I: pbuilder: network access will be disabled during build I: Current time: Sun Oct 4 14:11:05 +14 2020 I: pbuilder-time-stamp: 1601770265 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [jmodeltest_2.1.10+dfsg-7.dsc] I: copying [./jmodeltest_2.1.10+dfsg.orig.tar.xz] I: copying [./jmodeltest_2.1.10+dfsg-7.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Dec 18 22:20:13 2018 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./jmodeltest_2.1.10+dfsg-7.dsc dpkg-source: info: extracting jmodeltest in jmodeltest-2.1.10+dfsg dpkg-source: info: unpacking jmodeltest_2.1.10+dfsg.orig.tar.xz dpkg-source: info: unpacking jmodeltest_2.1.10+dfsg-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_jars.patch dpkg-source: info: applying do_not_chmod_anything_in_usr_bin.patch dpkg-source: info: applying adapt_config.patch dpkg-source: info: applying replace_natbib_bst_by_plainnat.patch dpkg-source: info: applying remove_BrowserLauncher_reference.patch dpkg-source: info: applying latex_encoding.patch dpkg-source: info: applying fix_alter-lib.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D01_modify_environment starting debug: Running on codethink-sled12-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.0.3(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/var/lib/jenkins HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3791 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.VAVrNzUCxX/pbuilderrc_axSb --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.VAVrNzUCxX/b2 --logfile b2/build.log jmodeltest_2.1.10+dfsg-7.dsc' SUDO_GID=117 SUDO_UID=110 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root USERNAME=root _='I: set' http_proxy=http://192.168.101.16:3128 I: uname -a Linux i-capture-the-hostname 4.4.0-190-generic #220-Ubuntu SMP Fri Aug 28 23:03:33 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 18 2019 bash -rwxr-xr-x 3 root root 34808 Jul 11 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 11 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 11 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 11 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore -rwxr-xr-x 1 root root 35576 Mar 1 2019 cat -rwxr-xr-x 1 root root 60256 Mar 1 2019 chgrp -rwxr-xr-x 1 root root 56096 Mar 1 2019 chmod -rwxr-xr-x 1 root root 64368 Mar 1 2019 chown -rwxr-xr-x 1 root root 134632 Mar 1 2019 cp -rwxr-xr-x 1 root root 129536 Jan 18 2019 dash -rwxr-xr-x 1 root root 97136 Mar 1 2019 date -rwxr-xr-x 1 root root 76736 Mar 1 2019 dd -rwxr-xr-x 1 root root 93752 Mar 1 2019 df -rwxr-xr-x 1 root root 138848 Mar 1 2019 dir -rwxr-xr-x 1 root root 75984 Jan 10 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Mar 1 2019 echo -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep -rwxr-xr-x 1 root root 27256 Mar 1 2019 false -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 10 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 23 09:38 fusermount -rwxr-xr-x 1 root root 174304 Jan 8 2019 grep -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 6 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 27 2018 hostname -rwxr-xr-x 1 root root 64472 Mar 1 2019 ln -rwxr-xr-x 1 root root 52544 Jul 27 2018 login -rwxr-xr-x 1 root root 138848 Mar 1 2019 ls -rwxr-xr-x 1 root root 108552 Jan 10 2019 lsblk -rwxr-xr-x 1 root root 76840 Mar 1 2019 mkdir -rwxr-xr-x 1 root root 64480 Mar 1 2019 mknod -rwxr-xr-x 1 root root 39736 Mar 1 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 10 2019 more -rwsr-xr-x 1 root root 47112 Jan 10 2019 mount -rwxr-xr-x 1 root root 14344 Jan 10 2019 mountpoint -rwxr-xr-x 1 root root 138736 Mar 1 2019 mv lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Mar 1 2019 pwd lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Mar 1 2019 readlink -rwxr-xr-x 1 root root 68440 Mar 1 2019 rm -rwxr-xr-x 1 root root 39624 Mar 1 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 22 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Oct 4 14:11 sh -> bash lrwxrwxrwx 1 root root 4 Sep 21 22:27 sh.distrib -> dash -rwxr-xr-x 1 root root 31384 Mar 1 2019 sleep -rwxr-xr-x 1 root root 72480 Mar 1 2019 stty -rwsr-xr-x 1 root root 59424 Jan 10 2019 su -rwxr-xr-x 1 root root 31416 Mar 1 2019 sync -rwxr-xr-x 1 root root 449416 Apr 24 2019 tar -rwxr-xr-x 1 root root 10560 Jan 22 2019 tempfile -rwxr-xr-x 1 root root 88968 Mar 1 2019 touch -rwxr-xr-x 1 root root 27256 Mar 1 2019 true -rwxr-xr-x 1 root root 14264 Apr 23 09:38 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 10 2019 umount -rwxr-xr-x 1 root root 31384 Mar 1 2019 uname -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress -rwxr-xr-x 1 root root 138848 Mar 1 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 10 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 22 2019 which lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew I: user script /srv/workspace/pbuilder/3791/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), javahelper, default-jdk, ant, alter-sequence-alignment, libfreemarker-java, libjcommon-java, libjfreechart-java, libmpj-java, libpal-java, prottest, texlive-latex-base, texlive-fonts-recommended, texlive-latex-recommended dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on javahelper; however: Package javahelper is not installed. pbuilder-satisfydepends-dummy depends on default-jdk; however: Package default-jdk is not installed. pbuilder-satisfydepends-dummy depends on ant; however: Package ant is not installed. pbuilder-satisfydepends-dummy depends on alter-sequence-alignment; however: Package alter-sequence-alignment is not installed. pbuilder-satisfydepends-dummy depends on libfreemarker-java; however: Package libfreemarker-java is not installed. pbuilder-satisfydepends-dummy depends on libjcommon-java; however: Package libjcommon-java is not installed. pbuilder-satisfydepends-dummy depends on libjfreechart-java; however: Package libjfreechart-java is not installed. pbuilder-satisfydepends-dummy depends on libmpj-java; however: Package libmpj-java is not installed. pbuilder-satisfydepends-dummy depends on libpal-java; however: Package libpal-java is not installed. pbuilder-satisfydepends-dummy depends on prottest; however: Package prottest is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-base; however: Package texlive-latex-base is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: alter-sequence-alignment{a} ant{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk{a} default-jdk-headless{a} default-jre{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dirmngr{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lmodern{a} gettext{a} gettext-base{a} gnupg{a} gnupg-l10n{a} gnupg-utils{a} gpg{a} gpg-agent{a} gpg-wks-client{a} gpg-wks-server{a} gpgconf{a} gpgsm{a} groff-base{a} intltool-debian{a} java-common{a} java-wrappers{a} javahelper{a} libapache-pom-java{a} libarchive-zip-perl{a} libasound2{a} libasound2-data{a} libassuan0{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libb-hooks-op-check-perl{a} libbrotli1{a} libbsd0{a} libcairo2{a} libclass-method-modifiers-perl{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-io-java{a} libcommons-parent-java{a} libcroco3{a} libcups2{a} libcupsimage2{a} libdbus-1-3{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-etnaviv1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libdynaloader-functions-perl{a} libedit2{a} libelf1{a} libencode-locale-perl{a} libevent-2.1-6{a} libevent-core-2.1-6{a} libevent-pthreads-2.1-6{a} libexpat1{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreemarker-java{a} libfreetype6{a} libgfortran5{a} libgif7{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgs9{a} libgs9-common{a} libgssapi-krb5-2{a} libharfbuzz-icu0{a} libharfbuzz0b{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhwloc-plugins{a} libhwloc5{a} libibverbs1{a} libice6{a} libicu63{a} libidn11{a} libijs-0.35{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libjbig0{a} libjbig2dec0{a} libjcommon-java{a} libjfreechart-java{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} libksba8{a} liblcms2-2{a} libldap-2.4-2{a} libldap-common{a} libllvm7{a} liblog4j1.2-java{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libmodule-runtime-perl{a} libmoo-perl{a} libmpdec2{a} libmpj-java{a} libncurses6{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnl-3-200{a} libnl-route-3-200{a} libnpth0{a} libnspr4{a} libnss3{a} libnuma1{a} libopenjp2-7{a} libopenmpi3{a} libpal-java{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libpciaccess0{a} libpcsclite1{a} libpipeline1{a} libpixman-1-0{a} libpmix2{a} libpng16-16{a} libpotrace0{a} libptexenc1{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm6{a} libssl1.1{a} libstrictures-perl{a} libsub-exporter-progressive-perl{a} libsub-quote-perl{a} libsynctex2{a} libteckit0{a} libtexlua52{a} libtexlua53{a} libtiff5{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwebp6{a} libwoff1{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxt6{a} libxtst6{a} libxxf86vm1{a} libxxhash0{a} libzzip-0-13{a} lsb-base{a} m4{a} man-db{a} mime-support{a} netbase{a} ocl-icd-libopencl1{a} openjdk-11-jdk{a} openjdk-11-jdk-headless{a} openjdk-11-jre{a} openjdk-11-jre-headless{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} patchutils{a} perl-openssl-defaults{a} phyml{a} pinentry-curses{a} po-debconf{a} poppler-data{a} prottest{a} python3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-recommended{a} ucf{a} unzip{a} wdiff{a} x11-common{a} xdg-utils{a} The following packages are RECOMMENDED but will NOT be installed: ant-optional at curl dbus debian-keyring dput dput-ng dupload equivs fonts-dejavu-extra fonts-droid-fallback ibverbs-providers krb5-locales libarchive-cpio-perl libatk-wrapper-java-jni libclass-xsaccessor-perl libcupsfilters1 libdata-dump-perl libdistro-info-perl libfile-mimeinfo-perl libgit-wrapper-perl libgitlab-api-v4-perl libglib2.0-data libgpm2 libhtml-form-perl libhtml-format-perl libhttp-daemon-perl liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnet-dbus-perl libopenmpi-dev libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libsub-name-perl libx11-protocol-perl libxt-dev licensecheck lintian lmodern lynx python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg shared-mime-info strace tex-gyre tipa wget x11-utils x11-xserver-utils xauth xdg-user-dirs 0 packages upgraded, 262 newly installed, 0 to remove and 0 not upgraded. Need to get 390 MB of archives. After unpacking 1040 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 poppler-data all 0.4.9-2 [1473 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 libpython3.7-minimal arm64 3.7.3-2+deb10u2 [588 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 python3.7-minimal arm64 3.7.3-2+deb10u2 [1404 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 python3-minimal arm64 3.7.3-1 [36.6 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 libmpdec2 arm64 2.4.2-2 [77.7 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 libpython3.7-stdlib arm64 3.7.3-2+deb10u2 [1641 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 python3.7 arm64 3.7.3-2+deb10u2 [330 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libpython3-stdlib arm64 3.7.3-1 [20.0 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 python3 arm64 3.7.3-1 [61.5 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 ucf all 3.0038+nmu1 [69.0 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 tex-common all 6.11 [53.1 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 netbase all 5.6 [19.4 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 libedit2 arm64 3.1-20181209-1 [91.2 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 libkrb5support0 arm64 1.17-3 [64.7 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 libk5crypto3 arm64 1.17-3 [122 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 libkrb5-3 arm64 1.17-3 [353 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 libgssapi-krb5-2 arm64 1.17-3 [150 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 openssh-client arm64 1:7.9p1-10+deb10u2 [757 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 openssl arm64 1.1.1d-0+deb10u3 [823 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 ca-certificates all 20190110 [157 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 libnspr4 arm64 2:4.20-1 [105 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 libnss3 arm64 2:3.42.1-1+deb10u3 [1082 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 ca-certificates-java all 20190405 [15.7 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 java-common all 0.71 [14.4 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 libavahi-common-data arm64 0.7-4+b1 [122 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 libavahi-common3 arm64 0.7-4+b1 [53.5 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 libdbus-1-3 arm64 1.12.20-0+deb10u1 [206 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 libavahi-client3 arm64 0.7-4+b1 [56.8 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 libcups2 arm64 2.2.10-6+deb10u3 [310 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 liblcms2-2 arm64 2.9-3 [137 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 libjpeg62-turbo arm64 1:1.5.2-2+b1 [115 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 libpng16-16 arm64 1.6.36-6 [287 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libfreetype6 arm64 2.9.1-3+deb10u1 [355 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 fontconfig-config all 2.13.1-2 [280 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 libfontconfig1 arm64 2.13.1-2 [343 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 libasound2-data all 1.1.8-1 [59.6 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 libasound2 arm64 1.1.8-1 [333 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 libpcsclite1 arm64 1.8.24-1 [58.1 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 libxau6 arm64 1:1.0.8-1+b2 [19.3 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 libxcb1 arm64 1.13.1-2 [135 kB] Get: 60 http://deb.debian.org/debian buster/main arm64 libx11-data all 2:1.6.7-1+deb10u1 [294 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 libx11-6 arm64 2:1.6.7-1+deb10u1 [734 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 libxext6 arm64 2:1.3.3-1+b2 [48.6 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 libxi6 arm64 2:1.7.9-1 [79.0 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 libxrender1 arm64 1:0.9.10-1 [30.4 kB] Get: 65 http://deb.debian.org/debian buster/main arm64 lsb-base all 10.2019051400 [28.4 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 x11-common all 1:7.7+19 [251 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 libxtst6 arm64 2:1.2.3-1 [26.7 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 openjdk-11-jre-headless arm64 11.0.8+10-1~deb10u1 [36.4 MB] Get: 69 http://deb.debian.org/debian buster/main arm64 default-jre-headless arm64 2:1.11-71 [10.9 kB] Get: 70 http://deb.debian.org/debian buster/main arm64 libglvnd0 arm64 1.1.0-1 [42.4 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 libdrm-common all 2.4.97-1 [13.8 kB] Get: 72 http://deb.debian.org/debian buster/main arm64 libdrm2 arm64 2.4.97-1 [39.5 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 libglapi-mesa arm64 18.3.6-2+deb10u1 [74.8 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libx11-xcb1 arm64 2:1.6.7-1+deb10u1 [190 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libxcb-dri2-0 arm64 1.13.1-2 [101 kB] Get: 76 http://deb.debian.org/debian buster/main arm64 libxcb-dri3-0 arm64 1.13.1-2 [100 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 libxcb-glx0 arm64 1.13.1-2 [116 kB] Get: 78 http://deb.debian.org/debian buster/main arm64 libxcb-present0 arm64 1.13.1-2 [99.1 kB] Get: 79 http://deb.debian.org/debian buster/main arm64 libxcb-sync1 arm64 1.13.1-2 [102 kB] Get: 80 http://deb.debian.org/debian buster/main arm64 libxfixes3 arm64 1:5.0.3-1 [21.0 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 libxdamage1 arm64 1:1.1.4-3+b3 [14.8 kB] Get: 82 http://deb.debian.org/debian buster/main arm64 libxshmfence1 arm64 1.3-1 [8712 B] Get: 83 http://deb.debian.org/debian buster/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b2 [20.1 kB] Get: 84 http://deb.debian.org/debian buster/main arm64 libdrm-amdgpu1 arm64 2.4.97-1 [26.6 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 libdrm-etnaviv1 