.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrtransform g++ tmp/cmd/fixelcorrespondence.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcorrespondence g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/5ttedit.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttedit g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/cmd/label2mesh.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/connectome/connectome.o tmp/src/surface/mesh_multi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2mesh g++ tmp/src/exec_version.o tmp/cmd/dcmedit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcmedit g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/seeding/dynamic.o tmp/src/dwi/shells.o tmp/src/dwi/tractography/ACT/gmwmi.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/tracking/method.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/tracking/shared.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/gmwmi.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/gradient.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/tracking/tractography.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/cmd/tckgen.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/tracking/early_exit.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/algorithms/iFOD2.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/seeding/seeding.o tmp/src/dwi/tractography/seeding/basic.o tmp/src/dwi/tractography/tracking/write_kernel.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckgen g++ tmp/cmd/warpcorrect.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpcorrect g++ tmp/src/exec_version.o tmp/cmd/mrdegibbs.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdegibbs g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/cmd/tsfvalidate.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfvalidate g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/amp2response.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2response g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/cmd/voxel2mesh.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2mesh g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tckinfo.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckinfo g++ tmp/cmd/fixelconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelconvert g++ tmp/cmd/label2colour.o tmp/src/connectome/lut.o tmp/src/connectome/connectome.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2colour g++ tmp/cmd/mtnormalise.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mtnormalise g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/dwiextract.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwiextract g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/SIFT/gradient_sort.o tmp/src/dwi/tractography/mapping/mapper.o tmp/cmd/tcksift.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/SIFT/track_index_range.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/SIFT/sifter.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/stats/cfe.o tmp/src/stats/permtest.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/cmd/fixelcfestats.o tmp/src/stats/permstack.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcfestats g++ tmp/src/dwi/gradient.o tmp/cmd/sh2response.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2response g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/shells.o tmp/src/dwi/tractography/GT/gt.o tmp/src/dwi/tractography/GT/particle.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tckglobal.o tmp/src/dwi/gradient.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/GT/mhsampler.o tmp/src/dwi/tractography/GT/externalenergy.o tmp/src/exec_version.o tmp/src/dwi/tractography/GT/internalenergy.o tmp/src/dwi/tractography/GT/particlegrid.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckglobal g++ tmp/cmd/fixelcrop.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcrop g++ tmp/cmd/transformconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformconvert g++ tmp/cmd/mrhistogram.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistogram g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tsfmult.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfmult g++ tmp/cmd/dwinormalise.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwinormalise g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/5ttcheck.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttcheck g++ tmp/cmd/mrresize.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrresize g++ tmp/cmd/dirstat.o tmp/src/dwi/directions/file.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/src/dwi/gradient.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirstat g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/arc.o tmp/cmd/tckresample.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckresample g++ tmp/cmd/mrcrop.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcrop g++ tmp/src/registration/transform/initialiser_helpers.o tmp/src/exec_version.o tmp/src/registration/transform/initialiser.o tmp/cmd/mraverageheader.