I: pbuilder: network access will be disabled during build I: Current time: Sun Aug 9 09:23:54 -12 2020 I: pbuilder-time-stamp: 1597008234 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [meep_1.7.0-3.dsc] I: copying [./meep_1.7.0.orig.tar.gz] I: copying [./meep_1.7.0-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Feb 5 01:00:49 2019 -12 gpgv: using RSA key 6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./meep_1.7.0-3.dsc dpkg-source: info: extracting meep in meep-1.7.0 dpkg-source: info: unpacking meep_1.7.0.orig.tar.gz dpkg-source: info: unpacking meep_1.7.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying c++14.patch dpkg-source: info: applying fix-test.patch dpkg-source: info: applying libgeom-fix-include.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/20805/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='20805' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.w8Sjym91Qb/pbuilderrc_2P6l --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.w8Sjym91Qb/b1 --logfile b1/build.log meep_1.7.0-3.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled12-arm64 4.4.0-186-generic #216-Ubuntu SMP Wed Jul 1 05:35:21 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 8 20:26 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/20805/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: gfortran, debhelper (>= 11), libctl-dev (>= 4.1.4-2), pkg-config, libharminv-dev (>= 1.4.1), zlib1g-dev, libfftw3-dev, libgsl-dev, liblapack-dev, chrpath, libatlas-base-dev, libhdf5-dev, swig, mpb-dev, mpb, python-dev, python-numpy, python-h5py, python-scipy dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 11); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libctl-dev (>= 4.1.4-2); however: Package libctl-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libharminv-dev (>= 1.4.1); however: Package libharminv-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on libatlas-base-dev; however: Package libatlas-base-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. pbuilder-satisfydepends-dummy depends on mpb-dev; however: Package mpb-dev is not installed. pbuilder-satisfydepends-dummy depends on mpb; however: Package mpb is not installed. pbuilder-satisfydepends-dummy depends on python-dev; however: Package python-dev is not installed. pbuilder-satisfydepends-dummy depends on python-numpy; however: Package python-numpy is not installed. pbuilder-satisfydepends-dummy depends on python-h5py; however: Package python-h5py is not installed. pbuilder-satisfydepends-dummy depends on python-scipy; however: Package python-scipy is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} groff-base{a} guile-2.2{a} guile-2.2-dev{a} guile-2.2-libs{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libatlas-base-dev{a} libatlas3-base{a} libblas-dev{a} libblas3{a} libbsd0{a} libcroco3{a} libctl-dev{a} libctl7{a} libelf1{a} libevent-2.1-6{a} libevent-core-2.1-6{a} libevent-pthreads-2.1-6{a} libexpat1{a} libexpat1-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libgc-dev{a} libgc1c2{a} libgfortran-8-dev{a} libgfortran5{a} libglib2.0-0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgsl-dev{a} libgsl23{a} libgslcblas0{a} libharminv-dev{a} libharminv3{a} libhdf5-103{a} libhdf5-cpp-103{a} libhdf5-dev{a} libhdf5-openmpi-103{a} libhwloc-plugins{a} libhwloc5{a} libibverbs1{a} libicu63{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} liblapack-dev{a} liblapack3{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnl-3-200{a} libnl-route-3-200{a} libnuma1{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix2{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libreadline-dev{a} libreadline7{a} libsigsegv2{a} libssl1.1{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} mime-support{a} mpb{a} mpb-dev{a} mpb-scm{a} ocl-icd-libopencl1{a} pkg-config{a} po-debconf{a} python{a} python-decorator{a} python-dev{a} python-h5py{a} python-minimal{a} python-numpy{a} python-pkg-resources{a} python-scipy{a} python-six{a} python2{a} python2-dev{a} python2-minimal{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} readline-common{a} sensible-utils{a} swig{a} swig3.0{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl h5utils ibverbs-providers libarchive-cpio-perl libctl-doc libglib2.0-data libgpm2 libmail-sendmail-perl lynx openmpi-bin python-pil shared-mime-info wget xdg-user-dirs 0 packages upgraded, 128 newly installed, 0 to remove and 0 not upgraded. Need to get 110 MB of archives. After unpacking 409 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 libpython2.7-minimal arm64 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 python2.7-minimal arm64 2.7.16-2+deb10u1 [1292 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 python2-minimal arm64 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 python-minimal arm64 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libpython2.7-stdlib arm64 2.7.16-2+deb10u1 [1890 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 python2.7 arm64 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 libpython2-stdlib arm64 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libpython-stdlib arm64 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 python2 arm64 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 python arm64 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 chrpath arm64 0.16-2+b1 [16.0 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libgfortran5 arm64 8.3.0-6 [298 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 libgfortran-8-dev arm64 8.3.0-6 [346 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 gfortran-8 arm64 8.3.0-6 [7861 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 gfortran arm64 4:8.3.0-1 [1420 B] Get: 54 http://deb.debian.org/debian buster/main arm64 libgc1c2 arm64 1:7.6.4-0.4 [214 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 libltdl7 arm64 2.4.6-9 [389 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 guile-2.2-libs arm64 2.2.4+1-2+deb10u1 [4938 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 guile-2.2 arm64 2.2.4+1-2+deb10u1 [20.3 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 libncurses-dev arm64 6.1+20181013-2+deb10u2 [324 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 libncurses5-dev arm64 6.1+20181013-2+deb10u2 [948 B] Get: 60 http://deb.debian.org/debian buster/main arm64 libreadline-dev arm64 7.0-5 [128 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 libltdl-dev arm64 2.4.6-9 [162 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 libgmpxx4ldbl arm64 2:6.1.2+dfsg-4 [22.6 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 libgmp-dev arm64 2:6.1.2+dfsg-4 [608 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 libgc-dev arm64 1:7.6.4-0.4 [371 kB] Get: 65 http://deb.debian.org/debian buster/main arm64 pkg-config arm64 0.29-6 [62.2 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 guile-2.2-dev arm64 2.2.4+1-2+deb10u1 [599 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 hdf5-helpers arm64 1.10.4+repack-10 [35.2 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 libaec0 arm64 1.0.2-1 [18.8 kB] Get: 69 http://deb.debian.org/debian buster/main arm64 libsz2 arm64 1.0.2-1 [6456 B] Get: 70 http://deb.debian.org/debian buster/main arm64 libaec-dev arm64 1.0.2-1 [17.1 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 libatlas3-base arm64 3.10.3-8 [2409 kB] Get: 72 http://deb.debian.org/debian buster/main arm64 libatlas-base-dev arm64 3.10.3-8 [2954 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 libblas3 arm64 3.8.0-2 [100 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libblas-dev arm64 3.8.0-2 [105 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libctl7 arm64 4.1.4-3 [94.8 kB] Get: 76 http://deb.debian.org/debian buster/main arm64 libctl-dev arm64 4.1.4-3 [65.7 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 libevent-2.1-6 arm64 2.1.8-stable-4 [150 kB] Get: 78 http://deb.debian.org/debian buster/main arm64 libevent-core-2.1-6 arm64 2.1.8-stable-4 [112 kB] Get: 79 http://deb.debian.org/debian buster/main arm64 libevent-pthreads-2.1-6 arm64 2.1.8-stable-4 [47.7 kB] Get: 80 http://deb.debian.org/debian buster/main arm64 libexpat1-dev arm64 2.2.6-2+deb10u1 [128 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 libfftw3-double3 arm64 3.3.8-2 [385 kB] Get: 82 http://deb.debian.org/debian buster/main arm64 libfftw3-long3 arm64 3.3.8-2 [526 kB] Get: 83 http://deb.debian.org/debian buster/main arm64 libfftw3-single3 arm64 3.3.8-2 [630 kB] Get: 84 http://deb.debian.org/debian buster/main arm64 libfftw3-bin arm64 3.3.8-2 [47.4 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 libfftw3-dev arm64 3.3.8-2 [1455 kB] Get: 86 http://deb.debian.org/debian buster/main arm64 libgslcblas0 arm64 2.5+dfsg-6 [69.5 kB] Get: 87 http://deb.debian.org/debian buster/main arm64 libgsl23 arm64 2.5+dfsg-6 [760 kB] Get: 88 http://deb.debian.org/debian buster/main arm64 libgsl-dev arm64 2.5+dfsg-6 [938 kB] Get: 89 http://deb.debian.org/debian buster/main arm64 liblapack3 arm64 3.8.0-2 [1489 kB] Get: 90 http://deb.debian.org/debian buster/main arm64 libharminv3 arm64 1.4.1-2 [13.7 kB] Get: 91 http://deb.debian.org/debian buster/main arm64 libharminv-dev arm64 1.4.1-2 [4916 B] Get: 92 http://deb.debian.org/debian buster/main arm64 libhdf5-103 arm64 1.10.4+repack-10 [1168 kB] Get: 93 http://deb.debian.org/debian buster/main arm64 libhdf5-cpp-103 arm64 1.10.4+repack-10 [132 kB] Get: 94 http://deb.debian.org/debian buster/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1 [210 kB] Get: 95 http://deb.debian.org/debian buster/main arm64 libjpeg62-turbo arm64 1:1.5.2-2+b1 [115 kB] Get: 96 http://deb.debian.org/debian buster/main arm64 libjpeg62-turbo-dev arm64 1:1.5.2-2+b1 [186 kB] Get: 97 http://deb.debian.org/debian buster/main arm64 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get: 98 http://deb.debian.org/debian buster/main arm64 libhdf5-dev arm64 1.10.4+repack-10 [2683 kB] Get: 99 http://deb.debian.org/debian buster/main arm64 libnuma1 arm64 2.0.12-1 [25.6 kB] Get: 100 http://deb.debian.org/debian buster/main arm64 libhwloc5 arm64 1.11.12-3 [97.9 kB] Get: 101 http://deb.debian.org/debian buster/main arm64 libnl-3-200 arm64 3.4.0-1 [54.9 kB] Get: 102 http://deb.debian.org/debian buster/main arm64 libnl-route-3-200 arm64 3.4.0-1 [134 kB] Get: 103 http://deb.debian.org/debian buster/main arm64 libibverbs1 arm64 22.1-1 [47.8 kB] Get: 104 http://deb.debian.org/debian buster/main arm64 libpciaccess0 arm64 0.14-1 [51.0 kB] Get: 105 http://deb.debian.org/debian buster/main arm64 ocl-icd-libopencl1 arm64 2.2.12-2 [37.4 kB] Get: 106 http://deb.debian.org/debian buster/main arm64 libhwloc-plugins arm64 1.11.12-3 [16.9 kB] Get: 107 http://deb.debian.org/debian buster/main arm64 libpmix2 arm64 3.1.2-3 [455 kB] Get: 108 http://deb.debian.org/debian buster/main arm64 libopenmpi3 arm64 3.1.3-11 [1996 kB] Get: 109 http://deb.debian.org/debian buster/main arm64 libhdf5-openmpi-103 arm64 1.10.4+repack-10 [1203 kB] Get: 110 http://deb.debian.org/debian buster/main arm64 liblapack-dev arm64 3.8.0-2 [1524 kB] Get: 111 http://deb.debian.org/debian buster/main arm64 libpython2.7 arm64 2.7.16-2+deb10u1 [958 kB] Get: 112 http://deb.debian.org/debian buster/main arm64 libpython2.7-dev arm64 2.7.16-2+deb10u1 [31.5 MB] Get: 113 http://deb.debian.org/debian buster/main arm64 libpython2-dev arm64 2.7.16-1 [20.9 kB] Get: 114 http://deb.debian.org/debian buster/main arm64 libpython-dev arm64 2.7.16-1 [20.9 kB] Get: 115 http://deb.debian.org/debian buster/main arm64 mpb-scm all 1.7.0-5 [14.9 kB] Get: 116 http://deb.debian.org/debian buster/main arm64 mpb arm64 1.7.0-5 [187 kB] Get: 117 http://deb.debian.org/debian buster/main arm64 mpb-dev arm64 1.7.0-5 [10.9 kB] Get: 118 http://deb.debian.org/debian buster/main arm64 python-decorator all 4.3.0-1.1 [14.4 kB] Get: 119 http://deb.debian.org/debian buster/main arm64 python2.7-dev arm64 2.7.16-2+deb10u1 [296 kB] Get: 120 http://deb.debian.org/debian buster/main arm64 python2-dev arm64 2.7.16-1 [1216 B] Get: 121 http://deb.debian.org/debian buster/main arm64 python-dev arm64 2.7.16-1 [1192 B] Get: 122 http://deb.debian.org/debian buster/main arm64 python-pkg-resources all 40.8.0-1 [182 kB] Get: 123 http://deb.debian.org/debian buster/main arm64 python-numpy arm64 1:1.16.2-1 [1975 kB] Get: 124 http://deb.debian.org/debian buster/main arm64 python-six all 1.12.0-1 [15.7 kB] Get: 125 http://deb.debian.org/debian buster/main arm64 python-h5py arm64 2.8.0-3 [572 kB] Get: 126 http://deb.debian.org/debian buster/main arm64 python-scipy arm64 1.1.0-7 [9327 kB] Get: 127 http://deb.debian.org/debian buster/main arm64 swig3.0 arm64 3.0.12-2 [1321 kB] Get: 128 http://deb.debian.org/debian buster/main arm64 swig arm64 3.0.12-2 [310 kB] Fetched 110 MB in 10s (10.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_arm64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:arm64. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../08-python2-minimal_2.7.16-1_arm64.deb ... Unpacking python2-minimal (2.7.16-1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../09-python-minimal_2.7.16-1_arm64.deb ... Unpacking python-minimal (2.7.16-1) ... Selecting previously unselected package libssl1.1:arm64. Preparing to unpack .../10-libssl1.1_1.1.1d-0+deb10u3_arm64.deb ... Unpacking libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Selecting previously unselected package mime-support. Preparing to unpack .../11-mime-support_3.62_all.deb ... Unpacking mime-support (3.62) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../12-libexpat1_2.2.6-2+deb10u1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.6-2+deb10u1) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:arm64. Preparing to unpack .../14-libreadline7_7.0-5_arm64.deb ... Unpacking libreadline7:arm64 (7.0-5) ... Selecting previously unselected package libpython2.7-stdlib:arm64. Preparing to unpack .../15-libpython2.7-stdlib_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-stdlib:arm64. Preparing to unpack .../17-libpython2-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython2-stdlib:arm64 (2.7.16-1) ... Selecting previously unselected package libpython-stdlib:arm64. Preparing to unpack .../18-libpython-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython-stdlib:arm64 (2.7.16-1) ... Setting up libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20631 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_arm64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20664 files and directories currently installed.) Preparing to unpack .../000-python_2.7.16-1_arm64.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../003-libmagic1_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.19.8.1-9_arm64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../006-libsigsegv2_2.12-2_arm64.deb ... Unpacking libsigsegv2:arm64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../007-m4_1.4.18-2_arm64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../008-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../009-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../010-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../011-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package chrpath. Preparing to unpack .../012-chrpath_0.16-2+b1_arm64.deb ... Unpacking chrpath (0.16-2+b1) ... Selecting previously unselected package libtool. Preparing to unpack .../013-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../014-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../015-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../016-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../017-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../018-libelf1_0.176-1.1_arm64.deb ... Unpacking libelf1:arm64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../019-dwz_0.12-3_arm64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../020-libglib2.0-0_2.58.3-2+deb10u2_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... Selecting previously unselected package libicu63:arm64. Preparing to unpack .../021-libicu63_63.1-6+deb10u1_arm64.deb ... Unpacking libicu63:arm64 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../022-libxml2_2.9.4+dfsg1-7+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libcroco3:arm64. Preparing to unpack .../023-libcroco3_0.6.12-3_arm64.deb ... Unpacking libcroco3:arm64 (0.6.12-3) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../024-libncurses6_6.1+20181013-2+deb10u2_arm64.deb ... Unpacking libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package gettext. Preparing to unpack .../025-gettext_0.19.8.1-9_arm64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../026-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../027-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../028-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../029-libgfortran5_8.3.0-6_arm64.deb ... Unpacking libgfortran5:arm64 (8.3.0-6) ... Selecting previously unselected package libgfortran-8-dev:arm64. Preparing to unpack .../030-libgfortran-8-dev_8.3.0-6_arm64.deb ... Unpacking libgfortran-8-dev:arm64 (8.3.0-6) ... Selecting previously unselected package gfortran-8. Preparing to unpack .../031-gfortran-8_8.3.0-6_arm64.deb ... Unpacking gfortran-8 (8.3.0-6) ... Selecting previously unselected package gfortran. Preparing to unpack .../032-gfortran_4%3a8.3.0-1_arm64.deb ... Unpacking gfortran (4:8.3.0-1) ... Selecting previously unselected package libgc1c2:arm64. Preparing to unpack .../033-libgc1c2_1%3a7.6.4-0.4_arm64.deb ... Unpacking libgc1c2:arm64 (1:7.6.4-0.4) ... Selecting previously unselected package libltdl7:arm64. Preparing to unpack .../034-libltdl7_2.4.6-9_arm64.deb ... Unpacking libltdl7:arm64 (2.4.6-9) ... Selecting previously unselected package guile-2.2-libs:arm64. Preparing to unpack .../035-guile-2.2-libs_2.2.4+1-2+deb10u1_arm64.deb ... Unpacking guile-2.2-libs:arm64 (2.2.4+1-2+deb10u1) ... Selecting previously unselected package guile-2.2. Preparing to unpack .../036-guile-2.2_2.2.4+1-2+deb10u1_arm64.deb ... Unpacking guile-2.2 (2.2.4+1-2+deb10u1) ... Selecting previously unselected package libncurses-dev:arm64. Preparing to unpack .../037-libncurses-dev_6.1+20181013-2+deb10u2_arm64.deb ... Unpacking libncurses-dev:arm64 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libncurses5-dev:arm64. Preparing to unpack .../038-libncurses5-dev_6.1+20181013-2+deb10u2_arm64.deb ... Unpacking libncurses5-dev:arm64 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libreadline-dev:arm64. Preparing to unpack .../039-libreadline-dev_7.0-5_arm64.deb ... Unpacking libreadline-dev:arm64 (7.0-5) ... Selecting previously unselected package libltdl-dev:arm64. Preparing to unpack .../040-libltdl-dev_2.4.6-9_arm64.deb ... Unpacking libltdl-dev:arm64 (2.4.6-9) ... Selecting previously unselected package libgmpxx4ldbl:arm64. Preparing to unpack .../041-libgmpxx4ldbl_2%3a6.1.2+dfsg-4_arm64.deb ... Unpacking libgmpxx4ldbl:arm64 (2:6.1.2+dfsg-4) ... Selecting previously unselected package libgmp-dev:arm64. Preparing to unpack .../042-libgmp-dev_2%3a6.1.2+dfsg-4_arm64.deb ... Unpacking libgmp-dev:arm64 (2:6.1.2+dfsg-4) ... Selecting previously unselected package libgc-dev:arm64. Preparing to unpack .../043-libgc-dev_1%3a7.6.4-0.4_arm64.deb ... Unpacking libgc-dev:arm64 (1:7.6.4-0.4) ... Selecting previously unselected package pkg-config. Preparing to unpack .../044-pkg-config_0.29-6_arm64.deb ... Unpacking pkg-config (0.29-6) ... Selecting previously unselected package guile-2.2-dev. Preparing to unpack .../045-guile-2.2-dev_2.2.4+1-2+deb10u1_arm64.deb ... Unpacking guile-2.2-dev (2.2.4+1-2+deb10u1) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../046-hdf5-helpers_1.10.4+repack-10_arm64.deb ... Unpacking hdf5-helpers (1.10.4+repack-10) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../047-libaec0_1.0.2-1_arm64.deb ... Unpacking libaec0:arm64 (1.0.2-1) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../048-libsz2_1.0.2-1_arm64.deb ... Unpacking libsz2:arm64 (1.0.2-1) ... Selecting previously unselected package libaec-dev:arm64. Preparing to unpack .../049-libaec-dev_1.0.2-1_arm64.deb ... Unpacking libaec-dev:arm64 (1.0.2-1) ... 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Setting up mpb-dev (1.7.0-5) ... Setting up libpciaccess0:arm64 (0.14-1) ... Setting up mpb-scm (1.7.0-5) ... Setting up libfftw3-single3:arm64 (3.3.8-2) ... Setting up mime-support (3.62) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up libgslcblas0:arm64 (2.5+dfsg-6) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libgc1c2:arm64 (1:7.6.4-0.4) ... Setting up libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Setting up libmagic1:arm64 (1:5.35-4+deb10u1) ... Setting up libfftw3-long3:arm64 (3.3.8-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libaec0:arm64 (1.0.2-1) ... Setting up libicu63:arm64 (63.1-6+deb10u1) ... Setting up autotools-dev (20180224.1) ... Setting up libgmpxx4ldbl:arm64 (2:6.1.2+dfsg-4) ... Setting up libexpat1-dev:arm64 (2.2.6-2+deb10u1) ... Setting up libjpeg62-turbo:arm64 (1:1.5.2-2+b1) ... Setting up swig3.0 (3.0.12-2) ... Setting up libjpeg62-turbo-dev:arm64 (1:1.5.2-2+b1) ... Setting up libgsl23:arm64 (2.5+dfsg-6) ... Setting up libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up pkg-config (0.29-6) ... Setting up libltdl7:arm64 (2.4.6-9) ... Setting up libfftw3-double3:arm64 (3.3.8-2) ... Setting up libevent-core-2.1-6:arm64 (2.1.8-stable-4) ... Setting up libgfortran5:arm64 (8.3.0-6) ... Setting up libevent-2.1-6:arm64 (2.1.8-stable-4) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1) ... Setting up libnuma1:arm64 (2.0.12-1) ... Setting up sensible-utils (0.0.12) ... Setting up ocl-icd-libopencl1:arm64 (2.2.12-2) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libnl-3-200:arm64 (3.4.0-1) ... Setting up libgc-dev:arm64 (1:7.6.4-0.4) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up chrpath (0.16-2+b1) ... Setting up libsz2:arm64 (1.0.2-1) ... Setting up libreadline7:arm64 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libgfortran-8-dev:arm64 (8.3.0-6) ... Setting up libevent-pthreads-2.1-6:arm64 (2.1.8-stable-4) ... Setting up libncurses-dev:arm64 (6.1+20181013-2+deb10u2) ... Setting up libgsl-dev (2.5+dfsg-6) ... Setting up swig (3.0.12-2) ... Setting up libgmp-dev:arm64 (2:6.1.2+dfsg-4) ... Setting up libatlas3-base:arm64 (3.10.3-8) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/atlas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/atlas/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libtool (2.4.6-9) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libhwloc5:arm64 (1.11.12-3) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libaec-dev:arm64 (1.0.2-1) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up m4 (1.4.18-2) ... Setting up libreadline-dev:arm64 (7.0-5) ... Setting up libhwloc-plugins:arm64 (1.11.12-3) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libatlas-base-dev:arm64 (3.10.3-8) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/atlas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/atlas/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up libnl-route-3-200:arm64 (3.4.0-1) ... Setting up libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Setting up libblas3:arm64 (3.8.0-2) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:arm64 (0.6.12-3) ... Setting up libharminv3 (1.4.1-2) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libncurses5-dev:arm64 (6.1+20181013-2+deb10u2) ... Setting up libharminv-dev (1.4.1-2) ... Setting up libfftw3-dev:arm64 (3.3.8-2) ... Setting up guile-2.2-libs:arm64 (2.2.4+1-2+deb10u1) ... Setting up libblas-dev:arm64 (3.8.0-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libibverbs1:arm64 (22.1-1) ... Setting up libpython2.7:arm64 (2.7.16-2+deb10u1) ... Setting up liblapack3:arm64 (3.8.0-2) ... Setting up libpython2.7-dev:arm64 (2.7.16-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up guile-2.2 (2.2.4+1-2+deb10u1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/guile/2.2/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libpmix2:arm64 (3.1.2-3) ... Setting up libpython2-stdlib:arm64 (2.7.16-1) ... Setting up libopenmpi3:arm64 (3.1.3-11) ... Setting up libhdf5-cpp-103:arm64 (1.10.4+repack-10) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libltdl-dev:arm64 (2.4.6-9) ... Setting up libpython-stdlib:arm64 (2.7.16-1) ... Setting up libctl7 (4.1.4-3) ... Setting up guile-2.2-dev (2.2.4+1-2+deb10u1) ... update-alternatives: using /usr/bin/guile-config-2.2 to provide /usr/bin/guile-config (guile-config) in auto mode Setting up libhdf5-openmpi-103:arm64 (1.10.4+repack-10) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up liblapack-dev:arm64 (3.8.0-2) ... Setting up libpython2-dev:arm64 (2.7.16-1) ... Setting up python (2.7.16-1) ... Setting up python2.7-dev (2.7.16-2+deb10u1) ... Setting up python2-dev (2.7.16-1) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up po-debconf (1.0.21) ... Setting up libctl-dev (4.1.4-3) ... Setting up python-decorator (4.3.0-1.1) ... Setting up libpython-dev:arm64 (2.7.16-1) ... Setting up python-six (1.12.0-1) ... Setting up mpb (1.7.0-5) ... Setting up python-dev (2.7.16-1) ... Setting up python-numpy (1:1.16.2-1) ... Setting up python-scipy (1.1.0-7) ... Setting up python-h5py (2.8.0-3) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/meep-1.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package meep dpkg-buildpackage: info: source version 1.7.0-3 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by Thorsten Alteholz dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/build/meep-1.7.0' # we do not need this anymore rm -f tests/latest_output dh_clean make[1]: Leaving directory '/build/meep-1.7.0' debian/rules build dh build --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:66: installing './compile' configure.ac:66: installing './config.guess' configure.ac:66: installing './config.sub' configure.ac:11: installing './install-sh' configure.ac:11: installing './missing' libmeepgeom/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' python/Makefile.am:115: installing './py-compile' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/meep-1.7.0' F77=gfortran dh_auto_configure -- --host=aarch64-linux-gnu --build=aarch64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --enable-maintainer-mode ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --libexecdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=aarch64-linux-gnu --build=aarch64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --enable-maintainer-mode configure: WARNING: unrecognized options: --enable-cxx checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for aarch64-linux-gnu-g++... aarch64-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether aarch64-linux-gnu-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of aarch64-linux-gnu-g++... none checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to accept ISO C89... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of aarch64-linux-gnu-gcc... none checking for C++ compiler vendor... gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by aarch64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/aarch64-linux-gnu-nm -B checking the name lister (/usr/bin/aarch64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for aarch64-linux-gnu-objdump... aarch64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for aarch64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-linux-gnu-ar... aarch64-linux-gnu-ar checking for archiver @FILE support... @ checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for aarch64-linux-gnu-ranlib... aarch64-linux-gnu-ranlib checking command to parse /usr/bin/aarch64-linux-gnu-nm -B output from aarch64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for aarch64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... aarch64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if aarch64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for aarch64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if aarch64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if aarch64-linux-gnu-gcc static flag -static works... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the aarch64-linux-gnu-gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... aarch64-linux-gnu-g++ -E checking for ld used by aarch64-linux-gnu-g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the aarch64-linux-gnu-g++ linker (/usr/bin/ld) supports shared libraries... yes checking for aarch64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if aarch64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if aarch64-linux-gnu-g++ static flag -static works... yes checking if aarch64-linux-gnu-g++ supports -c -o file.o... yes checking if aarch64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the aarch64-linux-gnu-g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for latex2html... no configure: WARNING: Cannot find latex2html in your path! checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking for aarch64-linux-gnu-g77... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for sgemm_... no checking for ATL_xerbla in -latlas... yes checking for sgemm_ in -lf77blas... yes checking for cblas_dgemm in -lcblas... yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for pkg-config... /usr/bin/pkg-config checking for harminv >= 1.1... yes checking HARMINV_CFLAGS... checking HARMINV_LIBS... -lharminv checking mpb.h usability... yes checking mpb.h presence... yes checking for mpb.h... yes checking for maxwell_target_operator1 in -lmpb... yes checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for guile-config... guile-config checking if linking to guile works... yes checking libguile.h usability... yes checking libguile.h presence... yes checking for libguile.h... yes checking guile/gh.h usability... no checking guile/gh.h presence... no checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking ctl.h usability... yes checking ctl.h presence... yes checking for ctl.h... yes checking whether libctl version is at least 4.1.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking libGDSII.h usability... no checking libGDSII.h presence... no checking for libGDSII.h... no checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes checking whether to catch and ignore SIGFPE signals... yes checking whether time.h and sys/time.h may both be included... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for jn... yes checking for C/C++ restrict keyword... __restrict checking for python... /usr/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/dist-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages checking for Python include directory... /usr/include/python2.7 checking Python.h usability... yes checking Python.h presence... yes checking for Python.h... yes checking for Numpy include directory... /usr/lib/python2.7/dist-packages/numpy/core/include checking for numpy/arrayobject.h... yes checking for coverage module... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating scheme/Makefile config.status: creating scheme/meep.scm config.status: creating libmeepgeom/Makefile config.status: creating libpympb/Makefile config.status: creating python/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --enable-cxx make[1]: Leaving directory '/build/meep-1.7.0' dh_auto_build make -j8 make[1]: Entering directory '/build/meep-1.7.0' make all-recursive make[2]: Entering directory '/build/meep-1.7.0' Making all in src make[3]: Entering directory '/build/meep-1.7.0/src' make sphere_quad (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp make[4]: Entering directory '/build/meep-1.7.0/src' make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o sphere-quad.o sphere-quad.cpp /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o sphere_quad sphere-quad.o -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o sphere_quad sphere-quad.o -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-1.7.0/src' (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../src/sphere_quad) > sphere-quad.h make all-am make[4]: Entering directory '/build/meep-1.7.0/src' /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o array_slice.lo array_slice.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o anisotropic_averaging.lo anisotropic_averaging.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bands.lo bands.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o boundaries.lo boundaries.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bicgstab.lo bicgstab.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o casimir.lo casimir.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o control_c.lo control_c.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cw_fields.lo cw_fields.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bicgstab.cpp -fPIC -DPIC -o .libs/bicgstab.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c control_c.cpp -fPIC -DPIC -o .libs/control_c.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c anisotropic_averaging.cpp -fPIC -DPIC -o .libs/anisotropic_averaging.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c casimir.cpp -fPIC -DPIC -o .libs/casimir.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c array_slice.cpp -fPIC -DPIC -o .libs/array_slice.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o .libs/cw_fields.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c boundaries.cpp -fPIC -DPIC -o .libs/boundaries.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c bands.cpp -fPIC -DPIC -o .libs/bands.o boundaries.cpp: In member function 'meep::ivec meep::fields::ilattice_vector(meep::direction) const': boundaries.cpp:68:5: warning: this statement may fall through [-Wimplicit-fallthrough=] switch (d) { ^~~~~~ boundaries.cpp:73:3: note: here case D3: ^~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c control_c.cpp -fPIC -DPIC -o control_c.o >/dev/null 2>&1 libtool: compile: 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libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o .libs/energy_and_flux.o dft.cpp: In function 'cdouble* meep::collapse_empty_dimensions(cdouble*, int*, int*, meep::volume)': dft.cpp:916:54: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'cdouble' {aka 'struct std::complex'}; use assignment or value-initialization instead [-Wclass-memaccess] memset(reduced_array,0,reduced_size*sizeof(cdouble)); ^ In file included from meep/vec.hpp:22, from meep.hpp:24, from dft.cpp:24: /usr/include/c++/8/complex:1221:12: note: 'cdouble' {aka 'struct std::complex'} declared here struct complex ^~~~~~~~~~~~~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c cw_fields.cpp -fPIC -DPIC -o cw_fields.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c dft_ldos.cpp -fPIC -DPIC -o dft_ldos.o >/dev/null 2>&1 energy_and_flux.cpp: In member function 'double meep::fields::flux_in_box_wrongH(meep::direction, const meep::volume&)': energy_and_flux.cpp:219:26: warning: '*((void*)& cH +4)' may be used uninitialized in this function [-Wmaybe-uninitialized] cs[0] = cE[i]; cs[1] = cH[i]; ~~~~~~^~~~~~~ energy_and_flux.cpp:219:26: warning: 'cH' may be used uninitialized in this function [-Wmaybe-uninitialized] energy_and_flux.cpp:219:11: warning: '*((void*)& cE +4)' may be used uninitialized in this function [-Wmaybe-uninitialized] cs[0] = cE[i]; cs[1] = cH[i]; ~~~~~~^~~~~~~ energy_and_flux.cpp:219:11: warning: 'cE' may be used uninitialized in this function [-Wmaybe-uninitialized] /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o fields.lo fields.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c energy_and_flux.cpp -fPIC -DPIC -o energy_and_flux.o >/dev/null 2>&1 libtool: compile: 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.libs/output_directory.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate.cpp -fPIC -DPIC -o integrate.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mympi.cpp -fPIC -DPIC -o mympi.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o random.lo random.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c monitor.cpp -fPIC -DPIC -o monitor.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c integrate2.cpp -fPIC -DPIC -o integrate2.o >/dev/null 2>&1 output_directory.cpp: In member function 'void meep::structure::set_output_directory(const char*)': output_directory.cpp:43:10: warning: ignoring return value of 'int symlink(const char*, const char*)', declared with attribute warn_unused_result [-Wunused-result] symlink(name, symlink_name); ~~~~~~~^~~~~~~~~~~~~~~~~~~~ output_directory.cpp: In function 'const char* meep::make_output_directory(const char*, const char*)': output_directory.cpp:115:32: warning: '.cpp' directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] snprintf(sourcename, buflen, "%s.cpp", stripped_name); ^~~~~~~~ In file included from /usr/include/stdio.h:873, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 304 bytes into a destination of size 300 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:125:32: warning: '-out' directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] snprintf(outdirname, buflen, "%s-out", basename); ^~~~~~~~ In file included from /usr/include/stdio.h:873, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 304 bytes into a destination of size 300 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:135:32: warning: '%s' directive output may be truncated writing up to 299 bytes into a region of size between 0 and 299 [-Wformat-truncation=] snprintf(outsrcname, buflen, "%s/%s", outdirname, sourcename); ^~~~~~~ ~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 2 and 600 bytes into a destination of size 300 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ output_directory.cpp:131:36: warning: '-out-' directive output may be truncated writing 5 bytes into a region of size between 1 and 300 [-Wformat-truncation=] snprintf(outdirname, buflen, "%s-out-%d", basename, i++); ^~~~~~~~~~~ output_directory.cpp:131:36: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:873, from output_directory.cpp:18: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 7 and 315 bytes into a destination of size 300 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c output_directory.cpp -fPIC -DPIC -o output_directory.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o multilevel-atom.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time 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-I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o structure_dump.lo structure_dump.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o .libs/structure_dump.o /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o susceptibility.lo susceptibility.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step.cpp -fPIC -DPIC -o step.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o .libs/susceptibility.o /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o time.lo time.