arm64 2.4.97-1 [21.0 kB] Get: 86 http://deb.debian.org/debian buster/main arm64 libdrm-nouveau2 arm64 2.4.97-1 [25.5 kB] Get: 87 http://deb.debian.org/debian buster/main arm64 libdrm-radeon1 arm64 2.4.97-1 [30.0 kB] Get: 88 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 89 http://deb.debian.org/debian buster/main arm64 libllvm7 arm64 1:7.0.1-8+deb10u2 [10.8 MB] Get: 90 http://deb.debian.org/debian buster/main arm64 libsensors-config all 1:3.5.0-3 [31.6 kB] Get: 91 http://deb.debian.org/debian buster/main arm64 libsensors5 arm64 1:3.5.0-3 [51.8 kB] Get: 92 http://deb.debian.org/debian buster/main arm64 libgl1-mesa-dri arm64 18.3.6-2+deb10u1 [4910 kB] Get: 93 http://deb.debian.org/debian buster/main arm64 libglx-mesa0 arm64 18.3.6-2+deb10u1 [180 kB] Get: 94 http://deb.debian.org/debian buster/main arm64 libglx0 arm64 1.1.0-1 [29.0 kB] Get: 95 http://deb.debian.org/debian buster/main arm64 libgl1 arm64 1.1.0-1 [92.5 kB] Get: 96 http://deb.debian.org/debian buster/main arm64 libgif7 arm64 5.1.4-3 [41.7 kB] Get: 97 http://deb.debian.org/debian buster/main arm64 openjdk-11-jre arm64 11.0.8+10-1~deb10u1 [32.8 kB] Get: 98 http://deb.debian.org/debian buster/main arm64 default-jre arm64 2:1.11-71 [1044 B] Get: 99 http://deb.debian.org/debian buster/main arm64 alter-sequence-alignment all 1.3.4-2 [758 kB] Get: 100 http://deb.debian.org/debian buster/main arm64 ant all 1.10.5-2 [2082 kB] Get: 101 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 102 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 103 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 104 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 105 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 106 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 107 http://deb.debian.org/debian buster/main arm64 dctrl-tools arm64 2.24-3 [101 kB] Get: 108 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 109 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 110 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 111 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 112 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 113 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 114 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 115 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 116 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 117 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 118 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 119 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 120 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 121 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 122 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 123 http://deb.debian.org/debian buster/main arm64 openjdk-11-jdk-headless arm64 11.0.8+10-1~deb10u1 [206 MB] Get: 124 http://deb.debian.org/debian buster/main arm64 default-jdk-headless arm64 2:1.11-71 [1104 B] Get: 125 http://deb.debian.org/debian buster/main arm64 openjdk-11-jdk arm64 11.0.8+10-1~deb10u1 [2202 kB] Get: 126 http://deb.debian.org/debian buster/main arm64 default-jdk arm64 2:1.11-71 [1056 B] Get: 127 http://deb.debian.org/debian buster/main arm64 libassuan0 arm64 2.5.2-1 [47.1 kB] Get: 128 http://deb.debian.org/debian buster/main arm64 gpgconf arm64 2.2.12-1+deb10u1 [503 kB] Get: 129 http://deb.debian.org/debian buster/main arm64 libksba8 arm64 1.3.5-2 [84.7 kB] Get: 130 http://deb.debian.org/debian buster/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1+deb10u1 [69.3 kB] Get: 131 http://deb.debian.org/debian buster/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1+deb10u1 [105 kB] Get: 132 http://deb.debian.org/debian buster/main arm64 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 133 http://deb.debian.org/debian buster/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3+deb10u2 [216 kB] Get: 134 http://deb.debian.org/debian buster/main arm64 libnpth0 arm64 1.6-1 [17.6 kB] Get: 135 http://deb.debian.org/debian buster/main arm64 dirmngr arm64 2.2.12-1+deb10u1 [694 kB] Get: 136 http://deb.debian.org/debian buster/main arm64 gnupg-l10n all 2.2.12-1+deb10u1 [1010 kB] Get: 137 http://deb.debian.org/debian buster/main arm64 gnupg-utils arm64 2.2.12-1+deb10u1 [824 kB] Get: 138 http://deb.debian.org/debian buster/main arm64 gpg arm64 2.2.12-1+deb10u1 [827 kB] Get: 139 http://deb.debian.org/debian buster/main arm64 pinentry-curses arm64 1.1.0-2 [62.7 kB] Get: 140 http://deb.debian.org/debian buster/main arm64 gpg-agent arm64 2.2.12-1+deb10u1 [601 kB] Get: 141 http://deb.debian.org/debian buster/main arm64 gpg-wks-client arm64 2.2.12-1+deb10u1 [478 kB] Get: 142 http://deb.debian.org/debian buster/main arm64 gpg-wks-server arm64 2.2.12-1+deb10u1 [472 kB] Get: 143 http://deb.debian.org/debian buster/main arm64 gpgsm arm64 2.2.12-1+deb10u1 [587 kB] Get: 144 http://deb.debian.org/debian buster/main arm64 gnupg all 2.2.12-1+deb10u1 [715 kB] Get: 145 http://deb.debian.org/debian buster/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get: 146 http://deb.debian.org/debian buster/main arm64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get: 147 http://deb.debian.org/debian buster/main arm64 libio-pty-perl arm64 1:1.08-1.1+b5 [32.8 kB] Get: 148 http://deb.debian.org/debian buster/main arm64 libipc-run-perl all 20180523.0-1 [101 kB] Get: 149 http://deb.debian.org/debian buster/main arm64 libclass-method-modifiers-perl all 2.12-1 [18.6 kB] Get: 150 http://deb.debian.org/debian buster/main arm64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get: 151 http://deb.debian.org/debian buster/main arm64 libdevel-globaldestruction-perl all 0.14-1 [8084 B] Get: 152 http://deb.debian.org/debian buster/main arm64 libb-hooks-op-check-perl arm64 0.22-1+b1 [11.4 kB] Get: 153 http://deb.debian.org/debian buster/main arm64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get: 154 http://deb.debian.org/debian buster/main arm64 libdevel-callchecker-perl arm64 0.008-1 [15.6 kB] Get: 155 http://deb.debian.org/debian buster/main arm64 libparams-classify-perl arm64 0.015-1+b1 [25.4 kB] Get: 156 http://deb.debian.org/debian buster/main arm64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get: 157 http://deb.debian.org/debian buster/main arm64 libimport-into-perl all 1.002005-1 [11.6 kB] Get: 158 http://deb.debian.org/debian buster/main arm64 librole-tiny-perl all 2.000006-1 [19.4 kB] Get: 159 http://deb.debian.org/debian buster/main arm64 libstrictures-perl all 2.000005-1 [18.3 kB] Get: 160 http://deb.debian.org/debian buster/main arm64 libsub-quote-perl all 2.005001-1 [17.9 kB] Get: 161 http://deb.debian.org/debian buster/main arm64 libmoo-perl all 2.003004-2 [57.4 kB] Get: 162 http://deb.debian.org/debian buster/main arm64 libencode-locale-perl all 1.05-1 [13.7 kB] Get: 163 http://deb.debian.org/debian buster/main arm64 libtimedate-perl all 2.3000-2+deb10u1 [38.1 kB] Get: 164 http://deb.debian.org/debian buster/main arm64 libhttp-date-perl all 6.02-1 [10.7 kB] Get: 165 http://deb.debian.org/debian buster/main arm64 libfile-listing-perl all 6.04-1 [10.3 kB] Get: 166 http://deb.debian.org/debian buster/main arm64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get: 167 http://deb.debian.org/debian buster/main arm64 liburi-perl all 1.76-1 [89.9 kB] Get: 168 http://deb.debian.org/debian buster/main arm64 libhtml-parser-perl arm64 3.72-3+b3 [103 kB] Get: 169 http://deb.debian.org/debian buster/main arm64 libhtml-tree-perl all 5.07-2 [213 kB] Get: 170 http://deb.debian.org/debian buster/main arm64 libio-html-perl all 1.001-1 [17.6 kB] Get: 171 http://deb.debian.org/debian buster/main arm64 liblwp-mediatypes-perl all 6.02-1 [22.1 kB] Get: 172 http://deb.debian.org/debian buster/main arm64 libhttp-message-perl all 6.18-1 [77.8 kB] Get: 173 http://deb.debian.org/debian buster/main arm64 libhttp-cookies-perl all 6.04-1 [17.8 kB] Get: 174 http://deb.debian.org/debian buster/main arm64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get: 175 http://deb.debian.org/debian buster/main arm64 perl-openssl-defaults arm64 3 [6782 B] Get: 176 http://deb.debian.org/debian buster/main arm64 libnet-ssleay-perl arm64 1.85-2+b1 [303 kB] Get: 177 http://deb.debian.org/debian