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mraverageheader g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/cmd/mrinfo.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrinfo g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/cmd/mesh2voxel.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/vertex_transform.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/surface/filter/base.o tmp/src/connectome/connectome.o tmp/src/surface/mesh_multi.o tmp/src/surface/algo/mesh2image.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mesh2voxel g++ tmp/cmd/dwi2tensor.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2tensor g++ tmp/cmd/dwidenoise.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwidenoise g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/SIFT2/fixel_updater.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/SIFT2/streamline_stats.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/SIFT2/line_search.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/SIFT2/tckfactor.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/SIFT2/reg_calculator.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/cmd/tcksift2.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/SIFT/track_index_range.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift2 g++ tmp/src/dwi/tractography/roi.o tmp/src/gui/dialog/progress.o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o tmp/src/gui/dialog/list.o tmp/src/gui/mrview/tool/view.o tmp/src/dwi/tractography/properties.o tmp/src/surface/mesh_multi.o tmp/src/gui/mrview/tool/connectome/matrix_list.o tmp/src/gui/mrview/mode/lightbox_moc.o tmp/src/gui/mrview/tool/tractography/tractography.o tmp/src/gui/projection.o tmp/src/gui/mrview/tool/roi_editor/undoentry.o tmp/src/gui/mrview/tool/connectome/node_overlay.o tmp/src/gui/shapes/sphere.o tmp/src/gui/mrview/tool/connectome/selection_moc.o tmp/src/gui/shapes/cylinder.o tmp/src/gui/mrview/window_moc.o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o tmp/src/gui/opengl/font.o tmp/src/gui/mrview/tool/odf/model.o tmp/src/gui/mrview/mode/ortho_moc.o tmp/src/dwi/gradient.o tmp/src/gui/mrview/tool/tractography/tractography_moc.o tmp/src/gui/mrview/colourmap.o tmp/src/gui/mrview/displayable_moc.o tmp/src/gui/lighting_dock.o tmp/src/surface/polygon.o tmp/src/gui/mrview/tool/fixel/image4D.o tmp/src/gui/dwi/renderer.o tmp/src/gui/opengl/shader.o tmp/src/gui/mrview/adjust_button_moc.o tmp/src/gui/mrview/combo_box_error.o tmp/src/dwi/directions/set.o tmp/src/gui/mrview/tool/connectome/edge.o tmp/src/gui/mrview/tool/odf/preview.o tmp/src/gui/mrview/tool/connectome/selection.o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o tmp/src/gui/mrview/tool/fixel/fixel_moc.o tmp/src/gui/opengl/lighting.o tmp/src/gui/dialog/image_properties.o tmp/src/gui/mrview/tool/fixel/legacy.o tmp/src/gui/mrview/tool/connectome/node_list.o tmp/src/gui/mrview/tool/fixel/directory.o tmp/src/gui/shapes/halfsphere.o tmp/src/dwi/tractography/seeding/list.o tmp/src/gui/mrview/tool/tractography/tractogram.o tmp/src/gui/mrview/tool/odf/preview_moc.o tmp/src/gui/mrview/gui_image.o tmp/src/gui/dialog/image_properties_moc.o tmp/src/gui/dialog/file.o tmp/src/gui/mrview/tool/connectome/node_list_moc.o tmp/src/gui/mrview/tool/view_moc.o tmp/src/gui/mrview/tool/connectome/connectome_moc.o tmp/src/gui/mrview/tool/screen_capture_moc.o tmp/src/gui/mrview/mode/lightbox.o tmp/src/gui/mrview/window.o tmp/src/connectome/lut.o tmp/src/dwi/shells.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/mrview/combo_box_error_moc.o tmp/src/gui/mrview/colourmap_button_moc.o tmp/src/gui/mrview/tool/roi_editor/model.o tmp/src/gui/dialog/report_exception.o tmp/src/gui/dialog/opengl.o tmp/src/gui/mrview/volume.o tmp/src/gui/mrview/tool/connectome/shaders.o tmp/src/gui/dialog/dialog.o tmp/src/gui/gui_moc.o tmp/src/gui/mrview/mode/volume.o tmp/src/gui/cursor.o tmp/src/gui/mrview/mode/base.o tmp/src/connectome/connectome.o tmp/src/gui/mrview/tool/connectome/file_data_vector.o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/mrview/tool/odf/item.o tmp/src/gui/gui.o tmp/src/dwi/tractography/rng.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/mrview/icons.o tmp/src/gui/mrview/displayable.o tmp/src/gui/mrview/tool/screen_capture.o tmp/src/gui/mrview/mode/slice.o tmp/src/dwi/tractography/file_base.o tmp/src/gui/mrview/tool/base.o tmp/src/gui/opengl/gl.o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o tmp/src/gui/mrview/colourmap_button.o tmp/src/gui/mrview/tool/odf/odf.o tmp/src/gui/mrview/tool/connectome/connectome.o tmp/src/gui/mrview/tool/overlay_moc.o tmp/src/surface/freesurfer.o tmp/src/dwi/directions/predefined.o tmp/src/gui/mrview/adjust_button.o tmp/cmd/mrview.o tmp/src/gui/mrview/tool/roi_editor/item.o tmp/src/gui/mrview/mode/ortho.o tmp/src/gui/mrview/tool/roi_editor/roi.o tmp/src/gui/mrview/tool/odf/odf_moc.o tmp/src/gui/mrview/tool/fixel/base_fixel.o tmp/src/gui/mrview/spin_box_moc.o tmp/src/gui/shapes/cube.o tmp/src/surface/mesh.o tmp/src/gui/dialog/dicom.o tmp/src/gui/mrview/tool/fixel/fixel.o tmp/src/gui/mrview/tool/connectome/node.o tmp/src/exec_version.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/color_button.o tmp/src/gui/color_button_moc.o tmp/src/gui/mrview/tool/overlay.o tmp/src/surface/scalar.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -Wl,-O1 -L/usr/lib/aarch64-linux-gnu -L/usr/X11R6/lib -lQtSvg -lQtOpenGL -lQtGui -lQtCore -lGL -lpthread -o bin/mrview g++ tmp/src/dwi/directions/predefined.o tmp/src/dwi/sdeconv/csd.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/dwi2fod.o tmp/src/dwi/gradient.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2fod g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfinfo.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfinfo g++ tmp/cmd/mrcheckerboardmask.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcheckerboardmask g++ tmp/src/stats/tfce.o tmp/src/stats/permtest.o tmp/cmd/connectomestats.o tmp/src/exec_version.o tmp/src/connectome/connectome.o tmp/src/connectome/enhance.o tmp/src/stats/permstack.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectomestats g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/shells.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/gaussian/mapper.o tmp/src/dwi/tractography/resampling/resampling.o tmp/cmd/tckmap.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/gradient.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckmap g++ tmp/cmd/tensor2metric.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tensor2metric g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/connectome/extract.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/connectome/connectome.o tmp/src/dwi/tractography/connectome/exemplar.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/cmd/connectome2tck.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectome2tck g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/connectome/connectome.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/cmd/tck2connectome.o tmp/src/dwi/tractography/connectome/matrix.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2connectome g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/cmd/5tt2gmwmi.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2gmwmi g++ tmp/cmd/shconv.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shconv g++ tmp/cmd/sh2peaks.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2peaks g++ tmp/cmd/sh2amp.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2amp g++ tmp/src/dwi/shells.o tmp/src/dwi/gradient.o tmp/cmd/dwi2mask.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2mask g++ tmp/cmd/dcminfo.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcminfo g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tcktransform.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcktransform g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/cmd/tcksample.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksample g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/editing/editing.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/weights.o tmp/cmd/tckedit.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/editing/worker.o tmp/src/dwi/tractography/editing/receiver.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckedit g++ tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o tmp/src/exec_version.o tmp/cmd/mrmetric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmetric g++ tmp/src/stats/tfce.o tmp/src/stats/permtest.o tmp/src/stats/permstack.o tmp/src/stats/cluster.o tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/cmd/mrclusterstats.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrclusterstats g++ tmp/cmd/fixelreorient.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelreorient g++ tmp/cmd/amp2sh.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2sh g++ tmp/src/registration/linear.o tmp/src/exec_version.o tmp/src/registration/transform/affine.o tmp/src/registration/transform/initialiser.o tmp/src/registration/nonlinear.o tmp/src/dwi/directions/predefined.o tmp/cmd/mrregister.o tmp/src/registration/transform/initialiser_helpers.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrregister [CC] tmp/core/progressbar.o (392/505) [MOC] tmp/src/gui/mrview/window_moc.cpp (393/505) [CC] tmp/src/gui/mrview/window_moc.o (394/505) [CC] tmp/core/file/dicom/quick_scan.o (395/505) [CC] tmp/src/gui/mrview/tool/fixel/image4D.o (396/505) [CC] 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bin/tcksift (464/505) [LB] bin/fixelcfestats (465/505) [LB] bin/sh2response (466/505) [LB] bin/tckglobal (467/505) [LB] bin/fixelcrop (468/505) [LB] bin/transformconvert (469/505) [LB] bin/mrhistogram (470/505) [LB] bin/tsfmult (471/505) [LB] bin/dwinormalise (472/505) [LB] bin/5ttcheck (473/505) [LB] bin/mrresize (474/505) [LB] bin/dirstat (475/505) [LB] bin/tckresample (476/505) [LB] bin/mrcrop (477/505) [LB] bin/mraverageheader (478/505) [LB] bin/mrinfo (479/505) [LB] bin/mesh2voxel (480/505) [LB] bin/dwi2tensor (481/505) [LB] bin/dwidenoise (482/505) [LB] bin/tcksift2 (483/505) [LB] bin/mrview (484/505) [LB] bin/dwi2fod (485/505) [LB] bin/tsfinfo (486/505) [LB] bin/mrcheckerboardmask (487/505) [LB] bin/connectomestats (488/505) [LB] bin/tckmap (489/505) [LB] bin/tensor2metric (490/505) [LB] bin/connectome2tck (491/505) [LB] bin/tck2connectome (492/505) [LB] bin/5tt2gmwmi (493/505) [LB] bin/shconv (494/505) [LB] bin/sh2peaks (495/505) [LB] bin/sh2amp (496/505) [LB] bin/dwi2mask (497/505) [LB] bin/dcminfo (498/505) [LB] bin/tcktransform (499/505) [LB] bin/tcksample (500/505) [LB] bin/tckedit (501/505) [LB] bin/mrmetric (502/505) [LB] bin/mrclusterstats (503/505) [LB] bin/fixelreorient (504/505) [LB] bin/amp2sh (505/505) [LB] bin/mrregister make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./run_tests || { cat testing.log; exit 1; } logging to "testing.log" OK building testing commands... OK running "5tt2gmwmi"... 