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o .libs/time.o structure_dump.cpp: In member function 'void meep::structure::dump(const char*)': structure_dump.cpp:256:31: warning: '_' directive output may be truncated writing 1 byte into a region of size between 0 and 9 [-Wformat-truncation=] snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); ^~~~~~~~~~~~~~~~~~~ structure_dump.cpp:256:31: note: using the range [-2147483648, 2147483647] for directive argument In file included from /usr/include/stdio.h:873, from structure_dump.cpp:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 14 and 43 bytes into a destination of size 20 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 structure_dump.cpp: In member function 'void meep::structure::load(const char*)': structure_dump.cpp:545:31: warning: '%d' directive output may be truncated writing between 1 and 2 bytes into a region of size between 1 and 10 [-Wformat-truncation=] snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); ^~~~~~~~~~~~~~~~~~~ structure_dump.cpp:545:31: note: directive argument in the range [0, 20] structure_dump.cpp:545:31: note: directive argument in the range [0, 5] In file included from /usr/include/stdio.h:873, from structure_dump.cpp:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 14 and 24 bytes into a destination of size 20 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ susceptibility.cpp:158:13: warning: 'bool meep::lorentzian_unstable(double, double, double)' defined but not used [-Wunused-function] static bool lorentzian_unstable(double omega_0, double gamma, double dt) { ^~~~~~~~~~~~~~~~~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure_dump.cpp -fPIC -DPIC -o structure_dump.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_eh.lo update_eh.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_db.cpp -fPIC -DPIC -o step_db.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o .libs/update_eh.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o mpb.lo mpb.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c susceptibility.cpp -fPIC -DPIC -o susceptibility.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o update_pols.lo update_pols.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o vec.lo vec.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o .libs/vec.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_eh.cpp -fPIC -DPIC -o update_eh.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic.lo step_generic.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o .libs/step_generic.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o .libs/step_generic_stride1.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c structure.cpp -fPIC -DPIC -o structure.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o libmeep.la -rpath /usr/lib/aarch64-linux-gnu array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo control_c.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo step_generic_stride1.lo -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/array_slice.o .libs/anisotropic_averaging.o .libs/bands.o .libs/boundaries.o .libs/bicgstab.o .libs/casimir.o .libs/control_c.o .libs/cw_fields.o .libs/dft.o .libs/dft_ldos.o .libs/energy_and_flux.o .libs/fields.o .libs/loop_in_chunks.o .libs/h5fields.o .libs/h5file.o .libs/initialize.o .libs/integrate.o .libs/integrate2.o .libs/monitor.o .libs/mympi.o .libs/multilevel-atom.o .libs/near2far.o .libs/output_directory.o .libs/random.o .libs/sources.o .libs/step.o .libs/step_db.o .libs/stress.o .libs/structure.o .libs/structure_dump.o .libs/susceptibility.o .libs/time.o .libs/update_eh.o .libs/mpb.o .libs/update_pols.o .libs/vec.o .libs/step_generic.o .libs/step_generic_stride1.o -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libmeep.so.12 -o .libs/libmeep.so.12.0.0 libtool: link: (cd ".libs" && rm -f "libmeep.so.12" && ln -s "libmeep.so.12.0.0" "libmeep.so.12") libtool: link: (cd ".libs" && rm -f "libmeep.so" && ln -s "libmeep.so.12.0.0" "libmeep.so") libtool: link: aarch64-linux-gnu-ar cru .libs/libmeep.a array_slice.o anisotropic_averaging.o bands.o boundaries.o bicgstab.o casimir.o control_c.o cw_fields.o dft.o dft_ldos.o energy_and_flux.o fields.o loop_in_chunks.o h5fields.o h5file.o initialize.o integrate.o integrate2.o monitor.o mympi.o multilevel-atom.o near2far.o output_directory.o random.o sources.o step.o step_db.o stress.o structure.o structure_dump.o susceptibility.o time.o update_eh.o mpb.o update_pols.o vec.o step_generic.o step_generic_stride1.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: aarch64-linux-gnu-ranlib .libs/libmeep.a libtool: link: ( cd ".libs" && rm -f "libmeep.la" && ln -s "../libmeep.la" "libmeep.la" ) make[4]: Leaving directory '/build/meep-1.7.0/src' make[3]: Leaving directory '/build/meep-1.7.0/src' Making all in tests make[3]: Entering directory '/build/meep-1.7.0/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meep-1.7.0/tests' Making all in scheme make[3]: Entering directory '/build/meep-1.7.0/scheme' gen-ctl-io --cxx --header -o ctl-io.h meep.scm /usr/share/libctl gen-ctl-io --cxx --swig -o ctl-io.i meep.scm /usr/share/libctl (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; perl -pe 's/^ *class +([A-Za-z_0-9:]*)( *| *:[^{]*){.*$/%rename(meep_\1) meep::\1;/' ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | grep "%rename" | sort -u; echo; grep -hv typedef ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/(inline|const|extern|static) +//g' | perl -pe 's/^[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%rename(meep_\1) meep::\1;/' | grep "%rename" | sort -u; ) > meep_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; for f in ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp; do egrep "^enum" $f | perl -pe 's/enum +([A-Za-z_0-9:]+).*$/\1/g' | while read enum; do cat $f | tr -d '\n' | perl -pe 's/.*enum +'${enum}' *{([^}]*)}.*/\1/g' | perl -pe 's/= *[0-9]+//g' |tr -d ' \t' | tr ',' '\n' | perl -pe 's/^(.*)$/'"%rename(meep_${enum}_\1) meep::\1;/g"; echo; done; done;) > meep_enum_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; grep -h friend ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/^ *friend +[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%ignore \1;/' | grep "%ignore" | sort -u;) > meep_swig_bug_workaround.i Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.30), passed through in regex; marked by <-- HERE in m/^ *class +([A-Za-z_0-9:]*)( *| *:[^{]*){ <-- HERE .*$/ at -e line 1. (perl -pe 's/%rename\(([A-Za-z0-9_]*)\) *([A-Za-z0-9:_]*);$/(define \2 (\1))/' meep_enum_renames.i | perl -pe 's/[A-Za-z0-9:_]*:://g' | perl -pe 's/_/-/g' | perl -pe 's,//,;,'; echo "(define Centered Dielectric)") > meep-enums.scm ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i cp -f /usr/share/libctl/base/main.c main.cpp cp -f /usr/share/libctl/utils/geom.c geom.cpp gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" patch -p0 meep_wrap.cxx < ./meep_wrap.patch patching file meep_wrap.cxx Hunk #1 succeeded at 778 (offset 27 lines). sed -i.bak '/(SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob))/ s/swig_collectable_tag, smob)/swig_collectable_tag, smob) || SCM_SMOB_PREDICATE((swig_collectable_tag \& ~0xff00), (smob))/' meep_wrap.cxx; make all-am make[4]: Entering directory '/build/meep-1.7.0/scheme' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.7.0, Copyright (C) 2005-2018 Massachusetts Insitute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep.o `test -f 'meep.cpp' || echo './'`meep.cpp aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.7.0, Copyright (C) 2005-2018 Massachusetts Insitute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-structure.o `test -f 'structure.cpp' || echo './'`structure.cpp aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.7.0, Copyright (C) 2005-2018 Massachusetts Insitute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-meep_wrap.o `test -f 'meep_wrap.cxx' || echo './'`meep_wrap.cxx aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.7.0, Copyright (C) 2005-2018 Massachusetts Insitute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-main.o `test -f 'main.cpp' || echo './'`main.cpp aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.7.0, Copyright (C) 2005-2018 Massachusetts Insitute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-geom.o `test -f 'geom.cpp' || echo './'`geom.cpp aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.7.0, Copyright (C) 2005-2018 Massachusetts Insitute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp In file included from ctl-io.h:7, from ctl-io.cpp:7: ctl-io.cpp: In function 'void ctlio::export_external_functions()': ctl-io.cpp:1920:50: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure("square-basis-aux", (SCM (*)()) square_basis_aux, 2, 0, 0); ^~~~~~~~~~~~~~~~ ctl-io.cpp:1921:63: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure("range-overlap-with-object-aux", (SCM (*)()) range_overlap_with_object_aux, 5, 0, 0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:1922:67: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure("display-geometric-object-info-aux", (SCM (*)()) display_geometric_object_info_aux, 2, 0, 0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:1923:63: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure("point-in-periodic-object?-aux", (SCM (*)()) point_in_periodic_objectp_aux, 2, 0, 0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:1924:54: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure("normal-to-object-aux", (SCM (*)()) normal_to_object_aux, 2, 0, 0); ^~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:1925:54: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure("point-in-object?-aux", (SCM (*)()) point_in_objectp_aux, 2, 0, 0); ^~~~~~~~~~~~~~~~~~~~ main.cpp: In function 'char* make_name(const char*, const char*)': main.cpp:140:8: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (ndir > 5 && !strcmp(".libs", dir+ndir-5)) ^~ main.cpp:142:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' strcpy(base0, for_base); base = basename(base0); ^~~~~~ In file included from ctl-io.h:7, from main.cpp:37: main.cpp: In function 'void main_entry(void*, int, char**)': main.cpp:202:48: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] gh_new_procedure ("subplex", (SCM (*)(void)) subplex_scm, 7, 0, 0); ^~~~~~~~~~~ main.cpp:212:23: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] (SCM (*)(void)) adaptive_integration_scm, 6, 0, 0); ^~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:216:23: warning: cast between incompatible function types from 'scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)' {aka 'scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)'} to 'scm_unused_struct* (*)()' [-Wcast-function-type] (SCM (*)(void)) cadaptive_integration_scm, 6, 0, 0); ^~~~~~~~~~~~~~~~~~~~~~~~~ geom.cpp: In function 'boolean point_in_fixed_pobjectp(vector3, ctlio::geometric_object*)': geom.cpp:320:7: warning: this statement may fall through [-Wimplicit-fallthrough=] } ^ geom.cpp:322:3: note: here case GEOM PRISM: ^~~~ geom.cpp: In function 'vector3 normal_to_fixed_object(vector3, ctlio::geometric_object)': geom.cpp:481:7: warning: this statement may fall through [-Wimplicit-fallthrough=] } // switch ^ geom.cpp:483:3: note: here case GEOM PRISM: ^~~~ geom.cpp: In function 'int intersect_line_with_object(vector3, vector3, ctlio::geometric_object, double*)': geom.cpp:909:8: warning: this statement may fall through [-Wimplicit-fallthrough=] } ^ geom.cpp:912:3: note: here default: ^~~~~~~ meep_wrap.cxx: In function 'scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_0(int, scm_unused_struct**)': meep_wrap.cxx:29774:54: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] arg1 = (meep::component const) scm_to_int(argv[0]); ^ meep_wrap.cxx:29777:54: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] arg2 = (meep::component const) scm_to_int(argv[1]); ^ /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-2.2 -lgc -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/.libs/libmeep.so -lctl -lguile-2.2 -lgc -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-1.7.0/scheme' make[3]: Leaving directory '/build/meep-1.7.0/scheme' Making all in libmeepgeom make[3]: Entering directory '/build/meep-1.7.0/libmeepgeom' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o bend-flux-ll.o bend-flux-ll.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o meepgeom.lo meepgeom.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o .libs/GDSIIgeom.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o .libs/meepgeom.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 meepgeom.cpp: In member function 'void meep_geom::geom_epsilon::eff_chi1inv_matrix(meep::component, meep_geom::symmetric_matrix*, const meep::volume&, double, int)': meepgeom.cpp:747:16: warning: 'mat1' may be used uninitialized in this function [-Wmaybe-uninitialized] mat_behind = mat1; ~~~~~~~~~~~^~~~~~ meepgeom.cpp:659:17: note: 'mat1' was declared here material_type mat1, mat2; ^~~~ meepgeom.cpp:714:42: warning: 'mat2' may be used uninitialized in this function [-Wmaybe-uninitialized] (id2 == id || material_type_equal(mat2,mat)))) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ meepgeom.cpp:659:23: note: 'mat2' was declared here material_type mat1, mat2; ^~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meepgeom.cpp -fPIC -DPIC -o meepgeom.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o libmeepgeom.la -rpath /usr/lib/aarch64-linux-gnu meepgeom.lo GDSIIgeom.lo ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/meepgeom.o .libs/GDSIIgeom.o -Wl,-rpath -Wl,/build/meep-1.7.0/src/.libs ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libmeepgeom.so.12 -o .libs/libmeepgeom.so.12.0.0 libtool: link: (cd ".libs" && rm -f "libmeepgeom.so.12" && ln -s "libmeepgeom.so.12.0.0" "libmeepgeom.so.12") libtool: link: (cd ".libs" && rm -f "libmeepgeom.so" && ln -s "libmeepgeom.so.12.0.0" "libmeepgeom.so") libtool: link: aarch64-linux-gnu-ar cru .libs/libmeepgeom.a meepgeom.o GDSIIgeom.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: aarch64-linux-gnu-ranlib .libs/libmeepgeom.a libtool: link: ( cd ".libs" && rm -f "libmeepgeom.la" && ln -s "../libmeepgeom.la" "libmeepgeom.la" ) /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o bend-flux-ll bend-flux-ll.o libmeepgeom.la -lctlgeom ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/bend-flux-ll bend-flux-ll.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm make[3]: Leaving directory '/build/meep-1.7.0/libmeepgeom' Making all in libpympb make[3]: Entering directory '/build/meep-1.7.0/libpympb' /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wfatal-errors -I../libmeepgeom -I../src -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o libpympb_la-pympb.lo `test -f 'pympb.cpp' || echo './'`pympb.cpp libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wfatal-errors -I../libmeepgeom -I../src -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c pympb.cpp -fPIC -DPIC -o .libs/libpympb_la-pympb.o pympb.cpp: In member function 'int py_mpb::mode_solver::mean_epsilon(symmetric_matrix*, symmetric_matrix*, mpb_real*, mpb_real, mpb_real, mpb_real, mpb_real, const mpb_real*)': pympb.cpp:379:73: warning: 'mat2' may be used uninitialized in this function [-Wmaybe-uninitialized] !(id2 < id1 && (id2 == id || meep_geom::material_type_equal(mat2, mat)))) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ pympb.cpp:378:73: warning: 'mat1' may be used uninitialized in this function [-Wmaybe-uninitialized] else if (!(id1 < id2 && (id1 == id || meep_geom::material_type_equal(mat1, mat))) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wfatal-errors -I../libmeepgeom -I../src -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c pympb.cpp -fPIC -DPIC -o libpympb_la-pympb.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o libpympb.la -rpath /usr/lib/aarch64-linux-gnu libpympb_la-pympb.lo ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/libpympb_la-pympb.o -Wl,-rpath -Wl,/build/meep-1.7.0/src/.libs ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libpympb.so.12 -o .libs/libpympb.so.12.0.0 libtool: link: (cd ".libs" && rm -f "libpympb.so.12" && ln -s "libpympb.so.12.0.0" "libpympb.so.12") libtool: link: (cd ".libs" && rm -f "libpympb.so" && ln -s "libpympb.so.12.0.0" "libpympb.so") libtool: link: aarch64-linux-gnu-ar cru .libs/libpympb.a libpympb_la-pympb.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: aarch64-linux-gnu-ranlib .libs/libpympb.a libtool: link: ( cd ".libs" && rm -f "libpympb.la" && ln -s "../libpympb.la" "libpympb.la" ) make[3]: Leaving directory '/build/meep-1.7.0/libpympb' Making all in python make[3]: Entering directory '/build/meep-1.7.0/python' swig -Wextra -I../src -I../libmeepgeom -I../libpympb -I.. -outdir . -c++ -python -o meep-python.cpp ./meep.i swig -Wextra -I../src -I../libmeepgeom -I../libpympb -I.. -I../libpympb -outdir . -c++ -python -o mpb-python.cpp ./mpb.i /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi make all-am make[4]: Entering directory '/build/meep-1.7.0/python' /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I../src -I../libmeepgeom -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cpp' || echo './'`meep-python.cpp /bin/bash ../libtool --tag=CXX --mode=compile aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I../src -I../libmeepgeom -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o _mpb_la-mpb-python.lo `test -f 'mpb-python.cpp' || echo './'`mpb-python.cpp /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I../src -I../libmeepgeom -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cpp -fPIC -DPIC -o .libs/_meep_la-meep-python.o libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I../src -I../libmeepgeom -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb-python.cpp -fPIC -DPIC -o .libs/_mpb_la-mpb-python.o meep-python.cpp: In function 'PyObject* _wrap_abort__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cpp:18169:103: warning: unused parameter 'varargs' [-Wunused-parameter] SWIGINTERN PyObject *_wrap_abort__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { ~~~~~~~~~~^~~~~~~ meep-python.cpp: In function 'PyObject* _wrap_master_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cpp:82506:111: warning: unused parameter 'varargs' [-Wunused-parameter] SWIGINTERN PyObject *_wrap_master_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { ~~~~~~~~~~^~~~~~~ meep-python.cpp: In function 'PyObject* _wrap_debug_printf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cpp:82545:110: warning: unused parameter 'varargs' [-Wunused-parameter] SWIGINTERN PyObject *_wrap_debug_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { ~~~~~~~~~~^~~~~~~ meep-python.cpp: In function 'PyObject* _wrap_master_fprintf__varargs__(PyObject*, PyObject*, PyObject*)': meep-python.cpp:82584:112: warning: unused parameter 'varargs' [-Wunused-parameter] SWIGINTERN PyObject *_wrap_master_fprintf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { ~~~~~~~~~~^~~~~~~ libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I../src -I../libmeepgeom -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c mpb-python.cpp -fPIC -DPIC -o _mpb_la-mpb-python.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o _mpb.la -rpath /usr/lib/python2.7/dist-packages/meep/mpb _mpb_la-mpb-python.lo ../libmeepgeom/libmeepgeom.la ../libpympb/libpympb.la -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/_mpb_la-mpb-python.o -Wl,-rpath -Wl,/build/meep-1.7.0/libmeepgeom/.libs -Wl,-rpath -Wl,/build/meep-1.7.0/libpympb/.libs ../libmeepgeom/.libs/libmeepgeom.so ../libpympb/.libs/libpympb.so -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_mpb.so.12 -o .libs/_mpb.so.12.0.0 libtool: link: (cd ".libs" && rm -f "_mpb.so.12" && ln -s "_mpb.so.12.0.0" "_mpb.so.12") libtool: link: (cd ".libs" && rm -f "_mpb.so" && ln -s "_mpb.so.12.0.0" "_mpb.so") libtool: link: aarch64-linux-gnu-ar cru .libs/_mpb.a _mpb_la-mpb-python.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: aarch64-linux-gnu-ranlib .libs/_mpb.a libtool: link: ( cd ".libs" && rm -f "_mpb.la" && ln -s "../_mpb.la" "_mpb.la" ) libtool: compile: aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I/usr/lib/python2.7/dist-packages/numpy/core/include -I../src -I../libmeepgeom -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c meep-python.cpp -fPIC -DPIC -o _meep_la-meep-python.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o _meep.la -rpath /usr/lib/python2.7/dist-packages/meep _meep_la-meep-python.lo ../src/libmeep.la ../libmeepgeom/libmeepgeom.la -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/_meep_la-meep-python.o -Wl,-rpath -Wl,/build/meep-1.7.0/src/.libs -Wl,-rpath -Wl,/build/meep-1.7.0/libmeepgeom/.libs ../src/.libs/libmeep.so ../libmeepgeom/.libs/libmeepgeom.so -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_meep.so.12 -o .libs/_meep.so.12.0.0 libtool: link: (cd ".libs" && rm -f "_meep.so.12" && ln -s "_meep.so.12.0.0" "_meep.so.12") libtool: link: (cd ".libs" && rm -f "_meep.so" && ln -s "_meep.so.12.0.0" "_meep.so") libtool: link: aarch64-linux-gnu-ar cru .libs/_meep.a _meep_la-meep-python.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: aarch64-linux-gnu-ranlib .libs/_meep.a libtool: link: ( cd ".libs" && rm -f "_meep.la" && ln -s "../_meep.la" "_meep.la" ) mkdir -p meep cp __init__.py ./geom.py ./simulation.py ./source.py ./materials.py .libs/_meep.so meep mkdir -p meep/mpb cp .libs/_mpb.so meep/mpb cp ./mpb.py meep/mpb/__init__.py cp ./solver.py ./mpb_data.py meep/mpb make[4]: Leaving directory '/build/meep-1.7.0/python' make[3]: Leaving directory '/build/meep-1.7.0/python' make[3]: Entering directory '/build/meep-1.7.0' cp -f ./meep-pkgconfig meep.pc make[3]: Leaving directory '/build/meep-1.7.0' make[2]: Leaving directory '/build/meep-1.7.0' make[1]: Leaving directory '/build/meep-1.7.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/meep-1.7.0' find . ./meep.pc ./libtool ./stamp-h1 ./config.h ./meep-pkgconfig ./Makefile ./config.status ./config.log ./test-driver ./depcomp ./py-compile ./Makefile.in ./missing ./install-sh ./config.sub ./config.guess ./compile ./config.h.in ./configure ./aclocal.m4 ./ltmain.sh ./autom4te.cache ./autom4te.cache/output.1 ./autom4te.cache/traces.1 ./autom4te.cache/output.2 ./autom4te.cache/traces.2 ./autom4te.cache/output.0 ./autom4te.cache/traces.0 ./autom4te.cache/requests ./.pc ./.pc/libgeom-fix-include.patch ./.pc/libgeom-fix-include.patch/libpympb ./.pc/libgeom-fix-include.patch/libpympb/pympb.cpp ./.pc/fix-test.patch ./.pc/fix-test.patch/python ./.pc/fix-test.patch/python/simulation.py ./.pc/c++14.patch ./.pc/c++14.patch/libmeepgeom ./.pc/c++14.patch/libmeepgeom/ring-ll.cpp ./.pc/applied-patches ./.pc/.quilt_series ./.pc/.quilt_patches ./.pc/.version ./debian ./debian/autoreconf.after ./debian/autoreconf.before ./debian/watch ./debian/source ./debian/source/lintian-overrides ./debian/source/format ./debian/rules ./debian/python-meep.prerm ./debian/python-meep.postinst ./debian/python-meep.install ./debian/patches ./debian/patches/spelling.patch ./debian/patches/series ./debian/patches/meep-suffix.patch ./debian/patches/libgeom-fix-include.patch ./debian/patches/fix-test.patch ./debian/patches/c++14.patch ./debian/missing-sources ./debian/missing-sources/modernizr-2.8.3.js ./debian/missing-sources/jquery-2.1.1.js ./debian/missing-sources/highlight.js ./debian/meep.manpages ./debian/meep.install ./debian/meep.docs ./debian/meep.1 ./debian/libmeep12.lintian-overrides ./debian/libmeep12.install ./debian/libmeep-dev.install ./debian/docs ./debian/copyright ./debian/control ./debian/compat ./debian/changelog ./tests ./tests/Makefile ./tests/Makefile.in ./tests/two_dimensional.cpp ./tests/three_d.cpp ./tests/symmetry.cpp ./tests/stress_tensor.cpp ./tests/pml.cpp ./tests/physical.cpp ./tests/one_dimensional.cpp ./tests/near2far.cpp ./tests/known_results.cpp ./tests/integrate.cpp ./tests/harmonics.cpp ./tests/h5test.cpp ./tests/flux.cpp ./tests/cylindrical.cpp ./tests/convergence_cyl_waveguide.cpp ./tests/bragg_transmission.cpp ./tests/bench.cpp ./tests/aniso_disp.cpp ./tests/Makefile.am ./tests/2D_convergence.cpp ./src ./src/libmeep.la ./src/step_generic_stride1.lo ./src/step_generic.lo ./src/step_generic_stride1.o ./src/step_generic.o ./src/structure.lo ./src/structure.o ./src/vec.lo ./src/vec.o ./src/mpb.lo ./src/mpb.o ./src/update_eh.lo ./src/update_pols.lo ./src/update_eh.o ./src/update_pols.o ./src/susceptibility.lo ./src/susceptibility.o ./src/step_db.lo ./src/step_db.o ./src/structure_dump.lo ./src/structure_dump.o ./src/sources.lo ./src/sources.o ./src/time.lo ./src/time.o ./src/stress.lo ./src/stress.o ./src/step.lo ./src/step.o ./src/near2far.lo ./src/near2far.o ./src/multilevel-atom.lo ./src/multilevel-atom.o ./src/integrate2.lo ./src/integrate2.o ./src/monitor.lo ./src/monitor.o ./src/random.lo ./src/random.o ./src/output_directory.lo ./src/output_directory.o ./src/integrate.lo ./src/integrate.o 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./src/stress.cpp ./src/step_generic.cpp ./src/step_db.cpp ./src/step.cpp ./src/sphere-quad.cpp ./src/sources.cpp ./src/random.cpp ./src/output_directory.cpp ./src/near2far.cpp ./src/mympi.cpp ./src/multilevel-atom.cpp ./src/mpb.cpp ./src/monitor.cpp ./src/meep_internals.hpp ./src/meep ./src/meep/vec.hpp ./src/meep/mympi.hpp ./src/meep.hpp ./src/loop_in_chunks.cpp ./src/integrate2.cpp ./src/integrate.cpp ./src/initialize.cpp ./src/h5file.cpp ./src/h5fields.cpp ./src/fields.cpp ./src/energy_and_flux.cpp ./src/dft_ldos.cpp ./src/dft.cpp ./src/cw_fields.cpp ./src/control_c.cpp ./src/casimir.cpp ./src/boundaries.cpp ./src/bicgstab.hpp ./src/bicgstab.cpp ./src/bands.cpp ./src/array_slice.cpp ./src/anisotropic_averaging.cpp ./src/Makefile.am ./scheme ./scheme/meep ./scheme/.libs ./scheme/.libs/meep ./scheme/meep-meep_wrap.o ./scheme/meep-structure.o ./scheme/meep-geom.o ./scheme/meep-ctl-io.o ./scheme/meep-meep.o ./scheme/meep-main.o ./scheme/meep_wrap.cxx ./scheme/meep_wrap.cxx.bak ./scheme/meep_wrap.cxx.orig ./scheme/ctl-io.cpp ./scheme/geom.cpp ./scheme/main.cpp ./scheme/meep-enums.scm ./scheme/meep_swig_bug_workaround.i ./scheme/meep_enum_renames.i ./scheme/ctl-io.i ./scheme/meep_renames.i ./scheme/ctl-io.h ./scheme/meep.scm ./scheme/Makefile ./scheme/Makefile.in ./scheme/structure.cpp ./scheme/meep_wrap.patch ./scheme/meep_op_renames.i ./scheme/meep.scm.in ./scheme/meep.i ./scheme/meep.cpp ./scheme/meep-ctl.hpp ./scheme/meep-ctl-swig.hpp ./scheme/meep-ctl-const.hpp ./scheme/materials.scm ./scheme/examples ./scheme/examples/wvg_src.ctl ./scheme/examples/solve-cw.ctl ./scheme/examples/ring.ctl ./scheme/examples/ring-cyl.ctl ./scheme/examples/refl-quartz.ctl ./scheme/examples/refl-angular.ctl ./scheme/examples/pw-source.ctl ./scheme/examples/parallel-wvgs-mpb.ctl ./scheme/examples/parallel-wvgs-force.ctl ./scheme/examples/multilevel-atom.ctl ./scheme/examples/mode-coeffs.ctl ./scheme/examples/metal-cavity-ldos.ctl ./scheme/examples/material-dispersion.ctl 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./python/.libs/_mpb.a ./python/.libs/_mpb.so ./python/.libs/_mpb.so.12 ./python/.libs/_mpb.so.12.0.0 ./python/.libs/_mpb_la-mpb-python.o ./python/mpb.py ./python/mpb.py.bak ./python/__init__.py ./python/__init__.py.bak ./python/mpb-python.cpp ./python/meep.py ./python/meep-python.cpp ./python/Makefile ./python/Makefile.in ./python/simulation.py ./python/vec.i ./python/typemap_utils.cpp ./python/tests ./python/tests/wvg_src.py ./python/tests/utils.py ./python/tests/user_defined_material.py ./python/tests/source.py ./python/tests/simulation.py ./python/tests/ring_cyl.py ./python/tests/ring.py ./python/tests/refl_angular.py ./python/tests/pw_source.py ./python/tests/physical.py ./python/tests/multilevel_atom.py ./python/tests/mpb.py ./python/tests/mode_decomposition.py ./python/tests/mode_coeffs.py ./python/tests/material_dispersion.py ./python/tests/ldos.py ./python/tests/kdom.py ./python/tests/holey_wvg_cavity.py ./python/tests/holey_wvg_bands.py ./python/tests/geom.py ./python/tests/fragment_stats.py ./python/tests/force.py ./python/tests/field_functions.py ./python/tests/dft_fields.py ./python/tests/data ./python/tests/data/tutorial-tot.rpwr.k16.b08.te.h5 ./python/tests/data/tutorial-te-eigenvectors.h5 ./python/tests/data/tutorial-te-eigenvectors-8-1.h5 ./python/tests/data/tutorial-te-eigenvectors-3-3.h5 ./python/tests/data/tutorial-mu.h5 ./python/tests/data/tutorial-h.k16.b08.te.h5 ./python/tests/data/tutorial-flux.v.k11.b08.te.h5 ./python/tests/data/tutorial-epsilon.h5 ./python/tests/data/tutorial-e.k16.b08.z.tm.h5 ./python/tests/data/tutorial-e.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b08.te.h5 ./python/tests/data/tutorial-d.k16.b02.te.h5 ./python/tests/data/tutorial-d.k01.b02.te.h5 ./python/tests/data/tutorial-b.k16.b08.te.h5 ./python/tests/data/tutorial-C.k16.b08.te.h5 ./python/tests/data/tri-rods-epsilon-r-m3-n32.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm.h5 ./python/tests/data/tri-rods-e.k11.b08.z.tm-r-m3-n32.h5 ./python/tests/data/subpixel_avg-epsilon.h5 ./python/tests/data/strip-flux.v.k01.b04.x.h5 ./python/tests/data/line-defect-e.k04.b12.z.tm.h5 ./python/tests/data/hole-slab-h.k01.b09.z.zeven.h5 ./python/tests/data/eps_input_file_test.h5 ./python/tests/data/diamond-dpwr.k06.b05.h5 ./python/tests/data/converted-tri-rods-e.k11.b08.tm.h5 ./python/tests/data/converted-diamond-dpwr.k06.b05.h5 ./python/tests/data/cavity_arrayslice_2d.npy ./python/tests/data/cavity_arrayslice_1d.npy ./python/tests/data/bragg-h.k01.b08.y.tm.h5 ./python/tests/data/bend-flux.gds ./python/tests/data/amp_func_file.h5 ./python/tests/cyl_ellipsoid.py ./python/tests/chunks.py ./python/tests/cavity_arrayslice.py ./python/tests/binary_grating.py ./python/tests/bend_flux.py ./python/tests/antenna_radiation.py ./python/tests/absorber_1d.py ./python/tests/3rd_harm_1d.py ./python/source.py ./python/solver.py ./python/numpy.i ./python/mpb_data.py ./python/mpb.i ./python/meep.i ./python/materials.py ./python/geom.py ./python/examples ./python/examples/wvg-src.py ./python/examples/solve-cw.py ./python/examples/ring.py ./python/examples/ring-mode-overlap.py ./python/examples/ring-cyl.py ./python/examples/refl-quartz.py ./python/examples/refl-angular.py ./python/examples/pw-source.py ./python/examples/parallel-wvgs-mpb.py ./python/examples/parallel-wvgs-force.py ./python/examples/multilevel-atom.py ./python/examples/mpb_tutorial.py ./python/examples/mpb_tri_rods.py ./python/examples/mpb_tri_holes.py ./python/examples/mpb_strip.py ./python/examples/mpb_sq_rods.py ./python/examples/mpb_line_defect.py ./python/examples/mpb_honey_rods.py ./python/examples/mpb_hole_slab.py ./python/examples/mpb_diamond.py ./python/examples/mpb_data_analysis.py ./python/examples/mpb_bragg_sine.py ./python/examples/mpb_bragg.py ./python/examples/mode-decomposition.py ./python/examples/metal-cavity-ldos.py ./python/examples/material-dispersion.py ./python/examples/holey-wvg-cavity.py ./python/examples/holey-wvg-bands.py ./python/examples/cyl-ellipsoid.py ./python/examples/coupler.py ./python/examples/coupler.gds ./python/examples/cavity_arrayslice.py ./python/examples/cavity-farfield.py ./python/examples/binary_grating_oblique.py ./python/examples/binary_grating.py ./python/examples/bend-flux.py ./python/examples/antenna-radiation.py ./python/examples/absorber-1d.py ./python/examples/3rd-harm-1d.py ./python/Makefile.am ./mkdocs.yml ./meep-pkgconfig.in ./m4 ./m4/lt~obsolete.m4 ./m4/ltversion.m4 ./m4/ltsugar.m4 ./m4/ltoptions.m4 ./m4/libtool.m4 ./m4/pkg.m4 ./m4/ax_gcc_x86_cpuid.m4 ./m4/ax_gcc_archflag.m4 ./m4/ax_cxx_maxopt.m4 ./m4/ax_compiler_vendor.m4 ./m4/ax_check_compiler_flags.m4 ./m4/acx_mpi.m4 ./m4/acx_lapack.m4 ./m4/acx_blas.m4 ./libpympb ./libpympb/libpympb.la ./libpympb/libpympb_la-pympb.lo ./libpympb/libpympb_la-pympb.o ./libpympb/.libs ./libpympb/.libs/libpympb.la ./libpympb/.libs/libpympb.lai ./libpympb/.libs/libpympb.a ./libpympb/.libs/libpympb.so ./libpympb/.libs/libpympb.so.12 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./doc/docs/FAQ.md ./doc/docs/Exploiting_Symmetry.md ./doc/docs/Download.md ./doc/docs/Developer_Codes ./doc/docs/Developer_Codes/WriteChunkInfo.cpp ./doc/docs/Developer_Codes/Makefile.manual ./doc/docs/Cylindrical_Coordinates.md ./doc/docs/Chunks_and_Symmetry.md ./doc/docs/C++_Tutorial.md ./doc/docs/C++_Developer_Information.md ./doc/docs/Build_From_Source.md ./doc/docs/Acknowledgements.md ./doc/README ./configure.ac ./codemeta.json ./autogen.sh ./TODO ./README.md ./NEWS.md ./Makefile.am ./LICENSE ./COPYRIGHT ./AUTHORS ./.travis.yml ./.mailmap ./.gitignore echo arm64 arm64 #if [ "arm64" = "armel" ] || \ # [ "arm64" = "mips" ] || \ # [ "arm64" = "mipsel" ] || \ # [ "arm64" = "powerpc" ] || \ # [ "arm64" = "sparc" ] ; then \ # echo "Do not make tests on this architecture" ;\ #else \ # echo "Do make tests on this architecture" ;\ # make check; \ # find; \ # cat python/test-suite.log; \ #fi # check whether testsuite runs everywhere make check; \ cat python/test-suite.log make[2]: Entering directory '/build/meep-1.7.0' Making check in src make[3]: Entering directory '/build/meep-1.7.0/src' make check-am make[4]: Entering directory '/build/meep-1.7.0/src' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/meep-1.7.0/src' make[3]: Leaving directory '/build/meep-1.7.0/src' Making check in tests make[3]: Entering directory '/build/meep-1.7.0/tests' make aniso_disp bench bragg_transmission convergence_cyl_waveguide cylindrical flux harmonics integrate known_results near2far one_dimensional physical stress_tensor symmetry three_d two_dimensional 2D_convergence h5test pml make[4]: Entering directory '/build/meep-1.7.0/tests' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o aniso_disp.o aniso_disp.cpp /bin/bash ../libtool --tag=CXX 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/usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o pml.o pml.cpp pml.cpp: In function 'int check_pmlcyl(double (*)(const meep::vec&))': pml.cpp:220:10: warning: variable 'prev_refl_const' set but not used [-Wunused-but-set-variable] double prev_refl_const = 0.0, refl_const = 0.0; ^~~~~~~~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o pml pml.o ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/pml pml.o ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-1.7.0/tests' make check-TESTS make[4]: Entering directory '/build/meep-1.7.0/tests' make[5]: Entering directory '/build/meep-1.7.0/tests' PASS: aniso_disp PASS: bench PASS: bragg_transmission PASS: convergence_cyl_waveguide PASS: cylindrical PASS: flux PASS: harmonics PASS: integrate PASS: known_results PASS: near2far PASS: one_dimensional PASS: physical PASS: stress_tensor PASS: symmetry PASS: three_d PASS: two_dimensional PASS: 2D_convergence PASS: h5test PASS: pml ============================================================================ Testsuite summary for meep 1.7.0 ============================================================================ # TOTAL: 19 # PASS: 19 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/meep-1.7.0/tests' make[4]: Leaving directory '/build/meep-1.7.0/tests' make[3]: Leaving directory '/build/meep-1.7.0/tests' Making check in scheme make[3]: Entering directory '/build/meep-1.7.0/scheme' make check-am make[4]: Entering directory '/build/meep-1.7.0/scheme' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/meep-1.7.0/scheme' make[3]: Leaving directory '/build/meep-1.7.0/scheme' Making check in libmeepgeom make[3]: Entering directory '/build/meep-1.7.0/libmeepgeom' make pw-source-ll ring-ll cyl-ellipsoid-ll absorber-1d-ll array-slice-ll user-defined-material dft-fields gdsII-3d make[4]: Entering directory '/build/meep-1.7.0/libmeepgeom' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o pw-source-ll.o pw-source-ll.cpp /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o pw-source-ll pw-source-ll.o libmeepgeom.la -lctlgeom ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/pw-source-ll pw-source-ll.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 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-Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/ring-ll ring-ll.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o cyl-ellipsoid-ll.o cyl-ellipsoid-ll.cpp /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o cyl-ellipsoid-ll cyl-ellipsoid-ll.o libmeepgeom.la -lctlgeom ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/cyl-ellipsoid-ll cyl-ellipsoid-ll.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o absorber-1d-ll.o absorber-1d-ll.cpp /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o absorber-1d-ll absorber-1d-ll.o libmeepgeom.la -lctlgeom ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/absorber-1d-ll absorber-1d-ll.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas 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-lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/array-slice-ll array-slice-ll.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib 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-L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o dft-fields.o dft-fields.cpp /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o dft-fields dft-fields.o libmeepgeom.la -lctlgeom ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/dft-fields dft-fields.