buster/main arm64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get: 178 http://deb.debian.org/debian buster/main arm64 libnet-http-perl all 6.18-1 [24.5 kB] Get: 179 http://deb.debian.org/debian buster/main arm64 liblwp-protocol-https-perl all 6.07-2 [9242 B] Get: 180 http://deb.debian.org/debian buster/main arm64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 181 http://deb.debian.org/debian buster/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 182 http://deb.debian.org/debian buster/main arm64 libwww-perl all 6.36-2 [188 kB] Get: 183 http://deb.debian.org/debian buster/main arm64 patchutils arm64 0.3.4-2 [84.7 kB] Get: 184 http://deb.debian.org/debian buster/main arm64 wdiff arm64 1.2.2-2+b1 [121 kB] Get: 185 http://deb.debian.org/debian buster/main arm64 devscripts arm64 2.19.5+deb10u1 [1045 kB] Get: 186 http://deb.debian.org/debian buster/main arm64 fonts-lmodern all 2.004.5-6 [4539 kB] Get: 187 http://deb.debian.org/debian buster/main arm64 unzip arm64 6.0-23+deb10u1 [166 kB] Get: 188 http://deb.debian.org/debian buster/main arm64 java-wrappers all 0.3 [10.9 kB] Get: 189 http://deb.debian.org/debian buster/main arm64 javahelper all 0.72.9 [96.4 kB] Get: 190 http://deb.debian.org/debian buster/main arm64 libapache-pom-java all 18-1 [4676 B] Get: 191 http://deb.debian.org/debian buster/main arm64 libbrotli1 arm64 1.0.7-2 [261 kB] Get: 192 http://deb.debian.org/debian buster/main arm64 libpixman-1-0 arm64 0.36.0-1 [436 kB] Get: 193 http://deb.debian.org/debian buster/main arm64 libxcb-render0 arm64 1.13.1-2 [108 kB] Get: 194 http://deb.debian.org/debian buster/main arm64 libxcb-shm0 arm64 1.13.1-2 [99.3 kB] Get: 195 http://deb.debian.org/debian buster/main arm64 libcairo2 arm64 1.16.0-4 [644 kB] Get: 196 http://deb.debian.org/debian buster/main arm64 libcommons-cli-java all 1.4-1 [55.2 kB] Get: 197 http://deb.debian.org/debian buster/main arm64 libcommons-parent-java all 43-1 [10.8 kB] Get: 198 http://deb.debian.org/debian buster/main arm64 libcommons-codec-java all 1.11-1 [271 kB] Get: 199 http://deb.debian.org/debian buster/main arm64 libcommons-io-java all 2.6-2 [213 kB] Get: 200 http://deb.debian.org/debian buster/main arm64 libcupsimage2 arm64 2.2.10-6+deb10u3 [132 kB] Get: 201 http://deb.debian.org/debian buster/main arm64 libevent-2.1-6 arm64 2.1.8-stable-4 [150 kB] Get: 202 http://deb.debian.org/debian buster/main arm64 libevent-core-2.1-6 arm64 2.1.8-stable-4 [112 kB] Get: 203 http://deb.debian.org/debian buster/main arm64 libevent-pthreads-2.1-6 arm64 2.1.8-stable-4 [47.7 kB] Get: 204 http://deb.debian.org/debian buster/main arm64 libfreemarker-java all 2.3.23-9 [1228 kB] Get: 205 http://deb.debian.org/debian buster/main arm64 libgfortran5 arm64 8.3.0-6 [298 kB] Get: 206 http://deb.debian.org/debian buster/main arm64 libgraphite2-3 arm64 1.3.13-7 [75.8 kB] Get: 207 http://deb.debian.org/debian buster/main arm64 libgs9-common all 9.27~dfsg-2+deb10u4 [5136 kB] Get: 208 http://deb.debian.org/debian buster/main arm64 libidn11 arm64 1.33-2.2 [113 kB] Get: 209 http://deb.debian.org/debian buster/main arm64 libijs-0.35 arm64 0.35-14 [17.9 kB] Get: 210 http://deb.debian.org/debian buster/main arm64 libjbig2dec0 arm64 0.16-1 [58.1 kB] Get: 211 http://deb.debian.org/debian buster/main arm64 libopenjp2-7 arm64 2.3.0-2+deb10u1 [148 kB] Get: 212 http://deb.debian.org/debian buster/main arm64 libpaper1 arm64 1.1.28 [21.1 kB] Get: 213 http://deb.debian.org/debian buster/main arm64 libjbig0 arm64 2.1-3.1+b2 [27.8 kB] Get: 214 http://deb.debian.org/debian buster/main arm64 libwebp6 arm64 0.6.1-2 [233 kB] Get: 215 http://deb.debian.org/debian buster/main arm64 libtiff5 arm64 4.1.0+git191117-2~deb10u1 [259 kB] Get: 216 http://deb.debian.org/debian buster/main arm64 libgs9 arm64 9.27~dfsg-2+deb10u4 [2027 kB] Get: 217 http://deb.debian.org/debian buster/main arm64 libharfbuzz0b arm64 2.3.1-1 [1155 kB] Get: 218 http://deb.debian.org/debian buster/main arm64 libharfbuzz-icu0 arm64 2.3.1-1 [834 kB] Get: 219 http://deb.debian.org/debian buster/main arm64 libltdl7 arm64 2.4.6-9 [389 kB] Get: 220 http://deb.debian.org/debian buster/main arm64 libpciaccess0 arm64 0.14-1 [51.0 kB] Get: 221 http://deb.debian.org/debian buster/main arm64 ocl-icd-libopencl1 arm64 2.2.12-2 [37.4 kB] Get: 222 http://deb.debian.org/debian buster/main arm64 libnuma1 arm64 2.0.12-1 [25.6 kB] Get: 223 http://deb.debian.org/debian buster/main arm64 libhwloc5 arm64 1.11.12-3 [97.9 kB] Get: 224 http://deb.debian.org/debian buster/main arm64 libhwloc-plugins arm64 1.11.12-3 [16.9 kB] Get: 225 http://deb.debian.org/debian buster/main arm64 libnl-3-200 arm64 3.4.0-1 [54.9 kB] Get: 226 http://deb.debian.org/debian buster/main arm64 libnl-route-3-200 arm64 3.4.0-1 [134 kB] Get: 227 http://deb.debian.org/debian buster/main arm64 libibverbs1 arm64 22.1-1 [47.8 kB] Get: 228 http://deb.debian.org/debian buster/main arm64 libice6 arm64 2:1.0.9-2 [52.0 kB] Get: 229 http://deb.debian.org/debian buster/main arm64 libjcommon-java all 1.0.23-1 [466 kB] Get: 230 http://deb.debian.org/debian buster/main arm64 libjfreechart-java all 1.0.19-2 [1566 kB] Get: 231 http://deb.debian.org/debian buster/main arm64 libkpathsea6 arm64 2018.20181218.49446-1 [164 kB] Get: 232 http://deb.debian.org/debian buster/main arm64 liblog4j1.2-java all 1.2.17-8+deb10u1 [438 kB] Get: 233 http://deb.debian.org/debian buster/main arm64 libmpj-java all 0.44+dfsg-4 [447 kB] Get: 234 http://deb.debian.org/debian buster/main arm64 libpmix2 arm64 3.1.2-3 [455 kB] Get: 235 http://deb.debian.org/debian buster/main arm64 libopenmpi3 arm64 3.1.3-11 [1996 kB] Get: 236 http://deb.debian.org/debian buster/main arm64 libpal-java all 1.5.1+dfsg-5 [690 kB] Get: 237 http://deb.debian.org/debian buster/main arm64 libpaper-utils arm64 1.1.28 [18.0 kB] Get: 238 http://deb.debian.org/debian buster/main arm64 libpotrace0 arm64 1.15-1 [23.6 kB] Get: 239 http://deb.debian.org/debian buster/main arm64 libptexenc1 arm64 2018.20181218.49446-1 [60.3 kB] Get: 240 http://deb.debian.org/debian buster/main arm64 libsm6 arm64 2:1.2.3-1 [34.0 kB] Get: 241 http://deb.debian.org/debian buster/main arm64 libsynctex2 arm64 2018.20181218.49446-1 [77.8 kB] Get: 242 http://deb.debian.org/debian buster/main arm64 libteckit0 arm64 2.5.8+ds2-5 [284 kB] Get: 243 http://deb.debian.org/debian buster/main arm64 libtexlua52 arm64 2018.20181218.49446-1 [107 kB] Get: 244 http://deb.debian.org/debian buster/main arm64 libtexlua53 arm64 2018.20181218.49446-1 [118 kB] Get: 245 http://deb.debian.org/debian buster/main arm64 libwoff1 arm64 1.0.2-1 [40.7 kB] Get: 246 http://deb.debian.org/debian buster/main arm64 libxt6 arm64 1:1.1.5-1+b3 [175 kB] Get: 247 http://deb.debian.org/debian buster/main arm64 libxmu6 arm64 2:1.1.2-2+b3 [57.8 kB] Get: 248 http://deb.debian.org/debian buster/main arm64 libxpm4 arm64 1:3.5.12-1 [43.9 kB] Get: 249 http://deb.debian.org/debian buster/main arm64 libxaw7 arm64 2:1.0.13-1+b2 [167 kB] Get: 250 http://deb.debian.org/debian buster/main arm64 libxxhash0 arm64 0.6.5-2 [7684 B] Get: 251 http://deb.debian.org/debian buster/main arm64 libzzip-0-13 arm64 0.13.62-3.2 [55.5 kB] Get: 252 http://deb.debian.org/debian buster/main arm64 openmpi-common all 3.1.3-11 [165 kB] Get: 253 http://deb.debian.org/debian buster/main arm64 openmpi-bin arm64 3.1.3-11 [199 kB] Get: 254 http://deb.debian.org/debian buster/main arm64 phyml arm64 3:3.3.20180621-2 [1561 kB] Get: 255 http://deb.debian.org/debian buster/main arm64 prottest all 3.4.2+dfsg-3 [345 kB] Get: 256 http://deb.debian.org/debian buster/main arm64 t1utils arm64 1.41-3 [59.7 kB] Get: 257 http://deb.debian.org/debian buster/main arm64 texlive-binaries arm64 2018.20181218.49446-1 [8464 kB] Get: 258 http://deb.debian.org/debian buster/main arm64 xdg-utils all 1.1.3-1+deb10u1 [73.7 kB] Get: 259 http://deb.debian.org/debian buster/main arm64 texlive-base all 2018.20190227-2 [19.7 MB] Get: 260 http://deb.debian.org/debian buster/main arm64 texlive-fonts-recommended all 2018.20190227-2 [5228 kB] Get: 261 http://deb.debian.org/debian buster/main arm64 texlive-latex-base all 2018.20190227-2 [984 kB] Get: 262 http://deb.debian.org/debian buster/main arm64 texlive-latex-recommended all 2018.20190227-2 [15.2 MB] Fetched 390 MB in 38s (10.