1 of 1 passed running "5tt2vis"... 1 of 1 passed running "5ttedit"... 1 of 1 passed running "amp2sh"... 1 of 1 passed running "dirgen"... 4 of 4 passed running "dwi2adc"... 1 of 1 passed running "dwi2fod"... 5 of 5 passed running "dwi2mask"... 1 of 1 passed running "dwi2tensor"... 8 of 8 passed running "dwidenoise"... 6 of 6 passed running "dwiextract"... 2 of 2 passed running "fixel2sh"... 2 of 2 passed running "fixel2tsf"... 1 of 1 passed running "fixel2voxel"... 13 of 13 passed running "fixelconvert"... 2 of 2 passed running "fixelcorrespondence"... 1 of 1 passed running "fixelcrop"... 1 of 1 passed running "fixelreorient"... 1 of 1 passed running "fod2dec"... 12 of 12 passed running "fod2fixel"... 3 of 3 passed running "label2colour"... 3 of 3 passed running "label2mesh"... 2 of 2 passed running "labelconvert"... 4 of 4 passed running "maskfilter"... 9 of 9 passed running "mesh2voxel"... 1 of 1 passed running "meshconvert"... 10 of 10 passed running "mrcalc"... 4 of 4 passed running "mrcat"... 5 of 5 passed running "mrconvert"... 11 of 11 passed running "mrcrop"... 2 of 2 passed running "mrdegibbs"... 1 of 1 passed running "mrfilter"... 15 of 15 passed running "mrhistmatch"... 2 of 2 passed running "mrhistogram"... 0 of 0 passed running "mrmath"... 4 of 4 passed running "mrpad"... 4 of 4 passed running "mrresize"... 8 of 8 passed running "mrstats"... 2 of 2 passed running "mrthreshold"... 9 of 9 passed running "mrtransform"... 10 of 10 passed running "peaks2amp"... 1 of 1 passed running "population_template"... 2 of 2 passed running "sh2amp"... 3 of 3 passed running "sh2peaks"... 2 of 2 passed running "sh2power"... 0 of 0 passed running "sh2response"... 1 of 1 passed running "shbasis"... 4 of 4 passed running "shconv"... 2 of 2 passed running "tck2connectome"... 3 of 3 passed running "tckconvert"... 8 of 8 passed running "tckgen"... 14 of 14 passed running "tckmap"... 4 of 4 passed running "tckresample"... 5 of 5 passed running "tcksample"... 8 of 8 passed running "tcksift"... 1 of 1 passed running "tcksift2"... 1 of 1 passed running "tcktransform"... 1 of 1 passed running "tensor2metric"... 8 of 8 passed running "transformcalc"... 5 of 5 passed running "transformcompose"... 4 of 4 passed running "transformconvert"... 4 of 4 passed running "tsfdivide"... 1 of 1 passed running "tsfmult"... 1 of 1 passed running "tsfsmooth"... 1 of 1 passed running "tsfthreshold"... 2 of 2 passed running "voxel2fixel"... 1 of 1 passed running "warp2metric"... 3 of 3 passed running "warpcorrect"... 1 of 1 passed running "warpinit"... 1 of 1 passed make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_testroot dh_prep debian/rules override_dh_install make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_install # .pyc files get generated, so we remove all the .pyc/.pyo etc find debian -iname *.py? -delete make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_installdocs dh_installchangelogs dh_installman dh_perl debian/rules override_dh_link make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' cp debian/mrtrix3.links.in debian/mrtrix3.links : # Generate symlinks for all the mr* commands for f in debian/mrtrix3/usr/lib/mrtrix3/bin/mrview; do \ bn=$(basename $f); \ echo "usr/lib/mrtrix3/bin/$bn usr/bin/$bn" >> debian/mrtrix3.links; \ echo "/usr/share/man/man1/mrtrix.1.gz /usr/share/man/man1/$bn.1.gz" >> debian/mrtrix3.links; \ done echo "/usr/share/mrtrix3/matlab /usr/share/matlab/site/m/mrtrix" >> debian/mrtrix3.links echo "/usr/share/mrtrix3/matlab /usr/share/octave/site/m/mrtrix" >> debian/mrtrix3.links dh_link make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_compress -X.html make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_fixperms dh_missing dh_strip dh_makeshlibs debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_shlibdeps -l /build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2/lib make[1]: Leaving directory '/build/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'mrtrix3-dbgsym' in '../mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_arm64.deb'. dpkg-deb: building package 'mrtrix3' in '../mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_arm64.deb'. dpkg-deb: building package 'mrtrix3-doc' in '../mrtrix3-doc_3.0~rc3+git135-g2b8e7d0c2-3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/4333 and its subdirectories I: Current time: Sat Aug 7 10:18:42 -12 2021 I: pbuilder-time-stamp: 1628374722