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -DDATADIR=\"./\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -c -o gdsII-3d.o gdsII-3d.cpp /bin/bash ../libtool --tag=CXX --mode=link aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o gdsII-3d gdsII-3d.o libmeepgeom.la -lctlgeom ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm libtool: link: aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o .libs/gdsII-3d gdsII-3d.o ./.libs/libmeepgeom.so -lctlgeom ../src/.libs/libmeep.so -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm make[4]: Leaving directory '/build/meep-1.7.0/libmeepgeom' make check-TESTS make[4]: Entering directory '/build/meep-1.7.0/libmeepgeom' make[5]: Entering directory '/build/meep-1.7.0/libmeepgeom' PASS: cyl-ellipsoid-ll PASS: array-slice-ll ============================================================================ Testsuite summary for meep 1.7.0 ============================================================================ # TOTAL: 2 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/meep-1.7.0/libmeepgeom' make[4]: Leaving directory '/build/meep-1.7.0/libmeepgeom' make[3]: Leaving directory '/build/meep-1.7.0/libmeepgeom' Making check in libpympb make[3]: Entering directory '/build/meep-1.7.0/libpympb' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/meep-1.7.0/libpympb' Making check in python make[3]: Entering directory '/build/meep-1.7.0/python' /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi make check-am make[4]: Entering directory '/build/meep-1.7.0/python' /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi mkdir -p meep cp __init__.py ./geom.py ./simulation.py ./source.py ./materials.py .libs/_meep.so meep mkdir -p meep/mpb cp .libs/_mpb.so meep/mpb cp ./mpb.py meep/mpb/__init__.py cp ./solver.py ./mpb_data.py meep/mpb make check-TESTS make[5]: Entering directory '/build/meep-1.7.0/python' make[6]: Entering directory '/build/meep-1.7.0/python' PASS: tests/3rd_harm_1d.py PASS: tests/absorber_1d.py PASS: tests/antenna_radiation.py PASS: tests/bend_flux.py PASS: tests/binary_grating.py PASS: tests/cavity_arrayslice.py PASS: tests/chunks.py PASS: tests/cyl_ellipsoid.py PASS: tests/dft_fields.py PASS: tests/field_functions.py PASS: tests/force.py PASS: tests/fragment_stats.py PASS: tests/geom.py PASS: tests/holey_wvg_bands.py PASS: tests/holey_wvg_cavity.py PASS: tests/kdom.py PASS: tests/ldos.py PASS: tests/material_dispersion.py FAIL: tests/mpb.py PASS: tests/mode_coeffs.py PASS: tests/mode_decomposition.py FAIL: tests/multilevel_atom.py PASS: tests/physical.py PASS: tests/pw_source.py PASS: tests/refl_angular.py PASS: tests/ring.py PASS: tests/ring_cyl.py PASS: tests/simulation.py PASS: tests/source.py PASS: tests/user_defined_material.py PASS: tests/wvg_src.py ============================================================================ Testsuite summary for meep 1.7.0 ============================================================================ # TOTAL: 31 # PASS: 29 # SKIP: 0 # XFAIL: 0 # FAIL: 2 # XPASS: 0 # ERROR: 0 ============================================================================ See python/test-suite.log Please report to meep@ab-initio.mit.edu ============================================================================ make[6]: *** [Makefile:967: test-suite.log] Error 1 make[6]: Leaving directory '/build/meep-1.7.0/python' make[5]: *** [Makefile:1075: check-TESTS] Error 2 make[5]: Leaving directory '/build/meep-1.7.0/python' make[4]: *** [Makefile:1141: check-am] Error 2 make[4]: Leaving directory '/build/meep-1.7.0/python' make[3]: *** [Makefile:1143: check] Error 2 make[3]: Leaving directory '/build/meep-1.7.0/python' make[2]: *** [Makefile:508: check-recursive] Error 1 make[2]: Leaving directory '/build/meep-1.7.0' ======================================= meep 1.7.0: python/test-suite.log ======================================= # TOTAL: 31 # PASS: 29 # SKIP: 0 # XFAIL: 0 # FAIL: 2 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 FAIL: tests/mpb =============== test_anisotropic_2d_gap ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.3, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00613403320312 solve_kpoint (0,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4, band 5, band 6, band 7, band 8 Solving for bands 3 to 8... Finished solving for bands 3 to 8 after 52 iterations. freqs:, 1, 0, 0, 0, 0, 0, 0, 0.318992, 0.365115, 0.370143, 0.370147, 0.401833, 0.401833 elapsed time for k point: 0.354885101318 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 45 iterations. freqs:, 2, 0.1, 0, 0, 0.1, 0.0367937, 0.049071, 0.308902, 0.358341, 0.370542, 0.38729, 0.392077, 0.402396 elapsed time for k point: 0.449723958969 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 44 iterations. freqs:, 3, 0.2, 0, 0, 0.2, 0.0730357, 0.0965491, 0.285819, 0.360073, 0.368932, 0.371597, 0.403894, 0.408164 elapsed time for k point: 0.43799996376 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 48 iterations. freqs:, 4, 0.3, 0, 0, 0.3, 0.107851, 0.140336, 0.25846, 0.340653, 0.367325, 0.372946, 0.405794, 0.418837 elapsed time for k point: 0.476423978806 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 39 iterations. freqs:, 5, 0.4, 0, 0, 0.4, 0.1388, 0.176103, 0.23164, 0.313843, 0.374076, 0.377706, 0.407374, 0.410603 elapsed time for k point: 0.389130115509 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 36 iterations. freqs:, 6, 0.5, 0, 0, 0.5, 0.154816, 0.192048, 0.216968, 0.300856, 0.374518, 0.385777, 0.401594, 0.407988 elapsed time for k point: 0.358995199203 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 38 iterations. freqs:, 7, 0.5, 0.1, 0, 0.509902, 0.15975, 0.195136, 0.218441, 0.305033, 0.358789, 0.391555, 0.402172, 0.402445 elapsed time for k point: 0.379256010056 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 37 iterations. freqs:, 8, 0.5, 0.2, 0, 0.538516, 0.173344, 0.203625, 0.222584, 0.316302, 0.340088, 0.36862, 0.387671, 0.424089 elapsed time for k point: 0.369344949722 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 38 iterations. freqs:, 9, 0.5, 0.3, 0, 0.583095, 0.192437, 0.215224, 0.228468, 0.323728, 0.33113, 0.341965, 0.37019, 0.4458 elapsed time for k point: 0.378744125366 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 42 iterations. freqs:, 10, 0.5, 0.4, 0, 0.640312, 0.21184, 0.226, 0.234179, 0.311757, 0.318108, 0.344193, 0.3555, 0.465942 elapsed time for k point: 0.417517900467 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 53 iterations. freqs:, 11, 0.5, 0.5, 0, 0.707107, 0.221357, 0.230619, 0.236708, 0.307149, 0.30715, 0.349538, 0.349539, 0.477307 elapsed time for k point: 0.523886919022 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 44 iterations. freqs:, 12, 0.4, 0.4, 0, 0.565685, 0.19918, 0.2202, 0.239097, 0.309959, 0.330944, 0.347653, 0.354078, 0.460272 elapsed time for k point: 0.436713933945 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. freqs:, 13, 0.3, 0.3, 0, 0.424264, 0.153826, 0.186625, 0.253882, 0.318156, 0.351842, 0.366269, 0.371004, 0.436281 elapsed time for k point: 0.339154958725 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 41 iterations. freqs:, 14, 0.2, 0.2, 0, 0.282843, 0.103673, 0.133382, 0.276682, 0.331086, 0.368234, 0.382194, 0.398022, 0.412434 elapsed time for k point: 0.409624099731 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 38 iterations. freqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0520822, 0.0690311, 0.302853, 0.347811, 0.385316, 0.389474, 0.390006, 0.396139 elapsed time for k point: 0.380347967148 solve_kpoint (0,0,0): Solving for bands 3 to 8... Finished solving for bands 3 to 8 after 40 iterations. freqs:, 16, 0, 0, 0, 0, 0, 0, 0.318992, 0.365115, 0.370143, 0.370147, 0.401833, 0.401833 .elapsed time for k point: 0.27241396904 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.2213570228 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.230619158264 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.216967769545 at Vector3<0.5, 0.0, 0.0> to 0.318992476569 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.300856483084 at Vector3<0.5, 0.0, 0.0> to 0.365115253765 at Vector3<0.0, 0.0, 0.0> Band 5 range: 0.307149834004 at Vector3<0.5, 0.5, 0.0> to 0.385316361771 at Vector3<0.1, 0.1, 0.0> Band 6 range: 0.341964725508 at Vector3<0.5, 0.3, 0.0> to 0.391554684426 at Vector3<0.5, 0.1, 0.0> Band 7 range: 0.349538537661 at Vector3<0.5, 0.5, 0.0> to 0.407373600123 at Vector3<0.4, 0.0, 0.0> Band 8 range: 0.39613882331 at Vector3<0.1, 0.1, 0.0> to 0.477306572259 at Vector3<0.5, 0.5, 0.0> total elapsed time for run: 6.38198709488 done test_anisotropic_2d_gap: 6.38s test_bragg ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 1 dimensions. Grid size is 32 x 1 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 1e+20, height 0.25, axis (1, 0, 0) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.0, 0.0> elapsed time for initialization: 0.000852108001709 solve_kpoint (0.5,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 1, 0.5, 0, 0, 0.5, 0.222451, 0.443471, 0.892368, 1.10456, 1.56579, 1.75949, 2.24248, 2.40631 elapsed time for k point: 0.00528502464294 total elapsed time for run: 0.00626111030579 done Fixing h-field (band 8) phase by 0.909548 + -0.415598i; max ampl. = 1.96664 .Outputting fields to test_bragg-h.k01.b08.y.tm.h5... test_bragg: 0.02s test_bragg_sine ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 1 dimensions. Grid size is 32 x 1 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: Geometric object tree has depth 1 and 0 object nodes (vs. 0 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 11 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.05, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.15, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.25, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.35, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.45, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> elapsed time for initialization: 0.00340390205383 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 35 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.468775, 0.546626, 0.989349, 1.02405, 1.49704, 1.51158, 1.99991 elapsed time for k point: 0.00876307487488 solve_kpoint (0.05,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 83 iterations. tmfreqs:, 2, 0.05, 0, 0, 0.05, 0.0235585, 0.461962, 0.553534, 0.976586, 1.03685, 1.4784, 1.53022, 1.97778 elapsed time for k point: 0.0242919921875 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 3, 0.1, 0, 0, 0.1, 0.047044, 0.445964, 0.569827, 0.954549, 1.059, 1.45407, 1.55459, 1.95293 elapsed time for k point: 0.00379204750061 solve_kpoint (0.15,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 4, 0.15, 0, 0, 0.15, 0.0703703, 0.426194, 0.590125, 0.931007, 1.08275, 1.42941, 1.5793, 1.92803 elapsed time for k point: 0.00356483459473 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 5, 0.2, 0, 0, 0.2, 0.0934195, 0.40505, 0.612091, 0.907101, 1.10696, 1.40468, 1.6041, 1.90311 elapsed time for k point: 0.0032958984375 solve_kpoint (0.25,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 6, 0.25, 0, 0, 0.25, 0.11601, 0.383577, 0.634793, 0.883153, 1.13136, 1.37995, 1.62894, 1.8782 elapsed time for k point: 0.0036199092865 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 7, 0.3, 0, 0, 0.3, 0.137834, 0.362445, 0.657758, 0.859352, 1.15583, 1.35526, 1.65379, 1.8533 elapsed time for k point: 0.00316905975342 solve_kpoint (0.35,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 8, 0.35, 0, 0, 0.35, 0.15832, 0.342396, 0.6806, 0.835947, 1.18029, 1.33065, 1.67864, 1.82841 elapsed time for k point: 0.00317192077637 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 8 iterations. tmfreqs:, 9, 0.4, 0, 0, 0.4, 0.176334, 0.324651, 0.702682, 0.813501, 1.20459, 1.30625, 1.70347, 1.80356 elapsed time for k point: 0.00277590751648 solve_kpoint (0.45,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 8 iterations. tmfreqs:, 10, 0.45, 0, 0, 0.45, 0.189641, 0.31149, 0.722112, 0.793866, 1.22816, 1.28262, 1.72816, 1.77885 elapsed time for k point: 0.00291991233826 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 8 iterations. tmfreqs:, 11, 0.5, 0, 0, 0.5, 0.194775, 0.306403, 0.73165, 0.784262, 1.2441, 1.26666, 1.74884, 1.75817 .elapsed time for k point: 0.00297498703003 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.194774663668 at Vector3<0.5, 0.0, 0.0> Band 2 range: 0.306403026231 at Vector3<0.5, 0.0, 0.0> to 0.468774852587 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.546625750132 at Vector3<0.0, 0.0, 0.0> to 0.731650442654 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.784261590509 at Vector3<0.5, 0.0, 0.0> to 0.989348615544 at Vector3<0.0, 0.0, 0.0> Band 5 range: 1.02405486481 at Vector3<0.0, 0.0, 0.0> to 1.2440980042 at Vector3<0.5, 0.0, 0.0> Band 6 range: 1.26665668619 at Vector3<0.5, 0.0, 0.0> to 1.4970379697 at Vector3<0.0, 0.0, 0.0> Band 7 range: 1.51158009947 at Vector3<0.0, 0.0, 0.0> to 1.74883590399 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.75816832085 at Vector3<0.5, 0.0, 0.0> to 1.99990720076 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.194774663668) to band 2 (0.306403026231), 44.5464212843% Gap from band 2 (0.468774852587) to band 3 (0.546625750132), 15.3340262625% Gap from band 3 (0.731650442654) to band 4 (0.784261590509), 6.94118744416% Gap from band 4 (0.989348615544) to band 5 (1.02405486481), 3.44752054018% Gap from band 5 (1.2440980042) to band 6 (1.26665668619), 1.79696424101% Gap from band 6 (1.4970379697) to band 7 (1.51158009947), 0.966698293647% Gap from band 7 (1.74883590399) to band 8 (1.75816832085), 0.532215889061% total elapsed time for run: 0.0668969154358 done test_bragg_sine: 0.07s test_compute_field_energy ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00536799430847 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412755966187 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19808602333 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265013933182 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244373083115 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283810138702 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402308940887 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332940816879 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284988880157 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244585990906 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234684944153 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.23278594017 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.185070037842 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214517831802 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.29344701767 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344037055969 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.729407072067 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.90977597237 done D-energy-components:, 16, 8, 0.499991, 0.500009, 0 .test_compute_field_energy: 5.91s test_compute_group_velocity ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.0053699016571 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412157058716 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19822597504 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265164852142 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244540929794 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283971071243 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402055025101 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332966089249 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.285044908524 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244398832321 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234909057617 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232841968536 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18497800827 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214495897293 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293502092361 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344153881073 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 .elapsed time for k point: 0.729044914246 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.90958881378 done test_compute_group_velocity: 5.91s test_compute_integrals ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00532007217407 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412156820297 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19872808456 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.26523900032 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244577169418 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283975124359 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402292966843 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.333237171173 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284861087799 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244275093079 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.23496389389 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232955932617 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184996843338 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214609146118 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293658018112 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344097137451 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.729027986526 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.91054487228 done Fixing h-field (band 8) phase by 1 + -2.58685e-07i; max ampl. = 4.48388 H-energy-components:, 16, 8, 0, 0, 1 Fixing e-field (band 8) phase by 6.12323e-17 + -1i; max ampl. = 1.10099 .test_compute_integrals: 5.93s test_diamond ======================== Initializing eigensolver data Computing 5 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 16 x 16 x 16. Solving for 5 bands at a time. Creating Maxwell data... Mesh size is 5. Lattice vectors: (0, 0.5, 0.5) (0.5, 0, 0.5) (0.5, 0.5, 0) Cell volume = 0.25 Reciprocal lattice vectors (/ 2 pi): (-1, 1, 1) (1, -1, 1) (1, 1, -1) Geometric objects: sphere, center = (0.125,0.125,0.125) radius 0.25 sphere, center = (-0.125,-0.125,-0.125) radius 0.25 Geometric object tree has depth 4 and 35 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 31 k-points Vector3<0.0, 0.5, 0.5> Vector3<0.0, 0.525, 0.475> Vector3<0.0, 0.55, 0.45> Vector3<0.0, 0.575, 0.425> Vector3<0.0, 0.6, 0.4> Vector3<0.0, 0.625, 0.375> Vector3<0.0, 0.6, 0.3> Vector3<0.0, 0.575, 0.225> Vector3<0.0, 0.55, 0.15> Vector3<0.0, 0.525, 0.075> Vector3<0.0, 0.5, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.1> Vector3<0.0, 0.2, 0.2> Vector3<0.0, 0.3, 0.3> Vector3<0.0, 0.4, 0.4> Vector3<0.0, 0.5, 0.5> Vector3<0.05, 0.55, 0.5> Vector3<0.1, 0.6, 0.5> Vector3<0.15, 0.65, 0.5> Vector3<0.2, 0.7, 0.5> Vector3<0.25, 0.75, 0.5> Vector3<0.275, 0.75, 0.475> Vector3<0.3, 0.75, 0.45> Vector3<0.325, 0.75, 0.425> Vector3<0.35, 0.75, 0.4> Vector3<0.375, 0.75, 0.375> elapsed time for initialization: 0.0657839775085 solve_kpoint (0,0.5,0.5): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4, band 5 Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 54 iterations. freqs:, 1, 0, 0.5, 0.5, 1, 0.38015, 0.381243, 0.495263, 0.496788, 0.541208 elapsed time for k point: 1.31705021858 solve_kpoint (0,0.525,0.475): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 34 iterations. freqs:, 2, 0, 0.525, 0.475, 1.0025, 0.380386, 0.382168, 0.495624, 0.497176, 0.537208 elapsed time for k point: 0.835192918777 solve_kpoint (0,0.55,0.45): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 30 iterations. freqs:, 3, 0, 0.55, 0.45, 1.00995, 0.380966, 0.38483, 0.496711, 0.498342, 0.526501 elapsed time for k point: 0.73913693428 solve_kpoint (0,0.575,0.425): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 29 iterations. freqs:, 4, 0, 0.575, 0.425, 1.02225, 0.381461, 0.388864, 0.498536, 0.500287, 0.511601 elapsed time for k point: 0.715970039368 solve_kpoint (0,0.6,0.4): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 28 iterations. freqs:, 5, 0, 0.6, 0.4, 1.03923, 0.381077, 0.393446, 0.49495, 0.501109, 0.503014 elapsed time for k point: 0.691428184509 solve_kpoint (0,0.625,0.375): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 45 iterations. freqs:, 6, 0, 0.625, 0.375, 1.06066, 0.378621, 0.396729, 0.479263, 0.504432, 0.506514 elapsed time for k point: 1.10193800926 Fixing d-field (band 1) phase by 0.997721 + 0.0674729i; max ampl. = 12.9762 D-energy-components:, 6, 1, 0.0477669, 0.476092, 0.476141 Outputting test_diamond-dpwr.k06.b01.h5... D-energy-components:, 6, 1, 0.0477669, 0.476092, 0.476141 Fixing d-field (band 2) phase by 0.997721 + 0.0674729i; max ampl. = 12.1515 D-energy-components:, 6, 2, 0.232067, 0.383937, 0.383996 Outputting test_diamond-dpwr.k06.b02.h5... D-energy-components:, 6, 2, 0.232067, 0.383937, 0.383996 Fixing d-field (band 3) phase by -0.0674729 + 0.997721i; max ampl. = 13.3616 D-energy-components:, 6, 3, 0.736337, 0.13197, 0.131693 Outputting test_diamond-dpwr.k06.b03.h5... D-energy-components:, 6, 3, 0.736337, 0.13197, 0.131693 Fixing d-field (band 4) phase by 0.997721 + 0.0674729i; max ampl. = 7.97914 D-energy-components:, 6, 4, 0.11714, 0.441055, 0.441805 Outputting test_diamond-dpwr.k06.b04.h5... D-energy-components:, 6, 4, 0.11714, 0.441055, 0.441805 Fixing d-field (band 5) phase by 0.997721 + 0.0674729i; max ampl. = 12.8979 D-energy-components:, 6, 5, 0.238579, 0.435374, 0.326046 Outputting test_diamond-dpwr.k06.b05.h5... D-energy-components:, 6, 5, 0.238579, 0.435374, 0.326046 solve_kpoint (0,0.6,0.3): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 44 iterations. freqs:, 7, 0, 0.6, 0.3, 0.994987, 0.369582, 0.388559, 0.467091, 0.487657, 0.518291 elapsed time for k point: 1.07450199127 solve_kpoint (0,0.575,0.225): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 98 iterations. freqs:, 8, 0, 0.575, 0.225, 0.940744, 0.356415, 0.3702, 0.457212, 0.470085, 0.538723 elapsed time for k point: 2.37502098083 solve_kpoint (0,0.55,0.15): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 28 iterations. freqs:, 9, 0, 0.55, 0.15, 0.9, 0.344555, 0.351994, 0.449598, 0.455588, 0.552575 elapsed time for k point: 0.689864873886 solve_kpoint (0,0.525,0.075): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 27 iterations. freqs:, 10, 0, 0.525, 0.075, 0.874643, 0.336533, 0.339294, 0.444662, 0.446211, 0.562057 elapsed time for k point: 0.665772914886 solve_kpoint (0,0.5,0): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 25 iterations. freqs:, 11, 0, 0.5, 0, 0.866025, 0.333545, 0.334937, 0.442371, 0.443555, 0.565558 elapsed time for k point: 0.617542982101 solve_kpoint (0,0.4,0): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 23 iterations. freqs:, 12, 0, 0.4, 0, 0.69282, 0.299948, 0.301256, 0.47018, 0.471285, 0.567351 elapsed time for k point: 0.569359064102 solve_kpoint (0,0.3,0): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 24 iterations. freqs:, 13, 0, 0.3, 0, 0.519615, 0.235132, 0.236238, 0.517406, 0.518221, 0.572633 elapsed time for k point: 0.593872070312 solve_kpoint (0,0.2,0): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 29 iterations. freqs:, 14, 0, 0.2, 0, 0.34641, 0.160616, 0.161417, 0.560554, 0.560855, 0.580923 elapsed time for k point: 0.713591098785 solve_kpoint (0,0.1,0): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 39 iterations. freqs:, 15, 0, 0.1, 0, 0.173205, 0.0813864, 0.0818061, 0.587706, 0.587881, 0.59052 elapsed time for k point: 0.954446077347 solve_kpoint (0,0,0): Solving for bands 3 to 5... Finished solving for bands 3 to 5 after 30 iterations. freqs:, 16, 0, 0, 0, 0, 0, 0, 0.59559, 0.595819, 0.595839 elapsed time for k point: 0.351135015488 solve_kpoint (0,0.1,0.1): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 29 iterations. freqs:, 17, 0, 0.1, 0.1, 0.2, 0.09409, 0.0944497, 0.585515, 0.585945, 0.591581 elapsed time for k point: 0.713964939117 solve_kpoint (0,0.2,0.2): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 32 iterations. freqs:, 18, 0, 0.2, 0.2, 0.4, 0.185559, 0.18625, 0.566601, 0.567223, 0.582064 elapsed time for k point: 0.786032915115 solve_kpoint (0,0.3,0.3): Solving for bands 1 to 5... iteration 166: trace = 1.068626547262253 (3.5136e-07% change) Finished solving for bands 1 to 5 after 195 iterations. freqs:, 19, 0, 0.3, 0.3, 0.6, 0.271029, 0.271988, 0.546939, 0.547286, 0.567915 elapsed time for k point: 4.70723295212 solve_kpoint (0,0.4,0.4): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 111 iterations. freqs:, 20, 0, 0.4, 0.4, 0.8, 0.343862, 0.344966, 0.517995, 0.519047, 0.546786 elapsed time for k point: 2.68737006187 solve_kpoint (0,0.5,0.5): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 38 iterations. freqs:, 21, 0, 0.5, 0.5, 1, 0.38015, 0.381243, 0.495263, 0.496788, 0.541208 elapsed time for k point: 0.930546045303 solve_kpoint (0.05,0.55,0.5): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 54 iterations. freqs:, 22, 0.05, 0.55, 0.5, 1.00499, 0.381309, 0.382411, 0.495948, 0.497425, 0.535972 elapsed time for k point: 1.3146879673 solve_kpoint (0.1,0.6,0.5): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 41 iterations. freqs:, 23, 0.1, 0.6, 0.5, 1.0198, 0.384516, 0.385642, 0.497116, 0.498376, 0.526207 elapsed time for k point: 1.00298190117 solve_kpoint (0.15,0.65,0.5): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 43 iterations. freqs:, 24, 0.15, 0.65, 0.5, 1.04403, 0.388899, 0.39006, 0.495493, 0.496211, 0.520859 elapsed time for k point: 1.05097007751 solve_kpoint (0.2,0.7,0.5): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 42 iterations. freqs:, 25, 0.2, 0.7, 0.5, 1.07703, 0.392891, 0.394091, 0.490499, 0.490808, 0.523019 elapsed time for k point: 1.02694296837 solve_kpoint (0.25,0.75,0.5): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 73 iterations. freqs:, 26, 0.25, 0.75, 0.5, 1.11803, 0.394551, 0.395772, 0.487945, 0.488132, 0.526056 elapsed time for k point: 1.7717089653 solve_kpoint (0.275,0.75,0.475): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 41 iterations. freqs:, 27, 0.275, 0.75, 0.475, 1.09772, 0.391745, 0.39651, 0.484446, 0.491809, 0.5199 elapsed time for k point: 1.00238108635 solve_kpoint (0.3,0.75,0.45): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 30 iterations. freqs:, 28, 0.3, 0.75, 0.45, 1.08167, 0.387217, 0.396766, 0.481876, 0.494898, 0.514052 elapsed time for k point: 0.738234996796 solve_kpoint (0.325,0.75,0.425): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 33 iterations. freqs:, 29, 0.325, 0.75, 0.425, 1.07005, 0.383285, 0.396393, 0.480245, 0.4979, 0.509391 elapsed time for k point: 0.810347795486 solve_kpoint (0.35,0.75,0.4): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 39 iterations. freqs:, 30, 0.35, 0.75, 0.4, 1.06301, 0.380687, 0.395955, 0.479389, 0.501411, 0.506376 elapsed time for k point: 0.95654797554 solve_kpoint (0.375,0.75,0.375): Solving for bands 1 to 5... Finished solving for bands 1 to 5 after 54 iterations. freqs:, 31, 0.375, 0.75, 0.375, 1.06066, 0.379784, 0.395774, 0.479133, 0.505118, 0.505264 .elapsed time for k point: 1.31514501572 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.394551078959 at Vector3<0.25, 0.75, 0.5> Band 2 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.396765801408 at Vector3<0.3, 0.75, 0.45> Band 3 range: 0.442370766817 at Vector3<0.0, 0.5, 0.0> to 0.595589963025 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.443555165122 at Vector3<0.0, 0.5, 0.0> to 0.59581913129 at Vector3<0.0, 0.0, 0.0> Band 5 range: 0.503013589515 at Vector3<0.0, 0.6, 0.4> to 0.595838685693 at Vector3<0.0, 0.0, 0.0> Gap from band 2 (0.396765801408) to band 3 (0.442370766817), 10.8694977996% total elapsed time for run: 34.9221539497 done test_diamond: 34.98s test_epsilon_input_file ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: Geometric object tree has depth 1 and 0 object nodes (vs. 0 actual objects) read in 32x32x1 epsilon-input-file "/build/meep-1.7.0/python/tests/data/eps_input_file_test.h5" Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00777816772461 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 61 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.554399, 0.761333, 0.761334, 0.894089, 0.998343, 0.998344, 1.07475 elapsed time for k point: 0.482046127319 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0879993, 0.552518, 0.748716, 0.762869, 0.888847, 0.992942, 0.998586, 1.07516 elapsed time for k point: 0.225471019745 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 19 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.175173, 0.545105, 0.716013, 0.766968, 0.874229, 0.997272, 0.999271, 1.07644 elapsed time for k point: 0.19616317749 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.260381, 0.525802, 0.677399, 0.772205, 0.858581, 1.00023, 1.01596, 1.07856 elapsed time for k point: 0.216088056564 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.341313, 0.485827, 0.650379, 0.776592, 0.84814, 1.00112, 1.04085, 1.08101 elapsed time for k point: 0.244250059128 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.399713, 0.44029, 0.641795, 0.778307, 0.844568, 1.00149, 1.05803, 1.08222 elapsed time for k point: 0.332690954208 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 25 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.410728, 0.444341, 0.636537, 0.78389, 0.839813, 0.968201, 1.03809, 1.08391 elapsed time for k point: 0.254701137543 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.441866, 0.455742, 0.622718, 0.799069, 0.81865, 0.919493, 0.999313, 1.08532 elapsed time for k point: 0.225333929062 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 17 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.472164, 0.488272, 0.604358, 0.769828, 0.821208, 0.893668, 0.95752, 1.08635 elapsed time for k point: 0.175740003586 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.488979, 0.542408, 0.586566, 0.707953, 0.84869, 0.885188, 0.917534, 1.08708 elapsed time for k point: 0.166048049927 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.497098, 0.578181, 0.578182, 0.668913, 0.878731, 0.883217, 0.88322, 1.08735 elapsed time for k point: 0.164855003357 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.466856, 0.53849, 0.591576, 0.732347, 0.837964, 0.88299, 0.936299, 1.08665 elapsed time for k point: 0.165532112122 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 20 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.365915, 0.534301, 0.628951, 0.8052, 0.817085, 0.882667, 1.0025, 1.08247 elapsed time for k point: 0.204981088638 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 25 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.247333, 0.542781, 0.682198, 0.781369, 0.883491, 0.892769, 1.05714, 1.06602 elapsed time for k point: 0.254638195038 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.124412, 0.55106, 0.736012, 0.76647, 0.888039, 0.959199, 1.0268, 1.07311 elapsed time for k point: 0.275825023651 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 36 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.554399, 0.761333, 0.761334, 0.894089, 0.998343, 0.998344, 1.07475 ..elapsed time for k point: 0.286900997162 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.497097784377 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.440289641051 at Vector3<0.5, 0.0, 0.0> to 0.578181285681 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.578181508201 at Vector3<0.5, 0.5, 0.0> to 0.761332777526 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.668912642436 at Vector3<0.5, 0.5, 0.0> to 0.80519998397 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.817084745355 at Vector3<0.3, 0.3, 0.0> to 0.894089391592 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.882667116499 at Vector3<0.3, 0.3, 0.0> to 1.00149263282 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.883219914368 at Vector3<0.5, 0.5, 0.0> to 1.05803098325 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.06602335979 at Vector3<0.2, 0.2, 0.0> to 1.08734582956 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.578181285681) to band 3 (0.578181508201), 3.84861035941e-05% Gap from band 4 (0.80519998397) to band 5 (0.817084745355), 1.46518809801% Gap from band 7 (1.05803098325) to band 8 (1.06602335979), 0.752558574758% total elapsed time for run: 3.88072800636 done test_epsilon_input_file: 3.88s test_first_brillouin_zone ======================== test_first_brillouin_zone: 0.60s test_fractional_lattice ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 4 x 4 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.1, 0, 0) (0, 0.1, 0) (0, 0, 1) Cell volume = 0.01 Reciprocal lattice vectors (/ 2 pi): (10, -0, 0) (-0, 10, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 9 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.000895023345947 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 9 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 2.88675, 2.88675, 2.88675, 2.88675, 4.08248, 4.08248, 4.08248 elapsed time for k point: 0.00325083732605 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 2 iterations. tefreqs:, 2, 0.1, 0, 0, 1, 0.288675, 2.59808, 2.90115, 2.90115, 3.17543, 3.88373, 3.88373, 4.29146 elapsed time for k point: 0.0019850730896 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 3, 0.2, 0, 0, 2, 0.57735, 2.3094, 2.94392, 2.94392, 3.4641, 3.69685, 3.69685, 4.50925 elapsed time for k point: 0.000560998916626 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 4, 0.3, 0, 0, 3, 0.866025, 2.02073, 3.01386, 3.01386, 3.52373, 3.52373, 3.75278, 4.73462 elapsed time for k point: 0.000584125518799 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 5, 0.4, 0, 0, 4, 1.1547, 1.73205, 3.10913, 3.10913, 3.3665, 3.3665, 4.04145, 4.96655 elapsed time for k point: 0.00056004524231 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 6, 0.5, 0, 0, 5, 1.44338, 1.44338, 3.22749, 3.22749, 3.22749, 3.22749, 4.33013, 5.20416 elapsed time for k point: 0.00055193901062 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 4 iterations. tefreqs:, 7, 0.5, 0.1, 0, 5.09902, 1.47196, 1.47196, 2.97209, 2.97209, 3.48807, 3.48807, 4.33974, 5.04975 elapsed time for k point: 0.00128602981567 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 8, 0.5, 0.2, 0, 5.38516, 1.55456, 1.55456, 2.72336, 2.72336, 3.75278, 3.75278, 4.36845, 4.90748 elapsed time for k point: 0.00244116783142 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 9, 0.5, 0.3, 0, 5.83095, 1.68325, 1.68325, 2.48328, 2.48328, 4.02078, 4.02078, 4.41588, 4.77842 elapsed time for k point: 0.000725030899048 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 10, 0.5, 0.4, 0, 6.40312, 1.84842, 1.84842, 2.25462, 2.25462, 4.29146, 4.29146, 4.48144, 4.66369 elapsed time for k point: 0.000710010528564 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 11, 0.5, 0.5, 0, 7.07107, 2.04124, 2.04124, 2.04124, 2.04124, 4.56435, 4.56435, 4.56435, 4.56435 elapsed time for k point: 0.000704050064087 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 12, 0.4, 0.4, 0, 5.65685, 1.63299, 2.08167, 2.08167, 2.44949, 4.20317, 4.20317, 4.39697, 4.39697 elapsed time for k point: 0.000549077987671 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 13, 0.3, 0.3, 0, 4.24264, 1.22474, 2.19848, 2.19848, 2.85774, 3.85141, 3.85141, 4.26224, 4.26224 elapsed time for k point: 0.000685930252075 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 14, 0.2, 0.2, 0, 2.82843, 0.816497, 2.38048, 2.38048, 3.26599, 3.51188, 3.51188, 4.16333, 4.16333 elapsed time for k point: 0.000679969787598 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 15, 0.1, 0.1, 0, 1.41421, 0.408248, 2.61406, 2.61406, 3.18852, 3.18852, 3.67423, 4.10284, 4.10284 elapsed time for k point: 0.000679016113281 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 1 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 2.88675, 2.88675, 2.88675, 2.88675, 4.08248, 4.08248, 4.08248 .elapsed time for k point: 0.000472068786621 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 2.04124145232 at Vector3<0.5, 0.5, 0.0> Band 2 range: 1.44337567297 at Vector3<0.5, 0.0, 0.0> to 2.88675134595 at Vector3<0.0, 0.0, 0.0> Band 3 range: 2.04124145232 at Vector3<0.5, 0.5, 0.0> to 3.22748612184 at Vector3<0.5, 0.0, 0.0> Band 4 range: 2.04124145232 at Vector3<0.5, 0.5, 0.0> to 3.26598632371 at Vector3<0.2, 0.2, 0.0> Band 5 range: 2.88675134595 at Vector3<0.0, 0.0, 0.0> to 4.56435464588 at Vector3<0.5, 0.5, 0.0> Band 6 range: 3.22748612184 at Vector3<0.5, 0.0, 0.0> to 4.56435464588 at Vector3<0.5, 0.5, 0.0> Band 7 range: 3.69684550214 at Vector3<0.2, 0.0, 0.0> to 4.56435464588 at Vector3<0.5, 0.5, 0.0> Band 8 range: 4.08248290464 at Vector3<0.0, 0.0, 0.0> to 5.20416499867 at Vector3<0.5, 0.0, 0.0> total elapsed time for run: 0.0187990665436 done test_fractional_lattice: 0.02s test_get_bfield ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00536513328552 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412633895874 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.2115521431 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.266826868057 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.246402978897 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.286125898361 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.405017852783 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.335952997208 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.286737918854 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.246001005173 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.236684083939 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.23406791687 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18616104126 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.21483206749 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293914079666 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344616889954 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.731035232544 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.94641709328 done Fixing b-field (band 8) phase by 1 + -2.58685e-07i; max ampl. = 4.48388 .test_get_bfield: 5.96s test_get_dfield ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00549912452698 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412708044052 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19987416267 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265527009964 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244752168655 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.28427696228 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402516841888 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.333348035812 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.285346984863 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244679927826 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.235181808472 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.233082056046 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.185194015503 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214734077454 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293805122375 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.3445789814 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.729852199554 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.91658782959 done Fixing d-field (band 8) phase by -2.58685e-07 + -1i; max ampl. = 8.66842 .test_get_dfield: 5.93s test_get_efield ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00565600395203 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412752866745 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19980192184 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265497922897 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244790077209 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.28428196907 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402462005615 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.333359003067 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.285347938538 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244635820389 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.23516201973 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.233057022095 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18519115448 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214658975601 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293842077255 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344480037689 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.729873895645 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.91645693779 done Fixing e-field (band 8) phase by -2.58685e-07 + -1i; max ampl. = 1.10099 .test_get_efield: 5.92s test_get_eigenvectors ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00534081459045 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.41258597374 Fixing h-field (band 1) phase by 1 + -0i; max ampl. = 1 Fixing h-field (band 2) phase by -0.791203 + -0.611554i; max ampl. = 5.12967 Fixing h-field (band 3) phase by -0.804161 + -0.594412i; max ampl. = 4.27896 Fixing h-field (band 4) phase by -0.925589 + -0.37853i; max ampl. = 4.27882 Fixing h-field (band 5) phase by -0.921393 + -0.388632i; max ampl. = 1.75894 Fixing h-field (band 6) phase by 0.798747 + -0.601666i; max ampl. = 3.7555 Fixing h-field (band 7) phase by 0.914893 + -0.403697i; max ampl. = 3.75555 Fixing h-field (band 8) phase by 0.0496898 + -0.998765i; max ampl. = 4.48388 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.20291686058 Fixing h-field (band 1) phase by -1 + 2.58759e-07i; max ampl. = 1.02721 Fixing h-field (band 2) phase by -0.999999 + 0.00112967i; max ampl. = 5.09036 Fixing h-field (band 3) phase by -0.000420085 + 1i; max ampl. = 3.73535 Fixing h-field (band 4) phase by 0.00025072 + 1i; max ampl. = 4.23726 Fixing h-field (band 5) phase by -1 + -7.07219e-05i; max ampl. = 1.49733 Fixing h-field (band 6) phase by 0.000417256 + 1i; max ampl. = 3.68915 Fixing h-field (band 7) phase by -2.54047e-05 + -1i; max ampl. = 2.46425 Fixing h-field (band 8) phase by -0.999999 + 0.00135078i; max ampl. = 4.67306 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265713214874 Fixing h-field (band 1) phase by 1 + 1.61913e-11i; max ampl. = 1.11365 Fixing h-field (band 2) phase by -1 + -6.0599e-09i; max ampl. = 4.92243 Fixing h-field (band 3) phase by -1.60728e-09 + -1i; max ampl. = 2.65638 Fixing h-field (band 4) phase by 1.65826e-08 + -1i; max ampl. = 4.33159 Fixing h-field (band 5) phase by -9.10685e-10 + -1i; max ampl. = 4.52032 Fixing h-field (band 6) phase by -2.54569e-07 + -1i; max ampl. = 3.38228 Fixing h-field (band 7) phase by -1 + 6.01886e-10i; max ampl. = 2.75759 Fixing h-field (band 8) phase by -1 + -1.44262e-06i; max ampl. = 4.29116 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.245809078217 Fixing h-field (band 1) phase by 1 + 1.46382e-15i; max ampl. = 1.27437 Fixing h-field (band 2) phase by -1 + 2.5837e-13i; max ampl. = 4.45322 Fixing h-field (band 3) phase by 1 + 1.90596e-13i; max ampl. = 2.62315 Fixing h-field (band 4) phase by 1.3841e-09 + 1i; max ampl. = 4.45542 Fixing h-field (band 5) phase by 2.24877e-14 + -1i; max ampl. = 5.0129 Fixing h-field (band 6) phase by -1.49202e-09 + 1i; max ampl. = 2.79024 Fixing h-field (band 7) phase by 1 + -6.11944e-14i; max ampl. = 2.99991 Fixing h-field (band 8) phase by -1 + 2.41237e-08i; max ampl. = 3.46534 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283733129501 Fixing h-field (band 1) phase by 1 + -2.31275e-17i; max ampl. = 1.5052 Fixing h-field (band 2) phase by -1 + 2.05769e-14i; max ampl. = 3.59052 Fixing h-field (band 3) phase by -1 + -3.21289e-15i; max ampl. = 3.69829 Fixing h-field (band 4) phase by -2.97216e-11 + -1i; max ampl. = 4.56151 Fixing h-field (band 5) phase by -4.55804e-14 + 1i; max ampl. = 5.08436 Fixing h-field (band 6) phase by -5.7344e-11 + 1i; max ampl. = 1.72494 Fixing h-field (band 7) phase by -1 + 4.72391e-15i; max ampl. = 3.24171 Fixing h-field (band 8) phase by -2.62183e-10 + -1i; max ampl. = 3.16645 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 44 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.444146156311 Fixing h-field (band 1) phase by -1 + -1.00867e-16i; max ampl. = 1.38878 Fixing h-field (band 2) phase by -1 + -4.95741e-16i; max ampl. = 3.48407 Fixing h-field (band 3) phase by 1 + -8.08231e-15i; max ampl. = 4.1103 Fixing h-field (band 4) phase by 3.3224e-13 + 1i; max ampl. = 4.60286 Fixing h-field (band 5) phase by -8.72097e-15 + -1i; max ampl. = 4.98821 Fixing h-field (band 6) phase by -1 + -5.83191e-12i; max ampl. = 2.6134 Fixing h-field (band 7) phase by -1 + 1.96034e-15i; max ampl. = 4.2595 Fixing h-field (band 8) phase by -3.89672e-12 + -1i; max ampl. = 3.64602 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332940816879 Fixing h-field (band 1) phase by 1 + 4.30434e-16i; max ampl. = 1.39153 Fixing h-field (band 2) phase by -1 + -6.55198e-14i; max ampl. = 3.54504 Fixing h-field (band 3) phase by 1 + -6.86665e-13i; max ampl. = 3.95334 Fixing h-field (band 4) phase by 6.0047e-13 + -1i; max ampl. = 4.50492 Fixing h-field (band 5) phase by -2.53743e-14 + 1i; max ampl. = 4.84663 Fixing h-field (band 6) phase by 9.49411e-16 + -1i; max ampl. = 1.79067 Fixing h-field (band 7) phase by -3.00043e-13 + 1i; max ampl. = 3.04657 Fixing h-field (band 8) phase by -1 + 3.3689e-13i; max ampl. = 4.1605 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284155130386 Fixing h-field (band 1) phase by 1 + -4.14098e-16i; max ampl. = 1.40192 Fixing h-field (band 2) phase by 1 + 1.96168e-13i; max ampl. = 3.73151 Fixing h-field (band 3) phase by -1 + 1.16289e-13i; max ampl. = 3.50756 Fixing h-field (band 4) phase by 1.20221e-12 + 1i; max ampl. = 4.25492 Fixing h-field (band 5) phase by -4.05804e-15 + -1i; max ampl. = 4.10702 Fixing h-field (band 6) phase by 4.28008e-15 + -1i; max ampl. = 3.1563 Fixing h-field (band 7) phase by -3.93746e-13 + 1i; max ampl. = 3.26912 Fixing h-field (band 8) phase by -1 + -8.89372e-14i; max ampl. = 4.78292 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244215011597 Fixing h-field (band 1) phase by 1 + 3.11065e-13i; max ampl. = 4.05119 Fixing h-field (band 2) phase by 1 + 3.50894e-16i; max ampl. = 1.42991 Fixing h-field (band 3) phase by -1 + -1.03977e-13i; max ampl. = 2.78416 Fixing h-field (band 4) phase by 1.83759e-15 + -1i; max ampl. = 2.53227 Fixing h-field (band 5) phase by -2.43866e-11 + -1i; max ampl. = 3.9265 Fixing h-field (band 6) phase by 2.64845e-14 + -1i; max ampl. = 4.52548 Fixing h-field (band 7) phase by -1.92075e-12 + -1i; max ampl. = 3.4739 Fixing h-field (band 8) phase by -1 + 7.47434e-12i; max ampl. = 4.9086 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.235565185547 Fixing h-field (band 1) phase by 1 + -2.78195e-16i; max ampl. = 4.46619 Fixing h-field (band 2) phase by -1 + 5.34534e-12i; max ampl. = 1.51506 Fixing h-field (band 3) phase by 1 + 7.3754e-16i; max ampl. = 1.66014 Fixing h-field (band 4) phase by -1 + 1.00067e-10i; max ampl. = 1.64641 Fixing h-field (band 5) phase by 2.02673e-14 + 1i; max ampl. = 3.54599 Fixing h-field (band 6) phase by -1.14711e-11 + 1i; max ampl. = 4.96988 Fixing h-field (band 7) phase by -5.3903e-15 + 1i; max ampl. = 3.72139 Fixing h-field (band 8) phase by -1 + -2.27983e-14i; max ampl. = 4.85167 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.233418226242 Fixing h-field (band 1) phase by 1 + 3.45026e-16i; max ampl. = 4.70977 Fixing h-field (band 2) phase by 1 + 4.1781e-13i; max ampl. = 1.38038 Fixing h-field (band 3) phase by -4.15507e-13 + 1i; max ampl. = 1.85505 Fixing h-field (band 4) phase by -1 + 7.58874e-11i; max ampl. = 1.90199 Fixing h-field (band 5) phase by -1 + 9.57011e-15i; max ampl. = 3.83362 Fixing h-field (band 6) phase by 1.175e-11 + -1i; max ampl. = 4.82728 Fixing h-field (band 7) phase by -1.63875e-12 + 1i; max ampl. = 5.11981 Fixing h-field (band 8) phase by -1 + 5.1434e-14i; max ampl. = 4.68981 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18550491333 Fixing h-field (band 1) phase by 1 + -5.70193e-17i; max ampl. = 3.59873 Fixing h-field (band 2) phase by 1 + -2.62827e-16i; max ampl. = 3.10702 Fixing h-field (band 3) phase by -3.10331e-10 + -1i; max ampl. = 1.92561 Fixing h-field (band 4) phase by 1.3935e-15 + -1i; max ampl. = 1.49149 Fixing h-field (band 5) phase by 2.28168e-15 + 1i; max ampl. = 3.30734 Fixing h-field (band 6) phase by 1.56498e-10 + -1i; max ampl. = 5.21642 Fixing h-field (band 7) phase by -1.3935e-15 + 1i; max ampl. = 3.66792 Fixing h-field (band 8) phase by 1 + -3.19795e-10i; max ampl. = 4.83365 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.215262174606 Fixing h-field (band 1) phase by 1 + 5.09795e-17i; max ampl. = 1.81199 Fixing h-field (band 2) phase by -1 + -1.92651e-16i; max ampl. = 4.51433 Fixing h-field (band 3) phase by -4.15077e-11 + -1i; max ampl. = 2.16532 Fixing h-field (band 4) phase by 2.09671e-13 + 1i; max ampl. = 3.56127 Fixing h-field (band 5) phase by 2.4042e-14 + 1i; max ampl. = 2.47045 Fixing h-field (band 6) phase by -2.43668e-09 + 1i; max ampl. = 5.05859 Fixing h-field (band 7) phase by -4.91446e-13 + 1i; max ampl. = 3.23411 Fixing h-field (band 8) phase by 1 + 8.93323e-10i; max ampl. = 4.7734 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.294186830521 Fixing h-field (band 1) phase by 1 + 1.96861e-16i; max ampl. = 1.2604 Fixing h-field (band 2) phase by -1 + -2.80791e-15i; max ampl. = 4.86397 Fixing h-field (band 3) phase by -7.60423e-11 + 1i; max ampl. = 2.6696 Fixing h-field (band 4) phase by 4.8467e-14 + 1i; max ampl. = 3.93612 Fixing h-field (band 5) phase by 3.1833e-10 + -1i; max ampl. = 4.6489 Fixing h-field (band 6) phase by -1.16076e-14 + -1i; max ampl. = 2.84446 Fixing h-field (band 7) phase by -1 + 1.99842e-15i; max ampl. = 3.74182 Fixing h-field (band 8) phase by -1 + 1.97956e-11i; max ampl. = 4.03853 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.346273899078 Fixing h-field (band 1) phase by 1 + 1.21105e-16i; max ampl. = 1.05606 Fixing h-field (band 2) phase by -1 + 1.90466e-15i; max ampl. = 5.06002 Fixing h-field (band 3) phase by 2.65142e-10 + -1i; max ampl. = 3.59476 Fixing h-field (band 4) phase by -1.07194e-14 + 1i; max ampl. = 4.14887 Fixing h-field (band 5) phase by -1 + -1.04798e-09i; max ampl. = 1.36944 Fixing h-field (band 6) phase by -6.70414e-13 + -1i; max ampl. = 3.24838 Fixing h-field (band 7) phase by 3.11216e-11 + -1i; max ampl. = 2.57459 Fixing h-field (band 8) phase by -1 + -6.70395e-15i; max ampl. = 4.85277 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.73144698143 Fixing h-field (band 1) phase by 1 + -0i; max ampl. = 1 Fixing h-field (band 2) phase by 1 + -1.05579e-14i; max ampl. = 5.12967 Fixing h-field (band 3) phase by 1.64884e-11 + -1i; max ampl. = 4.27896 Fixing h-field (band 4) phase by 2.80235e-09 + -1i; max ampl. = 4.27882 Fixing h-field (band 5) phase by 1 + -2.61597e-09i; max ampl. = 1.75894 Fixing h-field (band 6) phase by -1.11361e-12 + 1i; max ampl. = 3.7555 Fixing h-field (band 7) phase by -3.34637e-11 + -1i; max ampl. = 3.75555 Fixing h-field (band 8) phase by -1 + -4.03961e-14i; max ampl. = 4.48388 .Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970507 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293236 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097775% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293236) to band 8 (1.08786896351), 0.165232672435% total elapsed time for run: 6.00315093994 done test_get_eigenvectors: 6.03s test_get_hfield ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00547218322754 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412888050079 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19948983192 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265571117401 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244839906693 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.284520864487 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402667045593 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.333384037018 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.28545999527 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244804143906 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.235227823257 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.23317193985 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.185212850571 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214602947235 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293745040894 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.345296144485 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.729788064957 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.91785693169 done Fixing h-field (band 8) phase by 1 + -2.58685e-07i; max ampl. = 4.48388 .test_get_hfield: 5.93s test_handle_cvector ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.0057909488678 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 24 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.560518, 0.560561, 0.593296, 0.837451, 0.837595, 0.994129, 1.09832 elapsed time for k point: 0.193897008896 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tmfreqs:, 2, 0, 0.1, 0, 0.11547, 0.0711319, 0.538981, 0.559429, 0.617095, 0.834123, 0.839462, 0.988272, 1.08637 elapsed time for k point: 0.185428857803 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 3, 0, 0.2, 0, 0.23094, 0.138898, 0.508574, 0.556587, 0.65398, 0.825087, 0.84452, 0.968999, 1.05281 elapsed time for k point: 0.155902862549 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 4, 0, 0.3, 0, 0.34641, 0.198939, 0.479631, 0.553145, 0.693119, 0.813353, 0.850964, 0.932869, 1.02598 elapsed time for k point: 0.145370006561 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0, 0.4, 0, 0.46188, 0.244064, 0.4557, 0.550414, 0.730028, 0.80289, 0.856372, 0.891379, 1.01409 elapsed time for k point: 0.135756015778 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 6, 0, 0.5, 0, 0.57735, 0.262015, 0.445331, 0.549383, 0.749186, 0.797864, 0.85849, 0.870609, 1.01087 elapsed time for k point: 0.135455131531 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.262984, 0.4475, 0.545804, 0.752448, 0.797093, 0.860461, 0.870245, 0.99895 elapsed time for k point: 0.12536406517 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.265671, 0.453801, 0.535912, 0.761319, 0.795166, 0.866056, 0.869135, 0.973413 elapsed time for k point: 0.125514984131 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.269404, 0.463648, 0.52172, 0.773443, 0.792931, 0.867201, 0.874681, 0.94487 elapsed time for k point: 0.105767965317 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.273, 0.476141, 0.505606, 0.78524, 0.791235, 0.864672, 0.885801, 0.918597 elapsed time for k point: 0.105834007263 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.27469, 0.489984, 0.490239, 0.79072, 0.790832, 0.863041, 0.899109, 0.89925 elapsed time for k point: 0.0958018302917 Fixing e-field (band 1) phase by -1 + 4.11936e-08i; max ampl. = 0.93911 Fixing e-field (band 2) phase by 4.11936e-08 + 1i; max ampl. = 1.08316 Fixing e-field (band 3) phase by 1 + -4.11936e-08i; max ampl. = 0.877953 Fixing e-field (band 4) phase by 1 + -4.11936e-08i; max ampl. = 1.24657 Fixing e-field (band 5) phase by 4.11936e-08 + 1i; max ampl. = 1.10168 Fixing e-field (band 6) phase by 1 + -4.11936e-08i; max ampl. = 1.76186 Fixing e-field (band 7) phase by -1 + 4.11936e-08i; max ampl. = 1.0881 Fixing e-field (band 8) phase by -1 + 4.11937e-08i; max ampl. = 1.08096 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 11 iterations. tmfreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.2632, 0.47091, 0.51804, 0.764413, 0.795091, 0.864427, 0.896871, 0.932925 elapsed time for k point: 0.115503072739 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 13, -0.2, 0.2, 0, 0.4, 0.222593, 0.476537, 0.539917, 0.715636, 0.806516, 0.856013, 0.929969, 0.977199 elapsed time for k point: 0.125433921814 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.15856, 0.501245, 0.552927, 0.666818, 0.82116, 0.846938, 0.963589, 1.03113 elapsed time for k point: 0.135147094727 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 17 iterations. tmfreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.0819275, 0.534465, 0.558896, 0.622523, 0.832982, 0.840137, 0.98638, 1.08149 elapsed time for k point: 0.175779104233 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 16 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.560518, 0.560561, 0.593296, 0.837451, 0.837595, 0.994129, 1.09832 .elapsed time for k point: 0.130604028702 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.274690225862 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.445331080847 at Vector3<0.0, 0.5, 0.0> to 0.560518142316 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.490238914903 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.56056079478 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.593296087359 at Vector3<0.0, 0.0, 0.0> to 0.790719597444 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.790832076333 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.837451116754 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.837594852844 at Vector3<0.0, 0.0, 0.0> to 0.86720092649 at Vector3<-0.2, 0.4, 0.0> Band 7 range: 0.869134995574 at Vector3<-0.133333333333, 0.433333333333, 0.0> to 0.994129102266 at Vector3<0.0, 0.0, 0.0> Band 8 range: 0.899249909555 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 1.09831835292 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.274690225862) to band 2 (0.445331080847), 47.3988348385% Gap from band 3 (0.56056079478) to band 4 (0.593296087359), 5.6740646237% Gap from band 4 (0.790719597444) to band 5 (0.790832076333), 0.0142238651132% Gap from band 5 (0.837451116754) to band 6 (0.837594852844), 0.0171620472726% Gap from band 6 (0.86720092649) to band 7 (0.869134995574), 0.222775910928% total elapsed time for run: 2.20609092712 done Read lattice vectors Read Bloch wavevector (-0.333333, 0.333333, 0) Input lattice = (0.866025, 0.5, 0), (0.866025, -0.5, 0), (0, 0, 1) Output lattice = (2.59808, 1.5, 0), (1.29904, -2.25, 0), (0, 0, 3) Found complex vector dataset... Input data is rank 2, size 32x32x1. Rotating vectors by matrix [ 0.8660254038, 0.5, -0 0.5, -0.8660254038, -0 -0, -0, 1 ] Output data 96x83x1. real part range: 0 .. 0 imag part range: 0 .. 0 real part range: 0 .. 0 imag part range: 0 .. 0 real part range: -1.03932 .. 1.03493 imag part range: -1.08496 .. 1.08496 test_handle_cvector: 2.31s test_hermitian_eps ======================== Initializing eigensolver data Computing 10 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 10 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.11, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Initializing mu function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 10 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.166666666667, 0.0, 0.0> Vector3<0.333333333333, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.166666666667, 0.0> Vector3<0.5, 0.333333333333, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.333333333333, 0.333333333333, 0.0> Vector3<0.166666666667, 0.166666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00645899772644 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8, tm band 9, tm band 10 Solving for bands 2 to 10... iteration 187: trace = 2.685792852072181 (0.06564% change) iteration 375: trace = 2.412233911420111 (0.000203878% change) iteration 563: trace = 2.403481951047298 (0.00187391% change) iteration 751: trace = 2.396061830155213 (0.000726407% change) iteration 939: trace = 2.393618780619297 (0.000103643% change) iteration 1126: trace = 2.393106776512607 (1.88842e-05% change) iteration 1313: trace = 2.393048084374715 (1.82096e-06% change) iteration 1501: trace = 2.393040942029485 (1.03891e-06% change) iteration 1688: trace = 2.393039468500979 (4.1636e-08% change) Finished solving for bands 2 to 10 after 1865 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.265885, 0.356852, 0.36899, 0.503897, 0.506552, 0.539911, 0.635681, 0.645852, 0.660016 elapsed time for k point: 39.8856468201 solve_kpoint (0.166667,0,0): Solving for bands 1 to 10... iteration 162: trace = 2.412695325504449 (3.87223e-05% change) iteration 325: trace = 2.412645323997705 (3.6625e-06% change) iteration 488: trace = 2.41263429649223 (7.90336e-07% change) iteration 650: trace = 2.412631142371834 (2.30813e-07% change) iteration 812: trace = 2.412630165644012 (1.04979e-07% change) iteration 973: trace = 2.412629869181067 (1.70958e-08% change) iteration 1134: trace = 2.412629780671681 (1.92178e-08% change) iteration 1294: trace = 2.41262975628103 (8.9703e-09% change) iteration 1452: trace = 2.412629748925346 (2.03598e-10% change) Finished solving for bands 1 to 10 after 1481 iterations. tmfreqs:, 2, 0.166667, 0, 0, 0.166667, 0.123306, 0.278292, 0.357366, 0.369461, 0.503797, 0.506642, 0.538217, 0.63557, 0.645595, 0.659431 elapsed time for k point: 36.8820431232 solve_kpoint (0.333333,0,0): Solving for bands 1 to 10... iteration 160: trace = 2.452546786058099 (0.000172925% change) iteration 320: trace = 2.451925528785671 (2.89094e-05% change) iteration 479: trace = 2.451817796296818 (8.87018e-06% change) iteration 636: trace = 2.451796053756483 (1.06248e-06% change) iteration 791: trace = 2.451790851750453 (6.00801e-07% change) iteration 947: trace = 2.451789720771826 (7.99638e-08% change) iteration 1107: trace = 2.451789474276116 (1.64617e-08% change) iteration 1268: trace = 2.451789427446087 (3.27964e-09% change) iteration 1427: trace = 2.451789422719279 (9.57627e-11% change) Finished solving for bands 1 to 10 after 1427 iterations. tmfreqs:, 3, 0.333333, 0, 0, 0.333333, 0.194655, 0.331458, 0.361679, 0.377947, 0.502693, 0.506755, 0.527227, 0.633335, 0.644215, 0.653287 elapsed time for k point: 36.11409688 solve_kpoint (0.5,0,0): Solving for bands 1 to 10... iteration 160: trace = 2.449743859334588 (0.000163926% change) iteration 320: trace = 2.44933995781986 (1.36965e-05% change) iteration 480: trace = 2.449300678539895 (2.80925e-06% change) iteration 636: trace = 2.449294256544278 (3.42244e-07% change) iteration 791: trace = 2.449293066789633 (2.08498e-07% change) iteration 947: trace = 2.449292823863315 (1.48259e-08% change) iteration 1109: trace = 2.449292770677265 (3.12265e-09% change) iteration 1269: trace = 2.449292759835446 (8.89595e-10% change) Finished solving for bands 1 to 10 after 1361 iterations. tmfreqs:, 4, 0.5, 0, 0, 0.5, 0.208799, 0.348978, 0.365278, 0.443856, 0.477901, 0.506845, 0.509076, 0.617527, 0.63971, 0.64689 elapsed time for k point: 34.4241018295 solve_kpoint (0.5,0.166667,0): Solving for bands 1 to 10... iteration 160: trace = 2.486229699268588 (8.91114e-05% change) iteration 320: trace = 2.48589146980849 (1.59955e-05% change) iteration 476: trace = 2.485867477967553 (3.14142e-07% change) iteration 632: trace = 2.485865413227835 (1.54927e-07% change) iteration 787: trace = 2.485865217635904 (1.70618e-08% change) iteration 947: trace = 2.485865196104766 (3.16024e-10% change) Finished solving for bands 1 to 10 after 1007 iterations. tmfreqs:, 5, 0.5, 0.166667, 0, 0.527046, 0.210673, 0.351103, 0.364915, 0.453355, 0.500502, 0.507018, 0.510125, 0.616821, 0.642478, 0.646894 elapsed time for k point: 25.5831727982 solve_kpoint (0.5,0.333333,0): Solving for bands 1 to 10... iteration 160: trace = 2.579194165333398 (0.000222286% change) iteration 321: trace = 2.578886672388053 (1.49791e-06% change) iteration 480: trace = 2.578881725213738 (4.2728e-08% change) iteration 635: trace = 2.578881666204824 (5.93598e-10% change) Finished solving for bands 1 to 10 after 693 iterations. tmfreqs:, 6, 0.5, 0.333333, 0, 0.600925, 0.214081, 0.353217, 0.365001, 0.471977, 0.507165, 0.51079, 0.563894, 0.615052, 0.646178, 0.648357 elapsed time for k point: 17.5754060745 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 10... iteration 158: trace = 2.653947554069334 (0.000204011% change) iteration 320: trace = 2.653861085139579 (1.6777e-07% change) iteration 480: trace = 2.653860957172534 (1.0786e-09% change) Finished solving for bands 1 to 10 after 507 iterations. tmfreqs:, 7, 0.5, 0.5, 0, 0.707107, 0.215649, 0.353602, 0.365269, 0.480748, 0.507335, 0.512534, 0.60792, 0.619784, 0.648908, 0.650323 elapsed time for k point: 12.730494976 solve_kpoint (0.333333,0.333333,0): Solving for bands 1 to 10... iteration 160: trace = 2.532315223293633 (5.62071e-05% change) iteration 320: trace = 2.532227788160972 (8.75675e-07% change) iteration 478: trace = 2.532226620570992 (3.10053e-08% change) Finished solving for bands 1 to 10 after 627 iterations. tmfreqs:, 8, 0.333333, 0.333333, 0, 0.471405, 0.210879, 0.35463, 0.361245, 0.439486, 0.507022, 0.508252, 0.543815, 0.620599, 0.646589, 0.651154 elapsed time for k point: 15.9155499935 solve_kpoint (0.166667,0.166667,0): Solving for bands 1 to 10... iteration 157: trace = 2.429245873968515 (4.05472e-05% change) iteration 314: trace = 2.429165116624128 (4.2915e-06% change) iteration 476: trace = 2.429160229797796 (5.94866e-07% change) iteration 637: trace = 2.429159881949917 (3.14344e-08% change) iteration 798: trace = 2.429159855500801 (1.5507e-09% change) Finished solving for bands 1 to 10 after 863 iterations. tmfreqs:, 9, 0.166667, 0.166667, 0, 0.235702, 0.162353, 0.295874, 0.356214, 0.372161, 0.504258, 0.506735, 0.537355, 0.633231, 0.645916, 0.65717 elapsed time for k point: 21.6964101791 solve_kpoint (0,0,0): Solving for bands 2 to 10... iteration 188: trace = 2.393045258230422 (5.92283e-06% change) iteration 376: trace = 2.393039639181545 (1.41188e-07% change) iteration 563: trace = 2.393039436534968 (7.78372e-09% change) Finished solving for bands 2 to 10 after 709 iterations. tmfreqs:, 10, 0, 0, 0, 0, 0, 0.265885, 0.356852, 0.36899, 0.503897, 0.506552, 0.539911, 0.635681, 0.645852, 0.660016 .elapsed time for k point: 15.1720399857 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.215648526303 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.265884978562 at Vector3<0.0, 0.0, 0.0> to 0.354630240548 at Vector3<0.333333333333, 0.333333333333, 0.0> Band 3 range: 0.356214235591 at Vector3<0.166666666667, 0.166666666667, 0.0> to 0.365278335177 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.368990136665 at Vector3<0.0, 0.0, 0.0> to 0.48074846784 at Vector3<0.5, 0.5, 0.0> Band 5 range: 0.477901482401 at Vector3<0.5, 0.0, 0.0> to 0.507335289426 at Vector3<0.5, 0.5, 0.0> Band 6 range: 0.506551858749 at Vector3<0.0, 0.0, 0.0> to 0.512534369238 at Vector3<0.5, 0.5, 0.0> Band 7 range: 0.509075874398 at Vector3<0.5, 0.0, 0.0> to 0.607920081806 at Vector3<0.5, 0.5, 0.0> Band 8 range: 0.615051876486 at Vector3<0.5, 0.333333333333, 0.0> to 0.635680784606 at Vector3<0.0, 0.0, 0.0> Band 9 range: 0.639709760933 at Vector3<0.5, 0.0, 0.0> to 0.648907835931 at Vector3<0.5, 0.5, 0.0> Band 10 range: 0.646889890768 at Vector3<0.5, 0.0, 0.0> to 0.660016332876 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.215648526303) to band 2 (0.265884978562), 20.8651949456% Gap from band 2 (0.354630240548) to band 3 (0.356214235591), 0.44566571058% Gap from band 3 (0.365278335177) to band 4 (0.368990136665), 1.01102025493% Gap from band 7 (0.607920081806) to band 8 (0.615051876486), 1.16630551191% Gap from band 8 (0.635680784606) to band 9 (0.639709760933), 0.631802758976% total elapsed time for run: 255.987699986 done test_hermitian_eps: 255.99s test_hole_slab ======================== Initializing eigensolver data Computing 9 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 32 x 32 x 64. Solving for 9 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 4) Cell volume = 3.4641 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 0.25) Geometric objects: block, center = (0,0,1) size (1e+20,1e+20,2) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,1e+20,0.5) axes (1,0,0), (0,1,0), (0,0,1) cylinder, center = (0,0,0) radius 0.3, height 4, axis (0, 0, 1) Geometric object tree has depth 3 and 41 object nodes (vs. 3 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: zeven. Initializing fields to random numbers... 1 k-points Vector3<-0.333333333333, 0.333333333333, 0.0> elapsed time for initialization: 0.402000904083 solve_kpoint (-0.333333,0.333333,0): zevenfreqs:, k index, k1, k2, k3, kmag/2pi, zeven band 1, zeven band 2, zeven band 3, zeven band 4, zeven band 5, zeven band 6, zeven band 7, zeven band 8, zeven band 9 Solving for bands 1 to 9... iteration 3: trace = 2.669410204363277 (21.1015% change) iteration 7: trace = 2.207088432445588 (0.946438% change) iteration 11: trace = 2.189324950475771 (0.0587994% change) iteration 15: trace = 2.188000083848737 (0.00306256% change) iteration 19: trace = 2.187959777341853 (8.40403e-05% change) iteration 23: trace = 2.187958133390959 (7.72856e-06% change) iteration 27: trace = 2.187958069720183 (6.50761e-10% change) iteration 31: trace = 2.187958069704318 (9.46651e-11% change) Finished solving for bands 1 to 9 after 31 iterations. zevenfreqs:, 1, -0.333333, 0.333333, 0, 0.666667, 0.265718, 0.356033, 0.35608, 0.513443, 0.529044, 0.529286, 0.586884, 0.587044, 0.59253 elapsed time for k point: 39.2546489239 total elapsed time for run: 39.6568861008 done Fixing h-field (band 9) phase by -0.0246538 + -0.999696i; max ampl. = 2.37913 .Outputting fields to test_hole_slab-h.k01.b09.z.zeven.h5... eigensolver iterations for 1 kpoints: 31.0-31.0, mean = 31.0, median = 31.0 mean flops per iteration = 232048195.548 mean time per iteration = 1.27925439035 s test_hole_slab: 39.72s test_honey_rods ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0.166667,0.166667,0) radius 0.14, height 1e+20, axis (0, 0, 1) cylinder, center = (-0.166667,-0.166667,0) radius 0.14, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 2 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00624585151672 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 38 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.429848, 0.72559, 0.725871, 0.769398, 0.785279, 0.785658, 1.14928 elapsed time for k point: 0.30362701416 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tmfreqs:, 2, 0, 0.1, 0, 0.11547, 0.0718091, 0.426256, 0.719077, 0.721195, 0.746706, 0.789405, 0.817423, 1.1362 elapsed time for k point: 0.344451904297 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 17 iterations. tmfreqs:, 3, 0, 0.2, 0, 0.23094, 0.141741, 0.415465, 0.686677, 0.711385, 0.749716, 0.79757, 0.853936, 1.10829 elapsed time for k point: 0.174740076065 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 4, 0, 0.3, 0, 0.34641, 0.20751, 0.397084, 0.652562, 0.701411, 0.762486, 0.805503, 0.884623, 1.08016 elapsed time for k point: 0.164423942566 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 5, 0, 0.4, 0, 0.46188, 0.265341, 0.370741, 0.628064, 0.694375, 0.774438, 0.810881, 0.90516, 1.06067 elapsed time for k point: 0.15461397171 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 6, 0, 0.5, 0, 0.57735, 0.29861, 0.348622, 0.619112, 0.691863, 0.779379, 0.812758, 0.912256, 1.05404 elapsed time for k point: 0.136071920395 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.300268, 0.34895, 0.613584, 0.697444, 0.77731, 0.813624, 0.911843, 1.05612 elapsed time for k point: 0.12495803833 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.305133, 0.349455, 0.601266, 0.710158, 0.771875, 0.815569, 0.910763, 1.06226 elapsed time for k point: 0.145504951477 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.312896, 0.348732, 0.588291, 0.724572, 0.764453, 0.817539, 0.909459, 1.0721 elapsed time for k point: 0.144765853882 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.323089, 0.344682, 0.578717, 0.737675, 0.756131, 0.818898, 0.9085, 1.08513 elapsed time for k point: 0.165555953979 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tmfreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.335117, 0.335185, 0.575171, 0.747622, 0.747877, 0.819365, 0.908267, 1.10053 elapsed time for k point: 0.283215999603 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.29626, 0.362261, 0.589196, 0.732899, 0.756464, 0.817346, 0.906977, 1.07543 elapsed time for k point: 0.154548883438 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 13, -0.2, 0.2, 0, 0.4, 0.235812, 0.389044, 0.624419, 0.723246, 0.753158, 0.811064, 0.894195, 1.07529 elapsed time for k point: 0.135403871536 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.162664, 0.41101, 0.66948, 0.720558, 0.745707, 0.801251, 0.86394, 1.09993 elapsed time for k point: 0.135120153427 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.0828005, 0.425068, 0.71283, 0.723369, 0.744337, 0.790724, 0.823156, 1.13248 elapsed time for k point: 0.165457010269 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.429848, 0.72559, 0.725871, 0.769398, 0.785279, 0.785658, 1.14928 elapsed time for k point: 0.735366106033 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.335116766035 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.335185075992 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.429848112378 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.575170934543 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.725589767226 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.691862772477 at Vector3<0.0, 0.5, 0.0> to 0.747622077831 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.744337449709 at Vector3<-0.0666666666667, 0.0666666666667, 0.0> to 0.779379221209 at Vector3<0.0, 0.5, 0.0> Band 6 range: 0.785278698442 at Vector3<0.0, 0.0, 0.0> to 0.819365286171 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 7 range: 0.785657777186 at Vector3<0.0, 0.0, 0.0> to 0.912256043901 at Vector3<0.0, 0.5, 0.0> Band 8 range: 1.05403505081 at Vector3<0.0, 0.5, 0.0> to 1.14927693892 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.335116766035) to band 2 (0.335185075992), 0.0203818494639% Gap from band 2 (0.429848112378) to band 3 (0.575170934543), 28.9194165245% Gap from band 5 (0.779379221209) to band 6 (0.785278698442), 0.754091633513% Gap from band 7 (0.912256043901) to band 8 (1.05403505081), 14.4209580456% total elapsed time for run: 3.47578287125 done Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0.166667,0.166667,0) radius 0.14, height 1e+20, axis (0, 0, 1) cylinder, center = (-0.166667,-0.166667,0) radius 0.14, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 2 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00639510154724 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 91 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.727845, 0.788088, 0.920961, 0.922085, 1.01687, 1.01845, 1.24334 elapsed time for k point: 0.717131853104 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 50 iterations. tefreqs:, 2, 0, 0.1, 0, 0.11547, 0.10214, 0.723854, 0.784332, 0.900771, 0.902155, 1.03144, 1.03948, 1.2036 elapsed time for k point: 0.501252889633 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0, 0.2, 0, 0.23094, 0.203735, 0.707761, 0.769484, 0.867508, 0.869257, 1.05383, 1.07964, 1.17834 elapsed time for k point: 0.264625072479 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 4, 0, 0.3, 0, 0.34641, 0.304067, 0.663675, 0.75048, 0.840899, 0.85049, 1.07273, 1.11526, 1.16655 elapsed time for k point: 0.263640165329 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 31 iterations. tefreqs:, 5, 0, 0.4, 0, 0.46188, 0.401691, 0.590457, 0.741009, 0.822518, 0.84569, 1.08497, 1.13738, 1.16665 elapsed time for k point: 0.313822984695 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 39 iterations. tefreqs:, 6, 0, 0.5, 0, 0.57735, 0.478396, 0.520318, 0.738393, 0.816173, 0.844859, 1.08909, 1.14451, 1.17202 elapsed time for k point: 0.391649007797 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 30 iterations. tefreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.48205, 0.522761, 0.727295, 0.819868, 0.844497, 1.09131, 1.14544, 1.17197 elapsed time for k point: 0.303004026413 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.492796, 0.529981, 0.69937, 0.826669, 0.843482, 1.09673, 1.14811, 1.17183 elapsed time for k point: 0.33310008049 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.510012, 0.541662, 0.661523, 0.832379, 0.841947, 1.10264, 1.15222, 1.1717 elapsed time for k point: 0.341856002808 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 35 iterations. tefreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.532564, 0.557306, 0.617759, 0.836201, 0.840118, 1.10684, 1.15685, 1.1722 elapsed time for k point: 0.352535009384 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 72 iterations. tefreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.553509, 0.57602, 0.576336, 0.838242, 0.838556, 1.10835, 1.15937, 1.17498 elapsed time for k point: 0.720295906067 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 101 iterations. tefreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.461593, 0.620594, 0.628556, 0.836746, 0.840202, 1.10228, 1.15102, 1.16591 elapsed time for k point: 1.00547814369 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 25 iterations. tefreqs:, 13, -0.2, 0.2, 0, 0.4, 0.350141, 0.666671, 0.698454, 0.841979, 0.843343, 1.08599, 1.12874, 1.16367 elapsed time for k point: 0.254015207291 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.234979, 0.703081, 0.756416, 0.858378, 0.861716, 1.0625, 1.09087, 1.1734 elapsed time for k point: 0.245048999786 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.117907, 0.722467, 0.782825, 0.895483, 0.896999, 1.03533, 1.04486, 1.19885 elapsed time for k point: 0.266945838928 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 67 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.727845, 0.788088, 0.920961, 0.922085, 1.01687, 1.01845, 1.24334 .elapsed time for k point: 0.530702829361 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.553509348997 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.520318359084 at Vector3<0.0, 0.5, 0.0> to 0.727844751545 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.576335859651 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.788087893062 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.816173029367 at Vector3<0.0, 0.5, 0.0> to 0.920961143214 at Vector3<0.0, 0.0, 0.0> Band 5 range: 0.838556235961 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.92208494259 at Vector3<0.0, 0.0, 0.0> Band 6 range: 1.01686566839 at Vector3<0.0, 0.0, 0.0> to 1.10835366734 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 7 range: 1.01845072531 at Vector3<0.0, 0.0, 0.0> to 1.15937022737 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 8 range: 1.16367190504 at Vector3<-0.2, 0.2, 0.0> to 1.24334118399 at Vector3<0.0, 0.0, 0.0> Gap from band 3 (0.788087893062) to band 4 (0.816173029367), 3.50131776109% Gap from band 5 (0.92208494259) to band 6 (1.01686566839), 9.77649716965% Gap from band 7 (1.15937022737) to band 8 (1.16367190504), 0.370348656678% total elapsed time for run: 6.81313705444 done test_honey_rods: 10.29s test_line_defect ======================== Initializing eigensolver data Computing 12 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 224 x 1. Solving for 6 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (6.06218, -3.5, 0) (0, 0, 1) Cell volume = 6.06218 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.0824786, -0.142857, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,3,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-3,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 3 and 9 object nodes (vs. 8 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 6 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.35, 0.0> Vector3<0.2, 0.7, 0.0> Vector3<0.3, 1.05, 0.0> Vector3<0.4, 1.4, 0.0> Vector3<0.5, 1.75, 0.0> elapsed time for initialization: 0.0475749969482 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8, tm band 9, tm band 10, tm band 11, tm band 12 Solving for bands 2 to 7... Finished solving for bands 2 to 7 after 16 iterations. Solving for bands 8 to 12... iteration 66: trace = 1.211589500878303 (1.26859e-08% change) Finished solving for bands 8 to 12 after 76 iterations. Finished k-point with 39.6667 mean iterations/band. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.100888, 0.110544, 0.191438, 0.209077, 0.252769, 0.337337, 0.453613, 0.461172, 0.496485, 0.499488, 0.545123 elapsed time for k point: 5.61879706383 Fixing e-field (band 1) phase by 1 + -0i; max ampl. = 0 Fixing e-field (band 2) phase by -0.934778 + 0.355231i; max ampl. = 0.36443 Fixing e-field (band 3) phase by 0.41377 + -0.910381i; max ampl. = 0.363694 Fixing e-field (band 4) phase by -0.042412 + 0.9991i; max ampl. = 0.40619 Fixing e-field (band 5) phase by -0.829535 + -0.558455i; max ampl. = 0.458526 Fixing e-field (band 6) phase by 0.636619 + 0.771179i; max ampl. = 0.461015 Fixing e-field (band 7) phase by -0.696974 + 0.717096i; max ampl. = 0.87849 Fixing e-field (band 8) phase by -0.801423 + 0.598098i; max ampl. = 0.582082 Fixing e-field (band 9) phase by 0.502154 + -0.864778i; max ampl. = 0.503748 Fixing e-field (band 10) phase by -0.833535 + 0.552467i; max ampl. = 0.514872 Fixing e-field (band 11) phase by -0.701379 + 0.712788i; max ampl. = 0.525048 Fixing e-field (band 12) phase by -0.711256 + 0.702933i; max ampl. = 0.596428 Outputting fields to test_line_defect-e.k01.b01.z.tm.h5... Outputting fields to test_line_defect-e.k01.b02.z.tm.h5... Outputting fields to test_line_defect-e.k01.b03.z.tm.h5... Outputting fields to test_line_defect-e.k01.b04.z.tm.h5... Outputting fields to test_line_defect-e.k01.b05.z.tm.h5... Outputting fields to test_line_defect-e.k01.b06.z.tm.h5... Outputting fields to test_line_defect-e.k01.b07.z.tm.h5... Outputting fields to test_line_defect-e.k01.b08.z.tm.h5... Outputting fields to test_line_defect-e.k01.b09.z.tm.h5... Outputting fields to test_line_defect-e.k01.b10.z.tm.h5... Outputting fields to test_line_defect-e.k01.b11.z.tm.h5... Outputting fields to test_line_defect-e.k01.b12.z.tm.h5... solve_kpoint (0.1,0.35,0): Solving for bands 1 to 6... Finished solving for bands 1 to 6 after 8 iterations. Solving for bands 7 to 12... Finished solving for bands 7 to 12 after 37 iterations. Finished k-point with 22.5 mean iterations/band. tmfreqs:, 2, 0.1, 0.35, 0, 0.1, 0.0643286, 0.117273, 0.128193, 0.198551, 0.216266, 0.255606, 0.34632, 0.457251, 0.464418, 0.494572, 0.497876, 0.533413 elapsed time for k point: 3.06063294411 Fixing e-field (band 1) phase by -1 + 2.71659e-09i; max ampl. = 0.279221 Fixing e-field (band 2) phase by 0.0662249 + 0.997805i; max ampl. = 0.368961 Fixing e-field (band 3) phase by 1 + -3.0824e-07i; max ampl. = 0.357513 Fixing e-field (band 4) phase by -0.00791528 + -0.999969i; max ampl. = 0.410959 Fixing e-field (band 5) phase by -1 + 1.15878e-06i; max ampl. = 0.464942 Fixing e-field (band 6) phase by 0.00071696 + 1i; max ampl. = 0.463983 Fixing e-field (band 7) phase by 1 + 1.05437e-08i; max ampl. = 0.893105 Fixing e-field (band 8) phase by -1 + 4.80894e-06i; max ampl. = 0.585113 Fixing e-field (band 9) phase by -2.44703e-05 + 1i; max ampl. = 0.51118 Fixing e-field (band 10) phase by -1 + -8.06363e-05i; max ampl. = 0.50134 Fixing e-field (band 11) phase by 2.03297e-05 + 1i; max ampl. = 0.518018 Fixing e-field (band 12) phase by -0.000314773 + -1i; max ampl. = 0.377816 Outputting fields to test_line_defect-e.k02.b01.z.tm.h5... Outputting fields to test_line_defect-e.k02.b02.z.tm.h5... Outputting fields to test_line_defect-e.k02.b03.z.tm.h5... Outputting fields to test_line_defect-e.k02.b04.z.tm.h5... Outputting fields to test_line_defect-e.k02.b05.z.tm.h5... Outputting fields to test_line_defect-e.k02.b06.z.tm.h5... Outputting fields to test_line_defect-e.k02.b07.z.tm.h5... Outputting fields to test_line_defect-e.k02.b08.z.tm.h5... Outputting fields to test_line_defect-e.k02.b09.z.tm.h5... Outputting fields to test_line_defect-e.k02.b10.z.tm.h5... Outputting fields to test_line_defect-e.k02.b11.z.tm.h5... Outputting fields to test_line_defect-e.k02.b12.z.tm.h5... solve_kpoint (0.2,0.7,0): Solving for bands 1 to 6... Finished solving for bands 1 to 6 after 8 iterations. Solving for bands 7 to 12... Finished solving for bands 7 to 12 after 32 iterations. Finished k-point with 20 mean iterations/band. tmfreqs:, 3, 0.2, 0.7, 0, 0.2, 0.12511, 0.154647, 0.167476, 0.216994, 0.234024, 0.262757, 0.372785, 0.466507, 0.471319, 0.486474, 0.490761, 0.511423 elapsed time for k point: 2.71880412102 Fixing e-field (band 1) phase by 1 + -6.65677e-16i; max ampl. = 0.316626 Fixing e-field (band 2) phase by 1.43624e-11 + -1i; max ampl. = 0.383063 Fixing e-field (band 3) phase by 1 + -1.03251e-14i; max ampl. = 0.3761 Fixing e-field (band 4) phase by 8.70557e-10 + 1i; max ampl. = 0.424925 Fixing e-field (band 5) phase by 1 + 1.32521e-13i; max ampl. = 0.480327 Fixing e-field (band 6) phase by 4.77922e-10 + -1i; max ampl. = 0.472091 Fixing e-field (band 7) phase by 1 + -1.08091e-12i; max ampl. = 0.919529 Fixing e-field (band 8) phase by -1 + -1.65794e-11i; max ampl. = 0.593898 Fixing e-field (band 9) phase by -1.10263e-07 + -1i; max ampl. = 0.521242 Fixing e-field (band 10) phase by -1 + 3.84155e-10i; max ampl. = 0.454743 Fixing e-field (band 11) phase by -4.86281e-08 + -1i; max ampl. = 0.493615 Fixing e-field (band 12) phase by -1.98485e-06 + -1i; max ampl. = 0.473136 Outputting fields to test_line_defect-e.k03.b01.z.tm.h5... Outputting fields to test_line_defect-e.k03.b02.z.tm.h5... Outputting fields to test_line_defect-e.k03.b03.z.tm.h5... Outputting fields to test_line_defect-e.k03.b04.z.tm.h5... Outputting fields to test_line_defect-e.k03.b05.z.tm.h5... Outputting fields to test_line_defect-e.k03.b06.z.tm.h5... Outputting fields to test_line_defect-e.k03.b07.z.tm.h5... Outputting fields to test_line_defect-e.k03.b08.z.tm.h5... Outputting fields to test_line_defect-e.k03.b09.z.tm.h5... Outputting fields to test_line_defect-e.k03.b10.z.tm.h5... Outputting fields to test_line_defect-e.k03.b11.z.tm.h5... Outputting fields to test_line_defect-e.k03.b12.z.tm.h5... solve_kpoint (0.3,1.05,0): Solving for bands 1 to 6... Finished solving for bands 1 to 6 after 8 iterations. Solving for bands 7 to 12... iteration 59: trace = 1.306672591538087 (3.22794e-06% change) Finished solving for bands 7 to 12 after 95 iterations. Finished k-point with 51.5 mean iterations/band. tmfreqs:, 4, 0.3, 1.05, 0, 0.3, 0.179731, 0.197126, 0.209614, 0.239781, 0.253491, 0.270127, 0.412201, 0.46839, 0.470281, 0.47669, 0.478853, 0.489567 elapsed time for k point: 7.02546882629 Fixing e-field (band 1) phase by 1 + -1.09836e-16i; max ampl. = 0.362092 Fixing e-field (band 2) phase by 1.44668e-12 + -1i; max ampl. = 0.407764 Fixing e-field (band 3) phase by -1 + -9.0973e-16i; max ampl. = 0.420136 Fixing e-field (band 4) phase by 7.75608e-12 + 1i; max ampl. = 0.446788 Fixing e-field (band 5) phase by 1 + 3.3037e-15i; max ampl. = 0.496332 Fixing e-field (band 6) phase by -1.24081e-11 + 1i; max ampl. = 0.481878 Fixing e-field (band 7) phase by 1 + 3.59872e-13i; max ampl. = 0.896831 Fixing e-field (band 8) phase by 7.179e-11 + -1i; max ampl. = 0.458802 Fixing e-field (band 9) phase by -1 + -2.56317e-11i; max ampl. = 0.495105 Fixing e-field (band 10) phase by 1 + -1.75874e-12i; max ampl. = 0.483552 Fixing e-field (band 11) phase by -3.74226e-11 + 1i; max ampl. = 0.523494 Fixing e-field (band 12) phase by -1 + -7.30658e-11i; max ampl. = 0.423458 Outputting fields to test_line_defect-e.k04.b01.z.tm.h5... Outputting fields to test_line_defect-e.k04.b02.z.tm.h5... Outputting fields to test_line_defect-e.k04.b03.z.tm.h5... Outputting fields to test_line_defect-e.k04.b04.z.tm.h5... Outputting fields to test_line_defect-e.k04.b05.z.tm.h5... Outputting fields to test_line_defect-e.k04.b06.z.tm.h5... Outputting fields to test_line_defect-e.k04.b07.z.tm.h5... Outputting fields to test_line_defect-e.k04.b08.z.tm.h5... Outputting fields to test_line_defect-e.k04.b09.z.tm.h5... Outputting fields to test_line_defect-e.k04.b10.z.tm.h5... Outputting fields to test_line_defect-e.k04.b11.z.tm.h5... Outputting fields to test_line_defect-e.k04.b12.z.tm.h5... solve_kpoint (0.4,1.4,0): Solving for bands 1 to 6... Finished solving for bands 1 to 6 after 9 iterations. Solving for bands 7 to 12... iteration 59: trace = 1.269582086792721 (1.43518e-09% change) Finished solving for bands 7 to 12 after 67 iterations. Finished k-point with 38 mean iterations/band. tmfreqs:, 5, 0.4, 1.4, 0, 0.4, 0.225148, 0.234786, 0.243351, 0.257936, 0.264707, 0.270821, 0.441523, 0.454532, 0.455044, 0.464121, 0.471551, 0.472447 elapsed time for k point: 5.16771888733 Fixing e-field (band 1) phase by 1 + -1.18438e-16i; max ampl. = 0.407996 Fixing e-field (band 2) phase by 8.20705e-12 + -1i; max ampl. = 0.441101 Fixing e-field (band 3) phase by 1 + 2.58458e-15i; max ampl. = 0.464954 Fixing e-field (band 4) phase by 7.60398e-12 + 1i; max ampl. = 0.46974 Fixing e-field (band 5) phase by 1 + 6.32791e-15i; max ampl. = 0.505749 Fixing e-field (band 6) phase by -1.43037e-11 + 1i; max ampl. = 0.483913 Fixing e-field (band 7) phase by 1 + 2.71837e-14i; max ampl. = 0.643734 Fixing e-field (band 8) phase by 5.93642e-12 + 1i; max ampl. = 0.465166 Fixing e-field (band 9) phase by 1 + -2.34459e-13i; max ampl. = 0.43823 Fixing e-field (band 10) phase by -3.91411e-14 + -1i; max ampl. = 0.518507 Fixing e-field (band 11) phase by -1 + -3.99059e-12i; max ampl. = 0.471405 Fixing e-field (band 12) phase by 1.63708e-13 + -1i; max ampl. = 0.443866 Outputting fields to test_line_defect-e.k05.b01.z.tm.h5... Outputting fields to test_line_defect-e.k05.b02.z.tm.h5... Outputting fields to test_line_defect-e.k05.b03.z.tm.h5... Outputting fields to test_line_defect-e.k05.b04.z.tm.h5... Outputting fields to test_line_defect-e.k05.b05.z.tm.h5... Outputting fields to test_line_defect-e.k05.b06.z.tm.h5... Outputting fields to test_line_defect-e.k05.b07.z.tm.h5... Outputting fields to test_line_defect-e.k05.b08.z.tm.h5... Outputting fields to test_line_defect-e.k05.b09.z.tm.h5... Outputting fields to test_line_defect-e.k05.b10.z.tm.h5... Outputting fields to test_line_defect-e.k05.b11.z.tm.h5... Outputting fields to test_line_defect-e.k05.b12.z.tm.h5... solve_kpoint (0.5,1.75,0): Solving for bands 1 to 6... Finished solving for bands 1 to 6 after 9 iterations. Solving for bands 7 to 12... Finished solving for bands 7 to 12 after 15 iterations. Finished k-point with 12 mean iterations/band. tmfreqs:, 6, 0.5, 1.75, 0, 0.5, 0.25635, 0.256978, 0.258342, 0.259571, 0.260868, 0.261719, 0.442498, 0.448263, 0.451495, 0.456403, 0.462907, 0.46569 elapsed time for k point: 1.61159610748 Fixing e-field (band 1) phase by 1 + -2.83004e-16i; max ampl. = 0.422882 Fixing e-field (band 2) phase by 2.64883e-12 + -1i; max ampl. = 0.466091 Fixing e-field (band 3) phase by -1 + 1.50972e-15i; max ampl. = 0.462198 Fixing e-field (band 4) phase by 1.71526e-11 + -1i; max ampl. = 0.471227 Fixing e-field (band 5) phase by -1 + 2.17573e-14i; max ampl. = 0.472309 Fixing e-field (band 6) phase by -2.67555e-11 + -1i; max ampl. = 0.476607 Fixing e-field (band 7) phase by 1 + -7.43436e-16i; max ampl. = 0.600013 Fixing e-field (band 8) phase by -4.02406e-13 + -1i; max ampl. = 0.468917 Fixing e-field (band 9) phase by 1 + 2.35869e-15i; max ampl. = 0.508553 Fixing e-field (band 10) phase by 1.69925e-13 + 1i; max ampl. = 0.472551 Fixing e-field (band 11) phase by 1 + 1.38605e-13i; max ampl. = 0.507635 Fixing e-field (band 12) phase by 1.92807e-12 + 1i; max ampl. = 0.465525 ..Outputting fields to test_line_defect-e.k06.b01.z.tm.h5... Outputting fields to test_line_defect-e.k06.b02.z.tm.h5... Outputting fields to test_line_defect-e.k06.b03.z.tm.h5... Outputting fields to test_line_defect-e.k06.b04.z.tm.h5... Outputting fields to test_line_defect-e.k06.b05.z.tm.h5... Outputting fields to test_line_defect-e.k06.b06.z.tm.h5... Outputting fields to test_line_defect-e.k06.b07.z.tm.h5... Outputting fields to test_line_defect-e.k06.b08.z.tm.h5... Outputting fields to test_line_defect-e.k06.b09.z.tm.h5... Outputting fields to test_line_defect-e.k06.b10.z.tm.h5... Outputting fields to test_line_defect-e.k06.b11.z.tm.h5... Outputting fields to test_line_defect-e.k06.b12.z.tm.h5... Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.256350105354 at Vector3<0.5, 1.75, 0.0> Band 2 range: 0.100888010145 at Vector3<0.0, 0.0, 0.0> to 0.256977671293 at Vector3<0.5, 1.75, 0.0> Band 3 range: 0.110543746169 at Vector3<0.0, 0.0, 0.0> to 0.258341879918 at Vector3<0.5, 1.75, 0.0> Band 4 range: 0.191437580989 at Vector3<0.0, 0.0, 0.0> to 0.25957071279 at Vector3<0.5, 1.75, 0.0> Band 5 range: 0.209077414374 at Vector3<0.0, 0.0, 0.0> to 0.264706957428 at Vector3<0.4, 1.4, 0.0> Band 6 range: 0.252768994808 at Vector3<0.0, 0.0, 0.0> to 0.270821263668 at Vector3<0.4, 1.4, 0.0> Band 7 range: 0.337337103113 at Vector3<0.0, 0.0, 0.0> to 0.442497664917 at Vector3<0.5, 1.75, 0.0> Band 8 range: 0.448262776554 at Vector3<0.5, 1.75, 0.0> to 0.468390327176 at Vector3<0.3, 1.05, 0.0> Band 9 range: 0.451495402953 at Vector3<0.5, 1.75, 0.0> to 0.471319483623 at Vector3<0.2, 0.7, 0.0> Band 10 range: 0.456402536778 at Vector3<0.5, 1.75, 0.0> to 0.496485088693 at Vector3<0.0, 0.0, 0.0> Band 11 range: 0.462906658043 at Vector3<0.5, 1.75, 0.0> to 0.499487769383 at Vector3<0.0, 0.0, 0.0> Band 12 range: 0.465690463972 at Vector3<0.5, 1.75, 0.0> to 0.545122984666 at Vector3<0.0, 0.0, 0.0> Gap from band 6 (0.270821263668) to band 7 (0.337337103113), 21.8745126527% Gap from band 7 (0.442497664917) to band 8 (0.448262776554), 1.2944247114% total elapsed time for run: 25.8142149448 done test_line_defect: 25.84s test_list_split ======================== test_list_split: 0.00s test_load_and_save_eigenvectors ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00553607940674 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.411260128021 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19572591782 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264662981033 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244037866592 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283306121826 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401262998581 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332328081131 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284447908401 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.24391579628 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234375 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232333898544 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18455696106 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214029073715 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292895078659 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343441009521 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.7267370224 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.89648485184 done Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00553297996521 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412327051163 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.1974439621 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264784097672 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244094848633 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283648014069 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401617050171 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332632064819 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.28476691246 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244115829468 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234514951706 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232439994812 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184751987457 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214141130447 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.29315495491 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343619823456 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 ./usr/lib/python2.7/dist-packages/scipy/optimize/_minimize.py:763: RuntimeWarning: Method 'bounded' does not support relative tolerance in x; defaulting to absolute tolerance. "defaulting to absolute tolerance.", RuntimeWarning) elapsed time for k point: 0.729009866714 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.90424513817 done test_load_and_save_eigenvectors: 11.81s test_maximize_first_tm_gap ======================== Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 7. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.252786, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00351595878601 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2 Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 16 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.457257 elapsed time for k point: 0.0183520317078 solve_kpoint (0.1,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 30 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0554835, 0.445338 elapsed time for k point: 0.0679359436035 solve_kpoint (0.2,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.108796, 0.4196 elapsed time for k point: 0.0213899612427 solve_kpoint (0.3,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.157121, 0.39009 elapsed time for k point: 0.0214929580688 solve_kpoint (0.4,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.195165, 0.36342 elapsed time for k point: 0.0191929340363 solve_kpoint (0.5,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.211216, 0.351201 elapsed time for k point: 0.0192019939423 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.214395, 0.356057 elapsed time for k point: 0.0192010402679 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.223034, 0.36912 elapsed time for k point: 0.0193748474121 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.234535, 0.38618 elapsed time for k point: 0.0191538333893 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.244797, 0.40104 elapsed time for k point: 0.021390914917 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.249029, 0.407058 elapsed time for k point: 0.0214757919312 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 17 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.239439, 0.402656 elapsed time for k point: 0.0388889312744 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.206339, 0.402028 elapsed time for k point: 0.0214099884033 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.149555, 0.416611 elapsed time for k point: 0.0214319229126 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0779669, 0.441244 elapsed time for k point: 0.0239682197571 solve_kpoint (0,0,0): Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 12 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.457257 elapsed time for k point: 0.0138771533966 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.249029499922 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.351200835305 at Vector3<0.5, 0.0, 0.0> to 0.45725652119 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.249029499922) to band 2 (0.351200835305), 34.0440425572% total elapsed time for run: 0.392333984375 done Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 7. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.347214, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00450110435486 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2 Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 17 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.364215 elapsed time for k point: 0.0194427967072 solve_kpoint (0.1,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 27 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0438278, 0.354242 elapsed time for k point: 0.0612618923187 solve_kpoint (0.2,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.086595, 0.330853 elapsed time for k point: 0.021476984024 solve_kpoint (0.3,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.126861, 0.302301 elapsed time for k point: 0.0214560031891 solve_kpoint (0.4,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.161288, 0.274456 elapsed time for k point: 0.0191769599915 solve_kpoint (0.5,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.177897, 0.259996 elapsed time for k point: 0.019110918045 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.18095, 0.263821 elapsed time for k point: 0.0191848278046 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.189456, 0.274239 elapsed time for k point: 0.0191669464111 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.201452, 0.288223 elapsed time for k point: 0.0191650390625 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.213244, 0.300912 elapsed time for k point: 0.0213370323181 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.218623, 0.306246 elapsed time for k point: 0.0213470458984 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 21 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.206544, 0.306507 elapsed time for k point: 0.0477080345154 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.171233, 0.314617 elapsed time for k point: 0.0213811397552 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.120346, 0.332539 elapsed time for k point: 0.0216670036316 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0617389, 0.353456 elapsed time for k point: 0.0214140415192 solve_kpoint (0,0,0): Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 13 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.364216 elapsed time for k point: 0.01491522789 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.218622569105 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.259996144375 at Vector3<0.5, 0.0, 0.0> to 0.364215520346 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.218622569105) to band 2 (0.259996144375), 17.2887411647% total elapsed time for run: 0.394777059555 done Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 7. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.194427, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00335597991943 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2 Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 20 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.546124 elapsed time for k point: 0.0226440429688 solve_kpoint (0.1,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 16 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0654224, 0.524701 elapsed time for k point: 0.0371968746185 solve_kpoint (0.2,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.128149, 0.494734 elapsed time for k point: 0.0242319107056 solve_kpoint (0.3,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.184564, 0.463719 elapsed time for k point: 0.0215139389038 solve_kpoint (0.4,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.228088, 0.436373 elapsed time for k point: 0.0192978382111 solve_kpoint (0.5,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.245908, 0.424115 elapsed time for k point: 0.0193450450897 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.249363, 0.43085 elapsed time for k point: 0.0192458629608 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.258652, 0.449323 elapsed time for k point: 0.0191950798035 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.270746, 0.474454 elapsed time for k point: 0.019318819046 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.281204, 0.497688 elapsed time for k point: 0.0214190483093 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.285404, 0.507621 elapsed time for k point: 0.0215120315552 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 17 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.275795, 0.495436 elapsed time for k point: 0.0390431880951 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.240471, 0.48197 elapsed time for k point: 0.0214190483093 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.175771, 0.489863 elapsed time for k point: 0.0236179828644 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 11 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0919053, 0.51638 elapsed time for k point: 0.0259039402008 solve_kpoint (0,0,0): Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 16 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.546124 elapsed time for k point: 0.0183348655701 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.285403810579 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.424115051619 at Vector3<0.5, 0.0, 0.0> to 0.546124486861 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.285403810579) to band 2 (0.424115051619), 39.1000855456% total elapsed time for run: 0.377660036087 done Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 7. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.161094, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00351500511169 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2 Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 14 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.550087 elapsed time for k point: 0.0162057876587 solve_kpoint (0.1,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0721945, 0.543799 elapsed time for k point: 0.0238049030304 solve_kpoint (0.2,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.141724, 0.526188 elapsed time for k point: 0.0236809253693 solve_kpoint (0.3,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.204809, 0.500698 elapsed time for k point: 0.0236239433289 solve_kpoint (0.4,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.254113, 0.474279 elapsed time for k point: 0.0214269161224 solve_kpoint (0.5,0,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.274582, 0.461512 elapsed time for k point: 0.0191931724548 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.278369, 0.469808 elapsed time for k point: 0.019140958786 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.288519, 0.493208 elapsed time for k point: 0.0194039344788 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 8 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.301662, 0.52732 elapsed time for k point: 0.0191190242767 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.312941, 0.563571 elapsed time for k point: 0.0236740112305 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.317444, 0.582278 elapsed time for k point: 0.0235280990601 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 17 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.307036, 0.555161 elapsed time for k point: 0.03928399086 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 9 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.267668, 0.5254 elapsed time for k point: 0.0214149951935 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.194886, 0.523918 elapsed time for k point: 0.0236618518829 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 10 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.101494, 0.539572 elapsed time for k point: 0.0237209796906 solve_kpoint (0,0,0): Solving for bands 2 to 2... Finished solving for bands 2 to 2 after 12 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.550087 .elapsed time for k point: 0.0139098167419 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.317444122972 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.4615121899 at Vector3<0.5, 0.0, 0.0> to 0.582277810582 at Vector3<0.5, 0.5, 0.0> Gap from band 1 (0.317444122972) to band 2 (0.4615121899), 36.9900248696% total elapsed time for run: 0.359371185303 done test_maximize_first_tm_gap: 1.53s test_multiply_bloch_in_map_data ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00537896156311 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.410926103592 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19568300247 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264810085297 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244014024734 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283348798752 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401082992554 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332463026047 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284550905228 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.243925094604 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234414100647 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232331991196 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18458199501 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214108943939 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292875051498 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343356847763 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.727267026901 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.89671587944 done Fixing e-field (band 8) phase by -2.58685e-07 + -1i; max ampl. = 1.10099 Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00559091567993 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412250995636 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19650816917 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264770030975 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244157075882 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283452033997 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401468038559 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332437992096 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284586906433 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.243996858597 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234524965286 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232367992401 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184625864029 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214072942734 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293005943298 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.34356212616 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.728994846344 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.9020409584 done Fixing e-field (band 8) phase by -2.58685e-07 + -1i; max ampl. = 1.10099 .test_multiply_bloch_in_map_data: 11.99s test_multiply_bloch_phase ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00545597076416 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.41094493866 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19580411911 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264621019363 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244015932083 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283357143402 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401178836823 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.33237195015 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284390926361 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.243892908096 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234414100647 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.23227596283 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184619903564 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.213971138 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292804002762 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343492984772 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.726819038391 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.8960621357 done Fixing e-field (band 8) phase by -2.58685e-07 + -1i; max ampl. = 1.10099 .test_multiply_bloch_phase: 5.90s test_output_charge_density ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00546312332153 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.410845041275 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19586801529 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264674186707 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244019031525 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283361911774 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401246070862 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332357883453 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284453868866 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.243927001953 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.23442196846 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232318162918 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184544086456 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.213992118835 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292914867401 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343483924866 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.726672172546 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.89618587494 done Fixing e-field (band 8) phase by -2.58685e-07 + -1i; max ampl. = 1.10099 .Outputting complex scalar field to test_output_charge_density-C.k16.b08.te.h5... test_output_charge_density: 5.91s test_output_dpwr_in_objects ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00556397438049 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.411515951157 D-energy-components:, 1, 1, 0, 0, 0 dpwr:, 1, 0.0, 0.0 D-energy-components:, 1, 2, 0.500003, 0.499997, 0 dpwr:, 2, 0.55270923201, 0.856743500004 Outputting fields to test_output_dpwr_in_objects-d.k01.b02.te.h5... D-energy-components:, 1, 3, 0.455928, 0.544072, 0 dpwr:, 3, 0.773226559307, 0.528826055797 D-energy-components:, 1, 4, 0.544076, 0.455924, 0 dpwr:, 4, 0.773229883948, 0.528807965491 D-energy-components:, 1, 5, 0.5, 0.5, 0 dpwr:, 5, 0.922996519585, 0.0891001079825 D-energy-components:, 1, 6, 0.125495, 0.874505, 0 dpwr:, 6, 1.00017111769, 0.40124649302 D-energy-components:, 1, 7, 0.874503, 0.125497, 0 dpwr:, 7, 1.00017200323, 0.401251991055 D-energy-components:, 1, 8, 0.499992, 0.500008, 0 dpwr:, 8, 1.09282093175, 0.287205668256 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19631481171 D-energy-components:, 2, 1, 0.031114, 0.968886, 0 dpwr:, 1, 0.089733226053, 0.0460316674094 D-energy-components:, 2, 2, 0.488088, 0.511912, 0 dpwr:, 2, 0.551137686974, 0.844554241847 D-energy-components:, 2, 3, 0.219526, 0.780474, 0 dpwr:, 3, 0.761599735559, 0.44273944445 D-energy-components:, 2, 4, 0.779994, 0.220006, 0 dpwr:, 4, 0.774682184615, 0.536749122895 D-energy-components:, 2, 5, 0.333449, 0.666551, 0 dpwr:, 5, 0.907198708641, 0.312018151458 D-energy-components:, 2, 6, 0.881419, 0.118581, 0 dpwr:, 6, 1.00187795294, 0.389133380378 D-energy-components:, 2, 7, 0.392233, 0.607767, 0 dpwr:, 7, 1.0035701587, 0.277620595933 D-energy-components:, 2, 8, 0.507954, 0.492046, 0 dpwr:, 8, 1.10209065116, 0.667649197634 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264684915543 D-energy-components:, 3, 1, 0.0363561, 0.963644, 0 dpwr:, 1, 0.178692004464, 0.0544220726491 D-energy-components:, 3, 2, 0.446363, 0.553637, 0 dpwr:, 2, 0.544895880278, 0.794273793676 D-energy-components:, 3, 3, 0.23103, 0.76897, 0 dpwr:, 3, 0.728533588468, 0.300771741151 D-energy-components:, 3, 4, 0.758854, 0.241146, 0 dpwr:, 4, 0.778527998755, 0.558660574036 D-energy-components:, 3, 5, 0.240477, 0.759523, 0 dpwr:, 5, 0.880243545608, 0.594165535364 D-energy-components:, 3, 6, 0.863785, 0.136215, 0 dpwr:, 6, 1.00698704194, 0.35472339077 D-energy-components:, 3, 7, 0.585239, 0.414761, 0 dpwr:, 7, 1.01696145336, 0.213224458514 D-energy-components:, 3, 8, 0.535346, 0.464654, 0 dpwr:, 8, 1.10027422003, 0.623265499249 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244179010391 D-energy-components:, 4, 1, 0.0468976, 0.953102, 0 dpwr:, 1, 0.265797606716, 0.0718902112932 D-energy-components:, 4, 2, 0.35602, 0.64398, 0 dpwr:, 2, 0.52817558089, 0.659679514896 D-energy-components:, 4, 3, 0.27068, 0.72932, 0 dpwr:, 3, 0.685449168526, 0.300542125303 D-energy-components:, 4, 4, 0.732284, 0.267716, 0 dpwr:, 4, 0.783377431812, 0.588066306618 D-energy-components:, 4, 5, 0.261431, 0.738569, 0 dpwr:, 5, 0.860714451483, 0.729558853134 D-energy-components:, 4, 6, 0.829353, 0.170647, 0 dpwr:, 6, 1.01515203043, 0.30554099773 D-energy-components:, 4, 7, 0.603026, 0.396974, 0 dpwr:, 7, 1.03843147349, 0.246738943319 D-energy-components:, 4, 8, 0.592482, 0.407518, 0 dpwr:, 8, 1.09663921497, 0.539665077017 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283405065536 D-energy-components:, 5, 1, 0.0662302, 0.93377, 0 dpwr:, 1, 0.348955949925, 0.103845244713 D-energy-components:, 5, 2, 0.226367, 0.773633, 0 dpwr:, 2, 0.490738447618, 0.435673954414 D-energy-components:, 5, 3, 0.351613, 0.648387, 0 dpwr:, 3, 0.652797447881, 0.448142512348 D-energy-components:, 5, 4, 0.710454, 0.289546, 0 dpwr:, 4, 0.787381631843, 0.613901176674 D-energy-components:, 5, 5, 0.295332, 0.704668, 0 dpwr:, 5, 0.849999314694, 0.769933890837 D-energy-components:, 5, 6, 0.77736, 0.22264, 0 dpwr:, 6, 1.02442946088, 0.257891195608 D-energy-components:, 5, 7, 0.546257, 0.453743, 0 dpwr:, 7, 1.06440766663, 0.332213139916 D-energy-components:, 5, 8, 0.681176, 0.318824, 0 dpwr:, 8, 1.09120806212, 0.432931740473 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401235103607 D-energy-components:, 6, 1, 0.0773009, 0.922699, 0 dpwr:, 1, 0.412790671266, 0.0860399780368 D-energy-components:, 6, 2, 0.165167, 0.834833, 0 dpwr:, 2, 0.441588449723, 0.35844848963 D-energy-components:, 6, 3, 0.391615, 0.608385, 0 dpwr:, 3, 0.641997736545, 0.532847316057 D-energy-components:, 6, 4, 0.702039, 0.297961, 0 dpwr:, 4, 0.788932989548, 0.624270449588 D-energy-components:, 6, 5, 0.308697, 0.691303, 0 dpwr:, 5, 0.846587869582, 0.777126317952 D-energy-components:, 6, 6, 0.742735, 0.257265, 0 dpwr:, 6, 1.02915970506, 0.236813593014 D-energy-components:, 6, 7, 0.350801, 0.649199, 0 dpwr:, 7, 1.08607293237, 0.578242860208 D-energy-components:, 6, 8, 0.737396, 0.262604, 0 dpwr:, 8, 1.08786896351, 0.379508210567 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332464933395 D-energy-components:, 7, 1, 0.12807, 0.87193, 0 dpwr:, 1, 0.423741461324, 0.0840529271046 D-energy-components:, 7, 2, 0.190236, 0.809764, 0 dpwr:, 2, 0.44578070371, 0.374902156438 D-energy-components:, 7, 3, 0.394034, 0.605966, 0 dpwr:, 3, 0.638230267338, 0.50822709514 D-energy-components:, 7, 4, 0.691881, 0.308119, 0 dpwr:, 4, 0.793146886182, 0.625150305316 D-energy-components:, 7, 5, 0.335703, 0.664297, 0 dpwr:, 5, 0.842943492239, 0.735577564469 D-energy-components:, 7, 6, 0.716117, 0.283883, 0 dpwr:, 6, 0.986523160918, 0.186978596967 D-energy-components:, 7, 7, 0.592896, 0.407104, 0 dpwr:, 7, 1.05017558172, 0.407776406607 D-energy-components:, 7, 8, 0.507261, 0.492739, 0 dpwr:, 8, 1.10383430973, 0.640481683228 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284536123276 D-energy-components:, 8, 1, 0.253956, 0.746044, 0 dpwr:, 1, 0.454781272515, 0.0802008373372 D-energy-components:, 8, 2, 0.258536, 0.741464, 0 dpwr:, 2, 0.457433976858, 0.42543224668 D-energy-components:, 8, 3, 0.39346, 0.60654, 0 dpwr:, 3, 0.627898416348, 0.438064799688 D-energy-components:, 8, 4, 0.668133, 0.331867, 0 dpwr:, 4, 0.805254151809, 0.623009425551 D-energy-components:, 8, 5, 0.454908, 0.545092, 0 dpwr:, 5, 0.826100668242, 0.537301542233 D-energy-components:, 8, 6, 0.562281, 0.437719, 0 dpwr:, 6, 0.927944859792, 0.352663649847 D-energy-components:, 8, 7, 0.614808, 0.385192, 0 dpwr:, 7, 1.00456285223, 0.420738993786 D-energy-components:, 8, 8, 0.497393, 0.502607, 0 dpwr:, 8, 1.10879255432, 0.727971767229 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.24395108223 D-energy-components:, 9, 1, 0.353246, 0.646754, 0 dpwr:, 1, 0.473766595936, 0.512582772213 D-energy-components:, 9, 2, 0.406264, 0.593736, 0 dpwr:, 2, 0.501278842947, 0.0794647802808 D-energy-components:, 9, 3, 0.37582, 0.62418, 0 dpwr:, 3, 0.613580175747, 0.328811623704 D-energy-components:, 9, 4, 0.604014, 0.395986, 0 dpwr:, 4, 0.781466869324, 0.223273226444 D-energy-components:, 9, 5, 0.642263, 0.357737, 0 dpwr:, 5, 0.82418144435, 0.609569504797 D-energy-components:, 9, 6, 0.357719, 0.642281, 0 dpwr:, 6, 0.894949213966, 0.654028638341 D-energy-components:, 9, 7, 0.617321, 0.382679, 0 dpwr:, 7, 0.959051157213, 0.461890586076 D-energy-components:, 9, 8, 0.497742, 0.502258, 0 dpwr:, 8, 1.11069781522, 0.761549817162 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234460115433 D-energy-components:, 10, 1, 0.450645, 0.549355, 0 dpwr:, 1, 0.48964920033, 0.628546937161 D-energy-components:, 10, 2, 0.55965, 0.44035, 0 dpwr:, 2, 0.55604513436, 0.0903499596303 D-energy-components:, 10, 3, 0.336621, 0.663379, 0 dpwr:, 3, 0.599569940521, 0.195978061829 D-energy-components:, 10, 4, 0.593365, 0.406635, 0 dpwr:, 4, 0.719610675514, 0.0828904269154 D-energy-components:, 10, 5, 0.620299, 0.379701, 