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_arm64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package poppler-data. Preparing to unpack .../06-poppler-data_0.4.9-2_all.deb ... Unpacking poppler-data (0.4.9-2) ... Selecting previously unselected package libssl1.1:arm64. Preparing to unpack .../07-libssl1.1_1.1.1d-0+deb10u3_arm64.deb ... Unpacking libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Selecting previously unselected package libpython3.7-minimal:arm64. Preparing to unpack .../08-libpython3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../09-libexpat1_2.2.6-2+deb10u1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.6-2+deb10u1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../10-python3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7-minimal (3.7.3-2+deb10u2) ... Setting up libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Setting up libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Setting up libexpat1:arm64 (2.2.6-2+deb10u1) ... Setting up python3.7-minimal (3.7.3-2+deb10u2) ... Selecting previously unselected package python3-minimal. (Reading database ... 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Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:arm64. Preparing to unpack .../4-libreadline7_7.0-5_arm64.deb ... Unpacking libreadline7:arm64 (7.0-5) ... Selecting previously unselected package libpython3.7-stdlib:arm64. Preparing to unpack .../5-libpython3.7-stdlib_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7. Preparing to unpack .../6-python3.7_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7 (3.7.3-2+deb10u2) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../7-libpython3-stdlib_3.7.3-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.7.3-1) ... Setting up python3-minimal (3.7.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21042 files and directories currently installed.) Preparing to unpack .../000-python3_3.7.3-1_arm64.deb ... Unpacking python3 (3.7.3-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../002-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../003-tex-common_6.11_all.deb ... Unpacking tex-common (6.11) ... Selecting previously unselected package netbase. Preparing to unpack .../004-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../006-libmagic1_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.19.8.1-9_arm64.deb ... Unpacking gettext-base (0.19.8.1-9) ... 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Selecting previously unselected package openssh-client. Preparing to unpack .../015-openssh-client_1%3a7.9p1-10+deb10u2_arm64.deb ... Unpacking openssh-client (1:7.9p1-10+deb10u2) ... Selecting previously unselected package openssl. Preparing to unpack .../016-openssl_1.1.1d-0+deb10u3_arm64.deb ... Unpacking openssl (1.1.1d-0+deb10u3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../017-ca-certificates_20190110_all.deb ... Unpacking ca-certificates (20190110) ... Selecting previously unselected package libnspr4:arm64. Preparing to unpack .../018-libnspr4_2%3a4.20-1_arm64.deb ... Unpacking libnspr4:arm64 (2:4.20-1) ... Selecting previously unselected package libnss3:arm64. Preparing to unpack .../019-libnss3_2%3a3.42.1-1+deb10u3_arm64.deb ... Unpacking libnss3:arm64 (2:3.42.1-1+deb10u3) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../020-ca-certificates-java_20190405_all.deb ... Unpacking ca-certificates-java (20190405) ... Selecting previously unselected package java-common. Preparing to unpack .../021-java-common_0.71_all.deb ... Unpacking java-common (0.71) ... Selecting previously unselected package libavahi-common-data:arm64. Preparing to unpack .../022-libavahi-common-data_0.7-4+b1_arm64.deb ... Unpacking libavahi-common-data:arm64 (0.7-4+b1) ... Selecting previously unselected package libavahi-common3:arm64. Preparing to unpack .../023-libavahi-common3_0.7-4+b1_arm64.deb ... Unpacking libavahi-common3:arm64 (0.7-4+b1) ... Selecting previously unselected package libdbus-1-3:arm64. Preparing to unpack .../024-libdbus-1-3_1.12.20-0+deb10u1_arm64.deb ... Unpacking libdbus-1-3:arm64 (1.12.20-0+deb10u1) ... Selecting previously unselected package libavahi-client3:arm64. Preparing to unpack .../025-libavahi-client3_0.7-4+b1_arm64.deb ... Unpacking libavahi-client3:arm64 (0.7-4+b1) ... Selecting previously unselected package libcups2:arm64. Preparing to unpack .../026-libcups2_2.2.10-6+deb10u3_arm64.deb ... Unpacking libcups2:arm64 (2.2.10-6+deb10u3) ... Selecting previously unselected package liblcms2-2:arm64. Preparing to unpack .../027-liblcms2-2_2.9-3_arm64.deb ... Unpacking liblcms2-2:arm64 (2.9-3) ... Selecting previously unselected package libjpeg62-turbo:arm64. Preparing to unpack .../028-libjpeg62-turbo_1%3a1.5.2-2+b1_arm64.deb ... Unpacking libjpeg62-turbo:arm64 (1:1.5.2-2+b1) ... Selecting previously unselected package libpng16-16:arm64. Preparing to unpack .../029-libpng16-16_1.6.36-6_arm64.deb ... Unpacking libpng16-16:arm64 (1.6.36-6) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../030-libfreetype6_2.9.1-3+deb10u1_arm64.deb ... Unpacking libfreetype6:arm64 (2.9.1-3+deb10u1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../031-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../032-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../033-libfontconfig1_2.13.1-2_arm64.deb ... Unpacking libfontconfig1:arm64 (2.13.1-2) ... Selecting previously unselected package libasound2-data. Preparing to unpack .../034-libasound2-data_1.1.8-1_all.deb ... Unpacking libasound2-data (1.1.8-1) ... Selecting previously unselected package libasound2:arm64. Preparing to unpack .../035-libasound2_1.1.8-1_arm64.deb ... Unpacking libasound2:arm64 (1.1.8-1) ... Selecting previously unselected package libpcsclite1:arm64. Preparing to unpack .../036-libpcsclite1_1.8.24-1_arm64.deb ... Unpacking libpcsclite1:arm64 (1.8.24-1) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../037-libxau6_1%3a1.0.8-1+b2_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../038-libxdmcp6_1%3a1.1.2-3_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../039-libxcb1_1.13.1-2_arm64.deb ... Unpacking libxcb1:arm64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../040-libx11-data_2%3a1.6.7-1+deb10u1_all.deb ... Unpacking libx11-data (2:1.6.7-1+deb10u1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../041-libx11-6_2%3a1.6.7-1+deb10u1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.6.7-1+deb10u1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../042-libxext6_2%3a1.3.3-1+b2_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.3-1+b2) ... Selecting previously unselected package libxi6:arm64. Preparing to unpack .../043-libxi6_2%3a1.7.9-1_arm64.deb ... Unpacking libxi6:arm64 (2:1.7.9-1) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../044-libxrender1_1%3a0.9.10-1_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.10-1) ... Selecting previously unselected package lsb-base. Preparing to unpack .../045-lsb-base_10.2019051400_all.deb ... Unpacking lsb-base (10.2019051400) ... Selecting previously unselected package x11-common. Preparing to unpack .../046-x11-common_1%3a7.7+19_all.deb ... Unpacking x11-common (1:7.7+19) ... Selecting previously unselected package libxtst6:arm64. Preparing to unpack .../047-libxtst6_2%3a1.2.3-1_arm64.deb ... Unpacking libxtst6:arm64 (2:1.2.3-1) ... Selecting previously unselected package openjdk-11-jre-headless:arm64. Preparing to unpack .../048-openjdk-11-jre-headless_11.0.8+10-1~deb10u1_arm64.deb ... Unpacking openjdk-11-jre-headless:arm64 (11.0.8+10-1~deb10u1) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../049-default-jre-headless_2%3a1.11-71_arm64.deb ... 