0 dpwr:, 5, 0.849246796726, 0.577797196956 D-energy-components:, 10, 6, 0.283543, 0.716457, 0 dpwr:, 6, 0.884337377178, 0.777298614918 D-energy-components:, 10, 7, 0.618314, 0.381686, 0 dpwr:, 7, 0.917167505771, 0.515986302512 D-energy-components:, 10, 8, 0.499316, 0.500684, 0 dpwr:, 8, 1.11162105754, 0.775661103268 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232377052307 D-energy-components:, 11, 1, 0.500002, 0.499998, 0 dpwr:, 1, 0.496835864745, 0.698636026235 D-energy-components:, 11, 2, 0.490408, 0.509592, 0 dpwr:, 2, 0.593140514116, 0.119658617868 D-energy-components:, 11, 3, 0.509591, 0.490409, 0 dpwr:, 3, 0.593153586312, 0.119542183082 D-energy-components:, 11, 4, 0.499999, 0.500001, 0 dpwr:, 4, 0.679169013076, 0.0266333797198 D-energy-components:, 11, 5, 0.5, 0.5, 0 dpwr:, 5, 0.87868381416, 0.299749762284 D-energy-components:, 11, 6, 0.362, 0.638, 0 dpwr:, 6, 0.881977091666, 0.802356842474 D-energy-components:, 11, 7, 0.638005, 0.361995, 0 dpwr:, 7, 0.881981813442, 0.802381635726 D-energy-components:, 11, 8, 0.499999, 0.500001, 0 dpwr:, 8, 1.11191737076, 0.779738140871 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184669971466 D-energy-components:, 12, 1, 0.500001, 0.499999, 0 dpwr:, 1, 0.470986895443, 0.41845731018 D-energy-components:, 12, 2, 0.5, 0.5, 0 dpwr:, 2, 0.546002648834, 0.365895885714 D-energy-components:, 12, 3, 0.5, 0.5, 0 dpwr:, 3, 0.606732333636, 0.125606152044 D-energy-components:, 12, 4, 0.499999, 0.500001, 0 dpwr:, 4, 0.743602191048, 0.112952315443 D-energy-components:, 12, 5, 0.499995, 0.500005, 0 dpwr:, 5, 0.839222595132, 0.57385055981 D-energy-components:, 12, 6, 0.500004, 0.499996, 0 dpwr:, 6, 0.882253939189, 0.79040207205 D-energy-components:, 12, 7, 0.500006, 0.499994, 0 dpwr:, 7, 0.936970096199, 0.481849895504 D-energy-components:, 12, 8, 0.499999, 0.500001, 0 dpwr:, 8, 1.1112079238, 0.770610082842 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214047193527 D-energy-components:, 13, 1, 0.499999, 0.500001, 0 dpwr:, 1, 0.372434676913, 0.122374083381 D-energy-components:, 13, 2, 0.500002, 0.499998, 0 dpwr:, 2, 0.536186288439, 0.676932734099 D-energy-components:, 13, 3, 0.5, 0.5, 0 dpwr:, 3, 0.644572317821, 0.150556445009 D-energy-components:, 13, 4, 0.499998, 0.500002, 0 dpwr:, 4, 0.809689155168, 0.556241164988 D-energy-components:, 13, 5, 0.499996, 0.500004, 0 dpwr:, 5, 0.825804393421, 0.246435002455 D-energy-components:, 13, 6, 0.500008, 0.499992, 0 dpwr:, 6, 0.883642304216, 0.747114172854 D-energy-components:, 13, 7, 0.5, 0.5, 0 dpwr:, 7, 1.01020321733, 0.380746988678 D-energy-components:, 13, 8, 0.5, 0.5, 0 dpwr:, 8, 1.10725147199, 0.723618303234 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292905807495 D-energy-components:, 14, 1, 0.499999, 0.500001, 0 dpwr:, 1, 0.252088096229, 0.0653722298874 D-energy-components:, 14, 2, 0.500003, 0.499997, 0 dpwr:, 2, 0.542887135721, 0.776089779269 D-energy-components:, 14, 3, 0.500001, 0.499999, 0 dpwr:, 3, 0.698081067031, 0.220962166985 D-energy-components:, 14, 4, 0.5, 0.5, 0 dpwr:, 4, 0.789371358052, 0.554918109128 D-energy-components:, 14, 5, 0.499969, 0.500031, 0 dpwr:, 5, 0.888482610264, 0.640566079856 D-energy-components:, 14, 6, 0.500033, 0.499967, 0 dpwr:, 6, 0.897857870041, 0.316226295357 D-energy-components:, 14, 7, 0.499994, 0.500006, 0 dpwr:, 7, 1.07884134083, 0.465228561899 D-energy-components:, 14, 8, 0.500005, 0.499995, 0 dpwr:, 8, 1.09038564588, 0.546286148842 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343540906906 D-energy-components:, 15, 1, 0.499999, 0.500001, 0 dpwr:, 1, 0.126841069035, 0.0479527977041 D-energy-components:, 15, 2, 0.500003, 0.499997, 0 dpwr:, 2, 0.54990750729, 0.835061478072 D-energy-components:, 15, 3, 0.499999, 0.500001, 0 dpwr:, 3, 0.750377710062, 0.387029560373 D-energy-components:, 15, 4, 0.500004, 0.499996, 0 dpwr:, 4, 0.777260850887, 0.536947533714 D-energy-components:, 15, 5, 0.499997, 0.500003, 0 dpwr:, 5, 0.903059013493, 0.390621313084 D-energy-components:, 15, 6, 0.500003, 0.499997, 0 dpwr:, 6, 0.961984414335, 0.364042303197 D-energy-components:, 15, 7, 0.500001, 0.499999, 0 dpwr:, 7, 1.04190649727, 0.322910845377 D-energy-components:, 15, 8, 0.499999, 0.500001, 0 dpwr:, 8, 1.10003674479, 0.6489227097 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.727162837982 D-energy-components:, 16, 1, 0, 0, 0 dpwr:, 1, 0.0, 0.0 D-energy-components:, 16, 2, 0.500003, 0.499997, 0 dpwr:, 2, 0.55270923201, 0.856743464223 Outputting fields to test_output_dpwr_in_objects-d.k16.b02.te.h5... D-energy-components:, 16, 3, 0.455928, 0.544072, 0 dpwr:, 3, 0.773226559307, 0.528826082855 D-energy-components:, 16, 4, 0.544076, 0.455924, 0 dpwr:, 4, 0.773229883948, 0.528807968569 D-energy-components:, 16, 5, 0.5, 0.5, 0 dpwr:, 5, 0.922996519586, 0.0891005441649 D-energy-components:, 16, 6, 0.125495, 0.874505, 0 dpwr:, 6, 1.00017111769, 0.401246629326 D-energy-components:, 16, 7, 0.874503, 0.125497, 0 dpwr:, 7, 1.00017200323, 0.401252017686 D-energy-components:, 16, 8, 0.499991, 0.500009, 0 .dpwr:, 8, 1.09282093175, 0.287205379086 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 6.02757978439 done test_output_dpwr_in_objects: 6.03s test_output_efield_z ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.0054190158844 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 61 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.546027, 0.552094, 0.552096, 0.812093, 0.854314, 0.951107, 1.08259 elapsed time for k point: 0.484477043152 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0643671, 0.518896, 0.552617, 0.579095, 0.812721, 0.852958, 0.941428, 1.04995 elapsed time for k point: 0.235311031342 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.126061, 0.48795, 0.553991, 0.610359, 0.812384, 0.849484, 0.912816, 1.02959 elapsed time for k point: 0.135766983032 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.181523, 0.45665, 0.555709, 0.644685, 0.802314, 0.845326, 0.880698, 1.025 elapsed time for k point: 0.136034965515 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.224302, 0.429317, 0.557116, 0.682524, 0.772176, 0.842059, 0.865404, 1.0269 elapsed time for k point: 0.135316133499 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.241821, 0.417114, 0.557658, 0.713395, 0.741311, 0.84083, 0.862516, 1.02856 elapsed time for k point: 0.135419130325 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.245235, 0.4236, 0.551085, 0.711571, 0.749855, 0.841982, 0.862609, 1.01714 elapsed time for k point: 0.126329898834 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 11 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.25442, 0.441321, 0.535034, 0.706018, 0.772267, 0.845818, 0.862861, 0.989395 elapsed time for k point: 0.115724086761 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.266397, 0.465222, 0.516482, 0.697068, 0.802974, 0.853388, 0.863228, 0.954203 elapsed time for k point: 0.12527012825 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.276774, 0.48701, 0.501823, 0.687264, 0.837704, 0.86397, 0.865932, 0.916273 elapsed time for k point: 0.145625114441 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.280948, 0.496196, 0.496197, 0.682617, 0.859474, 0.878316, 0.878316, 0.879351 elapsed time for k point: 0.155616044998 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.27141, 0.485365, 0.501693, 0.689111, 0.830636, 0.844978, 0.893706, 0.898991 elapsed time for k point: 0.166118144989 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.236529, 0.473888, 0.515941, 0.679199, 0.819377, 0.829518, 0.897603, 0.933446 elapsed time for k point: 0.125746965408 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.172884, 0.482973, 0.533242, 0.640233, 0.819202, 0.838111, 0.910409, 0.976551 elapsed time for k point: 0.12529706955 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0904174, 0.510404, 0.546943, 0.593803, 0.81373, 0.851132, 0.935551, 1.02882 elapsed time for k point: 0.145661830902 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 59 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.546027, 0.552094, 0.552096, 0.812093, 0.854314, 0.951107, 1.08259 elapsed time for k point: 0.469697952271 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.280947953525 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.417114249325 at Vector3<0.5, 0.0, 0.0> to 0.546026779337 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.496197452765 at Vector3<0.5, 0.5, 0.0> to 0.557657636298 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.552095586454 at Vector3<0.0, 0.0, 0.0> to 0.713395151642 at Vector3<0.5, 0.0, 0.0> Band 5 range: 0.741310965707 at Vector3<0.5, 0.0, 0.0> to 0.859474106957 at Vector3<0.5, 0.5, 0.0> Band 6 range: 0.829517615025 at Vector3<0.3, 0.3, 0.0> to 0.878315547346 at Vector3<0.5, 0.5, 0.0> Band 7 range: 0.862515905381 at Vector3<0.5, 0.0, 0.0> to 0.951107453906 at Vector3<0.0, 0.0, 0.0> Band 8 range: 0.879351095829 at Vector3<0.5, 0.5, 0.0> to 1.08259238415 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.280947953525) to band 2 (0.417114249325), 39.0126539564% Gap from band 4 (0.713395151642) to band 5 (0.741310965707), 3.83800050492% total elapsed time for run: 2.97052192688 done Fixing e-field (band 8) phase by -2.55726e-08 + 1i; max ampl. = 1.49941 FOutputting fields to test_output_efield_z-e.k16.b08.z.tm.h5... test_output_efield_z: 2.99s test_output_field_to_file ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.0054919719696 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.411490917206 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19636893272 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264797210693 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244122982025 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283470153809 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401376962662 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332427978516 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284559011459 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.243941068649 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234581947327 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232397079468 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184652090073 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214049100876 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292973041534 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343496799469 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.727570056915 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.8993999958 done epsilon: 1-12, mean 2.38229, harm. mean 1.1448, 14.5508% > 1, 12.5663% "fill" .Outputting test_output_field_to_file-epsilon.h5... test_output_field_to_file: 5.94s test_output_tot_pwr ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00547289848328 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.411143064499 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19593191147 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264645814896 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244012832642 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283402919769 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401257991791 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.3322930336 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284468173981 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.243860960007 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234382867813 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232309103012 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184571027756 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214000940323 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.292901992798 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.34346985817 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.727105140686 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.89687013626 done D-energy-components:, 16, 8, 0.499991, 0.500009, 0 B-energy-components:, 16, 8, 0, 0, 1 Outputting test_output_tot_pwr-tot.rpwr.k16.b08.te.h5... D-energy-components:, 16, 8, 0.499991, 0.500009, 0 B-energy-components:, 16, 8, 0, 0, 1 .test_output_tot_pwr: 5.91s test_point_defect_state ======================== Initializing eigensolver data Computing 50 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 10 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 33 object nodes (vs. 26 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.132709980011 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8, tm band 9, tm band 10, tm band 11, tm band 12, tm band 13, tm band 14, tm band 15, tm band 16, tm band 17, tm band 18, tm band 19, tm band 20, tm band 21, tm band 22, tm band 23, tm band 24, tm band 25, tm band 26, tm band 27, tm band 28, tm band 29, tm band 30, tm band 31, tm band 32, tm band 33, tm band 34, tm band 35, tm band 36, tm band 37, tm band 38, tm band 39, tm band 40, tm band 41, tm band 42, tm band 43, tm band 44, tm band 45, tm band 46, tm band 47, tm band 48, tm band 49, tm band 50 Solving for bands 1 to 10... iteration 39: trace = 0.2502955070286826 (1.2819e-11% change) Finished solving for bands 1 to 10 after 39 iterations. Solving for bands 11 to 20... Finished solving for bands 11 to 20 after 28 iterations. Solving for bands 21 to 30... iteration 27: trace = 1.368752119510966 (0.000249198% change) iteration 54: trace = 1.368741980014565 (3.28446e-05% change) iteration 81: trace = 1.368731195121059 (1.27228e-07% change) iteration 108: trace = 1.368731049042095 (5.16482e-09% change) iteration 135: trace = 1.368730827103734 (2.7273e-07% change) iteration 162: trace = 1.368730794447296 (2.25095e-07% change) Finished solving for bands 21 to 30 after 175 iterations. Solving for bands 31 to 40... iteration 24: trace = 2.150426791316375 (0.000943326% change) iteration 49: trace = 2.150313290593447 (5.19901e-06% change) iteration 74: trace = 2.150313167849483 (4.93685e-09% change) Finished solving for bands 31 to 40 after 94 iterations. Solving for bands 41 to 50... iteration 23: trace = 2.434289946523944 (0.00411676% change) iteration 46: trace = 2.434024326949157 (3.04634e-07% change) Finished solving for bands 41 to 50 after 65 iterations. Finished k-point with 80.2 mean iterations/band. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.0904454, 0.0904609, 0.0904609, 0.0944816, 0.190067, 0.190067, 0.190067, 0.190068, 0.19007, 0.190245, 0.190245, 0.203237, 0.237196, 0.237298, 0.237298, 0.240872, 0.246066, 0.246066, 0.246066, 0.257408, 0.267453, 0.26748, 0.26748, 0.279812, 0.3773, 0.423294, 0.423305, 0.426098, 0.426099, 0.460406, 0.460406, 0.460407, 0.460423, 0.460426, 0.46271, 0.462711, 0.465484, 0.465538, 0.469456, 0.469457, 0.469856, 0.474575, 0.480164, 0.480164, 0.490505, 0.499359, 0.49936, 0.511689, 0.51273, 0.51273 elapsed time for k point: 61.6544508934 total elapsed time for run: 61.7880349159 done Fixing e-field (band 25) phase by 0.243925 + 0.969794i; max ampl. = 0.816569 Outputting fields to test_point_defect_state-e.k01.b25.z.tm.h5... Fixing d-field (band 25) phase by -1 + 2.62349e-07i; max ampl. = 3.30563 D-energy-components:, 1, 25, 0, 0, 1 Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 33 object nodes (vs. 26 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0226600170135 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 159 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.3773 elapsed time for k point: 2.18650197983 total elapsed time for run: 2.20931816101 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0211699008942 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 159 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.3773 elapsed time for k point: 2.14787101746 total elapsed time for run: 2.16914892197 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0211799144745 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 187 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.282209 elapsed time for k point: 2.55209589005 total elapsed time for run: 2.57337594032 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0211639404297 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 144 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.301374 elapsed time for k point: 1.94665288925 total elapsed time for run: 1.96791410446 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0210189819336 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 130 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.317732 elapsed time for k point: 1.77701592445 total elapsed time for run: 1.79812598228 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0210881233215 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 142 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.308953 elapsed time for k point: 1.91960692406 total elapsed time for run: 1.94078707695 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0210161209106 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 139 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.314172 elapsed time for k point: 1.90069913864 total elapsed time for run: 1.92180395126 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0210559368134 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 138 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.311508 elapsed time for k point: 1.86567783356 total elapsed time for run: 1.88682794571 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0210359096527 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 139 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.314159 elapsed time for k point: 1.90073204041 total elapsed time for run: 1.92185688019 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0209729671478 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 136 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.31282 elapsed time for k point: 1.8386361599 total elapsed time for run: 1.85969495773 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.020956993103 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 139 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.314159 elapsed time for k point: 1.89953994751 total elapsed time for run: 1.92058706284 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0210230350494 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 145 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.313486 elapsed time for k point: 1.96012616158 total elapsed time for run: 1.98123693466 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0209980010986 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 139 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.314159 elapsed time for k point: 1.90077114105 total elapsed time for run: 1.92190289497 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0213589668274 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 138 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.313822 elapsed time for k point: 1.86603593826 total elapsed time for run: 1.88750290871 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0211431980133 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 139 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.314159 elapsed time for k point: 1.90005898476 total elapsed time for run: 1.92129993439 done Initializing eigensolver data Computing 1 bands with 1e-08 tolerance Target frequency is 0.3493 Working in 2 dimensions. Grid size is 80 x 80 x 1. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (5, 0, 0) (0, 5, 0) (0, 0, 1) Cell volume = 25 Reciprocal lattice vectors (/ 2 pi): (0.2, -0, 0) (-0, 0.2, -0) (0, -0, 1) Geometric objects: cylinder, center = (2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-1,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-1,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (-2,-2,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 5 and 34 object nodes (vs. 27 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 1 k-points Vector3<0.5, 0.5, 0.0> elapsed time for initialization: 0.0211498737335 solve_kpoint (0.5,0.5,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 139 iterations. tmfreqs:, 1, 0.5, 0.5, 0, 0.141421, 0.314159 .elapsed time for k point: 1.8795940876 total elapsed time for run: 1.9008409977 done test_point_defect_state: 93.62s test_poynting ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.0054919719696 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.413290977478 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19825291634 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265311002731 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.245007038116 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.284021139145 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.40222287178 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.33311009407 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.285114049911 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244450807571 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234920978546 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232809066772 Outputting fields to test_poynting-flux.v.k11.b01.te.h5... Outputting fields to test_poynting-flux.v.k11.b02.te.h5... Outputting fields to test_poynting-flux.v.k11.b03.te.h5... Outputting fields to test_poynting-flux.v.k11.b04.te.h5... Outputting fields to test_poynting-flux.v.k11.b05.te.h5... Outputting fields to test_poynting-flux.v.k11.b06.te.h5... Outputting fields to test_poynting-flux.v.k11.b07.te.h5... Outputting fields to test_poynting-flux.v.k11.b08.te.h5... solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.185213088989 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214551925659 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.29363822937 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344212055206 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 ..elapsed time for k point: 0.730787992477 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 6.4215760231 done test_poynting: 6.44s test_resolution ======================== test_resolution: 0.00s test_run_te ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00547790527344 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.412955999374 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19782090187 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265177965164 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244394779205 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283874988556 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.402158021927 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332792043686 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.28516793251 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244368076324 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.235023975372 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232701063156 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184871196747 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214354038239 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293421030045 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343952894211 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 .elapsed time for k point: 0.730266094208 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.91041707993 done test_run_te: 5.91s test_run_te_no_geometry ======================== Initializing eigensolver data Computing 8 bands with 1e-07 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: Geometric object tree has depth 1 and 0 object nodes (vs. 0 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.0041618347168 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 8 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1.41421, 1.41421, 1.41421 elapsed time for k point: 0.0685369968414 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 2 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.1, 0.9, 1.00499, 1.00499, 1.1, 1.34536, 1.34536, 1.48661 elapsed time for k point: 0.027006149292 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.2, 0.8, 1.0198, 1.0198, 1.2, 1.28062, 1.28062, 1.56205 elapsed time for k point: 0.0169579982758 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.3, 0.7, 1.04403, 1.04403, 1.22066, 1.22066, 1.3, 1.64012 elapsed time for k point: 0.0169680118561 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.4, 0.6, 1.07703, 1.07703, 1.16619, 1.16619, 1.4, 1.72047 elapsed time for k point: 0.0169351100922 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.5, 0.5, 1.11803, 1.11803, 1.11803, 1.11803, 1.5, 1.80278 elapsed time for k point: 0.0169358253479 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 2 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.509902, 0.509902, 1.02956, 1.02956, 1.2083, 1.2083, 1.50333, 1.74929 elapsed time for k point: 0.0269210338593 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 2 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.538516, 0.566775, 0.956971, 0.9598, 1.3061, 1.30974, 1.52004, 1.59611 elapsed time for k point: 0.027006149292 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 8 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.583095, 0.583095, 0.860233, 0.860233, 1.39284, 1.39284, 1.52971, 1.52971 elapsed time for k point: 0.0857059955597 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.640312, 0.640312, 0.781025, 0.781025, 1.48661, 1.48661, 1.55242, 1.55242 elapsed time for k point: 0.0169579982758 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.707107, 0.707107, 0.707107, 0.707107, 1.58114, 1.58114, 1.58114, 1.58114 elapsed time for k point: 0.0169599056244 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 77 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.565685, 0.72111, 0.72111, 0.848528, 1.45602, 1.45602, 1.52315, 1.52315 elapsed time for k point: 0.761814832687 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.424264, 0.761577, 0.761577, 0.989949, 1.33417, 1.33417, 1.47648, 1.47648 elapsed time for k point: 0.0169529914856 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.282843, 0.824621, 0.824621, 1.13137, 1.21655, 1.21655, 1.44222, 1.44222 elapsed time for k point: 0.0169730186462 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 1 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.141421, 0.905539, 0.905539, 1.10454, 1.10454, 1.27279, 1.42127, 1.42127 elapsed time for k point: 0.0169560909271 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 1 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1.41421, 1.41421, 1.41421 .elapsed time for k point: 0.0136368274689 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.707106781187 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.500000000035 at Vector3<0.5, 0.0, 0.0> to 1.00000000005 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.707106781188 at Vector3<0.5, 0.5, 0.0> to 1.11803398876 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.70710678119 at Vector3<0.5, 0.5, 0.0> to 1.13137084993 at Vector3<0.2, 0.2, 0.0> Band 5 range: 1.0 at Vector3<0.0, 0.0, 0.0> to 1.58113883008 at Vector3<0.5, 0.5, 0.0> Band 6 range: 1.11803398877 at Vector3<0.5, 0.0, 0.0> to 1.58113883009 at Vector3<0.5, 0.5, 0.0> Band 7 range: 1.28062484752 at Vector3<0.2, 0.0, 0.0> to 1.58113883009 at Vector3<0.5, 0.5, 0.0> Band 8 range: 1.41421356238 at Vector3<0.0, 0.0, 0.0> to 1.80277563765 at Vector3<0.5, 0.0, 0.0> total elapsed time for run: 1.16894102097 done test_run_te_no_geometry: 1.17s test_run_te_with_mu_material ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Initializing mu function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00731801986694 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 204 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.669987, 0.783178, 0.78318, 0.965522, 1.18154, 1.18154, 1.20597 elapsed time for k point: 3.24989414215 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 154 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0813996, 0.654814, 0.784954, 0.787051, 0.973107, 1.147, 1.15475, 1.23489 elapsed time for k point: 3.07455396652 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 109 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.161634, 0.615231, 0.789764, 0.798457, 0.982219, 1.11674, 1.12242, 1.27406 elapsed time for k point: 2.1807808876 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 98 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.238847, 0.561888, 0.796082, 0.816438, 0.967926, 1.09564, 1.12526, 1.31351 elapsed time for k point: 1.96416711807 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... iteration 202: trace = 6.680332240139559 (0.000784109% change) Finished solving for bands 1 to 8 after 279 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.307852, 0.505558, 0.80155, 0.837884, 0.938877, 1.07767, 1.16248, 1.26133 elapsed time for k point: 5.55340003967 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 77 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.344122, 0.473282, 0.803737, 0.850595, 0.922321, 1.07128, 1.20345, 1.21829 elapsed time for k point: 1.54412293434 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 87 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.349806, 0.482366, 0.768987, 0.886345, 0.90475, 1.06612, 1.21866, 1.22114 elapsed time for k point: 1.74260306358 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 102 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.365505, 0.508431, 0.720714, 0.859475, 0.938003, 1.05964, 1.21894, 1.25305 elapsed time for k point: 2.04080796242 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 123 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.387171, 0.548256, 0.676549, 0.800668, 0.989113, 1.05673, 1.21445, 1.27327 elapsed time for k point: 2.45650696754 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... iteration 202: trace = 6.656558117265936 (0.00523618% change) Finished solving for bands 1 to 8 after 328 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.407624, 0.596325, 0.643243, 0.739976, 1.03397, 1.05588, 1.19281, 1.24454 elapsed time for k point: 6.51629209518 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 69 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.416529, 0.630179, 0.63018, 0.701793, 1.05575, 1.05575, 1.17509, 1.24128 elapsed time for k point: 1.38732409477 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 99 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.39535, 0.591668, 0.641198, 0.766761, 1.02252, 1.04927, 1.20755, 1.24532 elapsed time for k point: 1.98251104355 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 127 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.326025, 0.580731, 0.672069, 0.852808, 0.974388, 1.03211, 1.23516, 1.24808 elapsed time for k point: 2.53616595268 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 106 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.226064, 0.606225, 0.716276, 0.861027, 1.00531, 1.00779, 1.22714, 1.22782 elapsed time for k point: 2.11910390854 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 126 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.114855, 0.645572, 0.76138, 0.812, 0.980404, 1.09879, 1.19545, 1.21663 elapsed time for k point: 2.51878285408 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 132 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.669987, 0.783178, 0.78318, 0.965522, 1.18154, 1.18154, 1.20597 elapsed time for k point: 2.10451292992 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.416529123304 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.473282323487 at Vector3<0.5, 0.0, 0.0> to 0.669986728129 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.630180264682 at Vector3<0.5, 0.5, 0.0> to 0.803736532303 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.701793255698 at Vector3<0.5, 0.5, 0.0> to 0.886344816771 at Vector3<0.5, 0.1, 0.0> Band 5 range: 0.904749848581 at Vector3<0.5, 0.1, 0.0> to 1.0557468193 at Vector3<0.5, 0.5, 0.0> Band 6 range: 1.00779256061 at Vector3<0.2, 0.2, 0.0> to 1.18154037443 at Vector3<0.0, 0.0, 0.0> Band 7 range: 1.12242425197 at Vector3<0.2, 0.0, 0.0> to 1.23515676792 at Vector3<0.3, 0.3, 0.0> Band 8 range: 1.20597286367 at Vector3<0.0, 0.0, 0.0> to 1.31350625236 at Vector3<0.3, 0.0, 0.0> Gap from band 1 (0.416529123304) to band 2 (0.473282323487), 12.7562306348% Gap from band 4 (0.886344816771) to band 5 (0.904749848581), 2.05517130568% total elapsed time for run: 42.9805550575 done mu: 1-5, mean 1.50265, harm. mean 1.12084, 14.5508% > 1, 12.5663% "fill" Outputting test_run_te_with_mu_material-mu.h5... mu: 1-5, mean 1.50265, harm. mean 1.12084, 14.5508% > 1, 12.5663% "fill" .test_run_te_with_mu_material: 43.00s test_run_tm ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00560688972473 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 61 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.546027, 0.552094, 0.552096, 0.812093, 0.854314, 0.951107, 1.08259 elapsed time for k point: 0.485871076584 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0643671, 0.518896, 0.552617, 0.579095, 0.812721, 0.852958, 0.941428, 1.04995 elapsed time for k point: 0.234973907471 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.126061, 0.48795, 0.553991, 0.610359, 0.812384, 0.849484, 0.912816, 1.02959 elapsed time for k point: 0.134983778 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.181523, 0.45665, 0.555709, 0.644685, 0.802314, 0.845326, 0.880698, 1.025 elapsed time for k point: 0.135806798935 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.224302, 0.429317, 0.557116, 0.682524, 0.772176, 0.842059, 0.865404, 1.0269 elapsed time for k point: 0.135060071945 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.241821, 0.417114, 0.557658, 0.713395, 0.741311, 0.84083, 0.862516, 1.02856 elapsed time for k point: 0.135119199753 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.245235, 0.4236, 0.551085, 0.711571, 0.749855, 0.841982, 0.862609, 1.01714 elapsed time for k point: 0.126116991043 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 11 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.25442, 0.441321, 0.535034, 0.706018, 0.772267, 0.845818, 0.862861, 0.989395 elapsed time for k point: 0.115524053574 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.266397, 0.465222, 0.516482, 0.697068, 0.802974, 0.853388, 0.863228, 0.954203 elapsed time for k point: 0.125074148178 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.276774, 0.48701, 0.501823, 0.687264, 0.837704, 0.86397, 0.865932, 0.916273 elapsed time for k point: 0.145297050476 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.280948, 0.496196, 0.496197, 0.682617, 0.859474, 0.878316, 0.878316, 0.879351 elapsed time for k point: 0.155342102051 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.27141, 0.485365, 0.501693, 0.689111, 0.830636, 0.844978, 0.893706, 0.898991 elapsed time for k point: 0.165783882141 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.236529, 0.473888, 0.515941, 0.679199, 0.819377, 0.829518, 0.897603, 0.933446 elapsed time for k point: 0.12547492981 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.172884, 0.482973, 0.533242, 0.640233, 0.819202, 0.838111, 0.910409, 0.976551 elapsed time for k point: 0.125123977661 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0904174, 0.510404, 0.546943, 0.593803, 0.81373, 0.851132, 0.935551, 1.02882 elapsed time for k point: 0.145411968231 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 59 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.546027, 0.552094, 0.552096, 0.812093, 0.854314, 0.951107, 1.08259 .elapsed time for k point: 0.471092939377 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.280947953525 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.417114249325 at Vector3<0.5, 0.0, 0.0> to 0.546026779337 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.496197452765 at Vector3<0.5, 0.5, 0.0> to 0.557657636298 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.552095586454 at Vector3<0.0, 0.0, 0.0> to 0.713395151642 at Vector3<0.5, 0.0, 0.0> Band 5 range: 0.741310965707 at Vector3<0.5, 0.0, 0.0> to 0.859474106957 at Vector3<0.5, 0.5, 0.0> Band 6 range: 0.829517615025 at Vector3<0.3, 0.3, 0.0> to 0.878315547346 at Vector3<0.5, 0.5, 0.0> Band 7 range: 0.862515905381 at Vector3<0.5, 0.0, 0.0> to 0.951107453906 at Vector3<0.0, 0.0, 0.0> Band 8 range: 0.879351095829 at Vector3<0.5, 0.5, 0.0> to 1.08259238415 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.280947953525) to band 2 (0.417114249325), 39.0126539564% Gap from band 4 (0.713395151642) to band 5 (0.741310965707), 3.83800050492% total elapsed time for run: 2.96930789948 done test_run_tm: 2.97s test_set_eigenvectors ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00537014007568 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.413419961929 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.197671175 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265002012253 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244446992874 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.2838139534 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401856899261 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332882881165 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284847021103 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244289875031 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234849214554 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232713937759 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184957027435 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214303016663 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293344974518 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.343938112259 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.731150865555 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.9104449749 done Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00549602508545 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.411553144455 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19821596146 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.265059947968 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244467020035 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.284149169922 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.4020819664 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.333057880402 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.284909963608 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.244421958923 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234890937805 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232706069946 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.18493103981 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214457988739 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293518066406 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.344108104706 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.727852106094 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.90752315521 done Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00539207458496 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.41321516037 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.19823002815 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.264946937561 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.244535923004 