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Setting up libxcb-present0:arm64 (1.13.1-2) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 128 added, 0 removed; done. Setting up libptexenc1:arm64 (2018.20181218.49446-1) ... Setting up libfreetype6:arm64 (2.9.1-3+deb10u1) ... Setting up libxcb-sync1:arm64 (1.13.1-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-3) ... Setting up libcroco3:arm64 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up libxcb-dri2-0:arm64 (1.13.1-2) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:arm64 (2.4.97-1) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up gpgconf (2.2.12-1+deb10u1) ... Setting up libllvm7:arm64 (1:7.0.1-8+deb10u2) ... Setting up libx11-6:arm64 (2:1.6.7-1+deb10u1) ... Setting up libharfbuzz0b:arm64 (2.3.1-1) ... Setting up libcommons-codec-java (1.11-1) ... Setting up libsm6:arm64 (2:1.2.3-1) ... Setting up libavahi-client3:arm64 (0.7-4+b1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.12-1+deb10u1) ... Setting up libpython3-stdlib:arm64 (3.7.3-1) ... Setting up libhttp-message-perl (6.18-1) ... Setting up libdrm-amdgpu1:arm64 (2.4.97-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:arm64 (1.13.1-2) ... Setting up libpaper1:arm64 (1.1.28) ... Creating config file /etc/papersize with new version Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libibverbs1:arm64 (22.1-1) ... Setting up libdrm-nouveau2:arm64 (2.4.97-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libharfbuzz-icu0:arm64 (2.3.1-1) ... Setting up libdrm-etnaviv1:arm64 (2.4.97-1) ... Setting up gpg-agent (2.2.12-1+deb10u1) ... Setting up libxpm4:arm64 (1:3.5.12-1) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up libpmix2:arm64 (3.1.2-3) ... Setting up libhttp-cookies-perl (6.04-1) ... Setting up libcommons-io-java (2.6-2) ... Setting up libdrm-radeon1:arm64 (2.4.97-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libopenmpi3:arm64 (3.1.3-11) ... Setting up libparams-classify-perl (0.015-1+b1) ... Setting up gpgsm (2.2.12-1+deb10u1) ... Setting up libgl1-mesa-dri:arm64 (18.3.6-2+deb10u1) ... Setting up libxext6:arm64 (2:1.3.3-1+b2) ... Setting up python3 (3.7.3-1) ... Setting up libpaper-utils (1.1.28) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxxf86vm1:arm64 (1:1.1.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libmpj-java (0.44+dfsg-4) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up dirmngr (2.2.12-1+deb10u1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libxfixes3:arm64 (1:5.0.3-1) ... Setting up libxt6:arm64 (1:1.1.5-1+b3) ... Setting up gpg-wks-server (2.2.12-1+deb10u1) ... Setting up libcups2:arm64 (2.2.10-6+deb10u3) ... Setting up libfontconfig1:arm64 (2.13.1-2) ... Setting up openmpi-bin (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up phyml (3:3.3.20180621-2) ... Setting up libxmu6:arm64 (2:1.1.2-2+b3) ... Setting up libxdamage1:arm64 (1:1.1.4-3+b3) ... Setting up libxi6:arm64 (2:1.7.9-1) ... Setting up gpg-wks-client (2.2.12-1+deb10u1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libxtst6:arm64 (2:1.2.3-1) ... Setting up libmoo-perl (2.003004-2) ... Setting up po-debconf (1.0.21) ... Setting up libxaw7:arm64 (2:1.0.13-1+b2) ... Setting up libcairo2:arm64 (1.16.0-4) ... Setting up libcupsimage2:arm64 (2.2.10-6+deb10u3) ... Setting up gnupg (2.2.12-1+deb10u1) ... Setting up libglx-mesa0:arm64 (18.3.6-2+deb10u1) ... Setting up libgs9:arm64 (9.27~dfsg-2+deb10u4) ... Setting up libglx0:arm64 (1.1.0-1) ... Setting up libgl1:arm64 (1.1.0-1) ... Setting up texlive-binaries (2018.20181218.49446-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2018.20190227-2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up texlive-latex-base (2018.20190227-2) ... Setting up texlive-latex-recommended (2018.20190227-2) ... Setting up texlive-fonts-recommended (2018.20190227-2) ... Setting up default-jre-headless (2:1.11-71) ... Setting up libwww-perl (6.36-2) ... Setting up openjdk-11-jre-headless:arm64 (11.0.8+10-1~deb10u1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up openjdk-11-jre:arm64 (11.0.8+10-1~deb10u1) ... Setting up openjdk-11-jdk-headless:arm64 (11.0.8+10-1~deb10u1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jaotc to provide /usr/bin/jaotc (jaotc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre (2:1.11-71) ... Setting up dh-autoreconf (19) ... Setting up default-jdk-headless (2:1.11-71) ... Setting up devscripts (2.19.5+deb10u1) ... Setting up ant (1.10.5-2) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up openjdk-11-jdk:arm64 (11.0.8+10-1~deb10u1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up ca-certificates-java (20190405) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:thawte_Primary_Root_CA_-_G3.pem Adding debian:thawte_Primary_Root_CA_-_G2.pem Adding debian:thawte_Primary_Root_CA.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:TrustCor_ECA-1.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Taiwan_GRCA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Secure_Global_CA.pem Adding debian:SecureTrust_CA.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:LuxTrust_Global_Root_2.pem Adding debian:Izenpe.com.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:ISRG_Root_X1.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:GeoTrust_Universal_CA.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:GeoTrust_Primary_Certification_Authority.pem Adding debian:GeoTrust_Global_CA.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:EC-ACC.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:Deutsche_Telekom_Root_CA_2.pem Adding debian:DST_Root_CA_X3.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certplus_Class_2_Primary_CA.pem Adding debian:Certinomis_-_Root_CA.pem Adding debian:Certigna.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AddTrust_External_Root.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:ACCVRAIZ1.pem done. Setting up alter-sequence-alignment (1.3.4-2) ... Setting up liblwp-protocol-https-perl (6.07-2) ... Setting up debhelper (12.1.1) ... Setting up default-jdk (2:1.11-71) ... Setting up prottest (3.4.2+dfsg-3) ... Setting up javahelper (0.72.9) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Processing triggers for tex-common (6.11) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/jmodeltest-2.1.10+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package jmodeltest dpkg-buildpackage: info: source version 2.1.10+dfsg-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with javahelper dh_auto_clean ant clean Buildfile: /build/jmodeltest-2.1.10+dfsg/build.xml clean: BUILD SUCCESSFUL Total time: 2 seconds jh_clean dh_clean debian/rules build dh build --with javahelper dh_update_autotools_config dh_autoreconf dh_auto_configure jh_linkjars debian/rules override_dh_auto_build make[1]: Entering directory '/build/jmodeltest-2.1.10+dfsg' dh_auto_build ant -Duser.name debian Buildfile: /build/jmodeltest-2.1.10+dfsg/build.xml compile: [mkdir] Created dir: /build/jmodeltest-2.1.10+dfsg/build/classes [javac] Compiling 75 source files to /build/jmodeltest-2.1.10+dfsg/build/classes [javac] warning: [path] bad path element "/usr/share/java/xalan.jar": no such file or directory [javac] warning: [path] bad path element "/usr/share/java/AbsoluteLayout.jar": no such file or directory [javac] warning: [options] bootstrap class path not set in conjunction with -source 6 [javac] warning: [options] source value 6 is obsolete and will be removed in a future release [javac] warning: [options] target value 1.6 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/Distributor.java:23: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlMPJ.java:24: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlMPJ.java:25: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:28: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:29: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/MultipleDistributor.java:24: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlHybrid.java:24: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlHybrid.java:25: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlParallelModel.java:23: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlParallelModel.java:24: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlSingleModel.java:24: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlClustering.java:22: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlClustering.java:23: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlThread.java:23: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlThread.java:24: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/gui/Frame_Progress.java:35: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/gui/Frame_Progress.java:36: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/observer/ConsoleProgressObserver.java:27: warning: [deprecation] Observable in java.util has been deprecated [javac] import java.util.Observable; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/observer/ConsoleProgressObserver.java:28: warning: [deprecation] Observer in java.util has been deprecated [javac] import java.util.Observer; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/ModelTest.java:1049: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] new Integer(numberOfThreads)); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/Distributor.java:35: warning: [deprecation] Observable in java.util has been deprecated [javac] public class Distributor extends Observable implements Runnable { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:56: warning: [deprecation] Observable in java.util has been deprecated [javac] public abstract class RunPhyml extends Observable implements Observer { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:56: warning: [deprecation] Observer in java.util has been deprecated [javac] public abstract class RunPhyml extends Observable implements Observer { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:83: warning: [deprecation] Observer in java.util has been deprecated [javac] protected Observer progress; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:197: warning: [deprecation] Observer in java.util has been deprecated [javac] public RunPhyml(Observer progress, ApplicationOptions options, [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhyml.java:474: warning: [deprecation] Observable in java.util has been deprecated [javac] public void update(Observable o, Object arg) { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlMPJ.java:56: warning: [deprecation] Observer in java.util has been deprecated [javac] public RunPhymlMPJ(Observer progress, ApplicationOptions options, [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlMPJ.java:199: warning: [deprecation] Observable in java.util has been deprecated [javac] public void update(Observable o, Object arg) { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/MultipleDistributor.java:37: warning: [deprecation] Observable in java.util has been deprecated [javac] public class MultipleDistributor extends Observable implements Runnable { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlHybrid.java:54: warning: [deprecation] Observer in java.util has been deprecated [javac] public RunPhymlHybrid(Observer progress, ApplicationOptions options, [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlHybrid.java:62: warning: [deprecation] Observer in java.util has been deprecated [javac] public RunPhymlHybrid(int mpjMe, int mpjSize, Observer progress, [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlHybrid.java:288: warning: [deprecation] Observable in java.util has been deprecated [javac] public void update(Observable o, Object arg) { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlParallelModel.java:32: warning: [deprecation] Observable in java.util has been deprecated [javac] public class PhymlParallelModel extends Observable implements Observer { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlParallelModel.java:32: warning: [deprecation] Observer in java.util has been deprecated [javac] public class PhymlParallelModel extends Observable implements Observer { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlParallelModel.java:100: warning: [deprecation] Observable in java.util has been deprecated [javac] public void update(Observable o, Object arg) { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/PhymlSingleModel.java:34: warning: [deprecation] Observable in java.util has been deprecated [javac] public class PhymlSingleModel extends Observable implements Runnable { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlClustering.java:42: warning: [deprecation] Observer in java.util has been deprecated [javac] public RunPhymlClustering(Observer progress, ApplicationOptions options, [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlClustering.java:123: warning: [deprecation] Observable in java.util has been deprecated [javac] public void update(Observable o, Object arg) { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlThread.java:46: warning: [deprecation] Observer in java.util has been deprecated [javac] public RunPhymlThread(Observer progress, ApplicationOptions options, [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/RunPhymlThread.java:176: warning: [deprecation] Observable in java.util has been deprecated [javac] public void update(Observable o, Object arg) { [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:62: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][0] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:66: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][3] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:68: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][4] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:72: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][5] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:75: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][6] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:78: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][7] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:81: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][8] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:92: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][9] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:99: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][10] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:101: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][11] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:103: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][12] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:105: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][13] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:107: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][14] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:109: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][15] = new Double(1); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:176: warning: [deprecation] ROUND_HALF_UP in BigDecimal has been deprecated [javac] bd = bd.setScale(decimalPlace, BigDecimal.ROUND_HALF_UP); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:176: warning: [deprecation] setScale(int,int) in BigDecimal has been deprecated [javac] bd = bd.setScale(decimalPlace, BigDecimal.ROUND_HALF_UP); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:187: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][0] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:191: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][3] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:193: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][4] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:195: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][5] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:197: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][6] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:199: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][7] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:201: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][8] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:205: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][9] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:214: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][0] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:218: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][3] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:220: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][4] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:222: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][5] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:224: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][6] = new