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.283884048462 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.401566982269 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.332895040512 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.285043954849 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.24424290657 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.234820842743 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.232740879059 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.184854030609 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.214366197586 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.293307065964 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.34387588501 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 .elapsed time for k point: 0.730653047562 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.91017103195 done test_set_eigenvectors: 17.73s test_sq_rods ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00533390045166 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 46 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.561945, 0.780843, 0.780846, 0.924372, 1.00804, 1.00804, 1.09859 elapsed time for k point: 0.366296052933 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 134 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897998, 0.56021, 0.767785, 0.782438, 0.912603, 1.00889, 1.00949, 1.11586 elapsed time for k point: 1.34259295464 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178853, 0.553301, 0.732522, 0.786672, 0.890463, 1.01386, 1.02078, 1.11301 elapsed time for k point: 0.275792837143 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.266124, 0.534865, 0.689376, 0.79205, 0.872926, 1.0209, 1.04285, 1.10753 elapsed time for k point: 0.225009918213 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.349588, 0.49478, 0.658508, 0.796524, 0.862684, 1.02898, 1.07044, 1.10003 elapsed time for k point: 0.27438211441 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 48 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.413346, 0.444623, 0.648672, 0.798265, 0.859327, 1.03311, 1.0958, 1.09742 elapsed time for k point: 0.484246969223 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.424298, 0.448983, 0.644549, 0.802551, 0.854853, 0.98984, 1.05831, 1.11679 elapsed time for k point: 0.334935903549 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.455354, 0.461161, 0.63323, 0.814782, 0.834251, 0.934558, 1.01274, 1.12367 elapsed time for k point: 0.275401115417 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.478427, 0.501912, 0.61745, 0.784489, 0.83371, 0.906541, 0.967734, 1.12636 elapsed time for k point: 0.235586881638 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.495605, 0.556867, 0.601739, 0.720584, 0.858432, 0.897772, 0.926611, 1.12762 elapsed time for k point: 0.235298156738 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.503606, 0.594344, 0.594357, 0.679389, 0.883665, 0.895782, 0.895787, 1.12801 elapsed time for k point: 0.223999023438 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.474671, 0.549917, 0.608032, 0.745035, 0.848355, 0.895854, 0.945891, 1.12708 elapsed time for k point: 0.185694932938 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 20 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.373254, 0.543225, 0.646251, 0.817389, 0.830457, 0.896516, 1.0176, 1.12198 elapsed time for k point: 0.205070972443 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252369, 0.551073, 0.700804, 0.797552, 0.899586, 0.90339, 1.08791, 1.10099 elapsed time for k point: 0.264535903931 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 35 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.12694, 0.558854, 0.755651, 0.785047, 0.909884, 0.968813, 1.04814, 1.11332 elapsed time for k point: 0.355278015137 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 85 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.561945, 0.780843, 0.780846, 0.924372, 1.00804, 1.00804, 1.09859 elapsed time for k point: 0.670037984848 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.503605801522 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.444622913471 at Vector3<0.5, 0.0, 0.0> to 0.594344024552 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.594356639447 at Vector3<0.5, 0.5, 0.0> to 0.780842812191 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679388741308 at Vector3<0.5, 0.5, 0.0> to 0.817389371954 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.830457382234 at Vector3<0.3, 0.3, 0.0> to 0.924371683059 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.895781768412 at Vector3<0.5, 0.5, 0.0> to 1.03311041392 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.895786874533 at Vector3<0.5, 0.5, 0.0> to 1.09580214922 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.09741680959 at Vector3<0.5, 0.0, 0.0> to 1.12801276481 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.594344024552) to band 3 (0.594356639447), 0.00212246791043% Gap from band 4 (0.817389371954) to band 5 (0.830457382234), 1.58607106473% Gap from band 7 (1.09580214922) to band 8 (1.09741680959), 0.14724114588% total elapsed time for run: 5.96116185188 done Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00559782981873 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 35 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.550336, 0.561338, 0.56134, 0.822948, 0.868842, 0.965325, 1.08938 elapsed time for k point: 0.281166791916 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tmfreqs:, 2, 0.1, 0, 0, 0.1, 0.0651416, 0.525004, 0.561885, 0.586307, 0.823536, 0.867346, 0.954632, 1.05688 elapsed time for k point: 0.273324966431 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 3, 0.2, 0, 0, 0.2, 0.127665, 0.49365, 0.563323, 0.617312, 0.822737, 0.86353, 0.924306, 1.03882 elapsed time for k point: 0.135620117188 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 4, 0.3, 0, 0, 0.3, 0.184047, 0.461592, 0.565122, 0.651397, 0.810839, 0.858984, 0.892949, 1.03589 elapsed time for k point: 0.134732961655 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0.4, 0, 0, 0.4, 0.227778, 0.433361, 0.566596, 0.689045, 0.778792, 0.855425, 0.879398, 1.03874 elapsed time for k point: 0.134968996048 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 6, 0.5, 0, 0, 0.5, 0.245809, 0.420657, 0.567163, 0.720092, 0.747203, 0.85409, 0.877012, 1.0408 elapsed time for k point: 0.144855976105 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 11 iterations. tmfreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.249299, 0.427308, 0.560221, 0.718025, 0.756122, 0.855013, 0.877106, 1.02917 elapsed time for k point: 0.115330934525 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.258693, 0.445541, 0.543385, 0.711698, 0.77935, 0.858136, 0.877357, 1.00092 elapsed time for k point: 0.125992059708 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.270963, 0.470322, 0.524053, 0.701396, 0.810963, 0.864394, 0.877683, 0.965108 elapsed time for k point: 0.125080108643 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.281614, 0.493207, 0.508823, 0.689961, 0.846785, 0.874595, 0.878068, 0.926581 elapsed time for k point: 0.145081043243 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.285906, 0.502981, 0.502983, 0.684476, 0.874359, 0.883317, 0.883317, 0.892993 elapsed time for k point: 0.155006170273 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 17 iterations. tmfreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.276089, 0.491352, 0.508683, 0.69258, 0.839723, 0.856431, 0.907219, 0.907347 elapsed time for k point: 0.175240039825 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.240239, 0.47923, 0.523499, 0.685362, 0.829266, 0.840451, 0.910791, 0.941595 elapsed time for k point: 0.125077009201 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.17524, 0.488533, 0.541561, 0.64751, 0.83002, 0.850443, 0.922657, 0.983925 elapsed time for k point: 0.125105142593 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.0915259, 0.516393, 0.555924, 0.601211, 0.824561, 0.86529, 0.948412, 1.03526 elapsed time for k point: 0.135188102722 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 59 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.550336, 0.561338, 0.56134, 0.822948, 0.868842, 0.965325, 1.08938 .elapsed time for k point: 0.468983888626 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.28590577912 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.4206573384 at Vector3<0.5, 0.0, 0.0> to 0.550336075483 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.502983097837 at Vector3<0.5, 0.5, 0.0> to 0.567163287813 at Vector3<0.5, 0.0, 0.0> Band 4 range: 0.561339793989 at Vector3<0.0, 0.0, 0.0> to 0.720091820456 at Vector3<0.5, 0.0, 0.0> Band 5 range: 0.747202991048 at Vector3<0.5, 0.0, 0.0> to 0.874359380501 at Vector3<0.5, 0.5, 0.0> Band 6 range: 0.840450969753 at Vector3<0.3, 0.3, 0.0> to 0.883317372582 at Vector3<0.5, 0.5, 0.0> Band 7 range: 0.877011871833 at Vector3<0.5, 0.0, 0.0> to 0.965325380898 at Vector3<0.0, 0.0, 0.0> Band 8 range: 0.89299334956 at Vector3<0.5, 0.5, 0.0> to 1.08937768201 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.28590577912) to band 2 (0.4206573384), 38.1428228955% Gap from band 4 (0.720091820456) to band 5 (0.747202991048), 3.69539514201% total elapsed time for run: 2.80797886848 done test_sq_rods: 8.77s test_strip ======================== Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 11 k-points Vector3<0.1, 0.0, 0.0> Vector3<0.39, 0.0, 0.0> Vector3<0.68, 0.0, 0.0> Vector3<0.97, 0.0, 0.0> Vector3<1.26, 0.0, 0.0> Vector3<1.55, 0.0, 0.0> Vector3<1.84, 0.0, 0.0> Vector3<2.13, 0.0, 0.0> Vector3<2.42, 0.0, 0.0> Vector3<2.71, 0.0, 0.0> Vector3<3.0, 0.0, 0.0> elapsed time for initialization: 0.0161521434784 solve_kpoint (0.1,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 41 iterations. freqs:, 1, 0.1, 0, 0, 0.1, 0.0807582, 0.0855765, 0.3147, 0.394675 elapsed time for k point: 0.85067987442 zparity:, 1, 0.991845764323, -0.999316577892, 0.926395271398, 0.734287985459 yparity:, 1, -0.999999994167, 0.999999994877, 0.999999317134, -0.999990343255 solve_kpoint (0.39,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 30 iterations. freqs:, 2, 0.39, 0, 0, 0.39, 0.305867, 0.318873, 0.435494, 0.471163 elapsed time for k point: 0.624843835831 zparity:, 2, 0.849797629053, -0.856208311583, 0.613504714457, 0.704049364345 yparity:, 2, -0.999999978241, 0.999999790163, 1.00000586834, -0.999935345259 solve_kpoint (0.68,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 33 iterations. freqs:, 3, 0.68, 0, 0, 0.68, 0.506676, 0.511416, 0.580115, 0.594058 elapsed time for k point: 0.685779809952 zparity:, 3, 0.643047109776, -0.513297056488, 0.749333227898, -0.517458139401 yparity:, 3, -1.00000924371, 0.999986730786, -0.999977348488, 0.999973952734 solve_kpoint (0.97,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 28 iterations. freqs:, 4, 0.97, 0, 0, 0.97, 0.629793, 0.64279, 0.724022, 0.741057 elapsed time for k point: 0.584275007248 zparity:, 4, 0.950559945676, -0.795378249422, 0.290959329597, -0.25994001915 yparity:, 4, -0.999975648561, 0.99997341981, -0.999995157307, 1.00000240214 solve_kpoint (1.26,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 53 iterations. freqs:, 5, 1.26, 0, 0, 1.26, 0.691833, 0.716391, 0.880207, 0.915146 elapsed time for k point: 1.09303998947 zparity:, 5, 0.989433203648, -0.941034559795, -0.905709752059, 0.125905116405 yparity:, 5, -0.999934195805, 0.999992049633, -0.999995714577, 1.00002144472 solve_kpoint (1.55,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 29 iterations. freqs:, 6, 1.55, 0, 0, 1.55, 0.750543, 0.778256, 0.948183, 1.0502 elapsed time for k point: 0.60437297821 zparity:, 6, 0.995326739506, -0.973076667004, -0.986247911215, 0.787849662325 yparity:, 6, -0.999907911974, 0.999996472511, -1.00000037749, 1.00017628212 solve_kpoint (1.84,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 32 iterations. freqs:, 7, 1.84, 0, 0, 1.84, 0.811564, 0.839559, 1.01283, 1.12995 elapsed time for k point: 0.666613101959 zparity:, 7, 0.99732410812, -0.984353627052, -0.992065694749, 0.943289222913 yparity:, 7, -0.999884349307, 0.999998717603, -1.00000422895, 1.00025129511 solve_kpoint (2.13,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 111 iterations. freqs:, 8, 2.13, 0, 0, 2.13, 0.875475, 0.902606, 1.07764, 1.18313 elapsed time for k point: 2.3049120903 zparity:, 8, 0.99824862905, -0.989579122305, -0.994248025411, -0.985837439536 yparity:, 8, -0.999863363609, 1.00000027727, -1.00000949462, -0.999844607751 solve_kpoint (2.42,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 22 iterations. freqs:, 9, 2.42, 0, 0, 2.42, 0.942027, 0.967822, 1.14317, 1.23602 elapsed time for k point: 0.466953992844 zparity:, 9, 0.998753086191, -0.992422557413, -0.995415920791, -0.990851025724 yparity:, 9, -0.999845914689, 1.00000151004, -1.00001600828, -0.999840967114 solve_kpoint (2.71,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 16 iterations. freqs:, 10, 2.71, 0, 0, 2.71, 1.01083, 1.03512, 1.20959, 1.29208 elapsed time for k point: 0.342739105225 zparity:, 10, 0.999058451884, -0.99413850546, -0.996144476211, -0.993490974655 yparity:, 10, -0.999833271898, 1.00000252462, -1.00002309233, -0.999834812139 solve_kpoint (3,0,0): Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 16 iterations. freqs:, 11, 3, 0, 0, 3, 1.0815, 1.10429, 1.27693, 1.35105 elapsed time for k point: 0.343632936478 zparity:, 11, 0.999257350936, -0.995250798058, -0.996639608967, -0.995090516581 yparity:, 11, -0.999826481415, 1.0000033584, -1.00003015737, -0.999833155067 Band 1 range: 0.0807582053405 at Vector3<0.1, 0.0, 0.0> to 1.08149969321 at Vector3<3.0, 0.0, 0.0> Band 2 range: 0.0855765355013 at Vector3<0.1, 0.0, 0.0> to 1.10428530979 at Vector3<3.0, 0.0, 0.0> Band 3 range: 0.314699680033 at Vector3<0.1, 0.0, 0.0> to 1.27692880877 at Vector3<3.0, 0.0, 0.0> Band 4 range: 0.394674794346 at Vector3<0.1, 0.0, 0.0> to 1.35104977582 at Vector3<3.0, 0.0, 0.0> total elapsed time for run: 8.58966898918 done Initializing fields to random numbers... Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<2.22580645161, 0.0, 0.0> elapsed time for initialization: 0.0165960788727 solve_kpoint (2.22581,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 53 iterations. freqs:, 1, 2.22581, 0, 0, 2.22581, 0.897189, 0.92391, 1.0992, 1.20025 elapsed time for k point: 1.10221409798 total elapsed time for run: 1.11901903152 done find-k 4 at 2.22580645161: 0.555084522615 Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.0645161290323, 0.0, 0.0> elapsed time for initialization: 0.0162889957428 solve_kpoint (0.0645161,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 42 iterations. freqs:, 1, 0.0645161, 0, 0, 0.0645161, 0.05217, 0.055309, 0.308728, 0.391146 elapsed time for k point: 0.869985818863 total elapsed time for run: 0.886433839798 done find-k 4 at 0.0645161290323: -0.2540155697 Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<2.58064516129, 0.0, 0.0> elapsed time for initialization: 0.0160129070282 solve_kpoint (2.58065,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 46 iterations. freqs:, 1, 2.58065, 0, 0, 2.58065, 0.979885, 1.00486, 1.17985, 1.26669 elapsed time for k point: 0.954475164413 total elapsed time for run: 0.970633983612 done find-k 4 at 2.58064516129: 0.621532505066 Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<1.32258064516, 0.0, 0.0> elapsed time for initialization: 0.0158848762512 solve_kpoint (1.32258,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 67 iterations. freqs:, 1, 1.32258, 0, 0, 1.32258, 0.70442, 0.730073, 0.895938, 0.950718 elapsed time for k point: 1.37700009346 total elapsed time for run: 1.39302396774 done find-k 4 at 1.32258064516: 0.305556312378 Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.764214546918, 0.0, 0.0> elapsed time for initialization: 0.0158879756927 solve_kpoint (0.764215,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 41 iterations. freqs:, 1, 0.764215, 0, 0, 0.764215, 0.556038, 0.558219, 0.612015, 0.633507 elapsed time for k point: 0.852993011475 total elapsed time for run: 0.86901307106 done find-k 4 at 0.764214546918: -0.011654653788 Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.789000236674, 0.0, 0.0> elapsed time for initialization: 0.0157299041748 solve_kpoint (0.789,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 41 iterations. freqs:, 1, 0.789, 0, 0, 0.789, 0.56861, 0.570789, 0.622618, 0.645257 elapsed time for k point: 0.84842300415 total elapsed time for run: 0.864284038544 done find-k 4 at 0.789000236674: 9.52760944106e-05 find-k 3 at 0.789000236674: -0.0225429396421 (cached) find-k 3 at 0.0645161290323: -0.336433648931 (cached) find-k 3 at 2.58064516129: 0.534691335144 (cached) Initializing eigensolver data Computing 3 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 3 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.839636493413, 0.0, 0.0> elapsed time for initialization: 0.0144438743591 solve_kpoint (0.839636,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3 Solving for bands 1 to 3... Finished solving for bands 1 to 3 after 39 iterations. freqs:, 1, 0.839636, 0, 0, 0.839636, 0.590583, 0.594418, 0.647157 elapsed time for k point: 0.542623996735 total elapsed time for run: 0.557201147079 done find-k 3 at 0.839636493413: 0.00199552624961 Initializing eigensolver data Computing 3 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 3 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.835826416059, 0.0, 0.0> elapsed time for initialization: 0.0143208503723 solve_kpoint (0.835826,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3 Solving for bands 1 to 3... Finished solving for bands 1 to 3 after 39 iterations. freqs:, 1, 0.835826, 0, 0, 0.835826, 0.589103, 0.59274, 0.645172 elapsed time for k point: 0.54151391983 total elapsed time for run: 0.55594587326 done find-k 3 at 0.835826416059: 1.06975429137e-05 find-k 2 at 0.835826416059: -0.0524213315718 (cached) find-k 2 at 0.0645161290323: -0.589852340034 (cached) find-k 2 at 2.58064516129: 0.359697149718 (cached) Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.954259874649, 0.0, 0.0> elapsed time for initialization: 0.0129840373993 solve_kpoint (0.95426,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2 Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 30 iterations. freqs:, 1, 0.95426, 0, 0, 0.95426, 0.62585, 0.637763 elapsed time for k point: 0.312534093857 total elapsed time for run: 0.325622081757 done find-k 2 at 0.954259874649: -0.00739874518847 Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.977006296664, 0.0, 0.0> elapsed time for initialization: 0.0130290985107 solve_kpoint (0.977006,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2 Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 29 iterations. freqs:, 1, 0.977006, 0, 0, 0.977006, 0.631507, 0.644971 elapsed time for k point: 0.301630973816 total elapsed time for run: 0.314761161804 done find-k 2 at 0.977006296664: -0.000190225578047 find-k 1 at 2.22580645161: 0.252027371793 (cached) find-k 1 at 0.0645161290323: -0.592991247363 (cached) find-k 1 at 2.58064516129: 0.334723526239 (cached) Initializing eigensolver data Computing 1 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<1.1208817714, 0.0, 0.0> elapsed time for initialization: 0.0117409229279 solve_kpoint (1.12088,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 31 iterations. freqs:, 1, 1.12088, 0, 0, 1.12088, 0.663439 elapsed time for k point: 0.157332897186 total elapsed time for run: 0.169164896011 done find-k 1 at 1.1208817714: 0.0182778920892 Initializing eigensolver data Computing 1 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<1.03334852826, 0.0, 0.0> elapsed time for initialization: 0.0117659568787 solve_kpoint (1.03335,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 33 iterations. freqs:, 1, 1.03335, 0, 0, 1.03335, 0.644604 elapsed time for k point: 0.16740489006 total elapsed time for run: 0.179258108139 done find-k 1 at 1.03334852826: -0.000557634136478 Initializing eigensolver data Computing 1 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<1.03584152004, 0.0, 0.0> elapsed time for initialization: 0.0116248130798 solve_kpoint (1.03584,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 33 iterations. freqs:, 1, 1.03584, 0, 0, 1.03584, 0.645161 elapsed time for k point: 0.16819190979 total elapsed time for run: 0.179919958115 done find-k 1 at 1.03584152004: -7.84240499208e-07 Initializing eigensolver data Computing 4 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 4 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<1.03584503596, 0.0, 0.0> elapsed time for initialization: 0.0156500339508 solve_kpoint (1.03585,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3, band 4 Solving for bands 1 to 4... Finished solving for bands 1 to 4 after 42 iterations. freqs:, 1, 1.03585, 0, 0, 1.03585, 0.645161, 0.662112, 0.765915, 0.77985 elapsed time for k point: 0.873172998428 Outputting fields to test_strip-flux.v.k01.b04.x.h5... yparity:, 1, -0.999961745053, 0.999981352697, -0.999996484397, 1.00000240523 velocity:, 1, Vector3<0.223053364007, -1.65971418147e-05, -4.43949571853e-07>, Vector3<0.275781519108, -2.29679616212e-08, 2.48574079429e-06>, Vector3<0.640344418656, -8.89447691177e-07, 2.70293814606e-08>, Vector3<0.598378122761, 6.79883230286e-07, 7.0049006738e-07> total elapsed time for run: 1.13003587723 done Initializing eigensolver data Computing 3 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 3 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.977622101449, 0.0, 0.0> elapsed time for initialization: 0.0145308971405 solve_kpoint (0.977622,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2, band 3 Solving for bands 1 to 3... Finished solving for bands 1 to 3 after 42 iterations. freqs:, 1, 0.977622, 0, 0, 0.977622, 0.631657, 0.645161, 0.728827 elapsed time for k point: 0.583023071289 Outputting fields to test_strip-flux.v.k01.b03.x.h5... yparity:, 1, -0.999973901721, 0.99997467296, -0.999995585369 velocity:, 1, Vector3<0.242791049683, -1.510429774e-05, -4.45845754544e-07>, Vector3<0.308492291467, -2.80824727514e-07, 2.21219664407e-06>, Vector3<0.631455897551, -1.15170017682e-06, -2.4920645551e-08> total elapsed time for run: 0.834273815155 done Initializing eigensolver data Computing 2 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 2 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.835805768998, 0.0, 0.0> elapsed time for initialization: 0.0131988525391 solve_kpoint (0.835806,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1, band 2 Solving for bands 1 to 2... Finished solving for bands 1 to 2 after 32 iterations. freqs:, 1, 0.835806, 0, 0, 0.835806, 0.589095, 0.592731 elapsed time for k point: 0.33099603653 Outputting fields to test_strip-flux.v.k01.b02.x.h5... yparity:, 1, -1.00004875683, 0.999921187918 velocity:, 1, Vector3<0.392057598298, -1.00894907182e-05, -2.19751683028e-07>, Vector3<0.442646171767, 3.82713625908e-07, 1.06153350775e-06> total elapsed time for run: 0.577703952789 done Initializing eigensolver data Computing 1 bands with 1e-12 tolerance Working in 3 dimensions. Grid size is 1 x 64 x 64. Solving for 1 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 2, 0) (0, 0, 2) Cell volume = 4 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 0.5, -0) (0, -0, 0.5) Geometric objects: block, center = (0,0,0.5625) size (1e+20,1e+20,0.875) axes (1,0,0), (0,1,0), (0,0,1) block, center = (0,0,0) size (1e+20,0.3,0.25) axes (1,0,0), (0,1,0), (0,0,1) Geometric object tree has depth 2 and 24 object nodes (vs. 2 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: . Initializing fields to random numbers... 1 k-points Vector3<0.788801145908, 0.0, 0.0> elapsed time for initialization: 0.0121219158173 solve_kpoint (0.788801,0,0): freqs:, k index, k1, k2, k3, kmag/2pi, band 1 Solving for bands 1 to 1... Finished solving for bands 1 to 1 after 56 iterations. freqs:, 1, 0.788801, 0, 0, 0.788801, 0.568514 .elapsed time for k point: 0.281500816345 Outputting fields to test_strip-flux.v.k01.b01.x.h5... yparity:, 1, -1.00007453249 velocity:, 1, Vector3<0.484362020207, -1.008407132e-05, -1.43904079203e-07> total elapsed time for run: 0.523859977722 done kvals:, 0.645161290323, 1, 4, 0.0, 0.0, 0.0, 1.0, 0.0, 0.0, 1.03584503596, 0.977622101449, 0.835805768998, 0.788801145908 test_strip: 20.09s test_subpixel_averaging ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (1, 0, 0) (0, 1, 0) (0, 0, 1) Cell volume = 1 Reciprocal lattice vectors (/ 2 pi): (1, -0, 0) (-0, 1, -0) (0, -0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.1, 0.0, 0.0> Vector3<0.2, 0.0, 0.0> Vector3<0.3, 0.0, 0.0> Vector3<0.4, 0.0, 0.0> Vector3<0.5, 0.0, 0.0> Vector3<0.5, 0.1, 0.0> Vector3<0.5, 0.2, 0.0> Vector3<0.5, 0.3, 0.0> Vector3<0.5, 0.4, 0.0> Vector3<0.5, 0.5, 0.0> Vector3<0.4, 0.4, 0.0> Vector3<0.3, 0.3, 0.0> Vector3<0.2, 0.2, 0.0> Vector3<0.1, 0.1, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00544619560242 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 52 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.416846036911 solve_kpoint (0.1,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 120 iterations. tefreqs:, 2, 0.1, 0, 0, 0.1, 0.0897332, 0.551138, 0.7616, 0.774682, 0.907199, 1.00188, 1.00357, 1.10209 elapsed time for k point: 1.20806407928 solve_kpoint (0.2,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 3, 0.2, 0, 0, 0.2, 0.178692, 0.544896, 0.728534, 0.778528, 0.880244, 1.00699, 1.01696, 1.10027 elapsed time for k point: 0.267216920853 solve_kpoint (0.3,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 4, 0.3, 0, 0, 0.3, 0.265798, 0.528176, 0.685449, 0.783377, 0.860714, 1.01515, 1.03843, 1.09664 elapsed time for k point: 0.246293067932 solve_kpoint (0.4,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 5, 0.4, 0, 0, 0.4, 0.348956, 0.490738, 0.652797, 0.787382, 0.849999, 1.02443, 1.06441, 1.09121 elapsed time for k point: 0.286065816879 solve_kpoint (0.5,0,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 40 iterations. tefreqs:, 6, 0.5, 0, 0, 0.5, 0.412791, 0.441588, 0.641998, 0.788933, 0.846588, 1.02916, 1.08607, 1.08787 elapsed time for k point: 0.405206918716 solve_kpoint (0.5,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 7, 0.5, 0.1, 0, 0.509902, 0.423741, 0.445781, 0.63823, 0.793147, 0.842943, 0.986523, 1.05018, 1.10383 elapsed time for k point: 0.335530996323 solve_kpoint (0.5,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 8, 0.5, 0.2, 0, 0.538516, 0.454781, 0.457434, 0.627898, 0.805254, 0.826101, 0.927945, 1.00456, 1.10879 elapsed time for k point: 0.287341833115 solve_kpoint (0.5,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 9, 0.5, 0.3, 0, 0.583095, 0.473767, 0.501279, 0.61358, 0.781467, 0.824181, 0.894949, 0.959051, 1.1107 elapsed time for k point: 0.24631690979 solve_kpoint (0.5,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 10, 0.5, 0.4, 0, 0.640312, 0.489649, 0.556045, 0.59957, 0.719611, 0.849247, 0.884337, 0.917168, 1.11162 elapsed time for k point: 0.236833095551 solve_kpoint (0.5,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 11, 0.5, 0.5, 0, 0.707107, 0.496836, 0.593141, 0.593154, 0.679169, 0.878684, 0.881977, 0.881982, 1.11192 elapsed time for k point: 0.234611988068 solve_kpoint (0.4,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tefreqs:, 12, 0.4, 0.4, 0, 0.565685, 0.470987, 0.546003, 0.606732, 0.743602, 0.839223, 0.882254, 0.93697, 1.11121 elapsed time for k point: 0.186392068863 solve_kpoint (0.3,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 13, 0.3, 0.3, 0, 0.424264, 0.372435, 0.536186, 0.644572, 0.809689, 0.825804, 0.883642, 1.0102, 1.10725 elapsed time for k point: 0.216104030609 solve_kpoint (0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 14, 0.2, 0.2, 0, 0.282843, 0.252088, 0.542887, 0.698081, 0.789371, 0.888483, 0.897858, 1.07884, 1.09039 elapsed time for k point: 0.295893192291 solve_kpoint (0.1,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 34 iterations. tefreqs:, 15, 0.1, 0.1, 0, 0.141421, 0.126841, 0.549908, 0.750378, 0.777261, 0.903059, 0.961984, 1.04191, 1.10004 elapsed time for k point: 0.346840143204 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 93 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.552709, 0.773227, 0.77323, 0.922997, 1.00017, 1.00017, 1.09282 elapsed time for k point: 0.737483978271 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.496835864745 at Vector3<0.5, 0.5, 0.0> Band 2 range: 0.441588449723 at Vector3<0.5, 0.0, 0.0> to 0.593140514116 at Vector3<0.5, 0.5, 0.0> Band 3 range: 0.593153586312 at Vector3<0.5, 0.5, 0.0> to 0.773226559307 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.679169013076 at Vector3<0.5, 0.5, 0.0> to 0.809689155168 at Vector3<0.3, 0.3, 0.0> Band 5 range: 0.82418144435 at Vector3<0.5, 0.3, 0.0> to 0.922996519586 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.881977091666 at Vector3<0.5, 0.5, 0.0> to 1.02915970506 at Vector3<0.5, 0.0, 0.0> Band 7 range: 0.881981813442 at Vector3<0.5, 0.5, 0.0> to 1.08607293237 at Vector3<0.5, 0.0, 0.0> Band 8 range: 1.08786896351 at Vector3<0.5, 0.0, 0.0> to 1.11191737076 at Vector3<0.5, 0.5, 0.0> Gap from band 2 (0.593140514116) to band 3 (0.593153586312), 0.00220387097771% Gap from band 4 (0.809689155168) to band 5 (0.82418144435), 1.77398249124% Gap from band 7 (1.08607293237) to band 8 (1.08786896351), 0.165232671622% total elapsed time for run: 5.96012806892 done epsilon: 1-12, mean 2.38229, harm. mean 1.1448, 14.5508% > 1, 12.5663% "fill" .Outputting test_subpixel_averaging-epsilon.h5... test_subpixel_averaging: 6.00s test_tri_holes ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.45, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 3 and 16 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00779581069946 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 56 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.656836, 0.715623, 0.716068, 0.738377, 0.825979, 0.827163, 1.04116 elapsed time for k point: 0.448586940765 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 51 iterations. tefreqs:, 2, 0, 0.1, 0, 0.11547, 0.0694821, 0.652351, 0.679959, 0.706966, 0.760813, 0.839484, 0.84298, 1.03546 elapsed time for k point: 0.515650987625 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 3, 0, 0.2, 0, 0.23094, 0.137272, 0.615214, 0.658316, 0.688898, 0.777327, 0.869983, 0.879951, 1.02022 elapsed time for k point: 0.287410974503 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tefreqs:, 4, 0, 0.3, 0, 0.34641, 0.200458, 0.560713, 0.652934, 0.672026, 0.788475, 0.905474, 0.920288, 1.00658 elapsed time for k point: 0.277954816818 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 30 iterations. tefreqs:, 5, 0, 0.4, 0, 0.46188, 0.251902, 0.513413, 0.649737, 0.660743, 0.79604, 0.93646, 0.952374, 1.00191 elapsed time for k point: 0.304865121841 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 35 iterations. tefreqs:, 6, 0, 0.5, 0, 0.57735, 0.274155, 0.492434, 0.648615, 0.656803, 0.798817, 0.949956, 0.963485, 1.00797 elapsed time for k point: 0.355842113495 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 28 iterations. tefreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.276103, 0.493884, 0.623964, 0.680084, 0.79654, 0.952442, 0.963435, 1.00796 elapsed time for k point: 0.285908937454 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 31 iterations. tefreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.281494, 0.498189, 0.595471, 0.70467, 0.790197, 0.959226, 0.963379, 1.00792 elapsed time for k point: 0.316251993179 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 31 iterations. tefreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.288945, 0.505245, 0.568143, 0.726282, 0.780907, 0.962873, 0.969263, 1.00805 elapsed time for k point: 0.315142869949 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 32 iterations. tefreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.29604, 0.514888, 0.544209, 0.744263, 0.76985, 0.962861, 0.978949, 1.00946 elapsed time for k point: 0.325495004654 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 54 iterations. tefreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.299305, 0.526635, 0.526971, 0.757838, 0.758439, 0.962922, 0.983456, 1.01518 elapsed time for k point: 0.547027111053 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.280656, 0.522942, 0.556626, 0.735071, 0.77423, 0.95812, 0.968138, 0.99842 elapsed time for k point: 0.295851945877 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 26 iterations. tefreqs:, 13, -0.2, 0.2, 0, 0.4, 0.227959, 0.557659, 0.592002, 0.715363, 0.778635, 0.930406, 0.931674, 1.00032 elapsed time for k point: 0.2676820755 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 25 iterations. tefreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.157628, 0.611565, 0.627491, 0.703542, 0.775273, 0.887377, 0.887503, 1.01567 elapsed time for k point: 0.257158041 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 31 iterations. tefreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.0801245, 0.65125, 0.670687, 0.706804, 0.763085, 0.844811, 0.846761, 1.03423 elapsed time for k point: 0.316832065582 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 109 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.656836, 0.715623, 0.716068, 0.738377, 0.825979, 0.827163, 1.04116 elapsed time for k point: 0.868767976761 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.299304947312 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.492434282362 at Vector3<0.0, 0.5, 0.0> to 0.65683626835 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.526971050645 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.715623220021 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.656803142745 at Vector3<0.0, 0.5, 0.0> to 0.75783822175 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.738377430375 at Vector3<0.0, 0.0, 0.0> to 0.79881687928 at Vector3<0.0, 0.5, 0.0> Band 6 range: 0.82597871647 at Vector3<0.0, 0.0, 0.0> to 0.962921544101 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 7 range: 0.827163453884 at Vector3<0.0, 0.0, 0.0> to 0.983456330353 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 8 range: 0.998420061184 at Vector3<-0.266666666667, 0.266666666667, 0.0> to 1.04115512521 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.299304947312) to band 2 (0.492434282362), 48.7860971926% Gap from band 5 (0.79881687928) to band 6 (0.82597871647), 3.34341590548% Gap from band 7 (0.983456330353) to band 8 (0.998420061184), 1.51005692332% total elapsed time for run: 5.99601984024 done Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.45, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 3 and 16 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00806188583374 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 31 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.398513, 0.492888, 0.493368, 0.682486, 0.682532, 0.692015, 0.898224 elapsed time for k point: 0.249665021896 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 20 iterations. tmfreqs:, 2, 0, 0.1, 0, 0.11547, 0.0581198, 0.391139, 0.491701, 0.498714, 0.658377, 0.683973, 0.717136, 0.879138 elapsed time for k point: 0.20615196228 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 3, 0, 0.2, 0, 0.23094, 0.114967, 0.372435, 0.488376, 0.510297, 0.634188, 0.687769, 0.745313, 0.845031 elapsed time for k point: 0.165028095245 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 4, 0, 0.3, 0, 0.34641, 0.169005, 0.346637, 0.484408, 0.520098, 0.618254, 0.692346, 0.770438, 0.813964 elapsed time for k point: 0.145728111267 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0, 0.4, 0, 0.46188, 0.217539, 0.316063, 0.481302, 0.523954, 0.612544, 0.695969, 0.784104, 0.798008 elapsed time for k point: 0.135746955872 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 6, 0, 0.5, 0, 0.57735, 0.246221, 0.2936, 0.480139, 0.524322, 0.612077, 0.697337, 0.77948, 0.802954 elapsed time for k point: 0.155822038651 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.247714, 0.293902, 0.474174, 0.530395, 0.610517, 0.697722, 0.778384, 0.803945 elapsed time for k point: 0.145487070084 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.252117, 0.294341, 0.462144, 0.543033, 0.606057, 0.698701, 0.775411, 0.806864 elapsed time for k point: 0.156052827835 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.259212, 0.293544, 0.450321, 0.556823, 0.599242, 0.699858, 0.771489, 0.811554 elapsed time for k point: 0.155902147293 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 16 iterations. tmfreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.268674, 0.289451, 0.441996, 0.569747, 0.590701, 0.700763, 0.768006, 0.817777 elapsed time for k point: 0.16600894928 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tmfreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.280092, 0.280155, 0.439082, 0.58087, 0.581035, 0.701106, 0.766461, 0.825015 elapsed time for k point: 0.276740074158 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.244445, 0.307226, 0.448708, 0.559739, 0.597235, 0.699583, 0.773933, 0.80772 elapsed time for k point: 0.156178951263 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 13, -0.2, 0.2, 0, 0.4, 0.192601, 0.336978, 0.467722, 0.538055, 0.609757, 0.695231, 0.77985, 0.802206 elapsed time for k point: 0.136221885681 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.132075, 0.365778, 0.483253, 0.517524, 0.627555, 0.689432, 0.753492, 0.835064 elapsed time for k point: 0.135972976685 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tmfreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.0670312, 0.388874, 0.490908, 0.500671, 0.654295, 0.684452, 0.721561, 0.874451 elapsed time for k point: 0.185553789139 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 31 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.398513, 0.492888, 0.493368, 0.682486, 0.682532, 0.692015, 0.898224 .elapsed time for k point: 0.250520944595 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.280091568174 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.280155239138 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.398512608105 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.439081722845 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.4928881019 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.493368477883 at Vector3<0.0, 0.0, 0.0> to 0.580870136527 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.581035246804 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.682486080137 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.682531744671 at Vector3<0.0, 0.0, 0.0> to 0.701106159321 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 7 range: 0.692014574213 at Vector3<0.0, 0.0, 0.0> to 0.784104262239 at Vector3<0.0, 0.4, 0.0> Band 8 range: 0.798007787259 at Vector3<0.0, 0.4, 0.0> to 0.898223942482 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.280091568174) to band 2 (0.280155239138), 0.0227296123829% Gap from band 2 (0.398512608105) to band 3 (0.439081722845), 9.68705571209% Gap from band 3 (0.4928881019) to band 4 (0.493368477883), 0.0974139980871% Gap from band 4 (0.580870136527) to band 5 (0.581035246804), 0.0284206063456% Gap from band 5 (0.682486080137) to band 6 (0.682531744671), 0.00669068687167% Gap