Double( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:227: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][7] = new Double( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:230: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][8] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:234: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][9] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:243: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][0] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:247: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][3] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:249: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][4] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:251: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][5] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:253: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][6] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:255: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][7] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:257: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][8] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:261: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][9] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:270: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][0] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:274: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][3] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:276: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] data[i][4] = new Integer( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:278: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][5] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:280: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][6] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:282: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][7] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:284: warning: [deprecation] Double(double) in Double has been deprecated [javac] data[i][8] = new Double(Round( [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/TableSorter.java:317: warning: [deprecation] getModifiers() in InputEvent has been deprecated [javac] int shiftPressed = e.getModifiers()&InputEvent.SHIFT_MASK; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/TableSorter.java:317: warning: [deprecation] SHIFT_MASK in InputEvent has been deprecated [javac] int shiftPressed = e.getModifiers()&InputEvent.SHIFT_MASK; [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:55: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] whichValue = new Integer(ModelTest.getMinAIC().getId()); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:57: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] whichValue = new Integer(ModelTest.getMinAICc().getId()); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:59: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] whichValue = new Integer(ModelTest.getMinBIC().getId()); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:61: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] whichValue = new Integer(ModelTest.getMinDT().getId()); [javac] ^ [javac] /build/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:63: warning: [deprecation] Integer(int) in Integer has been deprecated [javac] whichValue = new Integer(0); [javac] ^ [javac] Note: Some input files additionally use or override a deprecated API. [javac] 100 warnings jar: [mkdir] Created dir: /build/jmodeltest-2.1.10+dfsg/dist [jar] Building jar: /build/jmodeltest-2.1.10+dfsg/dist/jModelTest.jar [mkdir] Created dir: /build/jmodeltest-2.1.10+dfsg/dist/lib [copy] Copying 32 files to /build/jmodeltest-2.1.10+dfsg/dist/lib [copy] Copying 34 files to /build/jmodeltest-2.1.10+dfsg/dist [mkdir] Created dir: /build/jmodeltest-2.1.10+dfsg/dist/log BUILD SUCCESSFUL Total time: 42 seconds cd manual && pdflatex manual.tex && bibtex manual && pdflatex manual.tex && pdflatex manual.tex This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./manual.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/pslatex/pslatex.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/palatino.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/avant.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) No file manual.aux. 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This is BibTeX, Version 0.99d (TeX Live 2019/dev/Debian) The top-level auxiliary file: manual.aux A level-1 auxiliary file: changelog.aux A level-1 auxiliary file: sec-quickstart.aux A level-1 auxiliary file: sec-arguments.aux A level-1 auxiliary file: sec-config.aux A level-1 auxiliary file: sec-theory.aux The style file: plainnat.bst Database file #1: biblio.bib Warning--empty journal in Posada-2003 (There was 1 warning) This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2019/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./manual.tex LaTeX2e <2018-12-01> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2018/09/03 v1.4i Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/pslatex/pslatex.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/palatino.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/avant.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (./manual.aux (./changelog.aux) (./sec-quickstart.aux) (./sec-arguments.aux) (./sec-config.aux) (./sec-theory.aux)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspzccm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ppl.fd) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./manual.out) (./manual.out) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptmcm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omlptmcm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omxpsycm.fd) (./manual.toc) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsppl.fd) [2] (./changelog.tex [3]) [4] (./sec-quickstart.tex Overfull \hbox (70.9968pt too wide) in paragraph at lines 5--6 \OT1/ppl/m/n/10 tributed for Win-dows, Linux and OsX, and it is even pos-si-ble to down-load PhyML sources (http://code.google.com/p/phyml) [5 <./images/main-window.pdf>] [6 <./images/lkl-settings.pdf> <./images/bic.pdf pdfTeX warning: pdflatex (file ./images/bic.pdf): PDF inclusion: multiple pdfs with page group included in a single page >] Underfull \vbox (badness 10000) has occurred while \output is active [7 <./imag es/results.pdf> <./images/consensus.pdf pdfTeX warning: pdflatex (file ./images/consensus.pdf): PDF inclusion: multiple pdfs with page group included in a single page >] [8 <./images/html-log.pdf>] [9] [10] [11]) [12] Underfull \vbox (badness 10000) has occurred while \output is active [13] [14] (./sec-arguments.tex [15] [16]) [17] (./sec-config.tex [18] [19]) [20] [21] [22] (./sec-theory.tex Package natbib Warning: Citation `Felsenstein-1988' on page 23 undefined on inp ut line 3. 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Transcript written on manual.log. make[1]: Leaving directory '/build/jmodeltest-2.1.10+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with javahelper dh_testroot dh_prep dh_installdirs dh_auto_install dh_install jh_installjavadoc dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/jmodeltest-2.1.10+dfsg' dh_installchangelogs dist/CHANGELOG make[1]: Leaving directory '/build/jmodeltest-2.1.10+dfsg' dh_installman dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/jmodeltest-2.1.10+dfsg' dh_compress --exclude=.pdf make[1]: Leaving directory '/build/jmodeltest-2.1.10+dfsg' dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'jmodeltest' in '../jmodeltest_2.1.10+dfsg-7_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../jmodeltest_2.1.10+dfsg-7_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: user script /srv/workspace/pbuilder/3791/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3791/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3791 and its subdirectories I: Current time: Sun Oct 4 14:15:42 +14 2020 I: pbuilder-time-stamp: 1601770542