from band 7 (0.784104262239) to band 8 (0.798007787259), 1.75759043419% total elapsed time for run: 2.8325278759 done test_tri_holes: 8.83s test_tri_rods ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00581312179565 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 24 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.560518, 0.560561, 0.593296, 0.837451, 0.837595, 0.994129, 1.09832 elapsed time for k point: 0.195911169052 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tmfreqs:, 2, 0, 0.1, 0, 0.11547, 0.0711319, 0.538981, 0.559429, 0.617095, 0.834123, 0.839462, 0.988272, 1.08637 elapsed time for k point: 0.186550855637 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 3, 0, 0.2, 0, 0.23094, 0.138898, 0.508574, 0.556587, 0.65398, 0.825087, 0.84452, 0.968999, 1.05281 elapsed time for k point: 0.156832933426 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 4, 0, 0.3, 0, 0.34641, 0.198939, 0.479631, 0.553145, 0.693119, 0.813353, 0.850964, 0.932869, 1.02598 elapsed time for k point: 0.146379232407 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0, 0.4, 0, 0.46188, 0.244064, 0.4557, 0.550414, 0.730028, 0.80289, 0.856372, 0.891379, 1.01409 elapsed time for k point: 0.136654138565 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 6, 0, 0.5, 0, 0.57735, 0.262015, 0.445331, 0.549383, 0.749186, 0.797864, 0.85849, 0.870609, 1.01087 elapsed time for k point: 0.136337995529 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.262984, 0.4475, 0.545804, 0.752448, 0.797093, 0.860461, 0.870245, 0.99895 elapsed time for k point: 0.126261234283 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.265671, 0.453801, 0.535912, 0.761319, 0.795166, 0.866056, 0.869135, 0.973413 elapsed time for k point: 0.126327037811 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.269404, 0.463648, 0.52172, 0.773443, 0.792931, 0.867201, 0.874681, 0.94487 elapsed time for k point: 0.106531858444 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.273, 0.476141, 0.505606, 0.78524, 0.791235, 0.864672, 0.885801, 0.918597 elapsed time for k point: 0.106549978256 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.27469, 0.489984, 0.490239, 0.79072, 0.790832, 0.863041, 0.899109, 0.89925 elapsed time for k point: 0.0964500904083 Fixing e-field (band 1) phase by -1 + 4.11936e-08i; max ampl. = 0.93911 Outputting fields to test_tri_rods-e.k11.b01.z.tm.h5... Fixing e-field (band 2) phase by 4.11936e-08 + 1i; max ampl. = 1.08316 Outputting fields to test_tri_rods-e.k11.b02.z.tm.h5... Fixing e-field (band 3) phase by 1 + -4.11936e-08i; max ampl. = 0.877953 Outputting fields to test_tri_rods-e.k11.b03.z.tm.h5... Fixing e-field (band 4) phase by 1 + -4.11936e-08i; max ampl. = 1.24657 Outputting fields to test_tri_rods-e.k11.b04.z.tm.h5... Fixing e-field (band 5) phase by 4.11936e-08 + 1i; max ampl. = 1.10168 Outputting fields to test_tri_rods-e.k11.b05.z.tm.h5... Fixing e-field (band 6) phase by 1 + -4.11936e-08i; max ampl. = 1.76186 Outputting fields to test_tri_rods-e.k11.b06.z.tm.h5... Fixing e-field (band 7) phase by -1 + 4.11936e-08i; max ampl. = 1.0881 Outputting fields to test_tri_rods-e.k11.b07.z.tm.h5... Fixing e-field (band 8) phase by -1 + 4.11937e-08i; max ampl. = 1.08096 Outputting fields to test_tri_rods-e.k11.b08.z.tm.h5... solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 11 iterations. tmfreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.2632, 0.47091, 0.51804, 0.764413, 0.795091, 0.864427, 0.896871, 0.932925 elapsed time for k point: 0.116450071335 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 13, -0.2, 0.2, 0, 0.4, 0.222593, 0.476537, 0.539917, 0.715636, 0.806516, 0.856013, 0.929969, 0.977199 elapsed time for k point: 0.126268148422 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.15856, 0.501245, 0.552927, 0.666818, 0.82116, 0.846938, 0.963589, 1.03113 elapsed time for k point: 0.136105060577 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 17 iterations. tmfreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.0819275, 0.534465, 0.558896, 0.622523, 0.832982, 0.840137, 0.98638, 1.08149 elapsed time for k point: 0.177077054977 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 16 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.560518, 0.560561, 0.593296, 0.837451, 0.837595, 0.994129, 1.09832 elapsed time for k point: 0.132224082947 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.274690225862 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.445331080847 at Vector3<0.0, 0.5, 0.0> to 0.560518142316 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.490238914903 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.56056079478 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.593296087359 at Vector3<0.0, 0.0, 0.0> to 0.790719597444 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.790832076333 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.837451116754 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.837594852844 at Vector3<0.0, 0.0, 0.0> to 0.86720092649 at Vector3<-0.2, 0.4, 0.0> Band 7 range: 0.869134995574 at Vector3<-0.133333333333, 0.433333333333, 0.0> to 0.994129102266 at Vector3<0.0, 0.0, 0.0> Band 8 range: 0.899249909555 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 1.09831835292 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.274690225862) to band 2 (0.445331080847), 47.3988348385% Gap from band 3 (0.56056079478) to band 4 (0.593296087359), 5.6740646237% Gap from band 4 (0.790719597444) to band 5 (0.790832076333), 0.0142238651132% Gap from band 5 (0.837451116754) to band 6 (0.837594852844), 0.0171620472726% Gap from band 6 (0.86720092649) to band 7 (0.869134995574), 0.222775910928% total elapsed time for run: 2.25689506531 done Read lattice vectors Read Bloch wavevector (-0.333333, 0.333333, 0) Input lattice = (0.866025, 0.5, 0), (0.866025, -0.5, 0), (0, 0, 1) Output lattice = (2.59808, 1.5, 0), (1.29904, -2.25, 0), (0, 0, 3) Input data is rank 2, size 32x32x1. Output data 96x83x1 real part range: -1.03932 .. 1.03493 imag part range: -1.08496 .. 1.08496 Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: te. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00584101676941 solve_kpoint (0,0,0): tefreqs:, k index, k1, k2, k3, kmag/2pi, te band 1, te band 2, te band 3, te band 4, te band 5, te band 6, te band 7, te band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 56 iterations. tefreqs:, 1, 0, 0, 0, 0, 0, 0.561229, 0.793929, 0.794659, 1.03341, 1.03342, 1.11597, 1.11681 elapsed time for k point: 0.444468021393 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 31 iterations. tefreqs:, 2, 0, 0.1, 0, 0.11547, 0.101865, 0.559805, 0.79146, 0.793258, 0.992126, 1.02845, 1.09799, 1.1151 elapsed time for k point: 0.315666913986 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 29 iterations. tefreqs:, 3, 0, 0.2, 0, 0.23094, 0.202662, 0.555133, 0.784265, 0.784932, 0.925328, 1.01804, 1.06979, 1.11298 elapsed time for k point: 0.294708013535 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 25 iterations. tefreqs:, 4, 0, 0.3, 0, 0.34641, 0.300756, 0.545003, 0.752836, 0.776604, 0.881527, 1.00851, 1.04494, 1.1117 elapsed time for k point: 0.254926919937 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 5, 0, 0.4, 0, 0.46188, 0.392756, 0.521577, 0.705571, 0.77011, 0.86865, 1.00251, 1.02766, 1.11107 elapsed time for k point: 0.235076189041 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 6, 0, 0.5, 0, 0.57735, 0.468428, 0.473072, 0.683225, 0.767661, 0.866987, 1.00052, 1.02137, 1.11088 elapsed time for k point: 0.226624965668 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.472654, 0.474197, 0.67604, 0.772695, 0.866879, 0.969813, 1.05066, 1.11081 elapsed time for k point: 0.244113922119 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 24 iterations. tefreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.477432, 0.485081, 0.657266, 0.784802, 0.866577, 0.932933, 1.08112, 1.11059 elapsed time for k point: 0.24475812912 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 23 iterations. tefreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.48232, 0.50501, 0.630584, 0.799745, 0.866126, 0.900465, 1.09936, 1.11024 elapsed time for k point: 0.23560500145 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.487852, 0.531427, 0.598151, 0.814208, 0.865617, 0.875643, 1.10711, 1.10983 elapsed time for k point: 0.224999904633 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 19 iterations. tefreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.491236, 0.563106, 0.563151, 0.821423, 0.865195, 0.865231, 1.10923, 1.10941 elapsed time for k point: 0.195577144623 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 21 iterations. tefreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.446126, 0.532191, 0.637012, 0.806654, 0.86614, 0.893198, 1.10593, 1.10866 elapsed time for k point: 0.214761972427 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 22 iterations. tefreqs:, 13, -0.2, 0.2, 0, 0.4, 0.345267, 0.542882, 0.713396, 0.795022, 0.875814, 0.938821, 1.09707, 1.10904 elapsed time for k point: 0.226405143738 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 27 iterations. tefreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.233479, 0.553269, 0.768719, 0.792196, 0.912766, 0.987203, 1.08919, 1.11098 elapsed time for k point: 0.274473190308 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 33 iterations. tefreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.117556, 0.559323, 0.789736, 0.793576, 0.983043, 1.02374, 1.09661, 1.11448 elapsed time for k point: 0.3360850811 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 35 iterations. tefreqs:, 16, 0, 0, 0, 0, 0, 0.561229, 0.793929, 0.794659, 1.03341, 1.03342, 1.11597, 1.11681 elapsed time for k point: 0.28036904335 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.491235811868 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.473072239028 at Vector3<0.0, 0.5, 0.0> to 0.563105937871 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 3 range: 0.563150519856 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.793928939584 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.767661479904 at Vector3<0.0, 0.5, 0.0> to 0.821423004419 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.865194814442 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 1.03341300186 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.865230799494 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 1.03342309104 at Vector3<0.0, 0.0, 0.0> Band 7 range: 1.02136766911 at Vector3<0.0, 0.5, 0.0> to 1.11596699076 at Vector3<0.0, 0.0, 0.0> Band 8 range: 1.10866265854 at Vector3<-0.266666666667, 0.266666666667, 0.0> to 1.11681071913 at Vector3<0.0, 0.0, 0.0> Gap from band 2 (0.563105937871) to band 3 (0.563150519856), 0.00791684419559% Gap from band 4 (0.821423004419) to band 5 (0.865194814442), 5.1904835266% total elapsed time for run: 4.25611591339 done epsilon: 1-12, mean 2.59614, harm. mean 1.17149, 17.2852% > 1, 14.5104% "fill" .Read lattice vectors Read Bloch wavevector (0, 0, 0) Input lattice = (0.866025, 0.5, 0), (0.866025, -0.5, 0), (0, 0, 1) Output lattice = (2.59808, 1.5, 0), (1.29904, -2.25, 0), (0, 0, 3) Input data is rank 2, size 32x32x1. Output data 96x83x1 real part range: 1 .. 12 test_tri_rods: 6.55s test_triangular_lattice ======================== Initializing eigensolver data Computing 8 bands with 1e-12 tolerance Working in 2 dimensions. Grid size is 32 x 32 x 1. Solving for 8 bands at a time. Creating Maxwell data... Mesh size is 3. Lattice vectors: (0.866025, 0.5, 0) (0.866025, -0.5, 0) (0, 0, 1) Cell volume = 0.866025 Reciprocal lattice vectors (/ 2 pi): (0.57735, 1, -0) (0.57735, -1, 0) (-0, 0, 1) Geometric objects: cylinder, center = (0,0,0) radius 0.2, height 1e+20, axis (0, 0, 1) Geometric object tree has depth 1 and 1 object nodes (vs. 1 actual objects) Initializing epsilon function... Allocating fields... Solving for band polarization: tm. Initializing fields to random numbers... 16 k-points Vector3<0.0, 0.0, 0.0> Vector3<0.0, 0.1, 0.0> Vector3<0.0, 0.2, 0.0> Vector3<0.0, 0.3, 0.0> Vector3<0.0, 0.4, 0.0> Vector3<0.0, 0.5, 0.0> Vector3<-0.0666666666667, 0.466666666667, 0.0> Vector3<-0.133333333333, 0.433333333333, 0.0> Vector3<-0.2, 0.4, 0.0> Vector3<-0.266666666667, 0.366666666667, 0.0> Vector3<-0.333333333333, 0.333333333333, 0.0> Vector3<-0.266666666667, 0.266666666667, 0.0> Vector3<-0.2, 0.2, 0.0> Vector3<-0.133333333333, 0.133333333333, 0.0> Vector3<-0.0666666666667, 0.0666666666667, 0.0> Vector3<0.0, 0.0, 0.0> elapsed time for initialization: 0.00579214096069 solve_kpoint (0,0,0): tmfreqs:, k index, k1, k2, k3, kmag/2pi, tm band 1, tm band 2, tm band 3, tm band 4, tm band 5, tm band 6, tm band 7, tm band 8 Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 24 iterations. tmfreqs:, 1, 0, 0, 0, 0, 0, 0.560518, 0.560561, 0.593296, 0.837451, 0.837595, 0.994129, 1.09832 elapsed time for k point: 0.193866968155 solve_kpoint (0,0.1,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 18 iterations. tmfreqs:, 2, 0, 0.1, 0, 0.11547, 0.0711319, 0.538981, 0.559429, 0.617095, 0.834123, 0.839462, 0.988272, 1.08637 elapsed time for k point: 0.184727907181 solve_kpoint (0,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 15 iterations. tmfreqs:, 3, 0, 0.2, 0, 0.23094, 0.138898, 0.508574, 0.556587, 0.65398, 0.825087, 0.84452, 0.968999, 1.05281 elapsed time for k point: 0.155140161514 solve_kpoint (0,0.3,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 14 iterations. tmfreqs:, 4, 0, 0.3, 0, 0.34641, 0.198939, 0.479631, 0.553145, 0.693119, 0.813353, 0.850964, 0.932869, 1.02598 elapsed time for k point: 0.144778013229 solve_kpoint (0,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 5, 0, 0.4, 0, 0.46188, 0.244064, 0.4557, 0.550414, 0.730028, 0.80289, 0.856372, 0.891379, 1.01409 elapsed time for k point: 0.135182857513 solve_kpoint (0,0.5,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 6, 0, 0.5, 0, 0.57735, 0.262015, 0.445331, 0.549383, 0.749186, 0.797864, 0.85849, 0.870609, 1.01087 elapsed time for k point: 0.134917974472 solve_kpoint (-0.0666667,0.466667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 7, -0.0666667, 0.466667, 0, 0.581187, 0.262984, 0.4475, 0.545804, 0.752448, 0.797093, 0.860461, 0.870245, 0.99895 elapsed time for k point: 0.12507891655 solve_kpoint (-0.133333,0.433333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 8, -0.133333, 0.433333, 0, 0.592546, 0.265671, 0.453801, 0.535912, 0.761319, 0.795166, 0.866056, 0.869135, 0.973413 elapsed time for k point: 0.124973058701 solve_kpoint (-0.2,0.4,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 9, -0.2, 0.4, 0, 0.61101, 0.269404, 0.463648, 0.52172, 0.773443, 0.792931, 0.867201, 0.874681, 0.94487 elapsed time for k point: 0.105247020721 solve_kpoint (-0.266667,0.366667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 10 iterations. tmfreqs:, 10, -0.266667, 0.366667, 0, 0.635959, 0.273, 0.476141, 0.505606, 0.78524, 0.791235, 0.864672, 0.885801, 0.918597 elapsed time for k point: 0.105453014374 solve_kpoint (-0.333333,0.333333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 9 iterations. tmfreqs:, 11, -0.333333, 0.333333, 0, 0.666667, 0.27469, 0.489984, 0.490239, 0.79072, 0.790832, 0.863041, 0.899109, 0.89925 elapsed time for k point: 0.0953650474548 solve_kpoint (-0.266667,0.266667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 11 iterations. tmfreqs:, 12, -0.266667, 0.266667, 0, 0.533333, 0.2632, 0.47091, 0.51804, 0.764413, 0.795091, 0.864427, 0.896871, 0.932925 elapsed time for k point: 0.115037918091 solve_kpoint (-0.2,0.2,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 12 iterations. tmfreqs:, 13, -0.2, 0.2, 0, 0.4, 0.222593, 0.476537, 0.539917, 0.715636, 0.806516, 0.856013, 0.929969, 0.977199 elapsed time for k point: 0.124850988388 solve_kpoint (-0.133333,0.133333,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 13 iterations. tmfreqs:, 14, -0.133333, 0.133333, 0, 0.266667, 0.15856, 0.501245, 0.552927, 0.666818, 0.82116, 0.846938, 0.963589, 1.03113 elapsed time for k point: 0.13525390625 solve_kpoint (-0.0666667,0.0666667,0): Solving for bands 1 to 8... Finished solving for bands 1 to 8 after 17 iterations. tmfreqs:, 15, -0.0666667, 0.0666667, 0, 0.133333, 0.0819275, 0.534465, 0.558896, 0.622523, 0.832982, 0.840137, 0.98638, 1.08149 elapsed time for k point: 0.174446105957 solve_kpoint (0,0,0): Solving for bands 2 to 8... Finished solving for bands 2 to 8 after 16 iterations. tmfreqs:, 16, 0, 0, 0, 0, 0, 0.560518, 0.560561, 0.593296, 0.837451, 0.837595, 0.994129, 1.09832 .. ====================================================================== FAIL: test_output_efield_z (__main__.TestModeSolver) ---------------------------------------------------------------------- Traceback (most recent call last): File "./tests/mpb.py", line 435, in test_output_efield_z self.compare_h5_files(ref_path, res_path) File "./tests/mpb.py", line 191, in compare_h5_files compare_arrays(self, ref[k].value, res[k].value, tol=tol) File "/build/meep-1.7.0/python/tests/utils.py", line 15, in compare_arrays test_instance.assertLess(diff, tol) AssertionError: 0.0035191813738987736 not less than 0.001 ---------------------------------------------------------------------- Ran 45 tests in 708.991s FAILED (failures=1) elapsed time for k point: 0.131369829178 Band 1 range: 0.0 at Vector3<0.0, 0.0, 0.0> to 0.274690225862 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 2 range: 0.445331080847 at Vector3<0.0, 0.5, 0.0> to 0.560518142316 at Vector3<0.0, 0.0, 0.0> Band 3 range: 0.490238914903 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.56056079478 at Vector3<0.0, 0.0, 0.0> Band 4 range: 0.593296087359 at Vector3<0.0, 0.0, 0.0> to 0.790719597444 at Vector3<-0.333333333333, 0.333333333333, 0.0> Band 5 range: 0.790832076333 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 0.837451116754 at Vector3<0.0, 0.0, 0.0> Band 6 range: 0.837594852844 at Vector3<0.0, 0.0, 0.0> to 0.86720092649 at Vector3<-0.2, 0.4, 0.0> Band 7 range: 0.869134995574 at Vector3<-0.133333333333, 0.433333333333, 0.0> to 0.994129102266 at Vector3<0.0, 0.0, 0.0> Band 8 range: 0.899249909555 at Vector3<-0.333333333333, 0.333333333333, 0.0> to 1.09831835292 at Vector3<0.0, 0.0, 0.0> Gap from band 1 (0.274690225862) to band 2 (0.445331080847), 47.3988348385% Gap from band 3 (0.56056079478) to band 4 (0.593296087359), 5.6740646237% Gap from band 4 (0.790719597444) to band 5 (0.790832076333), 0.0142238651132% Gap from band 5 (0.837451116754) to band 6 (0.837594852844), 0.0171620472726% Gap from band 6 (0.86720092649) to band 7 (0.869134995574), 0.222775910928% total elapsed time for run: 2.19313192368 done test_triangular_lattice: 2.20s test_update_band_range_data ======================== test_update_band_range_data: 0.00s Elapsed run time = 709.0284 s FAIL tests/mpb.py (exit status: 1) FAIL: tests/multilevel_atom =========================== ----------- Initializing structure... Working in 1D dimensions. Computational cell is 0 x 0 x 3 with resolution 40 block, center = (0,0,-1) size (1e+20,1e+20,1) axes (1,0,0), (0,1,0), (0,0,1) dielectric constant epsilon diagonal = (2.25,2.25,2.25) time for set_epsilon = 0.000169992 s multilevel atom susceptibility ----------- Meep progress: 1188.575/7000.0 = 17.0% done in 4.0s, 19.6s to go on time step 95086 (time=1188.58), 4.20678e-05 s/step Meep progress: 2378.2875/7000.0 = 34.0% done in 8.0s, 15.5s to go on time step 190264 (time=2378.3), 4.20269e-05 s/step Meep progress: 3568.3125/7000.0 = 51.0% done in 12.0s, 11.5s to go on time step 285466 (time=3568.33), 4.2016e-05 s/step Meep progress: 4758.7875/7000.0 = 68.0% done in 16.0s, 7.5s to go on time step 380704 (time=4758.8), 4.20003e-05 s/step Meep progress: 5949.5875/7000.0 = 85.0% done in 20.0s, 3.5s to go on time step 475968 (time=5949.6), 4.19886e-05 s/step F Field time usage: connecting chunks: 0.000207901 s time stepping: 15.264 s communicating: 1.25085 s Fourier transforming: 0.110407 s everything else: 6.91215 s ====================================================================== FAIL: test_multilevel_atom (__main__.TestMultiLevelAtom) ---------------------------------------------------------------------- Traceback (most recent call last): File "./tests/multilevel_atom.py", line 66, in test_multilevel_atom sim.run(mp.at_end(check_field), until=7000) File "/build/meep-1.7.0/python/meep/simulation.py", line 1712, in run self._run_until(until, step_funcs) File "/build/meep-1.7.0/python/meep/simulation.py", line 1094, in _run_until _eval_step_func(self, func, 'finish') File "/build/meep-1.7.0/python/meep/simulation.py", line 1929, in _eval_step_func func(sim, todo) File "/build/meep-1.7.0/python/meep/simulation.py", line 1981, in _end _eval_step_func(sim, func, 'step') File "/build/meep-1.7.0/python/meep/simulation.py", line 1927, in _eval_step_func func(sim) File "./tests/multilevel_atom.py", line 62, in check_field self.assertAlmostEqual(fp, -2.7110969214986387) AssertionError: -0.04452311652305546 != -2.7110969214986387 within 7 places ---------------------------------------------------------------------- Ran 1 test in 23.540s FAILED (failures=1) Elapsed run time = 23.5421 s FAIL tests/multilevel_atom.py (exit status: 1) make[1]: Leaving directory '/build/meep-1.7.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with autoreconf dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/meep-1.7.0' dh_installchangelogs NEWS.md dh_auto_install make -j1 install DESTDIR=/build/meep-1.7.0/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/meep-1.7.0' Making install in src make[3]: Entering directory '/build/meep-1.7.0/src' make install-am make[4]: Entering directory '/build/meep-1.7.0/src' make[5]: Entering directory '/build/meep-1.7.0/src' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libmeep.so.12.0.0 /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.so.12.0.0 libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libmeep.so.12.0.0 libmeep.so.12 || { rm -f libmeep.so.12 && ln -s libmeep.so.12.0.0 libmeep.so.12; }; }) libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libmeep.so.12.0.0 libmeep.so || { rm -f libmeep.so && ln -s libmeep.so.12.0.0 libmeep.so; }; }) libtool: install: /usr/bin/install -c .libs/libmeep.lai /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.la libtool: install: /usr/bin/install -c .libs/libmeep.a /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a libtool: install: chmod 644 /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeep.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/include' /usr/bin/install -c -m 644 meep.hpp '/build/meep-1.7.0/debian/tmp/usr/include' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 meep/mympi.hpp meep/vec.hpp '/build/meep-1.7.0/debian/tmp/usr/include/meep' make[5]: Leaving directory '/build/meep-1.7.0/src' make[4]: Leaving directory '/build/meep-1.7.0/src' make[3]: Leaving directory '/build/meep-1.7.0/src' Making install in tests make[3]: Entering directory '/build/meep-1.7.0/tests' make[4]: Entering directory '/build/meep-1.7.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meep-1.7.0/tests' make[3]: Leaving directory '/build/meep-1.7.0/tests' Making install in scheme make[3]: Entering directory '/build/meep-1.7.0/scheme' make install-am make[4]: Entering directory '/build/meep-1.7.0/scheme' make[5]: Entering directory '/build/meep-1.7.0/scheme' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c meep '/build/meep-1.7.0/debian/tmp/usr/bin' libtool: warning: '../src/libmeep.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/meep /build/meep-1.7.0/debian/tmp/usr/bin/meep /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/share/meep' /usr/bin/install -c -m 644 meep.scm meep-enums.scm casimir.scm materials.scm '/build/meep-1.7.0/debian/tmp/usr/share/meep' make[5]: Leaving directory '/build/meep-1.7.0/scheme' make[4]: Leaving directory '/build/meep-1.7.0/scheme' make[3]: Leaving directory '/build/meep-1.7.0/scheme' Making install in libmeepgeom make[3]: Entering directory '/build/meep-1.7.0/libmeepgeom' make[4]: Entering directory '/build/meep-1.7.0/libmeepgeom' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libmeepgeom.la '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: warning: relinking 'libmeepgeom.la' libtool: install: (cd /build/meep-1.7.0/libmeepgeom; /bin/bash "/build/meep-1.7.0/libtool" --tag CXX --mode=relink aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o libmeepgeom.la -rpath /usr/lib/aarch64-linux-gnu meepgeom.lo GDSIIgeom.lo ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -inst-prefix-dir /build/meep-1.7.0/debian/tmp) libtool: relink: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/meepgeom.o .libs/GDSIIgeom.o -L/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -lmeep -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libmeepgeom.so.12 -o .libs/libmeepgeom.so.12.0.0 libtool: install: /usr/bin/install -c .libs/libmeepgeom.so.12.0.0T /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libmeepgeom.so.12.0.0 libmeepgeom.so.12 || { rm -f libmeepgeom.so.12 && ln -s libmeepgeom.so.12.0.0 libmeepgeom.so.12; }; }) libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libmeepgeom.so.12.0.0 libmeepgeom.so || { rm -f libmeepgeom.so && ln -s libmeepgeom.so.12.0.0 libmeepgeom.so; }; }) libtool: install: /usr/bin/install -c .libs/libmeepgeom.lai /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeepgeom.la libtool: install: /usr/bin/install -c .libs/libmeepgeom.a /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeepgeom.a libtool: install: chmod 644 /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeepgeom.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libmeepgeom.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 meepgeom.hpp material_data.hpp '/build/meep-1.7.0/debian/tmp/usr/include/meep' make[4]: Leaving directory '/build/meep-1.7.0/libmeepgeom' make[3]: Leaving directory '/build/meep-1.7.0/libmeepgeom' Making install in libpympb make[3]: Entering directory '/build/meep-1.7.0/libpympb' make[4]: Entering directory '/build/meep-1.7.0/libpympb' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libpympb.la '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: warning: relinking 'libpympb.la' libtool: install: (cd /build/meep-1.7.0/libpympb; /bin/bash "/build/meep-1.7.0/libtool" --tag CXX --mode=relink aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o libpympb.la -rpath /usr/lib/aarch64-linux-gnu libpympb_la-pympb.lo ../src/libmeep.la -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -inst-prefix-dir /build/meep-1.7.0/debian/tmp) libtool: relink: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/libpympb_la-pympb.o -L/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -lmeep -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libpympb.so.12 -o .libs/libpympb.so.12.0.0 libtool: install: /usr/bin/install -c .libs/libpympb.so.12.0.0T /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libpympb.so.12.0.0 libpympb.so.12 || { rm -f libpympb.so.12 && ln -s libpympb.so.12.0.0 libpympb.so.12; }; }) libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libpympb.so.12.0.0 libpympb.so || { rm -f libpympb.so && ln -s libpympb.so.12.0.0 libpympb.so; }; }) libtool: install: /usr/bin/install -c .libs/libpympb.lai /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libpympb.la libtool: install: /usr/bin/install -c .libs/libpympb.a /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libpympb.a libtool: install: chmod 644 /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libpympb.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/libpympb.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 pympb.hpp '/build/meep-1.7.0/debian/tmp/usr/include/meep' make[4]: Leaving directory '/build/meep-1.7.0/libpympb' make[3]: Leaving directory '/build/meep-1.7.0/libpympb' Making install in python make[3]: Entering directory '/build/meep-1.7.0/python' /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi make install-am make[4]: Entering directory '/build/meep-1.7.0/python' /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi mkdir -p meep cp __init__.py ./geom.py ./simulation.py ./source.py ./materials.py .libs/_meep.so meep mkdir -p meep/mpb cp .libs/_mpb.so meep/mpb cp ./mpb.py meep/mpb/__init__.py cp ./solver.py ./mpb_data.py meep/mpb make[5]: Entering directory '/build/meep-1.7.0/python' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep' /bin/bash ../libtool --mode=install /usr/bin/install -c _meep.la '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep' libtool: warning: relinking '_meep.la' libtool: install: (cd /build/meep-1.7.0/python; /bin/bash "/build/meep-1.7.0/libtool" --tag CXX --mode=relink aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o _meep.la -rpath /usr/lib/python2.7/dist-packages/meep _meep_la-meep-python.lo ../src/libmeep.la ../libmeepgeom/libmeepgeom.la -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -inst-prefix-dir /build/meep-1.7.0/debian/tmp) libtool: relink: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/_meep_la-meep-python.o -L/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -lmeep -lmeepgeom -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_meep.so.12 -o .libs/_meep.so.12.0.0 libtool: install: /usr/bin/install -c .libs/_meep.so.12.0.0T /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep && { ln -s -f _meep.so.12.0.0 _meep.so.12 || { rm -f _meep.so.12 && ln -s _meep.so.12.0.0 _meep.so.12; }; }) libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep && { ln -s -f _meep.so.12.0.0 _meep.so || { rm -f _meep.so && ln -s _meep.so.12.0.0 _meep.so; }; }) libtool: install: /usr/bin/install -c .libs/_meep.lai /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/_meep.la libtool: install: /usr/bin/install -c .libs/_meep.a /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/_meep.a libtool: install: chmod 644 /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/_meep.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/_meep.a libtool: warning: remember to run 'libtool --finish /usr/lib/python2.7/dist-packages/meep' /bin/bash: git: command not found cp meep.py __init__.py echo "__version__ = ''" >> __init__.py if [[ "3.0.12" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "3.0.12" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep' /usr/bin/install -c -m 644 geom.py __init__.py source.py simulation.py materials.py '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep' Byte-compiling python modules... geom.py__init__.pysource.pysimulation.pymaterials.py Byte-compiling python modules (optimized versions) ... geom.py__init__.pysource.pysimulation.pymaterials.py /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb' /usr/bin/install -c -m 644 mpb.py solver.py mpb_data.py '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb' /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb' /bin/bash ../libtool --mode=install /usr/bin/install -c _mpb.la '/build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb' libtool: warning: relinking '_mpb.la' libtool: install: (cd /build/meep-1.7.0/python; /bin/bash "/build/meep-1.7.0/libtool" --tag CXX --mode=relink aarch64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/meep-1.7.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -W -module -version-info 12:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -o _mpb.la -rpath /usr/lib/python2.7/dist-packages/meep/mpb _mpb_la-mpb-python.lo ../libmeepgeom/libmeepgeom.la ../libpympb/libpympb.la -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lcblas -lf77blas -latlas -lfftw3 -lm -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -inst-prefix-dir /build/meep-1.7.0/debian/tmp) libtool: relink: aarch64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/_mpb_la-mpb-python.o -L/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -lmeepgeom -lpympb -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lcblas -lf77blas -latlas -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_mpb.so.12 -o .libs/_mpb.so.12.0.0 libtool: install: /usr/bin/install -c .libs/_mpb.so.12.0.0T /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb && { ln -s -f _mpb.so.12.0.0 _mpb.so.12 || { rm -f _mpb.so.12 && ln -s _mpb.so.12.0.0 _mpb.so.12; }; }) libtool: install: (cd /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb && { ln -s -f _mpb.so.12.0.0 _mpb.so || { rm -f _mpb.so && ln -s _mpb.so.12.0.0 _mpb.so; }; }) libtool: install: /usr/bin/install -c .libs/_mpb.lai /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.la libtool: install: /usr/bin/install -c .libs/_mpb.a /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.a libtool: install: chmod 644 /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.a libtool: install: aarch64-linux-gnu-ranlib /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.a libtool: warning: remember to run 'libtool --finish /usr/lib/python2.7/dist-packages/meep/mpb' make install-data-hook make[6]: Entering directory '/build/meep-1.7.0/python' mv /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/mpb.py /build/meep-1.7.0/debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/__init__.py make[6]: Leaving directory '/build/meep-1.7.0/python' make[5]: Leaving directory '/build/meep-1.7.0/python' make[4]: Leaving directory '/build/meep-1.7.0/python' make[3]: Leaving directory '/build/meep-1.7.0/python' make[3]: Entering directory '/build/meep-1.7.0' make[4]: Entering directory '/build/meep-1.7.0' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 meep.pc '/build/meep-1.7.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' make[4]: Leaving directory '/build/meep-1.7.0' make[3]: Leaving directory '/build/meep-1.7.0' make[2]: Leaving directory '/build/meep-1.7.0' rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/*.pyc rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/*.pyo rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/*.a rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/*.la rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/*.pyc rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/*.pyo rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/*.a rm -f debian/tmp/usr/lib/python2.7/dist-packages/meep/mpb/*.la make[1]: Leaving directory '/build/meep-1.7.0' dh_install dh_installdocs dh_installchangelogs dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: symbol dimensions used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol create_geom_box_tree0 used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol material_of_unshifted_point_in_tree_inobject used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol ensure_periodicity used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol geometry_center used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol make_sphere used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol default_material used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol geometry_lattice used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol object_of_point_in_tree used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol vector3_minus used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: symbol geom_fix_object used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol display_geometric_object_info used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol normal_to_fixed_object used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN9meep_geom7is_fileEPv used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol matrix3x3_inverse used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol geom_box_tree_stats used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol vector3_norm used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol matrix3x3_transpose used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol vector3_plus used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol matrix3x3_determinant used by debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 found in none of the libraries dpkg-shlibdeps: warning: 27 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeep.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 were not linked against libcblas.so.3 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeep.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 were not linked against libz.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeep.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 were not linked against libgfortran.so.5 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeep.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 were not linked against libatlas.so.3 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeep.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libmeepgeom.so.12.0.0 debian/libmeep12/usr/lib/aarch64-linux-gnu/libpympb.so.12.0.0 were not linked against libgslcblas.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: 111 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 97 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libcblas.so.3 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libharminv.so.3 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libatlas.so.3 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libhdf5_serial.so.103 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libgfortran.so.5 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libgsl.so.23 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libz.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-meep/usr/lib/python2.7/dist-packages/meep/_meep.so.12.0.0 debian/python-meep/usr/lib/python2.7/dist-packages/meep/mpb/_mpb.so.12.0.0 were not linked against libgslcblas.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libhdf5_serial.so.103 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libharminv.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libgfortran.so.5 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libcblas.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libatlas.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libgslcblas.so.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libgsl.so.23 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libf77blas.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against liblapack.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libfftw3.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libgc.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/meep/usr/bin/meep was not linked against libz.so.1 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'meep-dbgsym' in '../meep-dbgsym_1.7.0-3_arm64.deb'. dpkg-deb: building package 'meep' in '../meep_1.7.0-3_arm64.deb'. dpkg-deb: building package 'libmeep12' in '../libmeep12_1.7.0-3_arm64.deb'. dpkg-deb: building package 'libmeep12-dbgsym' in '../libmeep12-dbgsym_1.7.0-3_arm64.deb'. dpkg-deb: building package 'python-meep-dbgsym' in '../python-meep-dbgsym_1.7.0-3_arm64.deb'. dpkg-deb: building package 'python-meep' in '../python-meep_1.7.0-3_arm64.deb'. dpkg-deb: building package 'libmeep-dev' in '../libmeep-dev_1.7.0-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../meep_1.7.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/20805 and its subdirectories I: Current time: Sun Aug 9 10:19:14 -12 2020 I: pbuilder-time-stamp: 1597011554